Miyakogusa Predicted Gene
- Lj5g3v2046010.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2046010.1 Non Chatacterized Hit- tr|I1MM22|I1MM22_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,25.63,2e-18,seg,NULL;
Frigida,Frigida-like; FAMILY NOT NAMED,NULL,CUFF.56947.1
(304 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14900.1 | Symbols: | FRIGIDA-like protein | chr4:8521759-85... 400 e-112
AT3G22440.1 | Symbols: | FRIGIDA-like protein | chr3:7959854-79... 390 e-109
AT5G48385.1 | Symbols: | FRIGIDA-like protein | chr5:19609471-1... 89 4e-18
AT4G00650.1 | Symbols: FRI, FLA | FRIGIDA-like protein | chr4:26... 50 2e-06
>AT4G14900.1 | Symbols: | FRIGIDA-like protein |
chr4:8521759-8523607 REVERSE LENGTH=532
Length = 532
Score = 400 bits (1028), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/304 (66%), Positives = 238/304 (78%), Gaps = 5/304 (1%)
Query: 1 MASTPDPGEVCELTPPPSFDDFQRQTSLMTSCTLLWKELSDHFSSLEQDLLNKSEALKNK 60
M S+PDPGE+ + + PSF +FQ+Q SLMTSC LLWKELS+HF+S+EQ+L+ KSEAL+
Sbjct: 1 MESSPDPGELIK-SSQPSFFEFQKQASLMTSCNLLWKELSEHFTSMEQNLMKKSEALRQM 59
Query: 61 IXXXXXXXXXXXXXXQHRETTIDGSVQIALRNLDHRRDAALSSL--TEDSHDSPLGGEVD 118
I +HRE TID SV+IA ++ R AAL SL D D G EVD
Sbjct: 60 IETLDNQTQSSIELLKHREVTIDHSVEIAEGKVEERVRAALDSLEKARDCGDEDTG-EVD 118
Query: 119 NGDGLMLKLKSFCLKMDALGFWGFVIGKKKELECLRAEMPAALSECVDPARFVLEAMSKV 178
+GDGL+ LKS CLKMDA GFWGFVI +KKELE LR+++P AL +CVDP + VLEA+S+V
Sbjct: 119 DGDGLLSALKSLCLKMDARGFWGFVIARKKELENLRSQIPVALVDCVDPPKLVLEAVSEV 178
Query: 179 FPVDKRGE-KKGGNDLGWACVLVLESLIPVMVDPVIGKSRMLVTPSVKEEAKDIAETWKQ 237
FPVDKRG +K ND GWACV++LESLIPVMVDPV+GKSR+LVTPSVKE+AK+IAETWK
Sbjct: 179 FPVDKRGGGEKVSNDFGWACVVILESLIPVMVDPVMGKSRLLVTPSVKEKAKEIAETWKA 238
Query: 238 SLEERGGIENVKTPDVHTFLQHLVTFGIVNHDDLLLYRKLVIASAWRKHMPKLALSLGLA 297
SLEERGGIENVKTPDVHTFLQHLVTFGIV DDL LYRKLV+ SAWRK MPKLA+S+GL
Sbjct: 239 SLEERGGIENVKTPDVHTFLQHLVTFGIVKKDDLALYRKLVVGSAWRKQMPKLAVSVGLG 298
Query: 298 NQMP 301
+QMP
Sbjct: 299 DQMP 302
>AT3G22440.1 | Symbols: | FRIGIDA-like protein |
chr3:7959854-7961886 FORWARD LENGTH=532
Length = 532
Score = 390 bits (1001), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/308 (64%), Positives = 235/308 (76%), Gaps = 11/308 (3%)
Query: 1 MASTPDPGEVCELTPPPSFDDFQRQTSLMTSCTLLWKELSDHFSSLEQDLLNKSEALKNK 60
M S PDPGE+ EL P SF++FQ+QTSLMTSCTLLW+ELSDHF+SLEQ+L+ KSEALK
Sbjct: 1 MGSVPDPGELTELAQP-SFEEFQKQTSLMTSCTLLWQELSDHFTSLEQNLMKKSEALKQM 59
Query: 61 IXXXXXXXXXXXXXXQHRETTIDGSVQIALRNLDHRRDAALSSLT-------EDSHDSPL 113
I + RE TID SV+I + R AAL SL + S+D
Sbjct: 60 IETLDNQTQTSLESLKRREVTIDHSVEIVAGKVGERARAALESLEKARDGCGDGSNDD-- 117
Query: 114 GGEVDNGDGLMLKLKSFCLKMDALGFWGFVIGKKKELECLRAEMPAALSECVDPARFVLE 173
G+VD+ +GL+ LKS CLKMDA GFW FV +KKELE LR+++PAAL +CVDPA VLE
Sbjct: 118 SGDVDDEEGLLSALKSLCLKMDARGFWNFVTARKKELENLRSKIPAALVDCVDPAMLVLE 177
Query: 174 AMSKVFPVDKRGEKKGGNDLGWACVLVLESLIPVMVDPVIGKSRMLVTPSVKEEAKDIAE 233
A+S+VFPVD RG+K ND GWACV++LESL PV+VDPVIGKSR+LVTPSVKE+AK+IAE
Sbjct: 178 AISEVFPVDTRGDKVS-NDYGWACVVILESLTPVIVDPVIGKSRLLVTPSVKEKAKEIAE 236
Query: 234 TWKQSLEERGGIENVKTPDVHTFLQHLVTFGIVNHDDLLLYRKLVIASAWRKHMPKLALS 293
TWK+SLEERG IENVKTPDVHTFLQHLVTFGIV +DL LYRKLV+ SAWRK MPKLA+S
Sbjct: 237 TWKKSLEERGRIENVKTPDVHTFLQHLVTFGIVKSEDLALYRKLVVGSAWRKQMPKLAVS 296
Query: 294 LGLANQMP 301
+GL +QMP
Sbjct: 297 VGLGDQMP 304
>AT5G48385.1 | Symbols: | FRIGIDA-like protein |
chr5:19609471-19611712 FORWARD LENGTH=558
Length = 558
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 148/337 (43%), Gaps = 57/337 (16%)
Query: 18 SFDDFQRQTSLMTSCTLLWKELSDHFSSLEQDLLNKSEALKNKIXXXXXXXXXXXXXXQH 77
+F + + Q ++ + L WKEL +HF LE+ L + L+++ +
Sbjct: 24 AFAELESQRAV--TLNLKWKELEEHFHGLERSLKRRFHELEDQEKEYETKTRKAQELLEK 81
Query: 78 RETTIDGSVQIALRNLDHRRDAALSSLT-------------------------EDSHDSP 112
++ ++ + AL L +RDAA+ ++ EDS +
Sbjct: 82 KKAAVEAKEKAALERLQKKRDAAMFTINSALDKYNNAPVSKPSVGERWPQNAVEDSSNVF 141
Query: 113 LGGEV--DNGDGLM-----------LKLKSF------CLKMDALGFWGFVIGKKKELECL 153
+ DN DG++ ++K++ C MD+ G FV +K L L
Sbjct: 142 AADSITDDNPDGIVQDVQISPVMGNYEVKAYPQLLKLCGDMDSTGLHKFVSDNRKNLASL 201
Query: 154 RAEMPAALSECVDPARFVLEAMSKVFPVDKRGE--KKGGNDLGW--ACVLVLESLIPVMV 209
+ E+P A +PA VL+++ +P++ KK N LG C++++E L ++
Sbjct: 202 KEEIPMAFRAAANPASLVLDSLEGFYPMEAPTADGKKDANLLGMRRTCIMLMECLSILLS 261
Query: 210 DPVIGKSRMLVTPSVKEEAKDIAETWKQSLEERG-GIENVKTPDVHTFLQHLVTFGIV-- 266
++++ +VK AK IAE W LE N + + H FLQ L TF IV
Sbjct: 262 GLDRNCLAVVLSQNVKHRAKTIAEGWNPLLESLDMDACNGNSLEAHAFLQLLATFAIVAD 321
Query: 267 -NHDDLLLYRKLVIASAWRKHMPKLALSLGLANQMPG 302
D+LL KL+ + R+ +L SLGLA +MPG
Sbjct: 322 FKEDELL---KLIPMVSRRRQAAELCRSLGLAEKMPG 355
>AT4G00650.1 | Symbols: FRI, FLA | FRIGIDA-like protein |
chr4:269026-270363 FORWARD LENGTH=314
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Query: 130 FCLKMDALGFWGFVIGKKKELECLRAEMPAALSECVDPARFVLEAMSKVFPVDKRGEKKG 189
C M + G ++ + L E+P+AL +PA+FVL+ + K + +R K
Sbjct: 148 ICELMCSKGLRKYIYANISDQAKLMEEIPSALKLAKEPAKFVLDCIGKFYLQGRRAFTKE 207
Query: 190 G--NDLGWACVLVLESLIPVMVDPVIGKSRMLVTPSVKEEAKDIAETWKQSLEERGGIEN 247
+ +L+LES ++ P GK ++ + +K+EA+ A W++ L GG+
Sbjct: 208 SPMSSARQVSLLILESF---LLMPDRGKGKVKIESWIKDEAETAAVAWRKRLMTEGGLAA 264
Query: 248 VKTPDVHTFLQHLVTFGI 265
+ D L + FG+
Sbjct: 265 AEKMDARGLLLLVACFGV 282