Miyakogusa Predicted Gene

Lj5g3v2045670.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2045670.2 Non Chatacterized Hit- tr|B9RYN0|B9RYN0_RICCO
3-oxoacyl-[acyl-carrier-protein] synthase, putative
OS,80,0.0000000000002,seg,NULL; no description,Thiolase-like,
subgroup; SUBFAMILY NOT NAMED,NULL; POLYKETIDE
SYNTHASE-RELA,CUFF.56587.2
         (103 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G46290.2 | Symbols: KASI, KAS1 | 3-ketoacyl-acyl carrier prot...    63   4e-11
AT5G46290.1 | Symbols: KASI, KAS1 | 3-ketoacyl-acyl carrier prot...    63   4e-11
AT5G46290.3 | Symbols: KASI | 3-ketoacyl-acyl carrier protein sy...    55   1e-08

>AT5G46290.2 | Symbols: KASI, KAS1 | 3-ketoacyl-acyl carrier protein
           synthase I | chr5:18774439-18776629 REVERSE LENGTH=418
          Length = 418

 Score = 62.8 bits (151), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query: 1   MHRTINQDNLADDVTIDTVPNVKKQPEVNVAFSNSFGFGGHNSAIS 46
           +H +INQ N    V  DTVPN KKQ EV+VA SNSFGFGGHNS ++
Sbjct: 367 LHPSINQFNPEQAVDFDTVPNEKKQHEVDVAISNSFGFGGHNSVVA 412


>AT5G46290.1 | Symbols: KASI, KAS1 | 3-ketoacyl-acyl carrier protein
           synthase I | chr5:18774439-18776629 REVERSE LENGTH=473
          Length = 473

 Score = 62.8 bits (151), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/46 (63%), Positives = 34/46 (73%)

Query: 1   MHRTINQDNLADDVTIDTVPNVKKQPEVNVAFSNSFGFGGHNSAIS 46
           +H +INQ N    V  DTVPN KKQ EV+VA SNSFGFGGHNS ++
Sbjct: 422 LHPSINQFNPEQAVDFDTVPNEKKQHEVDVAISNSFGFGGHNSVVA 467


>AT5G46290.3 | Symbols: KASI | 3-ketoacyl-acyl carrier protein
           synthase I | chr5:18774439-18776629 REVERSE LENGTH=489
          Length = 489

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/33 (72%), Positives = 27/33 (81%)

Query: 14  VTIDTVPNVKKQPEVNVAFSNSFGFGGHNSAIS 46
           V  DTVPN KKQ EV+VA SNSFGFGGHNS ++
Sbjct: 451 VDFDTVPNEKKQHEVDVAISNSFGFGGHNSVVA 483