Miyakogusa Predicted Gene

Lj5g3v2046010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2046010.1 Non Chatacterized Hit- tr|I1MM22|I1MM22_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,25.63,2e-18,seg,NULL;
Frigida,Frigida-like; FAMILY NOT NAMED,NULL,CUFF.56947.1
         (304 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14900.1 | Symbols:  | FRIGIDA-like protein | chr4:8521759-85...   400   e-112
AT3G22440.1 | Symbols:  | FRIGIDA-like protein | chr3:7959854-79...   390   e-109
AT5G48385.1 | Symbols:  | FRIGIDA-like protein | chr5:19609471-1...    89   4e-18
AT4G00650.1 | Symbols: FRI, FLA | FRIGIDA-like protein | chr4:26...    50   2e-06

>AT4G14900.1 | Symbols:  | FRIGIDA-like protein |
           chr4:8521759-8523607 REVERSE LENGTH=532
          Length = 532

 Score =  400 bits (1028), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/304 (66%), Positives = 238/304 (78%), Gaps = 5/304 (1%)

Query: 1   MASTPDPGEVCELTPPPSFDDFQRQTSLMTSCTLLWKELSDHFSSLEQDLLNKSEALKNK 60
           M S+PDPGE+ + +  PSF +FQ+Q SLMTSC LLWKELS+HF+S+EQ+L+ KSEAL+  
Sbjct: 1   MESSPDPGELIK-SSQPSFFEFQKQASLMTSCNLLWKELSEHFTSMEQNLMKKSEALRQM 59

Query: 61  IXXXXXXXXXXXXXXQHRETTIDGSVQIALRNLDHRRDAALSSL--TEDSHDSPLGGEVD 118
           I              +HRE TID SV+IA   ++ R  AAL SL    D  D   G EVD
Sbjct: 60  IETLDNQTQSSIELLKHREVTIDHSVEIAEGKVEERVRAALDSLEKARDCGDEDTG-EVD 118

Query: 119 NGDGLMLKLKSFCLKMDALGFWGFVIGKKKELECLRAEMPAALSECVDPARFVLEAMSKV 178
           +GDGL+  LKS CLKMDA GFWGFVI +KKELE LR+++P AL +CVDP + VLEA+S+V
Sbjct: 119 DGDGLLSALKSLCLKMDARGFWGFVIARKKELENLRSQIPVALVDCVDPPKLVLEAVSEV 178

Query: 179 FPVDKRGE-KKGGNDLGWACVLVLESLIPVMVDPVIGKSRMLVTPSVKEEAKDIAETWKQ 237
           FPVDKRG  +K  ND GWACV++LESLIPVMVDPV+GKSR+LVTPSVKE+AK+IAETWK 
Sbjct: 179 FPVDKRGGGEKVSNDFGWACVVILESLIPVMVDPVMGKSRLLVTPSVKEKAKEIAETWKA 238

Query: 238 SLEERGGIENVKTPDVHTFLQHLVTFGIVNHDDLLLYRKLVIASAWRKHMPKLALSLGLA 297
           SLEERGGIENVKTPDVHTFLQHLVTFGIV  DDL LYRKLV+ SAWRK MPKLA+S+GL 
Sbjct: 239 SLEERGGIENVKTPDVHTFLQHLVTFGIVKKDDLALYRKLVVGSAWRKQMPKLAVSVGLG 298

Query: 298 NQMP 301
           +QMP
Sbjct: 299 DQMP 302


>AT3G22440.1 | Symbols:  | FRIGIDA-like protein |
           chr3:7959854-7961886 FORWARD LENGTH=532
          Length = 532

 Score =  390 bits (1001), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/308 (64%), Positives = 235/308 (76%), Gaps = 11/308 (3%)

Query: 1   MASTPDPGEVCELTPPPSFDDFQRQTSLMTSCTLLWKELSDHFSSLEQDLLNKSEALKNK 60
           M S PDPGE+ EL  P SF++FQ+QTSLMTSCTLLW+ELSDHF+SLEQ+L+ KSEALK  
Sbjct: 1   MGSVPDPGELTELAQP-SFEEFQKQTSLMTSCTLLWQELSDHFTSLEQNLMKKSEALKQM 59

Query: 61  IXXXXXXXXXXXXXXQHRETTIDGSVQIALRNLDHRRDAALSSLT-------EDSHDSPL 113
           I              + RE TID SV+I    +  R  AAL SL        + S+D   
Sbjct: 60  IETLDNQTQTSLESLKRREVTIDHSVEIVAGKVGERARAALESLEKARDGCGDGSNDD-- 117

Query: 114 GGEVDNGDGLMLKLKSFCLKMDALGFWGFVIGKKKELECLRAEMPAALSECVDPARFVLE 173
            G+VD+ +GL+  LKS CLKMDA GFW FV  +KKELE LR+++PAAL +CVDPA  VLE
Sbjct: 118 SGDVDDEEGLLSALKSLCLKMDARGFWNFVTARKKELENLRSKIPAALVDCVDPAMLVLE 177

Query: 174 AMSKVFPVDKRGEKKGGNDLGWACVLVLESLIPVMVDPVIGKSRMLVTPSVKEEAKDIAE 233
           A+S+VFPVD RG+K   ND GWACV++LESL PV+VDPVIGKSR+LVTPSVKE+AK+IAE
Sbjct: 178 AISEVFPVDTRGDKVS-NDYGWACVVILESLTPVIVDPVIGKSRLLVTPSVKEKAKEIAE 236

Query: 234 TWKQSLEERGGIENVKTPDVHTFLQHLVTFGIVNHDDLLLYRKLVIASAWRKHMPKLALS 293
           TWK+SLEERG IENVKTPDVHTFLQHLVTFGIV  +DL LYRKLV+ SAWRK MPKLA+S
Sbjct: 237 TWKKSLEERGRIENVKTPDVHTFLQHLVTFGIVKSEDLALYRKLVVGSAWRKQMPKLAVS 296

Query: 294 LGLANQMP 301
           +GL +QMP
Sbjct: 297 VGLGDQMP 304


>AT5G48385.1 | Symbols:  | FRIGIDA-like protein |
           chr5:19609471-19611712 FORWARD LENGTH=558
          Length = 558

 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 148/337 (43%), Gaps = 57/337 (16%)

Query: 18  SFDDFQRQTSLMTSCTLLWKELSDHFSSLEQDLLNKSEALKNKIXXXXXXXXXXXXXXQH 77
           +F + + Q ++  +  L WKEL +HF  LE+ L  +   L+++               + 
Sbjct: 24  AFAELESQRAV--TLNLKWKELEEHFHGLERSLKRRFHELEDQEKEYETKTRKAQELLEK 81

Query: 78  RETTIDGSVQIALRNLDHRRDAALSSLT-------------------------EDSHDSP 112
           ++  ++   + AL  L  +RDAA+ ++                          EDS +  
Sbjct: 82  KKAAVEAKEKAALERLQKKRDAAMFTINSALDKYNNAPVSKPSVGERWPQNAVEDSSNVF 141

Query: 113 LGGEV--DNGDGLM-----------LKLKSF------CLKMDALGFWGFVIGKKKELECL 153
               +  DN DG++            ++K++      C  MD+ G   FV   +K L  L
Sbjct: 142 AADSITDDNPDGIVQDVQISPVMGNYEVKAYPQLLKLCGDMDSTGLHKFVSDNRKNLASL 201

Query: 154 RAEMPAALSECVDPARFVLEAMSKVFPVDKRGE--KKGGNDLGW--ACVLVLESLIPVMV 209
           + E+P A     +PA  VL+++   +P++      KK  N LG    C++++E L  ++ 
Sbjct: 202 KEEIPMAFRAAANPASLVLDSLEGFYPMEAPTADGKKDANLLGMRRTCIMLMECLSILLS 261

Query: 210 DPVIGKSRMLVTPSVKEEAKDIAETWKQSLEERG-GIENVKTPDVHTFLQHLVTFGIV-- 266
                   ++++ +VK  AK IAE W   LE       N  + + H FLQ L TF IV  
Sbjct: 262 GLDRNCLAVVLSQNVKHRAKTIAEGWNPLLESLDMDACNGNSLEAHAFLQLLATFAIVAD 321

Query: 267 -NHDDLLLYRKLVIASAWRKHMPKLALSLGLANQMPG 302
              D+LL   KL+   + R+   +L  SLGLA +MPG
Sbjct: 322 FKEDELL---KLIPMVSRRRQAAELCRSLGLAEKMPG 355


>AT4G00650.1 | Symbols: FRI, FLA | FRIGIDA-like protein |
           chr4:269026-270363 FORWARD LENGTH=314
          Length = 314

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 5/138 (3%)

Query: 130 FCLKMDALGFWGFVIGKKKELECLRAEMPAALSECVDPARFVLEAMSKVFPVDKRGEKKG 189
            C  M + G   ++     +   L  E+P+AL    +PA+FVL+ + K +   +R   K 
Sbjct: 148 ICELMCSKGLRKYIYANISDQAKLMEEIPSALKLAKEPAKFVLDCIGKFYLQGRRAFTKE 207

Query: 190 G--NDLGWACVLVLESLIPVMVDPVIGKSRMLVTPSVKEEAKDIAETWKQSLEERGGIEN 247
              +      +L+LES    ++ P  GK ++ +   +K+EA+  A  W++ L   GG+  
Sbjct: 208 SPMSSARQVSLLILESF---LLMPDRGKGKVKIESWIKDEAETAAVAWRKRLMTEGGLAA 264

Query: 248 VKTPDVHTFLQHLVTFGI 265
            +  D    L  +  FG+
Sbjct: 265 AEKMDARGLLLLVACFGV 282