Miyakogusa Predicted Gene
- Lj5g3v2056240.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2056240.2 Non Chatacterized Hit- tr|I3SY33|I3SY33_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,seg,NULL;
VACUOLE MEMBRANE PROTEIN 1,NULL; MEMBRANE-ASSOCIATED PROGESTERONE
RECEPTOR COMPONENT-RELAT,CUFF.56560.2
(412 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14950.3 | Symbols: | SNARE associated Golgi protein family ... 518 e-147
AT4G14950.1 | Symbols: | SNARE associated Golgi protein family ... 518 e-147
AT1G05360.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 487 e-138
AT4G14950.2 | Symbols: | SNARE associated Golgi protein family ... 448 e-126
>AT4G14950.3 | Symbols: | SNARE associated Golgi protein family |
chr4:8545551-8547722 FORWARD LENGTH=406
Length = 406
Score = 518 bits (1335), Expect = e-147, Method: Compositional matrix adjust.
Identities = 244/396 (61%), Positives = 299/396 (75%), Gaps = 5/396 (1%)
Query: 21 LHKKHQXXXXXXXXXXQPFKTLKFFTFSVIQYLKKTAFYXXXXXXXXXXXSFVVGALGIM 80
L +KH+ QP TLK F + IQY+K++ Y + ++ G +
Sbjct: 8 LREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGGWFILITTLLVVSGGL 67
Query: 81 LITFDGPHEKHLEELLKYFRFGLWWVVXXXXXXXXXXXXXHTFVLYLGPHIAFFTLKAMQ 140
L+T DGPH KH+EE+L+Y R+GLWW+ HTFVLYLGPHIA FTLKA
Sbjct: 68 LVTVDGPHGKHVEEVLEYVRYGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFTLKATL 127
Query: 141 CGRVDLKSAPYDTIQLDRGPSWLDKDCSQFGPPLL--EYSSHIPLSSILSQVVLEAVLWG 198
CGRVDLKSAPYDTIQL R PSWLDK CS+FGPPL+ S +PL+SIL QV LEA+LWG
Sbjct: 128 CGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLEAILWG 187
Query: 199 MGTAIGELPPYFISRAARLSGSKLDSIEELD---TENNGIMATYVNKIKRWFLSHTQHLN 255
+GTA+GELPPYFISRAA +SGS +D +EELD TE++G MAT++N++KRW L+H+QHLN
Sbjct: 188 IGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTHSQHLN 247
Query: 256 FLTIMALASVPNPLFDLAGIMCGQFGIPFWKFFLATFIGKAIIKTHIQTVFIISVCNNQL 315
F T++ LASVPNPLFDLAGIMCGQFGIPFW+FFLAT IGKAIIKTHIQT+FII VCNNQL
Sbjct: 248 FFTVLVLASVPNPLFDLAGIMCGQFGIPFWEFFLATLIGKAIIKTHIQTIFIICVCNNQL 307
Query: 316 LNWIENEFIWVLGHIPGFESILPSLIAKLHAAKDKYLKASHPVSPNIQGKKWDFSIASVW 375
L+W+ENE IW+L H+PG S+LP L AKLHA K+KY+ A PV +I+ KKWDFS AS+W
Sbjct: 308 LDWMENELIWILSHVPGLASMLPGLTAKLHAMKEKYIDAPSPVPSHIKVKKWDFSFASIW 367
Query: 376 NTVVWLMLMNFFVKIVNSTAQSYVKKQQEKELAAST 411
N +VWLML+NFFVKIV +TAQ ++KK+QEKE+A T
Sbjct: 368 NGIVWLMLLNFFVKIVTATAQRHLKKKQEKEMATLT 403
>AT4G14950.1 | Symbols: | SNARE associated Golgi protein family |
chr4:8545517-8547722 FORWARD LENGTH=416
Length = 416
Score = 518 bits (1334), Expect = e-147, Method: Compositional matrix adjust.
Identities = 244/396 (61%), Positives = 299/396 (75%), Gaps = 5/396 (1%)
Query: 21 LHKKHQXXXXXXXXXXQPFKTLKFFTFSVIQYLKKTAFYXXXXXXXXXXXSFVVGALGIM 80
L +KH+ QP TLK F + IQY+K++ Y + ++ G +
Sbjct: 18 LREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGGWFILITTLLVVSGGL 77
Query: 81 LITFDGPHEKHLEELLKYFRFGLWWVVXXXXXXXXXXXXXHTFVLYLGPHIAFFTLKAMQ 140
L+T DGPH KH+EE+L+Y R+GLWW+ HTFVLYLGPHIA FTLKA
Sbjct: 78 LVTVDGPHGKHVEEVLEYVRYGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFTLKATL 137
Query: 141 CGRVDLKSAPYDTIQLDRGPSWLDKDCSQFGPPLL--EYSSHIPLSSILSQVVLEAVLWG 198
CGRVDLKSAPYDTIQL R PSWLDK CS+FGPPL+ S +PL+SIL QV LEA+LWG
Sbjct: 138 CGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLEAILWG 197
Query: 199 MGTAIGELPPYFISRAARLSGSKLDSIEELD---TENNGIMATYVNKIKRWFLSHTQHLN 255
+GTA+GELPPYFISRAA +SGS +D +EELD TE++G MAT++N++KRW L+H+QHLN
Sbjct: 198 IGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTHSQHLN 257
Query: 256 FLTIMALASVPNPLFDLAGIMCGQFGIPFWKFFLATFIGKAIIKTHIQTVFIISVCNNQL 315
F T++ LASVPNPLFDLAGIMCGQFGIPFW+FFLAT IGKAIIKTHIQT+FII VCNNQL
Sbjct: 258 FFTVLVLASVPNPLFDLAGIMCGQFGIPFWEFFLATLIGKAIIKTHIQTIFIICVCNNQL 317
Query: 316 LNWIENEFIWVLGHIPGFESILPSLIAKLHAAKDKYLKASHPVSPNIQGKKWDFSIASVW 375
L+W+ENE IW+L H+PG S+LP L AKLHA K+KY+ A PV +I+ KKWDFS AS+W
Sbjct: 318 LDWMENELIWILSHVPGLASMLPGLTAKLHAMKEKYIDAPSPVPSHIKVKKWDFSFASIW 377
Query: 376 NTVVWLMLMNFFVKIVNSTAQSYVKKQQEKELAAST 411
N +VWLML+NFFVKIV +TAQ ++KK+QEKE+A T
Sbjct: 378 NGIVWLMLLNFFVKIVTATAQRHLKKKQEKEMATLT 413
>AT1G05360.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: SNARE associated Golgi protein family
(TAIR:AT4G14950.1); Has 332 Blast hits to 326 proteins
in 115 species: Archae - 0; Bacteria - 11; Metazoa -
174; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 73 (source: NCBI BLink). |
chr1:1564816-1567278 FORWARD LENGTH=416
Length = 416
Score = 487 bits (1253), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/392 (60%), Positives = 282/392 (71%), Gaps = 2/392 (0%)
Query: 21 LHKKHQXXXXXXXXXXQPFKTLKFFTFSVIQYLKKTAFYXXXXXXXXXXXSFVVGALGIM 80
L +KHQ QPFKTL+ F +V Y+++ + Y + A +
Sbjct: 17 LREKHQQDLEKLTLTSQPFKTLRLFVVAVFLYVRRWSSYLLANVGWLILFCSIFVAFAAL 76
Query: 81 LITFDGPHEKHLEELLKYFRFGLWWVVXXXXXXXXXXXXXHTFVLYLGPHIAFFTLKAMQ 140
L+T DGPH KH+EEL +Y RFGLWW+ HTFVLYLGPHIA FT+K MQ
Sbjct: 77 LVTLDGPHVKHVEELSEYTRFGLWWIFLGVASSIGLGSGLHTFVLYLGPHIALFTIKVMQ 136
Query: 141 CGRVDLKSAPYDTIQLDRGPSWLDKDCSQFGPPLLEYSSHIPLSSILSQVVLEAVLWGMG 200
CGRVDLKSA YDTIQL R PSWLDK C +FG P+ +SS +PLSSIL QV +EA+LWG+G
Sbjct: 137 CGRVDLKSAIYDTIQLKRSPSWLDKPCHEFGSPV--FSSGVPLSSILPQVQIEAILWGLG 194
Query: 201 TAIGELPPYFISRAARLSGSKLDSIEELDTENNGIMATYVNKIKRWFLSHTQHLNFLTIM 260
TA+GELPPYFISRAA LSG K+ +E ++NG +A VN+IK W LSH+Q+LNF TI+
Sbjct: 195 TALGELPPYFISRAASLSGGKMKELETCSGDDNGFIAKRVNQIKSWLLSHSQYLNFFTIL 254
Query: 261 ALASVPNPLFDLAGIMCGQFGIPFWKFFLATFIGKAIIKTHIQTVFIISVCNNQLLNWIE 320
LASVPNPLFDLAGIMCGQF PFW+FFLAT IGKAIIKTHIQTVFII VCNNQLL+W+E
Sbjct: 255 ILASVPNPLFDLAGIMCGQFEKPFWEFFLATLIGKAIIKTHIQTVFIICVCNNQLLDWVE 314
Query: 321 NEFIWVLGHIPGFESILPSLIAKLHAAKDKYLKASHPVSPNIQGKKWDFSIASVWNTVVW 380
NE I++L +PGF S LP L AKL K+KYL AS PVS +I KKWD S ASVWN VVW
Sbjct: 315 NELIYILSFVPGFASALPELTAKLRLMKEKYLIASPPVSSDINVKKWDLSFASVWNGVVW 374
Query: 381 LMLMNFFVKIVNSTAQSYVKKQQEKELAASTE 412
LML+NFF +IV STAQ Y+KKQQE+EL A T
Sbjct: 375 LMLLNFFGQIVTSTAQRYLKKQQEEELDALTN 406
>AT4G14950.2 | Symbols: | SNARE associated Golgi protein family |
chr4:8545551-8547566 FORWARD LENGTH=355
Length = 355
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/348 (60%), Positives = 258/348 (74%), Gaps = 5/348 (1%)
Query: 21 LHKKHQXXXXXXXXXXQPFKTLKFFTFSVIQYLKKTAFYXXXXXXXXXXXSFVVGALGIM 80
L +KH+ QP TLK F + IQY+K++ Y + ++ G +
Sbjct: 8 LREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGGWFILITTLLVVSGGL 67
Query: 81 LITFDGPHEKHLEELLKYFRFGLWWVVXXXXXXXXXXXXXHTFVLYLGPHIAFFTLKAMQ 140
L+T DGPH KH+EE+L+Y R+GLWW+ HTFVLYLGPHIA FTLKA
Sbjct: 68 LVTVDGPHGKHVEEVLEYVRYGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFTLKATL 127
Query: 141 CGRVDLKSAPYDTIQLDRGPSWLDKDCSQFGPPLL--EYSSHIPLSSILSQVVLEAVLWG 198
CGRVDLKSAPYDTIQL R PSWLDK CS+FGPPL+ S +PL+SIL QV LEA+LWG
Sbjct: 128 CGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLEAILWG 187
Query: 199 MGTAIGELPPYFISRAARLSGSKLDSIEELD---TENNGIMATYVNKIKRWFLSHTQHLN 255
+GTA+GELPPYFISRAA +SGS +D +EELD TE++G MAT++N++KRW L+H+QHLN
Sbjct: 188 IGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTHSQHLN 247
Query: 256 FLTIMALASVPNPLFDLAGIMCGQFGIPFWKFFLATFIGKAIIKTHIQTVFIISVCNNQL 315
F T++ LASVPNPLFDLAGIMCGQFGIPFW+FFLAT IGKAIIKTHIQT+FII VCNNQL
Sbjct: 248 FFTVLVLASVPNPLFDLAGIMCGQFGIPFWEFFLATLIGKAIIKTHIQTIFIICVCNNQL 307
Query: 316 LNWIENEFIWVLGHIPGFESILPSLIAKLHAAKDKYLKASHPVSPNIQ 363
L+W+ENE IW+L H+PG S+LP L AKLHA K+KY+ A PV +I+
Sbjct: 308 LDWMENELIWILSHVPGLASMLPGLTAKLHAMKEKYIDAPSPVPSHIK 355