Miyakogusa Predicted Gene
- Lj5g3v2045310.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2045310.1 Non Chatacterized Hit- tr|K4CHP3|K4CHP3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,33.76,7e-19,coiled-coil,NULL; TRANSMEMBRANE EMP24
DOMAIN-CONTAINING PROTEIN,NULL; GOLD,GOLD;
EMP24_GP25L,GOLD,NODE_50487_length_732_cov_336.381134.path2.1
(203 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22845.1 | Symbols: | emp24/gp25L/p24 family/GOLD family pro... 342 1e-94
AT3G07680.1 | Symbols: | emp24/gp25L/p24 family/GOLD family pro... 117 5e-27
AT1G09580.1 | Symbols: | emp24/gp25L/p24 family/GOLD family pro... 72 2e-13
AT1G57620.1 | Symbols: | emp24/gp25L/p24 family/GOLD family pro... 69 2e-12
AT1G21900.1 | Symbols: | emp24/gp25L/p24 family/GOLD family pro... 60 1e-09
AT1G26690.1 | Symbols: | emp24/gp25L/p24 family/GOLD family pro... 58 4e-09
AT1G14010.1 | Symbols: | emp24/gp25L/p24 family/GOLD family pro... 58 4e-09
AT1G69460.1 | Symbols: | emp24/gp25L/p24 family/GOLD family pro... 57 1e-08
AT2G03290.1 | Symbols: | emp24/gp25L/p24 family/GOLD family pro... 56 2e-08
AT3G10780.1 | Symbols: | emp24/gp25L/p24 family/GOLD family pro... 52 2e-07
AT3G29070.1 | Symbols: | emp24/gp25L/p24 family/GOLD family pro... 48 4e-06
>AT3G22845.1 | Symbols: | emp24/gp25L/p24 family/GOLD family
protein | chr3:8087373-8088550 FORWARD LENGTH=214
Length = 214
Score = 342 bits (876), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 158/202 (78%), Positives = 180/202 (89%)
Query: 2 MEGKRIANKMWMVLMCLMLSFVARIESLSVTVHEVECIYEYVLYEGDTVSGNFVVVDHDI 61
ME ++ +++++ ++L+ + +I SLSVTV++ EC+ EYVLYEGDTVSGNFVVVDHDI
Sbjct: 1 MERRQAKIHVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVDHDI 60
Query: 62 FWGSDHPGIDLTVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCFHNPYSTPETVSFYI 121
FWGSDHPG+D TVTSPAGN V +KGTSGDKF+FKAP SGMYKFCFHNPYSTPETVSFYI
Sbjct: 61 FWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFYI 120
Query: 122 HVGHIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRSRVI 181
HVGHIPNEH+LAKDEHLDP+NVKIAELREALESV AEQKYLKARDTRHRHTNESTR RVI
Sbjct: 121 HVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVI 180
Query: 182 FYTVGEYLLLAAVSTLQVIYIR 203
FYTVGEY+ LAA S LQV+YIR
Sbjct: 181 FYTVGEYIFLAAASGLQVLYIR 202
>AT3G07680.1 | Symbols: | emp24/gp25L/p24 family/GOLD family
protein | chr3:2455627-2456652 FORWARD LENGTH=208
Length = 208
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 13 MVLMCLMLSFVARIESLSVTVHEVECIYEYVLYEGDTVSGNFVVVDHDIFWGSDHPGIDL 72
+VL+ L+ SF A + + + EC YEGDT+ +FVV+ D W + G+DL
Sbjct: 7 IVLLGLLWSFQATL-GIRFVIDREECFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDL 65
Query: 73 TVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCFHNPYSTPETVSFYIHVGHIPNEHNL 132
+ P G +HD + K F G+Y+FCF N ET+ F + +GH
Sbjct: 66 VIHGPTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQH 125
Query: 133 AKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRSRVIFYTVGEYLLLA 192
AKDEH P+ +I++L EAL ++ EQ +L+A+ R NE+ R + + E L
Sbjct: 126 AKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALI 185
Query: 193 AVSTLQVIYIR 203
S LQV +R
Sbjct: 186 GASFLQVYLLR 196
>AT1G09580.1 | Symbols: | emp24/gp25L/p24 family/GOLD family
protein | chr1:3104657-3106092 FORWARD LENGTH=217
Length = 217
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 48 DTVSGNFVVVDHDIFWGSDH---PGIDLTVTSPAGNTVHDIKGTSGDKFQFKAPASGMYK 104
+ + N VV+ + DH P I + VTSP GN +H+++ + +F F SG Y
Sbjct: 45 EEIQSNVVVLADYLIISEDHEVMPTISVKVTSPYGNNLHNMENVTHGQFAFTTQESGNYL 104
Query: 105 FCFHNPYSTPETVSFYIHVG-----HIPNEHNLAKDEHLDPINVKIAELREALESVTAEQ 159
CF + + I++ + ++AK E ++ + ++I +L A+E++
Sbjct: 105 ACFWADEKSHGNKNVSINIDWRTGIAAKDWASIAKKEKIEGVELEIRKLEGAVEAIHENI 164
Query: 160 KYLKARDTRHRHTNESTRSRVIFYTVGEYLLLAAVSTLQVIYIR 203
YL+ R+ R +E T SRV +Y++ + AVS QV+Y++
Sbjct: 165 LYLRNREADMRTMSEKTNSRVAWYSIMSLGVCIAVSGFQVLYLK 208
>AT1G57620.1 | Symbols: | emp24/gp25L/p24 family/GOLD family
protein | chr1:21342863-21344581 FORWARD LENGTH=212
Length = 212
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 2 MEGKRIANKMWMVLMCLMLSFVARIESLSVTVHEVECIYEYVLYEGDTVSGNFVVV--DH 59
M+ K I + + + LS + L+V +C+ E + V +++V+ +H
Sbjct: 1 MKKKMIPTTILLSALIFSLSPICEAVWLTVPHTGSKCVSEEI-QSNVIVLADYLVISEEH 59
Query: 60 DIFWGSDHPGIDLTVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCFHNPYSTPETVSF 119
IF P + + VT+P G +H + T+ +F F SG Y CF + F
Sbjct: 60 SIF-----PTVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKSHGNKDF 114
Query: 120 YIHVG-----HIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNE 174
I++ + ++A+ E ++ + ++ +L A+E++ YL+ R+ R +E
Sbjct: 115 SINIDWKTGIAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSE 174
Query: 175 STRSRVIFYTVGEYLLLAAVSTLQVIYIR 203
T SRV +Y++ + VS LQ++Y++
Sbjct: 175 KTNSRVAWYSIMSLGICIVVSGLQILYLK 203
>AT1G21900.1 | Symbols: | emp24/gp25L/p24 family/GOLD family
protein | chr1:7691165-7692327 REVERSE LENGTH=216
Length = 216
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 8/196 (4%)
Query: 13 MVLMCLMLSFVARIESLSVTVHEVECIYEYVLYEGDTVSGNFVVVDHDIFWGSDHPGIDL 72
+VL L +++ I T +C+ E + ++ +VV +H+ + P +
Sbjct: 15 VVLFFLTVNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHN---PENTPAVSS 71
Query: 73 TVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCF----HNPYSTPETVSFYIHVGHIPN 128
VTSP GN +H + + +F F +G Y CF + + P T+ +G
Sbjct: 72 KVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWIDSSHHLANPITLGVDWKMGIAAK 131
Query: 129 EHN-LAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRSRVIFYTVGE 187
+ + +AK E ++ + +++ L + S+ Y+K R+ R +E+T SRV ++++
Sbjct: 132 DWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVAWFSIMS 191
Query: 188 YLLLAAVSTLQVIYIR 203
+ V Q++Y++
Sbjct: 192 LGVCVVVVGSQILYLK 207
>AT1G26690.1 | Symbols: | emp24/gp25L/p24 family/GOLD family
protein | chr1:9224299-9225682 REVERSE LENGTH=214
Length = 214
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 16 MCLMLSFVARIESLSVTVH------EVECIYEYVLYEGDTVSGNFVVVDHDIFWGSDHPG 69
+C +L F+A +S ++H +CI E + TV G + VV+ + HP
Sbjct: 8 LCTILLFLAISSQVSQSLHFELQSGRTKCISEDIKSNSMTV-GKYTVVNPN----EAHPS 62
Query: 70 -----IDLTVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCFHNPYSTPE---TVSFYI 121
I + VTS GNT H + +F F A SG Y C+ PE ++ F
Sbjct: 63 PQSHKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDHKPEVTLSIDFDW 122
Query: 122 HVG-HIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRSRV 180
G + ++AK ++ + + L E + S+ E YL+ R+ ++ N +T S++
Sbjct: 123 RTGVQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKM 182
Query: 181 IFYTVGEYLLLAAVSTLQVIYIR 203
+ + + V+ +Q ++++
Sbjct: 183 AWLSFLSLFVCLGVAGMQFVHLK 205
>AT1G14010.1 | Symbols: | emp24/gp25L/p24 family/GOLD family
protein | chr1:4800385-4801790 REVERSE LENGTH=212
Length = 212
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 37 ECIYEYVLYEGDTVSGNFVVVDHDIFWGSDHP-----GIDLTVTSPAGNTVHDIKGTSGD 91
+CI E + T+ ++ H+ DHP + + VTSP G H+ G
Sbjct: 33 KCISEEIHANAMTIGKYSIINPHE-----DHPLPSSHKVTVRVTSPQGTAYHESDGVESG 87
Query: 92 KFQFKAPASGMYKFCFHNPYSTPET---VSFYIHVG-HIPNEHNLAKDEHLDPINVKIAE 147
+F F A +G Y CF PET + F G H + N+AK ++ + ++ +
Sbjct: 88 QFSFVAVETGDYISCFSAVDHKPETTLIIDFDWRTGIHTKDWSNVAKKSQVETMEFEVKK 147
Query: 148 LREALESVTAEQKYLKARDTRHRHTNESTRSRVIFYTVGEYLLLAAVSTLQVIYIR 203
L E + + E YL+ R+ + N +T S++ + + + +V+ LQ +++
Sbjct: 148 LFETVNGIHDEMFYLRDREEEMHNLNIATNSKMAWLSFVSLAVCLSVAGLQFWHLK 203
>AT1G69460.1 | Symbols: | emp24/gp25L/p24 family/GOLD family
protein | chr1:26112054-26113160 REVERSE LENGTH=214
Length = 214
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 8 ANKMWMVLMCLMLSFVARIESLSVTVH--EVECIYEYVLYEGDTVSGNFVVVDHDIFWGS 65
+ K+W +L+ L + + SL +H +CI E + TV + H+ G
Sbjct: 5 SQKLWTMLLILAI-WSPISHSLHFDLHSGRTKCIAEDIKSNSMTVGKYNIDNPHE---GQ 60
Query: 66 DHP---GIDLTVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCFHNPYSTPE---TVSF 119
P I + VTS +GN H + +F F A +G Y CF PE ++ F
Sbjct: 61 ALPQTHKISVKVTSNSGNNYHHAEQVDSGQFAFSAVEAGDYMACFTAVDHKPEVSLSIDF 120
Query: 120 YIHVG-HIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRS 178
G + N+AK ++ + ++ L + + S+ E YL+ R+ + N ST +
Sbjct: 121 EWKTGVQSKSWANVAKKSQVEVMEFEVKSLLDTVNSIHEEMYYLRDREEEMQDLNRSTNT 180
Query: 179 RVIFYTVGEYLLLAAVSTLQVIYIR 203
++ + +V + + V+ +Q ++++
Sbjct: 181 KMAWLSVLSFFVCIGVAGMQFLHLK 205
>AT2G03290.1 | Symbols: | emp24/gp25L/p24 family/GOLD family
protein | chr2:999422-1000434 FORWARD LENGTH=213
Length = 213
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 35 EVECIYEYVLYEGDTVSGNFVVVDHDIFWGSDHPGID-----LTVTSPAGNTVHDIKGTS 89
+ +CI E + ++ F+V ++ +HP D + V P G +H+
Sbjct: 31 KTKCIGEEIHENAMSIGKYFIVNPNE----DNHPLPDSHKIIVKVMPPQGKNLHEADKVE 86
Query: 90 GDKFQFKAPASGMYKFCFHNPYSTPET---VSFYIHVG-HIPNEHNLAKDEHLDPINVKI 145
+F F A +G Y C PET + F G H N+AK +D + ++
Sbjct: 87 AGQFSFTAYENGSYVACITAIDYKPETTLTIDFDWKTGVHSKEWTNVAKKSQVDMMEYQV 146
Query: 146 AELREALESVTAEQKYLKARDTRHRHTNESTRSRVIFYTVGEYLLLAAVSTLQVIYIR 203
L + + S+ E YL+ R+ + N ST S++ + + G ++ +V+ LQ +++
Sbjct: 147 KTLMDTVISIHEEMYYLREREEEMQELNRSTNSKMAWLSFGSLVVCLSVAGLQFWHLK 204
>AT3G10780.1 | Symbols: | emp24/gp25L/p24 family/GOLD family
protein | chr3:3375161-3376334 FORWARD LENGTH=217
Length = 217
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 21/197 (10%)
Query: 21 SFVARIESLSVTVHEV--ECIYEYVLYEGDTVSGNFVVV-DH---DIFWGSDHPGIDLTV 74
S +E++ +TV E C+YE + N VVV D+ D + P +D+ V
Sbjct: 19 SLFPGVEAIWLTVPESGERCVYE-------EIQANVVVVLDYICIDDAFTQLGPTLDVRV 71
Query: 75 TSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCF-------HNPYSTPETVSFYIHVG-HI 126
TSP G ++ I + + F SG + C H+ ++ VS +G
Sbjct: 72 TSPYGKELYKIANVTHGQAAFTTSESGTFLACLAMHHDQSHHSVNSSVIVSLDWKMGIRA 131
Query: 127 PNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRSRVIFYTVG 186
+ ++AK E ++ + ++I E ++ A YL+ R+ R NE T +RV +
Sbjct: 132 KDWDSVAKKEKIEGVELEIRRSTEYASAIRANILYLRIREAYMREINEKTNTRVNQLGLM 191
Query: 187 EYLLLAAVSTLQVIYIR 203
+ VS QV+Y++
Sbjct: 192 SLGVAIVVSISQVLYLK 208
>AT3G29070.1 | Symbols: | emp24/gp25L/p24 family/GOLD family
protein | chr3:11050193-11051153 FORWARD LENGTH=225
Length = 225
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 72 LTVTSPAGNTVHDIKGTSGDKFQFKAPASGMYKFCFHNPYSTPE---TVSFYIHVG-HIP 127
+TV+SP G + H + KF F A +G Y CF P P V F G
Sbjct: 81 VTVSSPKGKSHHHAENVESGKFVFTAEETGDYMTCFVAPGYRPTAKFAVDFEWKSGVEAK 140
Query: 128 NEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRSRVIFYTVGE 187
+ +AK + + V++ +L + E++ E L R+ + N ST SR+ ++
Sbjct: 141 DWTTIAKRGQITMLEVEVRKLLDVTETIHEEMFQLIEREREMQELNRSTNSRMAALSLLS 200
Query: 188 YLLLAAVSTLQVIYIR 203
+++ +V+ LQ+ +++
Sbjct: 201 FVVTMSVAGLQLRHLK 216