Miyakogusa Predicted Gene
- Lj5g3v2029600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2029600.1 Non Chatacterized Hit- tr|I1KJT6|I1KJT6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.88,0,no
description,Tetratricopeptide-like helical; seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,,CUFF.56445.1
(641 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 739 0.0
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 478 e-135
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 447 e-125
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 444 e-125
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 439 e-123
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 432 e-121
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 420 e-117
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 419 e-117
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 418 e-117
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 417 e-116
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-115
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 413 e-115
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 405 e-113
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 403 e-112
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 399 e-111
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 398 e-111
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 398 e-111
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 397 e-110
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 391 e-109
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 385 e-107
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 384 e-107
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 381 e-106
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-106
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 381 e-106
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-106
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 379 e-105
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 373 e-103
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 371 e-103
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 369 e-102
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 366 e-101
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 364 e-101
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 363 e-100
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 359 4e-99
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 355 4e-98
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 5e-98
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 5e-98
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 7e-98
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 2e-97
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 352 3e-97
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 350 2e-96
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 350 2e-96
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 349 3e-96
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 7e-96
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 348 7e-96
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 2e-94
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 3e-94
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 6e-94
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 3e-93
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 334 1e-91
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 7e-91
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 327 2e-89
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 327 2e-89
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 1e-85
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 4e-85
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 7e-82
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 1e-81
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 2e-80
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 295 5e-80
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 4e-79
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 285 5e-77
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 3e-76
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 3e-75
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 6e-75
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 5e-74
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 1e-73
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 5e-73
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 6e-72
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 268 1e-71
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 267 2e-71
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 8e-71
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 265 8e-71
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 9e-71
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 2e-70
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 8e-70
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 2e-69
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 255 6e-68
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 1e-67
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 2e-67
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 1e-66
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 246 5e-65
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 244 2e-64
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 3e-63
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 236 3e-62
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 4e-62
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 236 5e-62
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 8e-62
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 235 8e-62
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 2e-60
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 3e-60
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 5e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 9e-60
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 7e-59
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 8e-59
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 223 3e-58
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 222 7e-58
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 220 2e-57
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 3e-57
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 8e-57
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 7e-56
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 214 1e-55
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 2e-55
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 1e-54
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 6e-54
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 5e-50
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 6e-50
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 6e-49
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 191 2e-48
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 2e-47
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 4e-43
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 3e-42
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 113 3e-25
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 5e-23
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 2e-19
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 91 3e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 89 1e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 2e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 86 1e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 84 4e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 83 5e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 80 4e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 79 1e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 78 2e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 5e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 76 9e-14
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 73 7e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 8e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 6e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 3e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 67 5e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 65 1e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 65 2e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 62 9e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 62 9e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 62 1e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 2e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 59 1e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 4e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 56 7e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 9e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 8e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 52 2e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/613 (59%), Positives = 449/613 (73%), Gaps = 18/613 (2%)
Query: 40 LCKSGKLEEALRLIESP--------NPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLH 91
L KS KL+EA+ LIE+ P Y D LLH CIS KSL HG K+ +L+
Sbjct: 105 LSKSTKLDEAVTLIENSSSSPSNLSTPEAYTD-----LLHACISAKSLHHGIKICSLILN 159
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDP--PESVWVAMAIGYSRNRLSK 149
+ + NP L SKLITL+SVC RLD AR++F D + E VW AMAIGYSRN +
Sbjct: 160 NPS-LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPR 218
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
+AL+VY DML +EPGNF+ SVALKAC D+ D RVGR IHAQ+ KR E+ DQVV N LL
Sbjct: 219 DALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLL 278
Query: 210 RFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSW 269
+ Y+E G D +VF+ M +RNVV+WN+LI+ S + +V E + FR MQ +E +GFSW
Sbjct: 279 KLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ-EEMIGFSW 337
Query: 270 ITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDG 329
TLTT+LP C+++ AL +GKEIH QI+KS +K D PLLN+LMDMY KCG + Y ++VFD
Sbjct: 338 ATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDV 397
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG 389
M +KDL SWN ML Y+ING IE+ I+LF+ MI S + PDGITFV+LLSGCS +GLT G
Sbjct: 398 MLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYG 457
Query: 390 QKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCR 448
F M+ ++ V P+LEHYACLVDILGR+GK+ EA+ V MP K S SIWGSLLNSCR
Sbjct: 458 LSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCR 517
Query: 449 LDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGC 508
L GNVS+ E AA+ LF +EP+N GNYVM+SNIYADA MW+ V ++REMM RG+KK+AGC
Sbjct: 518 LHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGC 577
Query: 509 SWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVM 568
SW+Q+K +I FVAGG +FR+S EY K+W L AI+ SGY PNT VVLHD++EE K
Sbjct: 578 SWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKAN 637
Query: 569 WVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFH 628
WVCGHSERLA ++LIHTG G+PIRITKNLRVC DCHSWMK VS+VTRR+IVLRDT RFH
Sbjct: 638 WVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFH 697
Query: 629 HFENGTCSCMDHW 641
HF +G CSC D+W
Sbjct: 698 HFVDGICSCKDYW 710
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/616 (40%), Positives = 379/616 (61%), Gaps = 16/616 (2%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSK 93
N ++SLCK GKL++A+R++ + Q ++ L+ C R SL ++H+H+L +
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESSPSQQTYEL--LILCCGHRSSLSDALRVHRHILDNG 107
Query: 94 GRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALL 153
++P L +KLI +YS G +D AR+VF D+ VW A+ + +E L
Sbjct: 108 SD--QDPFLATKLIGMYSDLGSVDYARKVF-DKTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 154 VYRDMLARSVEPGNFAFSVALKACT----DVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
+Y M VE F ++ LKAC V G+ IHA L +R + + L+
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLV 224
Query: 210 RFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAM--QLKEGMGF 267
Y GC VF MP RNVVSW+ +IA ++ GK FE L FR M + K+
Sbjct: 225 DMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN 284
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF 327
S +T+ +VL CA L AL GK IHG I++ G + P+++AL+ MY +CG + ++VF
Sbjct: 285 S-VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVF 343
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
D M +D+ SWN++++ Y ++G +KAI +F+EM+ + P +TFVS+L CSH GL
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 388 EGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
EG++ F M +D+G++P +EHYAC+VD+LGR+ +LDEA + ++M + +WGSLL S
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 447 CRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
CR+ GNV LAE A+ RLF +EP NAGNYV+L++IYA+A MW+ VKRV++++ RG++K
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523
Query: 507 GCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNA-LSNAIKDSGYIPNTDVVLHDINEEM 565
G W+++++++++FV+ +F E + + L+ +K+ GYIP T VL+++ E
Sbjct: 524 GRCWMEVRRKMYSFVS--VDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEE 581
Query: 566 KVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTN 625
K V GHSE+LA F LI+T G PIRITKNLR+C DCH + K +S+ + I++RD N
Sbjct: 582 KERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVN 641
Query: 626 RFHHFENGTCSCMDHW 641
RFH F+NG CSC D+W
Sbjct: 642 RFHRFKNGVCSCGDYW 657
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/629 (37%), Positives = 364/629 (57%), Gaps = 21/629 (3%)
Query: 25 HHNHKPPPLNPTLKS------LCKSGKLEEALRLIESPNP-TPYQDEDISQLLHLCISRK 77
H + P N L++ LC +G+L+EAL + P + D LL+ C+ ++
Sbjct: 9 HRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYD--ALLNACLDKR 66
Query: 78 SLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--W 135
+L GQ++H H++ K R + L+++L+ Y C L++AR+V +E P ++V W
Sbjct: 67 ALRDGQRVHAHMI--KTRYLPATYLRTRLLIFYGKCDCLEDARKVL---DEMPEKNVVSW 121
Query: 136 VAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAK 195
AM YS+ S EAL V+ +M+ +P F F+ L +C +G+ IH + K
Sbjct: 122 TAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK 181
Query: 196 RDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDA 255
+ ++ V ++LL Y + G + +FE +P+R+VVS +IAG++ G E L+
Sbjct: 182 WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEM 241
Query: 256 FRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYA 315
F + EGM +++T ++L + L L GK+ H +++ L N+L+DMY+
Sbjct: 242 FHRLH-SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYS 300
Query: 316 KCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMI-RSNIRPDGITFV 374
KCG++ Y +++FD M + SWN ML GYS +G + ++LF M ++PD +T +
Sbjct: 301 KCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLL 360
Query: 375 SLLSGCSHSGLTSEGQKFFNLM--QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMP 432
++LSGCSH + G F+ M +YG +P EHY C+VD+LGR+G++DEA + MP
Sbjct: 361 AVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420
Query: 433 MKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKR 492
K + + GSLL +CR+ +V + E+ RL EIEP NAGNYV+LSN+YA AG W V
Sbjct: 421 SKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNN 480
Query: 493 VREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIP 552
VR MM + + K+ G SWIQ +Q +H F A + R E L +S +K +GY+P
Sbjct: 481 VRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRRE-EVLAKMKEISIKMKQAGYVP 539
Query: 553 NTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVS 612
+ VL+D++EE K + GHSE+LA F LI TG G+PIR+ KNLR+CVDCH++ K S
Sbjct: 540 DLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFS 599
Query: 613 RVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+V R + LRD NRFH +G CSC D+W
Sbjct: 600 KVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/537 (42%), Positives = 333/537 (62%), Gaps = 3/537 (0%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP 165
L+ +YS CG LD A+ VF+ E D + +M GY+R L+ EA+ ++ +M + P
Sbjct: 337 LLDMYSKCGDLDSAKAVFR-EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 166 GNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVF 225
+ + L C G+ +H + + D D V+NAL+ Y +CG + VF
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 226 EVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTAL 285
M ++++SWNT+I G+S E L F + ++ T+ VLP CA L+A
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 286 HSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGY 345
G+EIHG I+++G +DR + N+L+DMYAKCG++ +FD + SKDL SW M+AGY
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 575
Query: 346 SINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ-DYGVQPS 404
++G ++AI LF++M ++ I D I+FVSLL CSHSGL EG +FFN+M+ + ++P+
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635
Query: 405 LEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLF 464
+EHYAC+VD+L R+G L +A NMP+ +IWG+LL CR+ +V LAE AE++F
Sbjct: 636 VEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF 695
Query: 465 EIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGG 524
E+EP N G YV+++NIYA+A WE VKR+R+ + RG++K+ GCSWI+IK R++ FVAG
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755
Query: 525 SSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALI 584
SS+ + + + I++ GY P T L D E K +CGHSE+LA +I
Sbjct: 756 SSNPETENIEAFLRKVRARMIEE-GYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814
Query: 585 HTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+G G IR+TKNLRVC DCH K +S++TRR IVLRD+NRFH F++G CSC W
Sbjct: 815 SSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 198/401 (49%), Gaps = 4/401 (0%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSK 93
N L+ C+SG LE A++L+ + +L LC KSL+ G+++ + +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEV-DNFIRGN 123
Query: 94 GRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALL 153
G VI++ L SKL +Y+ CG L EA RVF DE + W + +++ ++
Sbjct: 124 GFVIDS-NLGSKLSLMYTNCGDLKEASRVF-DEVKIEKALFWNILMNELAKSGDFSGSIG 181
Query: 154 VYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYV 213
+++ M++ VE ++ FS K+ + + G +H + K V N+L+ FY+
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 214 ECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLT 273
+ +VF+ M +R+V+SWN++I G+ G + L F M L G+ T+
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM-LVSGIEIDLATIV 300
Query: 274 TVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK 333
+V CA + G+ +H VK+ + N L+DMY+KCG + K VF M +
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
+ S+ +M+AGY+ G +A+ LF+EM I PD T ++L+ C+ L EG++
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 394 NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
+++ + + L+D+ + G + EA V M +K
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 52 LIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYS 111
L+E +P + ++ +L C S + + G+++H +++ + + + + L+ +Y+
Sbjct: 489 LLEEKRFSP-DERTVACVLPACASLSAFDKGREIHGYIM--RNGYFSDRHVANSLVDMYA 545
Query: 112 VCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFS 171
CG L A +F D S W M GY + KEA+ ++ M +E +F
Sbjct: 546 KCGALLLAHMLFDDIASKDLVS-WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFV 604
Query: 172 VALKACTDVG 181
L AC+ G
Sbjct: 605 SLLYACSHSG 614
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/628 (38%), Positives = 364/628 (57%), Gaps = 28/628 (4%)
Query: 34 NPTLKSLCKSGKLEEALR-----LIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQH 88
N L SLC++ +L EAL ++E P + IS +L C + L G++LH +
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT---ISSVLPACSHLEMLRTGKELHAY 327
Query: 89 LLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLS 148
L + G + EN + S L+ +Y C ++ RRVF D D +W AM GYS+N
Sbjct: 328 ALKN-GSLDENSFVGSALVDMYCNCKQVLSGRRVF-DGMFDRKIGLWNAMIAGYSQNEHD 385
Query: 149 KEALLVYRDMLARS-VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNA 207
KEALL++ M + + + + + AC G AIH + KR + D+ V N
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 208 LLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE---- 263
L+ Y G +R+F M R++V+WNT+I G+ + L MQ E
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 264 ------GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
+ + ITL T+LP CA L+AL GKEIH +K+ D + +AL+DMYAKC
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
G + +KVFD + K++ +WN ++ Y ++G ++AIDL M+ ++P+ +TF+S+
Sbjct: 566 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 625
Query: 378 SGCSHSGLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLS 436
+ CSHSG+ EG + F +M+ DYGV+PS +HYAC+VD+LGR+G++ EA + MP +
Sbjct: 626 AACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 685
Query: 437 -GSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVRE 495
W SLL + R+ N+ + E AA+ L ++EPN A +YV+L+NIY+ AG+W+ VR
Sbjct: 686 KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 745
Query: 496 MMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSS--AEYLKIWNALSNAIKDSGYIPN 553
M +G++K+ GCSWI+ +H FVAG SS +S + YL+ L ++ GY+P+
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLE---TLWERMRKEGYVPD 802
Query: 554 TDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSR 613
T VLH++ E+ K + +CGHSE+LA F +++T G IR+ KNLRVC DCH K +S+
Sbjct: 803 TSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISK 862
Query: 614 VTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+ R I+LRD RFH F+NGTCSC D+W
Sbjct: 863 IVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 147/285 (51%), Gaps = 8/285 (2%)
Query: 112 VCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFS 171
V + A +F + P W+ + R+ L +EA+L Y DM+ ++P N+AF
Sbjct: 44 VASAVSGAPSIFISQSRSP--EWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFP 101
Query: 172 VALKACTDVGDSRVGRAIHAQLAKRDEEADQV-VNNALLRFYVECGCSGDVLRVFEVMPQ 230
LKA D+ D +G+ IHA + K D V V N L+ Y +CG G V +VF+ + +
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE 161
Query: 231 RNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL---TALHS 287
RN VSWN+LI+ K L+AFR M L E + S TL +V+ C+ L L
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCM-LDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 288 GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSI 347
GK++H ++ G+ + ++N L+ MY K G + K + +DL +WNT+L+
Sbjct: 221 GKQVHAYGLRKGE-LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 348 NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKF 392
N Q+ +A++ EM+ + PD T S+L CSH + G++
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 195/436 (44%), Gaps = 22/436 (5%)
Query: 34 NPTLKSLCKSGKLEEALR-----LIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQH 88
N + SLC K E AL L E+ P+ + + + L G+++H +
Sbjct: 168 NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 227
Query: 89 LLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLS 148
L KG + N + + L+ +Y G+L + +V W + +N
Sbjct: 228 GLR-KGEL--NSFIINTLVAMYGKLGKL-ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDE-EADQVVNNA 207
EAL R+M+ VEP F S L AC+ + R G+ +HA K + + V +A
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343
Query: 208 LLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
L+ Y C RVF+ M R + WN +IAG+S E L F M+ G+
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF 327
+ T+ V+P C + A + IHG +VK G DR + N LMDMY++ G I ++F
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM-----------IRSNIRPDGITFVSL 376
ME +DL +WNTM+ GY + E A+ L +M R +++P+ IT +++
Sbjct: 464 GKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTI 523
Query: 377 LSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLS 436
L C+ ++G++ + + + LVD+ + G L + V +P K +
Sbjct: 524 LPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-N 582
Query: 437 GSIWGSLLNSCRLDGN 452
W ++ + + GN
Sbjct: 583 VITWNVIIMAYGMHGN 598
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 190/405 (46%), Gaps = 17/405 (4%)
Query: 37 LKSLCKSGKLEEAL-----RLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLH 91
L+S +S L EA+ ++ P Y LL + +E G+++H H+ +
Sbjct: 69 LRSKVRSNLLREAVLTYVDMIVLGIKPDNYA---FPALLKAVADLQDMELGKQIHAHV-Y 124
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
G +++ T+ + L+ LY CG +VF D + + W ++ + A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVF-DRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSR---VGRAIHAQLAKRDEEADQVVNNAL 208
L +R ML +VEP +F + AC+++ +G+ +HA R E + + N L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA-YGLRKGELNSFIINTL 242
Query: 209 LRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS 268
+ Y + G + R++V+WNT+++ ++ E L+ R M L EG+
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL-EGVEPD 301
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL-NALMDMYAKCGSIGYCKKVF 327
T+++VLP C+ L L +GKE+H +K+G + + +AL+DMY C + ++VF
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRS-NIRPDGITFVSLLSGCSHSGLT 386
DGM + + WN M+AGYS N ++A+ LF M S + + T ++ C SG
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 387 SEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
S + + G+ L+D+ R GK+D A+ + M
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/612 (38%), Positives = 358/612 (58%), Gaps = 26/612 (4%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSK 93
N L + ++ K+EEA L +S + LL + +K + ++ +
Sbjct: 192 NALLSAYVQNSKMEEACMLFKSRENWALVSWNC--LLGGFVKKKKIVEARQFFDSM---- 245
Query: 94 GRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSKEA 151
+ + + +IT Y+ G++DEAR++F +E P + V W AM GY +NR+ +EA
Sbjct: 246 --NVRDVVSWNTIITGYAQSGKIDEARQLF---DESPVQDVFTWTAMVSGYIQNRMVEEA 300
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
R++ + E +++ L + + + + R+ N ++
Sbjct: 301 ----RELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITG 352
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
Y +CG + +F+ MP+R+ VSW +IAG+S G FE L F M+ +EG + +
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME-REGGRLNRSS 411
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME 331
++ L CA + AL GK++HG++VK G + + NAL+ MY KCGSI +F M
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG-Q 390
KD+ SWNTM+AGYS +G E A+ F+ M R ++PD T V++LS CSH+GL +G Q
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 391 KFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD 450
F+ + QDYGV P+ +HYAC+VD+LGR+G L++A + +NMP + +IWG+LL + R+
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 451 GNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSW 510
GN LAETAA+++F +EP N+G YV+LSN+YA +G W V ++R M +G+KK G SW
Sbjct: 592 GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSW 651
Query: 511 IQIKQRIHTFVAGGSSDFRSSA-EYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMW 569
I+I+ + HTF G +F E L +K +GY+ T VVLHD+ EE K
Sbjct: 652 IEIQNKTHTFSVG--DEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERM 709
Query: 570 VCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHH 629
V HSERLA + ++ +G PIR+ KNLRVC DCH+ +K ++R+T RLI+LRD NRFHH
Sbjct: 710 VRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHH 769
Query: 630 FENGTCSCMDHW 641
F++G+CSC D+W
Sbjct: 770 FKDGSCSCGDYW 781
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 149/321 (46%), Gaps = 43/321 (13%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP 165
+I+ Y G + AR++F DE + W M GY RNR +A ++ M R V
Sbjct: 101 MISGYLRNGEFELARKLF-DEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS 159
Query: 166 GNFAFS-VALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRV 224
N S A C D D+R + R E + V NALL YV+ + +
Sbjct: 160 WNTMLSGYAQNGCVD--DAR-------SVFDRMPEKNDVSWNALLSAYVQNSKMEEACML 210
Query: 225 FEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL-- 282
F+ +VSWN L+ GF + K+ E F +M +++ + SW T+ T ++
Sbjct: 211 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVV--SWNTIITGYAQSGKIDE 268
Query: 283 ----------------TALHSGKEIHGQIVKSGK-------KADRPLLNALMDMYAKCGS 319
TA+ SG I ++V+ + + + NA++ Y +
Sbjct: 269 ARQLFDESPVQDVFTWTAMVSGY-IQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGER 327
Query: 320 IGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG 379
+ K++FD M +++++WNTM+ GY+ G+I +A +LFD+M + D +++ ++++G
Sbjct: 328 MEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAG 383
Query: 380 CSHSGLTSEGQKFFNLMQDYG 400
S SG + E + F M+ G
Sbjct: 384 YSQSGHSFEALRLFVQMEREG 404
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 156/334 (46%), Gaps = 26/334 (7%)
Query: 135 WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLA 194
W Y R EAL V++ M S N S L+ G+ + R + ++
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRN----GEFELARKLFDEMP 122
Query: 195 KRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLD 254
+RD V N +++ YV G +FE+MP+R+V SWNT+++G++ G V +
Sbjct: 123 ERD----LVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 255 AFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMY 314
F M K + SW L + +S E + KS + N L+ +
Sbjct: 179 VFDRMPEKNDV--SWNALLSAY-------VQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 315 AKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFV 374
K I ++ FD M +D+ SWNT++ GY+ +G+I++A LFDE S ++ D T+
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE---SPVQ-DVFTWT 285
Query: 375 SLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
+++SG + + E ++ F+ M + + + A L + + +++ A + MP +
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPE---RNEVSWNAMLAGYV-QGERMEMAKELFDVMPCR 341
Query: 435 LSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEP 468
+ S W +++ G +S A+ +++ + +P
Sbjct: 342 -NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/577 (38%), Positives = 341/577 (59%), Gaps = 41/577 (7%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPES---VWVAMAIGYSRNRLSKEALLVYRDMLA 160
S L+ Y+ G L+E R+ + E E+ W + G++R+ KEA+++++ +
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECG---- 216
P S L + D +GR IH + K+ D+ V +A++ Y + G
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 217 ---------------CSGDV------------LRVFEVMPQR----NVVSWNTLIAGFSG 245
C+ + L +FE+ ++ NVVSW ++IAG +
Sbjct: 306 IISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
GK E L+ FR MQ+ G+ + +T+ ++LP C + AL G+ HG V+ +
Sbjct: 366 NGKDIEALELFREMQVA-GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
+ +AL+DMYAKCG I + VF+ M +K+L WN+++ G+S++G+ ++ + +F+ ++R+
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484
Query: 366 IRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEA 424
++PD I+F SLLS C GLT EG K+F +M ++YG++P LEHY+C+V++LGR+GKL EA
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
Query: 425 LTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADA 484
+ + MP + +WG+LLNSCRL NV LAE AAE+LF +EP N G YV+LSNIYA
Sbjct: 545 YDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAK 604
Query: 485 GMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNA 544
GMW V +R M G+KK+ GCSWIQ+K R++T +AG S + K+ + +S
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKM-DEISKE 663
Query: 545 IKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDC 604
++ SG+ PN D LHD+ E+ + + GHSE+LA VF L++T G P+++ KNLR+C DC
Sbjct: 664 MRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDC 723
Query: 605 HSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
H+ +K +S R I +RDTNRFHHF++G CSC D W
Sbjct: 724 HAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 199/476 (41%), Gaps = 79/476 (16%)
Query: 102 LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
+ +KLI YS ++A V Q DP + ++ ++ +L +++ V+ M +
Sbjct: 52 ISAKLIASYSNYNCFNDADLVLQSIP-DPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSH 110
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV 221
+ P + K C ++ +VG+ IH + D V ++ Y+ CG GD
Sbjct: 111 GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDA 170
Query: 222 LRVFEVMPQR-----------------------------------NVVSWNTLIAGFSGQ 246
+VF+ M + N+VSWN +++GF+
Sbjct: 171 RKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS 230
Query: 247 GKVFETLDAFRAMQLKEGMGF--SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADR 304
G E + F+ + +GF +T+++VLP L+ G+ IHG ++K G D+
Sbjct: 231 GYHKEAVVMFQKIH---HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDK 287
Query: 305 PLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRS 364
+++A++DMY K G + +F+ E + N + G S NG ++KA+++F+
Sbjct: 288 CVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQ 347
Query: 365 NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQP----------------SLEH- 407
+ + +++ S+++GC+ +G E + F MQ GV+P +L H
Sbjct: 348 TMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG 407
Query: 408 ------------------YACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRL 449
+ L+D+ + G+++ + V MP K + W SL+N +
Sbjct: 408 RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSM 466
Query: 450 DGNVSLAETAAERLF--EIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIK 503
G + E L ++P+ +LS EG K + M GIK
Sbjct: 467 HGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK 522
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 1/233 (0%)
Query: 190 HAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKV 249
HA++ K + D ++ L+ Y C D V + +P + S+++LI +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 250 FETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNA 309
+++ F M G+ L + +CA+L+A GK+IH SG D + +
Sbjct: 98 TQSIGVFSRM-FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 310 LMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPD 369
+ MY +CG +G +KVFD M KD+ + + +L Y+ G +E+ + + EM S I +
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 370 GITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLD 422
+++ +LSG + SG E F + G P + ++ +G S L+
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 269
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/615 (35%), Positives = 352/615 (57%), Gaps = 11/615 (1%)
Query: 32 PLNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQHL 89
P N ++ ++ ++AL + + + + LL C L+ G+ +H +
Sbjct: 86 PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 90 LHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV---WVAMAIGYSRNR 146
+ + +++ LI LY+ C RL AR VF E PE W A+ Y++N
Sbjct: 146 F--RLGFDADVFVQNGLIALYAKCRRLGSARTVF--EGLPLPERTIVSWTAIVSAYAQNG 201
Query: 147 LSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNN 206
EAL ++ M V+P A L A T + D + GR+IHA + K E + +
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 207 ALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMG 266
+L Y +CG +F+ M N++ WN +I+G++ G E +D F M + + +
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM-INKDVR 320
Query: 267 FSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKV 326
I++T+ + CAQ+ +L + ++ + +S + D + +AL+DM+AKCGS+ + V
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 380
Query: 327 FDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLT 386
FD +D+ W+ M+ GY ++G+ +AI L+ M R + P+ +TF+ LL C+HSG+
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 440
Query: 387 SEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
EG FFN M D+ + P +HYAC++D+LGR+G LD+A V + MP++ ++WG+LL++
Sbjct: 441 REGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 447 CRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
C+ +V L E AA++LF I+P+N G+YV LSN+YA A +W+ V VR M +G+ KD
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
Query: 507 GCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMK 566
GCSW++++ R+ F G S R E + + + +K+ G++ N D LHD+N+E
Sbjct: 561 GCSWVEVRGRLEAFRVGDKSHPRYE-EIERQVEWIESRLKEGGFVANKDASLHDLNDEEA 619
Query: 567 VMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNR 626
+C HSER+A + LI T G P+RITKNLR CV+CH+ K +S++ R IV+RDTNR
Sbjct: 620 EETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNR 679
Query: 627 FHHFENGTCSCMDHW 641
FHHF++G CSC D+W
Sbjct: 680 FHHFKDGVCSCGDYW 694
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 178/328 (54%), Gaps = 4/328 (1%)
Query: 102 LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
L +KLI S G + AR+VF D+ P W A+ GYSRN ++ALL+Y +M
Sbjct: 55 LITKLIHASSSFGDITFARQVF-DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLA 113
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV 221
V P +F F LKAC+ + ++GR +HAQ+ + +AD V N L+ Y +C G
Sbjct: 114 RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSA 173
Query: 222 LRVFE--VMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPIC 279
VFE +P+R +VSW +++ ++ G+ E L+ F M+ K + W+ L +VL
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR-KMDVKPDWVALVSVLNAF 232
Query: 280 AQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWN 339
L L G+ IH +VK G + + LL +L MYAKCG + K +FD M+S +L WN
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 340 TMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDY 399
M++GY+ NG +AID+F EMI ++RPD I+ S +S C+ G + + + +
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 400 GVQPSLEHYACLVDILGRSGKLDEALTV 427
+ + + L+D+ + G ++ A V
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLV 380
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%)
Query: 289 KEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSIN 348
K+IH +++ G + L+ L+ + G I + ++VFD + + WN ++ GYS N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHY 408
+ A+ ++ M + + PD TF LL CS G+ + G +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 409 ACLVDILGRSGKLDEALTVARNMPM 433
L+ + + +L A TV +P+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPL 182
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/573 (38%), Positives = 338/573 (58%), Gaps = 9/573 (1%)
Query: 72 LCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPP 131
+C L ++LH + L K + N + + + Y+ CG L A+RVF
Sbjct: 404 VCFHESFLPSLKELHCYSL--KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTV 461
Query: 132 ESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHA 191
S W A+ G++++ + +L + M + P +F L AC+ + R+G+ +H
Sbjct: 462 NS-WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 520
Query: 192 QLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFE 251
+ + E D V ++L Y+ CG V +F+ M +++VSWNT+I G+ G
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 580
Query: 252 TLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALM 311
L FR M L G+ I++ V C+ L +L G+E H +K + D + +L+
Sbjct: 581 ALGVFRQMVLY-GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLI 639
Query: 312 DMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGI 371
DMYAK GSI KVF+G++ K SWN M+ GY I+G ++AI LF+EM R+ PD +
Sbjct: 640 DMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDL 699
Query: 372 TFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEAL-TVAR 429
TF+ +L+ C+HSGL EG ++ + M+ +G++P+L+HYAC++D+LGR+G+LD+AL VA
Sbjct: 700 TFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 759
Query: 430 NMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEG 489
M + IW SLL+SCR+ N+ + E A +LFE+EP NYV+LSN+YA G WE
Sbjct: 760 EMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWED 819
Query: 490 VKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLK-IWNALSNAIKDS 548
V++VR+ M ++KDAGCSWI++ +++ +FV G F E +K +W+ L I
Sbjct: 820 VRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVG--ERFLDGFEEIKSLWSILEMKISKM 877
Query: 549 GYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWM 608
GY P+T V HD++EE K+ + GHSE+LA + LI T G IR+ KNLR+CVDCH+
Sbjct: 878 GYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAA 937
Query: 609 KAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
K +S+V R IV+RD RFHHF+NG CSC D+W
Sbjct: 938 KLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 198/379 (52%), Gaps = 18/379 (4%)
Query: 37 LKSLCKSGKLEEALRLIE--------SPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQH 88
+ + C++G L+++ R ++ S + E + LL RK +E G+K+HQ
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQ- 108
Query: 89 LLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLS 148
L+ R+ + L +++IT+Y++CG D++R VF D W A+ YSRN L
Sbjct: 109 LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVF-DALRSKNLFQWNAVISSYSRNELY 167
Query: 149 KEALLVYRDMLARS-VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNA 207
E L + +M++ + + P +F + +KAC + D +G A+H + K D V NA
Sbjct: 168 DEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNA 227
Query: 208 LLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
L+ FY G D L++F++MP+RN+VSWN++I FS G E+ M + G G
Sbjct: 228 LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 287
Query: 268 ---SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
TL TVLP+CA+ + GK +HG VK + L NALMDMY+KCG I +
Sbjct: 288 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR--SNIRPDGITFVSLLSGCSH 382
+F +K++ SWNTM+ G+S G D+ +M+ +++ D +T ++ + C H
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Query: 383 SGLTSEGQKF--FNLMQDY 399
++ ++L Q++
Sbjct: 408 ESFLPSLKELHCYSLKQEF 426
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 211/476 (44%), Gaps = 60/476 (12%)
Query: 82 GQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIG 141
G L H L K ++E+ + + L++ Y G + +A ++F E S W +M
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVS-WNSMIRV 262
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAF-------SVALKACTDVGDSRVGRAIHAQLA 194
+S N S+E+ L+ +M+ E G+ AF L C + +G+ +H
Sbjct: 263 FSDNGFSEESFLLLGEMME---ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV 319
Query: 195 KRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLD 254
K + + V+NNAL+ Y +CGC + +F++ +NVVSWNT++ GFS +G T D
Sbjct: 320 KLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFD 379
Query: 255 AFRAMQLK-EGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDM 313
R M E + +T+ +P+C + L S KE+H +K + + NA +
Sbjct: 380 VLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVAS 439
Query: 314 YAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITF 373
YAKCGS+ Y ++VF G+ SK + SWN ++ G++ + ++D +M S + PD T
Sbjct: 440 YAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 374 VSLLSGCS-----------------------------------HSGLTSEGQKFFNLMQD 398
SLLS CS H G Q F+ M+D
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 399 YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPM---KLSGSIWGSLLNSCRLDGNVSL 455
SL + ++ ++G D AL V R M + +L G + +C L ++ L
Sbjct: 560 ----KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 615
Query: 456 A-ETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSW 510
E A L + ++A L ++YA G +V G+K+ + SW
Sbjct: 616 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV-----FNGLKEKSTASW 666
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/563 (38%), Positives = 348/563 (61%), Gaps = 11/563 (1%)
Query: 82 GQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIG 141
G+++H + + S + N + + L+ +Y+ CG L+ AR++F E S W +M
Sbjct: 255 GKEIHGYAMRSGFDSLVN--ISTALVDMYAKCGSLETARQLFDGMLERNVVS-WNSMIDA 311
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
Y +N KEA+L+++ ML V+P + + AL AC D+GD GR IH + + +
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
V N+L+ Y +C +F + R +VSWN +I GF+ G+ + L+ F M+
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 262 K--EGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGS 319
+ + F+++++ T + A+L+ H K IHG +++S + + AL+DMYAKCG+
Sbjct: 432 RTVKPDTFTYVSVITAI---AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 320 IGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG 379
I + +FD M + +T+WN M+ GY +G + A++LF+EM + I+P+G+TF+S++S
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Query: 380 CSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGS 438
CSHSGL G K F +M ++Y ++ S++HY +VD+LGR+G+L+EA MP+K + +
Sbjct: 549 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
Query: 439 IWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMA 498
++G++L +C++ NV+ AE AAERLFE+ P++ G +V+L+NIY A MWE V +VR M
Sbjct: 609 VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSML 668
Query: 499 IRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVL 558
+G++K GCS ++IK +H+F +G ++ S Y L IK++GY+P+T++VL
Sbjct: 669 RQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIY-AFLEKLICHIKEAGYVPDTNLVL 727
Query: 559 HDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRL 618
+ ++K + HSE+LA F L++T AG I + KNLRVC DCH+ K +S VT R
Sbjct: 728 -GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGRE 786
Query: 619 IVLRDTNRFHHFENGTCSCMDHW 641
IV+RD RFHHF+NG CSC D+W
Sbjct: 787 IVVRDMQRFHHFKNGACSCGDYW 809
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 194/375 (51%), Gaps = 17/375 (4%)
Query: 58 PTPYQDEDISQLLHLCISRKSLEHGQKLHQHL-LHSKGRVIENPTLKSKLITLYSVCGRL 116
P + + LL C S K +L Q L L K + + ++KL++L+ G +
Sbjct: 32 PANVYEHPAALLLERCSSLK------ELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSV 85
Query: 117 DEARRVFQDEEEDPPES----VWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSV 172
DEA RVF+ P +S ++ M G+++ +AL + M VEP + F+
Sbjct: 86 DEAARVFE-----PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY 140
Query: 173 ALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRN 232
LK C D + RVG+ IH L K D L Y +C + +VF+ MP+R+
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 233 VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIH 292
+VSWNT++AG+S G L+ ++M +E + S+IT+ +VLP + L + GKEIH
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSM-CEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 293 GQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIE 352
G ++SG + + AL+DMYAKCGS+ +++FDGM +++ SWN+M+ Y N +
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 353 KAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLV 412
+A+ +F +M+ ++P ++ + L C+ G G+ L + G+ ++ L+
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLI 379
Query: 413 DILGRSGKLDEALTV 427
+ + ++D A ++
Sbjct: 380 SMYCKCKEVDTAASM 394
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 120/246 (48%), Gaps = 2/246 (0%)
Query: 201 DQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQ 260
+ L+ + G + RVFE + + V ++T++ GF+ + + L F M+
Sbjct: 68 EHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMR 127
Query: 261 LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI 320
+ + T +L +C L GKEIHG +VKSG D + L +MYAKC +
Sbjct: 128 YDDVEPVVY-NFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQV 186
Query: 321 GYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGC 380
+KVFD M +DL SWNT++AGYS NG A+++ M N++P IT VS+L
Sbjct: 187 NEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAV 246
Query: 381 SHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIW 440
S L S G++ G + LVD+ + G L+ A + M ++ + W
Sbjct: 247 SALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSW 305
Query: 441 GSLLNS 446
S++++
Sbjct: 306 NSMIDA 311
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKD 334
+L C+ L L ++I + K+G + L+ ++ + GS+ +VF+ ++SK
Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 335 LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFN 394
++TML G++ ++KA+ F M ++ P F LL C G++
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 395 LMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMP 432
L+ G L L ++ + +++EA V MP
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/610 (36%), Positives = 359/610 (58%), Gaps = 19/610 (3%)
Query: 44 GKLEEALRLIESPNPTPYQDED--ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPT 101
G EA+R + ++ + +S + C ++L G++LH + S G V +
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-GLVDD--- 303
Query: 102 LKSKLITLYSVC---GRLDEARRVFQDEEEDPPESVWVAMAIGYSRN-RLSKEALLVYRD 157
++ L+ +Y+ C G +D+ R+VF D ED W A+ GY +N L+ EA+ ++ +
Sbjct: 304 VECSLVDMYAKCSADGSVDDCRKVF-DRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362
Query: 158 MLARS-VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECG 216
M+ + VEP +F FS A KAC ++ D RVG+ + Q KR ++ V N+++ +V+
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422
Query: 217 CSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL 276
D R FE + ++N+VS+NT + G + + FE + + +G S T ++L
Sbjct: 423 RMEDAQRAFESLSEKNLVSYNTFLDG-TCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 277 PICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT 336
A + ++ G++IH Q+VK G ++P+ NAL+ MY+KCGSI +VF+ ME++++
Sbjct: 482 SGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI 541
Query: 337 SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM 396
SW +M+ G++ +G + ++ F++MI ++P+ +T+V++LS CSH GL SEG + FN M
Sbjct: 542 SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601
Query: 397 -QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSL 455
+D+ ++P +EHYAC+VD+L R+G L +A MP + +W + L +CR+ N L
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTEL 661
Query: 456 AETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQ 515
+ AA ++ E++PN Y+ LSNIYA AG WE +R M R + K+ GCSWI++
Sbjct: 662 GKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGD 721
Query: 516 RIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVM----WVC 571
+IH F G ++ + Y ++ + L IK GY+P+TD+VLH + EE +
Sbjct: 722 KIHKFYVGDTAHPNAHQIYDEL-DRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLY 780
Query: 572 GHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFE 631
HSE++A F LI T P+R+ KNLRVC DCH+ MK +S V+ R IVLRD NRFHHF+
Sbjct: 781 QHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFK 840
Query: 632 NGTCSCMDHW 641
+G CSC D+W
Sbjct: 841 DGKCSCNDYW 850
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 197/433 (45%), Gaps = 18/433 (4%)
Query: 49 ALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLIT 108
AL L+ P S LL CI + G+ +H L+ + + L + LI+
Sbjct: 48 ALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFD--IEPDSVLYNSLIS 105
Query: 109 LYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPG 166
LYS G +A VF+ V W AM Y N +A+ V+ + L + P
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Query: 167 NFAFSVALKACTDVGDSRVGRAIHAQLAKRDE-EADQVVNNALLRFYVECGCS-GDVLRV 224
++ ++ ++AC++ VGR L K E+D V +L+ +V+ S + +V
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 225 FEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTA 284
F+ M + NVV+W +I G E + F M L G TL++V CA+L
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL-SGFESDKFTLSSVFSACAELEN 284
Query: 285 LHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC---GSIGYCKKVFDGMESKDLTSWNTM 341
L GK++H ++SG D +L+DMYAKC GS+ C+KVFD ME + SW +
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 342 LAGYSINGQI-EKAIDLFDEMI-RSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDY 399
+ GY N + +AI+LF EMI + ++ P+ TF S C + G++
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 400 GVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETA 459
G+ + ++ + +S ++++A ++ K S L +CR N++ E A
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR---NLNF-EQA 458
Query: 460 AERLFEIEPNNAG 472
+ L EI G
Sbjct: 459 FKLLSEITERELG 471
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/599 (38%), Positives = 346/599 (57%), Gaps = 21/599 (3%)
Query: 54 ESPNPTPYQDED-----ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIE-----NPTLK 103
E +P Y +E + ++L LC ++ + H G++I + TL
Sbjct: 47 EEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACH-------GKIIRIDLEGDVTLL 99
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
+ LI YS CG ++ AR+VF E S W M Y+RNR+ EAL ++ +M
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVS-WNTMIGLYTRNRMESEALDIFLEMRNEGF 158
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR 223
+ F S L AC D+ + +H K + + V ALL Y +CG D ++
Sbjct: 159 KFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQ 218
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLT 283
VFE M ++ V+W++++AG+ E L +R Q + + + TL++V+ C+ L
Sbjct: 219 VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ-RMSLEQNQFTLSSVICACSNLA 277
Query: 284 ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLA 343
AL GK++H I KSG ++ + ++ +DMYAKCGS+ +F ++ K+L WNT+++
Sbjct: 278 ALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIIS 337
Query: 344 GYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQ 402
G++ + + ++ + LF++M + + P+ +TF SLLS C H+GL EG++FF LM+ YG+
Sbjct: 338 GFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLS 397
Query: 403 PSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAER 462
P++ HY+C+VDILGR+G L EA + +++P + SIWGSLL SCR+ N+ LAE AAE+
Sbjct: 398 PNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEK 457
Query: 463 LFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVA 522
LFE+EP NAGN+V+LSNIYA WE + + R+++ +KK G SWI IK ++HTF
Sbjct: 458 LFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSV 517
Query: 523 GGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFA 582
G S R E + L + GY P+ + LHD+ K + HSE+LA VF
Sbjct: 518 GESGHPRIR-EICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFG 576
Query: 583 LIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
L+ P+RI KNLR+CVDCH +MKA S TRR I++RD NRFHHF +G CSC D W
Sbjct: 577 LMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/610 (36%), Positives = 344/610 (56%), Gaps = 8/610 (1%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSK 93
N + C+SG +EAL L S + LL C G +H + + K
Sbjct: 220 NAMISGYCQSGNAKEALTL--SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI--K 275
Query: 94 GRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALL 153
+ + +KLI LY+ GRL + ++VF D W ++ Y N A+
Sbjct: 276 HGLESELFVSNKLIDLYAEFGRLRDCQKVF-DRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 154 VYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHA-QLAKRDEEADQVVNNALLRFY 212
++++M ++P + +GD R R++ L K D + NA++ Y
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394
Query: 213 VECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
+ G VF +P +V+SWNT+I+G++ G E ++ + M+ + + + T
Sbjct: 395 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES 332
+VLP C+Q AL G ++HG+++K+G D ++ +L DMY KCG + +F +
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 333 KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKF 392
+ WNT++A + +G EKA+ LF EM+ ++PD ITFV+LLS CSHSGL EGQ
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574
Query: 393 FNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG 451
F +MQ DYG+ PSL+HY C+VD+ GR+G+L+ AL ++M ++ SIWG+LL++CR+ G
Sbjct: 575 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634
Query: 452 NVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWI 511
NV L + A+E LFE+EP + G +V+LSN+YA AG WEGV +R + +G++K G S +
Sbjct: 635 NVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
Query: 512 QIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVC 571
++ ++ F G + Y ++ AL +K GY+P+ VL D+ ++ K +
Sbjct: 695 EVDNKVEVFYTGNQTHPMYEEMYREL-TALQAKLKMIGYVPDHRFVLQDVEDDEKEHILM 753
Query: 572 GHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFE 631
HSERLA FALI T A IRI KNLRVC DCHS K +S++T R I++RD+NRFHHF+
Sbjct: 754 SHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFK 813
Query: 632 NGTCSCMDHW 641
NG CSC D+W
Sbjct: 814 NGVCSCGDYW 823
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 169/365 (46%), Gaps = 38/365 (10%)
Query: 41 CKSGKLEEALRLIES------PNPTPYQD-----------EDISQLLHLCISRKSLEHGQ 83
CK G+ L+ I S + QD +D+ L C +L+ +
Sbjct: 15 CKGGRFTRVLQSIGSVIREFSASANALQDCWKNGNESKEIDDVHTLFRYC---TNLQSAK 71
Query: 84 KLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYS 143
LH L+ SK I+N + +KL+ LY G + AR F D ++ W M GY
Sbjct: 72 CLHARLVVSKQ--IQNVCISAKLVNLYCYLGNVALARHTF-DHIQNRDVYAWNLMISGYG 128
Query: 144 RNRLSKEALLVYR-DMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQ 202
R S E + + ML+ + P F LKAC V D G IH K D
Sbjct: 129 RAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDV 185
Query: 203 VVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETL---DAFRAM 259
V +L+ Y G+ +F+ MP R++ SWN +I+G+ G E L + RAM
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM 245
Query: 260 QLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGS 319
+T+ ++L C + + G IH +K G +++ + N L+D+YA+ G
Sbjct: 246 DS--------VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR 297
Query: 320 IGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG 379
+ C+KVFD M +DL SWN+++ Y +N Q +AI LF EM S I+PD +T +SL S
Sbjct: 298 LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASI 357
Query: 380 CSHSG 384
S G
Sbjct: 358 LSQLG 362
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 143/301 (47%), Gaps = 19/301 (6%)
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNV 233
+ CT++ + + +HA+L + + ++ L+ Y G F+ + R+V
Sbjct: 61 FRYCTNL---QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDV 117
Query: 234 VSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHG 293
+WN +I+G+ G E + F L G+ + T +VL C + G +IH
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHC 174
Query: 294 QIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEK 353
+K G D + +L+ +Y++ ++G + +FD M +D+ SWN M++GY +G ++
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 354 AIDLFDEMIRSNIRP-DGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLV 412
A+ L + +R D +T VSLLS C+ +G + G + +G++ L L+
Sbjct: 235 ALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 413 DILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGN----VSLAETAAERLFEIEP 468
D+ G+L + V M ++ S W S++ + L+ +SL + RL I+P
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLIS-WNSIIKAYELNEQPLRAISLFQEM--RLSRIQP 346
Query: 469 N 469
+
Sbjct: 347 D 347
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/621 (36%), Positives = 359/621 (57%), Gaps = 19/621 (3%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQ--LLHLCISRKSLEHGQKLHQHLLH 91
N + L +SG EAL S S + C S + G++ HQ
Sbjct: 45 NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSK 149
+ + + S LI +YS CG+L++AR+VF +E P ++ W +M GY N +
Sbjct: 105 FGYQ--SDIFVSSALIVMYSTCGKLEDARKVF---DEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 150 EALLVYRDMLARSVEPGNFAF------SVALKACTDVGDSRVGRAIHAQLAKRDEEADQV 203
+A+ +++D+L + + F + AC+ V + +IH+ + KR +
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 204 VNNALLRFYVECGCSGDVL--RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
V N LL Y + G G + ++F+ + ++ VS+N++++ ++ G E + FR +
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
+ + F+ ITL+TVL + AL GK IH Q+++ G + D + +++DMY KCG +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
+K FD M++K++ SW M+AGY ++G KA++LF MI S +RP+ ITFVS+L+ CS
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 382 HSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIW 440
H+GL EG ++FN M+ +GV+P LEHY C+VD+LGR+G L +A + + M MK IW
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 441 GSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIR 500
SLL +CR+ NV LAE + RLFE++ +N G Y++LS+IYADAG W+ V+RVR +M R
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 501 GIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHD 560
G+ K G S +++ +H F+ G + Y + L+ + ++GY+ NT V HD
Sbjct: 520 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIY-EFLAELNRKLLEAGYVSNTSSVCHD 578
Query: 561 INEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIV 620
++EE K M + HSE+LA F +++T G + + KNLRVC DCH+ +K +S++ R V
Sbjct: 579 VDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFV 638
Query: 621 LRDTNRFHHFENGTCSCMDHW 641
+RD RFHHF++G CSC D+W
Sbjct: 639 VRDAKRFHHFKDGGCSCGDYW 659
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 166/330 (50%), Gaps = 9/330 (2%)
Query: 135 WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLA 194
W ++ +R+ S EALL + M S+ P +F A+KAC+ + D G+ H Q
Sbjct: 44 WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103
Query: 195 KRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLD 254
++D V++AL+ Y CG D +VF+ +P+RN+VSW ++I G+ G + +
Sbjct: 104 VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVS 163
Query: 255 AFRAMQLKE-----GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNA 309
F+ + + E M + L +V+ C+++ A + IH ++K G + N
Sbjct: 164 LFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNT 223
Query: 310 LMDMYAKCGS--IGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIR 367
L+D YAK G + +K+FD + KD S+N++++ Y+ +G +A ++F ++++ +
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283
Query: 368 P-DGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALT 426
+ IT ++L SHSG G+ + + G++ + ++D+ + G+++ A
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343
Query: 427 VARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
M K S W +++ + G+ + A
Sbjct: 344 AFDRMKNKNVRS-WTAMIAGYGMHGHAAKA 372
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/544 (37%), Positives = 320/544 (58%), Gaps = 5/544 (0%)
Query: 99 NPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDM 158
N + + L+ CG +++A ++F+ E+D W AM G ++N L+KEA+ +R+M
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS--WAAMIKGLAQNGLAKEAIECFREM 261
Query: 159 LARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCS 218
+ ++ + F L AC +G G+ IHA + + + + V +AL+ Y +C C
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 219 GDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPI 278
VF+ M Q+NVVSW ++ G+ G+ E + F MQ + G+ TL +
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ-RSGIDPDHYTLGQAISA 380
Query: 279 CAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSW 338
CA +++L G + HG+ + SG + N+L+ +Y KCG I ++F+ M +D SW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 339 NTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-Q 397
M++ Y+ G+ + I LFD+M++ ++PDG+T ++S CS +GL +GQ++F LM
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 398 DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAE 457
+YG+ PS+ HY+C++D+ RSG+L+EA+ MP W +LL++CR GN+ + +
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
Query: 458 TAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRI 517
AAE L E++P++ Y +LS+IYA G W+ V ++R M + +KK+ G SWI+ K ++
Sbjct: 561 WAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKL 620
Query: 518 HTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERL 577
H+F A S Y K+ L+N I D+GY P+T V HD+ E +KV + HSERL
Sbjct: 621 HSFSADDESSPYLDQIYAKL-EELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERL 679
Query: 578 AAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSC 637
A F LI +G PIR+ KNLRVCVDCH+ K +S VT R I++RD RFH F++GTCSC
Sbjct: 680 AIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSC 739
Query: 638 MDHW 641
D W
Sbjct: 740 GDFW 743
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 138/292 (47%), Gaps = 9/292 (3%)
Query: 133 SVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQ 192
SV + IG S+ +++ +++ P F ++ + A + S R +
Sbjct: 7 SVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVF-- 64
Query: 193 LAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFET 252
R + + N LL Y + G ++ FE +P R+ V+WN LI G+S G V
Sbjct: 65 --DRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAA 122
Query: 253 LDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMD 312
+ A+ M + +TL T+L + + + GK+IHGQ++K G ++ + + L+
Sbjct: 123 VKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLY 182
Query: 313 MYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGIT 372
MYA G I KKVF G++ ++ +N+++ G G IE A+ LF M D ++
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-----EKDSVS 237
Query: 373 FVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
+ +++ G + +GL E + F M+ G++ + ++ G G ++E
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 94/215 (43%), Gaps = 13/215 (6%)
Query: 42 KSGKLEEALRLI-----ESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRV 96
++G+ EEA+++ +P Y + Q + C + SLE G + H + S +
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYT---LGQAISACANVSSLEEGSQFHGKAITSG--L 402
Query: 97 IENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYR 156
I T+ + L+TLY CG +D++ R+F + S W AM Y++ + E + ++
Sbjct: 403 IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS-WTAMVSAYAQFGRAVETIQLFD 461
Query: 157 DMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN-NALLRFYVEC 215
M+ ++P + + AC+ G G+ + + + + ++ +
Sbjct: 462 KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521
Query: 216 GCSGDVLRVFEVMP-QRNVVSWNTLIAGFSGQGKV 249
G + +R MP + + W TL++ +G +
Sbjct: 522 GRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/597 (36%), Positives = 335/597 (56%), Gaps = 37/597 (6%)
Query: 78 SLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVA 137
SL GQ LH + K V + + + LI Y CG LD A +VF +E S W +
Sbjct: 146 SLSLGQSLHG--MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS-WNS 202
Query: 138 MAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD 197
M G+ + +AL +++ M + V+ + L AC + + GR + + + +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 198 EEADQVVNNALLRFYVECGCSGDVLRVFEVM----------------------------- 228
+ + NA+L Y +CG D R+F+ M
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 229 --PQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALH 286
PQ+++V+WN LI+ + GK E L F +QL++ M + ITL + L CAQ+ AL
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 287 SGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYS 346
G+ IH I K G + + + +AL+ MY+KCG + ++VF+ +E +D+ W+ M+ G +
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 347 INGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ-DYGVQPSL 405
++G +A+D+F +M +N++P+G+TF ++ CSH+GL E + F+ M+ +YG+ P
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 406 EHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE 465
+HYAC+VD+LGRSG L++A+ MP+ S S+WG+LL +C++ N++LAE A RL E
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 466 IEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGS 525
+EP N G +V+LSNIYA G WE V +R+ M + G+KK+ GCS I+I IH F++G +
Sbjct: 563 LEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDN 622
Query: 526 SDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDI-NEEMKVMWVCGHSERLAAVFALI 584
+ S Y K+ + +K +GY P VL I EEMK + HSE+LA + LI
Sbjct: 623 AHPMSEKVYGKLHEVMEK-LKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLI 681
Query: 585 HTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
T A IR+ KNLRVC DCHS K +S++ R I++RD RFHHF NG CSC D W
Sbjct: 682 STEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 216/449 (48%), Gaps = 47/449 (10%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVC--GRLDEARRVFQDE 126
L+ C+S + L ++ H H++ + +P SKL + ++ L+ AR+VF DE
Sbjct: 36 LIERCVSLRQL---KQTHGHMIRTG--TFSDPYSASKLFAMAALSSFASLEYARKVF-DE 89
Query: 127 EEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARS-VEPGNFAFSVALKACTDVGDSRV 185
P W + Y+ ++ + DM++ S P + F +KA +V +
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
G+++H K +D V N+L+ Y CG +VF + +++VVSWN++I GF
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
+G + L+ F+ M+ E + S +T+ VL CA++ L G+++ I ++ +
Sbjct: 210 KGSPDKALELFKKME-SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSI------------------ 347
L NA++DMY KCGSI K++FD ME KD +W TML GY+I
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 348 -------------NGQIEKAIDLFDEM-IRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
NG+ +A+ +F E+ ++ N++ + IT VS LS C+ G G+
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 394 NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNV 453
+ ++ +G++ + + L+ + + G L+++ V ++ K +W +++ + G
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG-- 445
Query: 454 SLAETAAERLFEI-EPNNAGNYVMLSNIY 481
A + +++ E N N V +N++
Sbjct: 446 -CGNEAVDMFYKMQEANVKPNGVTFTNVF 473
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/534 (37%), Positives = 325/534 (60%), Gaps = 18/534 (3%)
Query: 116 LDEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVA 173
+D RRVF E P + V + + GY+++ + ++AL + R+M ++P +F S
Sbjct: 192 IDSVRRVF---EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNV 233
L ++ D G+ IH + ++ ++D + ++L+ Y + D RVF + R+
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 234 VSWNTLIAGFSGQGKVFETLDAFRAM---QLKEGMGFSWITLTTVLPICAQLTALHSGKE 290
+SWN+L+AG+ G+ E L FR M ++K G + ++V+P CA L LH GK+
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA----VAFSSVIPACAHLATLHLGKQ 364
Query: 291 IHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQ 350
+HG +++ G ++ + +AL+DMY+KCG+I +K+FD M D SW ++ G++++G
Sbjct: 365 LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 424
Query: 351 IEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYA 409
+A+ LF+EM R ++P+ + FV++L+ CSH GL E +FN M YG+ LEHYA
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 484
Query: 410 CLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPN 469
+ D+LGR+GKL+EA M ++ +GS+W +LL+SC + N+ LAE AE++F ++
Sbjct: 485 AVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSE 544
Query: 470 NAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSS--D 527
N G YV++ N+YA G W+ + ++R M +G++K CSWI++K + H FV+G S
Sbjct: 545 NMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPS 604
Query: 528 FRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTG 587
E+LK A+ ++ GY+ +T VLHD++EE K + GHSERLA F +I+T
Sbjct: 605 MDKINEFLK---AVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTE 661
Query: 588 AGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
G IR+TKN+R+C DCH +K +S++T R I++RD +RFHHF G CSC D+W
Sbjct: 662 PGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 211/442 (47%), Gaps = 48/442 (10%)
Query: 77 KSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWV 136
KS ++LH + ++ + T S +I++Y+ L EA +F+ + PP W
Sbjct: 19 KSKSQAKQLHAQFIRTQSL---SHTSASIVISIYTNLKLLHEALLLFK-TLKSPPVLAWK 74
Query: 137 AMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKR 196
++ ++ L +AL + +M A P + F LK+CT + D R G ++H + +
Sbjct: 75 SVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 197 DEEADQVVNNALLRFYVE--------------------CGCSGD---------------- 220
+ D NAL+ Y + SGD
Sbjct: 135 GMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDS 194
Query: 221 VLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICA 280
V RVFEVMP+++VVS+NT+IAG++ G + L R M + S+ TL++VLPI +
Sbjct: 195 VRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF-TLSSVLPIFS 253
Query: 281 QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNT 340
+ + GKEIHG +++ G +D + ++L+DMYAK I ++VF + +D SWN+
Sbjct: 254 EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNS 313
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
++AGY NG+ +A+ LF +M+ + ++P + F S++ C+H G++ + G
Sbjct: 314 LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGN----VSLA 456
++ + LVD+ + G + A + M + L W +++ L G+ VSL
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 457 ETAAERLFEIEPNNAGNYVMLS 478
E + ++PN +L+
Sbjct: 433 EEMKRQ--GVKPNQVAFVAVLT 452
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 150/325 (46%), Gaps = 8/325 (2%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDED--ISQLLHLCISRKSLEHGQKLHQHLLH 91
N + +SG E+ALR++ T + + +S +L + + G+++H +++
Sbjct: 211 NTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIR 270
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
KG + + + S L+ +Y+ R++++ RVF S W ++ GY +N EA
Sbjct: 271 -KG-IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS-WNSLVAGYVQNGRYNEA 327
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
L ++R M+ V+PG AFS + AC + +G+ +H + + ++ + +AL+
Sbjct: 328 LRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDM 387
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
Y +CG ++F+ M + VSW +I G + G E + F M+ ++G+ + +
Sbjct: 388 YSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK-RQGVKPNQVA 446
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVK-SGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM 330
VL C+ + + + K G + A+ D+ + G + M
Sbjct: 447 FVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
Query: 331 ESKDLTS-WNTMLAGYSINGQIEKA 354
+ S W+T+L+ S++ +E A
Sbjct: 507 CVEPTGSVWSTLLSSCSVHKNLELA 531
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/613 (35%), Positives = 358/613 (58%), Gaps = 13/613 (2%)
Query: 34 NPTLKSLCKSGKLEEALRLIESP--NPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLH 91
N + +G EAL + S N + + ++ LC + K L ++LH ++
Sbjct: 264 NSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV- 322
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
K + + +++ L+ YS C + +A R+F++ W AM G+ +N +EA
Sbjct: 323 -KYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
+ ++ +M + V P F +SV L A + S V HAQ+ K + E V ALL
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDA 437
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
YV+ G + +VF + +++V+W+ ++AG++ G+ + F + K G+ + T
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT-KGGIKPNEFT 496
Query: 272 LTTVLPICAQLTA-LHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM 330
+++L +CA A + GK+ HG +KS + + +AL+ MYAK G+I ++VF
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 331 ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQ 390
KDL SWN+M++GY+ +GQ KA+D+F EM + ++ DG+TF+ + + C+H+GL EG+
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 391 KFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRL 449
K+F++M +D + P+ EH +C+VD+ R+G+L++A+ V NMP +IW ++L +CR+
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRV 676
Query: 450 DGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCS 509
L AAE++ ++P ++ YV+LSN+YA++G W+ +VR++M R +KK+ G S
Sbjct: 677 HKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 736
Query: 510 WIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMW 569
WI++K + ++F+AG S Y+K+ + LS +KD GY P+T VL DI++E K
Sbjct: 737 WIEVKNKTYSFLAGDRSHPLKDQIYMKLED-LSTRLKDLGYEPDTSYVLQDIDDEHKEAV 795
Query: 570 VCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHH 629
+ HSERLA F LI T G P+ I KNLRVC DCH +K ++++ R IV+RD+NRFHH
Sbjct: 796 LAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHH 855
Query: 630 F-ENGTCSCMDHW 641
F +G CSC D W
Sbjct: 856 FSSDGVCSCGDFW 868
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 155/299 (51%), Gaps = 5/299 (1%)
Query: 82 GQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIG 141
G++LH + K +++ ++ + L+ Y + R+VF DE ++ W + G
Sbjct: 112 GRQLHCQCI--KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF-DEMKERNVVTWTTLISG 168
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
Y+RN ++ E L ++ M +P +F F+ AL + G G +H + K +
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
V+N+L+ Y++CG +F+ ++VV+WN++I+G++ G E L F +M+L
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
+ S + +V+ +CA L L +++H +VK G D+ + ALM Y+KC ++
Sbjct: 289 NY-VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 322 YCKKVFDGMES-KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG 379
++F + ++ SW M++G+ N E+A+DLF EM R +RP+ T+ +L+
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 147/291 (50%), Gaps = 3/291 (1%)
Query: 93 KGRVIENPTLKSKLITLYSVCG-RLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
K R+ N + ++ +V RL A +F ES ++++ G+SR+ ++EA
Sbjct: 19 KFRIYANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRES-YISLLFGFSRDGRTQEA 77
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
++ ++ +E FS LK + D GR +H Q K D V +L+
Sbjct: 78 KRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDT 137
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
Y++ D +VF+ M +RNVV+W TLI+G++ E L F MQ EG + T
Sbjct: 138 YMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ-NEGTQPNSFT 196
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME 331
L + A+ G ++H +VK+G P+ N+L+++Y KCG++ + +FD E
Sbjct: 197 FAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 256
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSH 382
K + +WN+M++GY+ NG +A+ +F M + +R +F S++ C++
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 111/228 (48%), Gaps = 2/228 (0%)
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLT 283
+F+ P R+ S+ +L+ GFS G+ E F + + GM ++VL + A L
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIH-RLGMEMDCSIFSSVLKVSATLC 107
Query: 284 ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLA 343
G+++H Q +K G D + +L+D Y K + +KVFD M+ +++ +W T+++
Sbjct: 108 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLIS 167
Query: 344 GYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQP 403
GY+ N ++ + LF M +P+ TF + L + G+ G + ++ G+
Sbjct: 168 GYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDK 227
Query: 404 SLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG 451
++ L+++ + G + +A + +K S W S+++ +G
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAANG 274
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/606 (37%), Positives = 334/606 (55%), Gaps = 37/606 (6%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDE-- 126
+L C K+ + GQ++H H+L K + + + LI++Y GRL++A +VF
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVL--KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197
Query: 127 --------------------------EEDPPESV--WVAMAIGYSRNRLSKEALLVYRDM 158
+E P + V W AM GY+ KEAL +++DM
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257
Query: 159 LARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCS 218
+ +V P + AC G +GR +H + ++ + NAL+ Y +CG
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 219 GDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPI 278
+FE +P ++V+SWNTLI G++ E L F+ M L+ G + +T+ ++LP
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM-LRSGETPNDVTMLSILPA 376
Query: 279 CAQLTALHSGKEIHGQIVK--SGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT 336
CA L A+ G+ IH I K G L +L+DMYAKCG I +VF+ + K L+
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 337 SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM 396
SWN M+ G++++G+ + + DLF M + I+PD ITFV LLS CSHSG+ G+ F M
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
Query: 397 -QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSL 455
QDY + P LEHY C++D+LG SG EA + M M+ G IW SLL +C++ GNV L
Sbjct: 497 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 556
Query: 456 AETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQ 515
E+ AE L +IEP N G+YV+LSNIYA AG W V + R ++ +G+KK GCS I+I
Sbjct: 557 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616
Query: 516 RIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSE 575
+H F+ G R+ Y + + ++ +G++P+T VL ++ EE K + HSE
Sbjct: 617 VVHEFIIGDKFHPRNREIY-GMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSE 675
Query: 576 RLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTC 635
+LA F LI T G + I KNLRVC +CH K +S++ +R I+ RD RFHHF +G C
Sbjct: 676 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 735
Query: 636 SCMDHW 641
SC D+W
Sbjct: 736 SCNDYW 741
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 201/419 (47%), Gaps = 41/419 (9%)
Query: 116 LDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALK 175
L A VF+ +E P +W M G++ + AL +Y M++ + P ++ F LK
Sbjct: 84 LPYAISVFKTIQE-PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK 142
Query: 176 ACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVV- 234
+C + G+ IH + K + D V+ +L+ YV+ G D +VF+ P R+VV
Sbjct: 143 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 202
Query: 235 ------------------------------SWNTLIAGFSGQGKVFETLDAFRAMQLKEG 264
SWN +I+G++ G E L+ F+ M +K
Sbjct: 203 YTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM-MKTN 261
Query: 265 MGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
+ T+ TV+ CAQ ++ G+++H I G ++ ++NAL+D+Y+KCG +
Sbjct: 262 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 321
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
+F+ + KD+ SWNT++ GY+ ++A+ LF EM+RS P+ +T +S+L C+H G
Sbjct: 322 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 381
Query: 385 LTSEGQKFFNLMQD---YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWG 441
G ++ ++ D GV + L+D+ + G ++ A V ++ K S S W
Sbjct: 382 AIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK-SLSSWN 439
Query: 442 SLLNSCRLDG--NVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMA 498
+++ + G + S + R I+P++ +V L + + +GM + + + M
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDI-TFVGLLSACSHSGMLDLGRHIFRTMT 497
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 42/295 (14%)
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD------VLRVFEVMPQRNVVSWNTLI 240
R IHAQ+ K + L+ F C S + VF+ + + N++ WNT+
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEF---CILSPHFEGLPYAISVFKTIQEPNLLIWNTMF 106
Query: 241 AGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGK 300
G + L + M + G+ + T VL CA+ A G++IHG ++K G
Sbjct: 107 RGHALSSDPVSALKLYVCM-ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165
Query: 301 KADRPLLNALMDMYAKCGSI-----------------------GY--------CKKVFDG 329
D + +L+ MY + G + GY +K+FD
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG 389
+ KD+ SWN M++GY+ G ++A++LF +M+++N+RPD T V+++S C+ SG G
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 390 QKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
++ + D+G +L+ L+D+ + G+L+ A + +P K S W +L+
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS-WNTLI 339
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 23/280 (8%)
Query: 284 ALHSGKEIHGQIVKSGKKADRPLLNALMD---MYAKCGSIGYCKKVFDGMESKDLTSWNT 340
L S + IH Q++K G L+ L++ + + Y VF ++ +L WNT
Sbjct: 45 TLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNT 104
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
M G++++ A+ L+ MI + P+ TF +L C+ S EGQ+ + G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAA 460
L + L+ + ++G+L++A V P + S + +L+ G + E A
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS-YTALIKGYASRGYI---ENAQ 220
Query: 461 ERLFEIEPNNAGNYVMLSNIYADAGMW-EGVKRVREMMA----------IRGIKKDAGCS 509
+ EI + ++ + + YA+ G + E ++ ++MM + + A
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 510 WIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSG 549
I++ +++H ++ D LKI NAL + G
Sbjct: 281 SIELGRQVHLWI-----DDHGFGSNLKIVNALIDLYSKCG 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 46 LEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSK 105
+E LR E+PN D + +L C +++ G+ +H ++ V +L++
Sbjct: 355 FQEMLRSGETPN-----DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP 165
LI +Y+ CG ++ A +VF S W AM G++ + + + ++ M ++P
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSS-WNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 166 GNFAFSVALKACTDVGDSRVGRAIHAQLAK 195
+ F L AC+ G +GR I + +
Sbjct: 469 DDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/530 (38%), Positives = 312/530 (58%), Gaps = 12/530 (2%)
Query: 114 GRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVA 173
GR+DEAR +F DE + W M GY +N +A ++ V P S
Sbjct: 186 GRVDEAREIF-DEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWT 238
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNV 233
V + R+ A +L + + NA++ + G RVF+ M +RN
Sbjct: 239 SMLMGYVQNGRIEDA--EELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 234 VSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHG 293
SW T+I G E LD F MQ K+G+ ++ TL ++L +CA L +LH GK++H
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQ-KQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 294 QIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEK 353
Q+V+ D + + LM MY KCG + K +FD SKD+ WN++++GY+ +G E+
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEE 415
Query: 354 AIDLFDEM-IRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACL 411
A+ +F EM + + +P+ +TFV+ LS CS++G+ EG K + M+ +GV+P HYAC+
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475
Query: 412 VDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNA 471
VD+LGR+G+ +EA+ + +M ++ ++WGSLL +CR + +AE A++L EIEP N+
Sbjct: 476 VDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENS 535
Query: 472 GNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSS 531
G Y++LSN+YA G W V +R++M R ++K GCSW +++ ++H F GG +
Sbjct: 536 GTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQ 595
Query: 532 AEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMP 591
LKI + L ++++GY P+ LHD++EE KV + HSERLA +AL+ G+P
Sbjct: 596 ESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIP 655
Query: 592 IRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
IR+ KNLRVC DCH+ +K +S+V R I+LRD NRFHHF NG CSC D+W
Sbjct: 656 IRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 151/347 (43%), Gaps = 62/347 (17%)
Query: 100 PTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDML 159
P + IT S G++ EAR++F D + S W +M GY N + ++A ++ +M
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLF-DSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP 75
Query: 160 ARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSG 219
R++ + N L+ Y++ G
Sbjct: 76 DRNI---------------------------------------ISWNGLVSGYMKNGEID 96
Query: 220 DVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPIC 279
+ +VF++MP+RNVVSW L+ G+ GKV F M K + SW T +L
Sbjct: 97 EARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV--SW---TVMLIGF 151
Query: 280 AQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWN 339
Q + +++ I A +++ L K G + +++FD M + + +W
Sbjct: 152 LQDGRIDDACKLYEMIPDKDNIARTSMIHGL----CKEGRVDEAREIFDEMSERSVITWT 207
Query: 340 TMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDY 399
TM+ GY N +++ A +FD M +++ S+L G +G + ++ F +M
Sbjct: 208 TMVTGYGQNNRVDDARKIFDVMPEKT----EVSWTSMLMGYVQNGRIEDAEELFEVMP-- 261
Query: 400 GVQPSLEHYAC--LVDILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
V+P + AC ++ LG+ G++ +A V +M + S W +++
Sbjct: 262 -VKPVI---ACNAMISGLGQKGEIAKARRVFDSMKERNDAS-WQTVI 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 305 PLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRS 364
P N + ++ G I +K+FD +SK ++SWN+M+AGY N A LFDEM
Sbjct: 18 PTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR 77
Query: 365 NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
NI I++ L+SG +G E +K F+LM + V + LV +GK+D A
Sbjct: 78 NI----ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS----WTALVKGYVHNGKVDVA 129
Query: 425 LTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPN 469
++ MP K S W +L DG + A +L+E+ P+
Sbjct: 130 ESLFWKMPEKNKVS-WTVMLIGFLQDGRID----DACKLYEMIPD 169
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
+L +C S SL HG+++H L+ + V + + S L+T+Y CG L +++ +F D
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDV--DVYVASVLMTMYIKCGELVKSKLIF-DRFP 393
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDM-LARSVEPGNFAFSVALKACTDVGDSRVGR 187
+W ++ GY+ + L +EAL V+ +M L+ S +P F L AC+ G G
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL 453
Query: 188 AIHAQL 193
I+ +
Sbjct: 454 KIYESM 459
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/639 (35%), Positives = 350/639 (54%), Gaps = 48/639 (7%)
Query: 40 LCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHS---KGRV 96
LC L EA++L+ P L+ +C ++LE G+K+H+H+ S G V
Sbjct: 64 LCGQKLLREAVQLLGRAKKPPAST--YCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIV 121
Query: 97 IENPTLKSKLITLYSVCGRLDEARRVFQ------------------------------DE 126
I N +L+ +Y+ CG L +AR+VF DE
Sbjct: 122 IWN-----RLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 127 EEDPPESVWVAMAIGYSRNRLSKEALLVYRDML-ARSVEPGNFAFSVALKACTDVGDSRV 185
+ W AM GY + +EAL++Y M + P F S+A+ A V R
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
G+ IH + + ++D+V+ ++L+ Y +CGC + +F+ + +++VVSW ++I +
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
+ E F + + + T VL CA LT GK++HG + + G
Sbjct: 297 SSRWREGFSLFSEL-VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
++L+DMY KCG+I K V DG DL SW +++ G + NGQ ++A+ FD +++S
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 366 IRPDGITFVSLLSGCSHSGLTSEGQKFF-NLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
+PD +TFV++LS C+H+GL +G +FF ++ + + + + +HY CLVD+L RSG+ ++
Sbjct: 416 TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQL 475
Query: 425 LTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADA 484
+V MPMK S +W S+L C GN+ LAE AA+ LF+IEP N YV ++NIYA A
Sbjct: 476 KSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAA 535
Query: 485 GMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSD--FRSSAEYLKIWNALS 542
G WE ++R+ M G+ K G SW +IK++ H F+A +S + E+L+ L
Sbjct: 536 GKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLR---ELR 592
Query: 543 NAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCV 602
+K+ GY+P T +VLHD+ +E K + HSE+LA FA++ T G I++ KNLR CV
Sbjct: 593 KKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCV 652
Query: 603 DCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
DCH +K +S +T+R I +RD+ RFH FENG CSC D+W
Sbjct: 653 DCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/569 (37%), Positives = 327/569 (57%), Gaps = 11/569 (1%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
LL C K L G+ +H H+L S R + + + L+ +Y+ CG L+EAR+VF E
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIFR--HDIVMGNTLLNMYAKCGSLEEARKVF----E 119
Query: 129 DPPES---VWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV 185
P+ W + GYS++ +ALL + ML P F S +KA
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
G +H K +++ V +ALL Y G D VF+ + RN VSWN LIAG +
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
+ + L+ F+ M L++G S + ++ C+ L GK +H ++KSG+K
Sbjct: 240 RSGTEKALELFQGM-LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
N L+DMYAK GSI +K+FD + +D+ SWN++L Y+ +G ++A+ F+EM R
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 366 IRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEAL 425
IRP+ I+F+S+L+ CSHSGL EG ++ LM+ G+ P HY +VD+LGR+G L+ AL
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 426 TVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAG 485
MP++ + +IW +LLN+CR+ N L AAE +FE++P++ G +V+L NIYA G
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 478
Query: 486 MWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAI 545
W RVR+ M G+KK+ CSW++I+ IH FVA + E + W + I
Sbjct: 479 RWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQRE-EIARKWEEVLAKI 537
Query: 546 KDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCH 605
K+ GY+P+T V+ ++++ + + + HSE++A FAL++T G I I KN+RVC DCH
Sbjct: 538 KELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCH 597
Query: 606 SWMKAVSRVTRRLIVLRDTNRFHHFENGT 634
+ +K S+V R I++RDTNRFHHF++ +
Sbjct: 598 TAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%)
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES 332
T+L C L G+ +H I++S + D + N L++MYAKCGS+ +KVF+ M
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 333 KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKF 392
+D +W T+++GYS + + A+ F++M+R P+ T S++ + G +
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 393 FNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTV 427
G ++ + L+D+ R G +D+A V
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/658 (34%), Positives = 355/658 (53%), Gaps = 54/658 (8%)
Query: 34 NPTLKSLCKSGKLEEALRLIES-PNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQHLL 90
N ++S K GK + AL + N + ++I+ +L C S + G++LH +
Sbjct: 197 NSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 256
Query: 91 HSKGRVIENPTLKSKLITLYSVCGRLDEARRVF--------------------------- 123
S+ +I+N + + L+ +Y+ CG +DEA VF
Sbjct: 257 TSE--MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDA 314
Query: 124 -------QDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKA 176
Q+E+ W A GY++ L EAL V R ML+ ++P L
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374
Query: 177 CTDVGDSRVGRAIHA-------QLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMP 229
C VG G+ IH L K + +V N L+ Y +C +F+ +
Sbjct: 375 CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434
Query: 230 --QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF-SWITLTTVLPICAQLTALH 286
+R+VV+W +I G+S G + L+ M ++ + T++ L CA L AL
Sbjct: 435 PKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALR 494
Query: 287 SGKEIHGQIVKSGKKADRPLL--NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAG 344
GK+IH +++ + A PL N L+DMYAKCGSI + VFD M +K+ +W +++ G
Sbjct: 495 IGKQIHAYALRNQQNA-VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTG 553
Query: 345 YSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQP 403
Y ++G E+A+ +FDEM R + DG+T + +L CSHSG+ +G ++FN M+ +GV P
Sbjct: 554 YGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613
Query: 404 SLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERL 463
EHYACLVD+LGR+G+L+ AL + MPM+ +W + L+ CR+ G V L E AAE++
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKI 673
Query: 464 FEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAG 523
E+ N+ G+Y +LSN+YA+AG W+ V R+R +M +G+KK GCSW++ + TF G
Sbjct: 674 TELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVG 733
Query: 524 GSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFAL 583
+ + Y + + + IKD GY+P T LHD+++E K + HSE+LA + +
Sbjct: 734 DKTHPHAKEIYQVLLDHMQR-IKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGI 792
Query: 584 IHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+ T G IRITKNLRVC DCH+ +SR+ I+LRD++RFHHF+NG+CSC +W
Sbjct: 793 LTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 168/354 (47%), Gaps = 20/354 (5%)
Query: 55 SPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCG 114
+P TP +H C K++ + +HQ LL S G + N L S LI+ Y G
Sbjct: 27 APEITP-------PFIHKC---KTISQVKLIHQKLL-SFGILTLN--LTSHLISTYISVG 73
Query: 115 RLDEARRVFQDEEEDPPESV----WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAF 170
L A + + PP W ++ Y N + + L ++ M + S P N+ F
Sbjct: 74 CLSHAVSLLR---RFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTF 130
Query: 171 SVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQ 230
KAC ++ R G + HA ++ V NAL+ Y C D +VF+ M
Sbjct: 131 PFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSV 190
Query: 231 RNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKE 290
+VVSWN++I ++ GK L+ F M + G ITL VLP CA L GK+
Sbjct: 191 WDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQ 250
Query: 291 IHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQ 350
+H V S + + N L+DMYAKCG + VF M KD+ SWN M+AGYS G+
Sbjct: 251 LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGR 310
Query: 351 IEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPS 404
E A+ LF++M I+ D +T+ + +SG + GL E M G++P+
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 145/310 (46%), Gaps = 22/310 (7%)
Query: 208 LLRFYVECGCSGDVLRVFEVMPQRN--VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
L+ Y+ GC + + P + V WN+LI + G + L F M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMH----- 119
Query: 266 GFSWI----TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
SW T V C +++++ G+ H + +G ++ + NAL+ MY++C S+
Sbjct: 120 SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRS-NIRPDGITFVSLLSGC 380
+KVFD M D+ SWN+++ Y+ G+ + A+++F M RPD IT V++L C
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 381 SHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIW 440
+ G S G++ + ++ CLVD+ + G +DEA TV NM +K S W
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS-W 298
Query: 441 GSLLNSC----RLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGM-WEGVKRVRE 495
+++ R + V L E E +++ + + YA G+ +E + R+
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD---VVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 496 MMAIRGIKKD 505
M++ GIK +
Sbjct: 356 MLS-SGIKPN 364
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/558 (37%), Positives = 319/558 (57%), Gaps = 7/558 (1%)
Query: 82 GQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIG 141
G+ +H +++ + V + ++ + L +Y G EA ++F E S W M G
Sbjct: 316 GRDIHAYVITTGFAV--DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS-WTTMISG 372
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
Y N L +A+ YR M SV+P + L AC +GD G +H K +
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
+V N L+ Y +C C L +F +P++NV+SW ++IAG + FE L R Q+
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR--QM 490
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
K + + ITLT L CA++ AL GKEIH ++++G D L NAL+DMY +CG +
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
F+ + KD+TSWN +L GYS GQ ++LFD M++S +RPD ITF+SLL GCS
Sbjct: 551 TAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 609
Query: 382 HSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWG 441
S + +G +F+ M+DYGV P+L+HYAC+VD+LGR+G+L EA + MP+ ++WG
Sbjct: 610 KSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWG 669
Query: 442 SLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRG 501
+LLN+CR+ + L E +A+ +FE++ + G Y++L N+YAD G W V +VR MM G
Sbjct: 670 ALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENG 729
Query: 502 IKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDI 561
+ DAGCSW+++K ++H F++ + E + + + G ++ D
Sbjct: 730 LTVDAGCSWVEVKGKVHAFLSDDKYH-PQTKEINTVLEGFYEKMSEVGLTKISESSSMDE 788
Query: 562 NEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVL 621
E + CGHSER A F LI+T GMPI +TKNL +C +CH +K +S+ RR I +
Sbjct: 789 TEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISV 848
Query: 622 RDTNRFHHFENGTCSCMD 639
RD FHHF++G CSC D
Sbjct: 849 RDAEHFHHFKDGECSCGD 866
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 213/423 (50%), Gaps = 20/423 (4%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPYQ-DEDI-SQLLHLCISRKSLEHGQKLHQHLLHSKG 94
L LC +GKLEEA++L+ S DED+ L+ LC +++ E G K++ L S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 95 RVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLV 154
+ L + + ++ G L +A VF E S W + GY++ EA+ +
Sbjct: 126 SL--GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFS-WNVLVGGYAKQGYFDEAMCL 182
Query: 155 YRDML-ARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYV 213
Y ML V+P + F L+ C + D G+ +H + + E D V NAL+ YV
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYV 242
Query: 214 ECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS--WIT 271
+CG +F+ MP+R+++SWN +I+G+ G E L+ F AM+ G+ +T
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR---GLSVDPDLMT 299
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME 331
LT+V+ C L G++IH ++ +G D + N+L MY GS +K+F ME
Sbjct: 300 LTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME 359
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
KD+ SW TM++GY N +KAID + M + +++PD IT ++LS C+ G G +
Sbjct: 360 RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Query: 392 FFNLMQDYGVQPSLEHYAC----LVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
L ++ L Y L+++ + +D+AL + N+P K S W S++
Sbjct: 420 LHKL----AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGL 474
Query: 448 RLD 450
RL+
Sbjct: 475 RLN 477
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/614 (35%), Positives = 347/614 (56%), Gaps = 14/614 (2%)
Query: 32 PLNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQ--LLHLCISRKSLEHGQKLHQHL 89
P N L+ L E++ L S + + S +L C S GQ+LH H+
Sbjct: 20 PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 90 LHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV-WVAMAIGYSRNRLS 148
+KG P + + LI++Y CG + +AR+VF++ + SV + A+ GY+ N
Sbjct: 80 --TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
+A ++R M V + + CT +GR++H Q K +++ V N+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 209 LRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS 268
+ Y++CG R+F+ MP + +++WN +I+G+S G ++ L+ + M+ G+
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMK-SSGVCPD 256
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFD 328
TL +VL CA L A G E+ + +G + + NA + MYA+CG++ + VFD
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD 316
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSE 388
M K L SW M+ Y ++G E + LFD+MI+ IRPDG FV +LS CSHSGLT +
Sbjct: 317 IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDK 376
Query: 389 GQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
G + F M+ +Y ++P EHY+CLVD+LGR+G+LDEA+ +MP++ G++WG+LL +C
Sbjct: 377 GLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGAC 436
Query: 448 RLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAG 507
++ NV +AE A ++ E EPNN G YV++SNIY+D+ EG+ R+R MM R +K G
Sbjct: 437 KIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPG 496
Query: 508 CSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKV 567
S+++ K R+H F+AG S + E ++ + L ++ + N D D EE+
Sbjct: 497 YSYVEHKGRVHLFLAGDRSH-EQTEEVHRMLDELETSVMELA--GNMDC---DRGEEVSS 550
Query: 568 MWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRF 627
HSERLA F ++++ G I + KNLRVC DCH ++K VS++ R V+RD +RF
Sbjct: 551 T-TREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRF 609
Query: 628 HHFENGTCSCMDHW 641
H+F++G CSC D+W
Sbjct: 610 HYFKDGVCSCKDYW 623
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/539 (37%), Positives = 317/539 (58%), Gaps = 4/539 (0%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
+ L+++YS GRL++A ++F DE D W A+ GY+ + +EA+ +++ M+ V
Sbjct: 150 TSLLSIYSGSGRLNDAHKLF-DEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR 223
+P ++ L AC VGD G I + + + + + V L+ Y +CG
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLT 283
VF+ M ++++V+W+T+I G++ E ++ F M L+E + ++ L CA L
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM-LQENLKPDQFSIVGFLSSCASLG 327
Query: 284 ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLA 343
AL G+ I + + + NAL+DMYAKCG++ +VF M+ KD+ N ++
Sbjct: 328 ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 344 GYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ-DYGVQ 402
G + NG ++ + +F + + I PDG TF+ LL GC H+GL +G +FFN + Y ++
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
Query: 403 PSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAER 462
++EHY C+VD+ GR+G LD+A + +MPM+ + +WG+LL+ CRL + LAET +
Sbjct: 448 RTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKE 507
Query: 463 LFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVA 522
L +EP NAGNYV LSNIY+ G W+ VR+MM +G+KK G SWI+++ ++H F+A
Sbjct: 508 LIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLA 567
Query: 523 GGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFA 582
S S Y K+ + L N ++ G++P T+ V D+ EE K + HSE+LA
Sbjct: 568 DDKSHPLSDKIYAKLED-LGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALG 626
Query: 583 LIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
LI T G IR+ KNLRVC DCH MK +S++TRR IV+RD NRFH F NG+CSC D+W
Sbjct: 627 LISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 177/376 (47%), Gaps = 4/376 (1%)
Query: 59 TPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDE 118
P + Q+ L ++ H +++H L++ + + T L+ ++ R +
Sbjct: 6 VPSATSKVQQIKTLISVACTVNHLKQIHVSLINHH---LHHDTFLVNLLLKRTLFFRQTK 62
Query: 119 ARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACT 178
+ + P ++ ++ G+ N L E L ++ + + F F + LKACT
Sbjct: 63 YSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACT 122
Query: 179 DVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNT 238
++G +H+ + K D +LL Y G D ++F+ +P R+VV+W
Sbjct: 123 RASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTA 182
Query: 239 LIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKS 298
L +G++ G+ E +D F+ M ++ G+ + VL C + L SG+ I + +
Sbjct: 183 LFSGYTTSGRHREAIDLFKKM-VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM 241
Query: 299 GKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLF 358
+ + + L+++YAKCG + + VFD M KD+ +W+TM+ GY+ N ++ I+LF
Sbjct: 242 EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELF 301
Query: 359 DEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRS 418
+M++ N++PD + V LS C+ G G+ +L+ + +L L+D+ +
Sbjct: 302 LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC 361
Query: 419 GKLDEALTVARNMPMK 434
G + V + M K
Sbjct: 362 GAMARGFEVFKEMKEK 377
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/625 (34%), Positives = 344/625 (55%), Gaps = 39/625 (6%)
Query: 50 LRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITL 109
R++ TP + ++ C + LE G+K++ + +S V N + S L+ +
Sbjct: 224 FRMVRDEEVTP-NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV--NDLMVSALVDM 280
Query: 110 YSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFA 169
Y C +D A+R+F DE + AMA Y R L++EAL V+ M+ V P +
Sbjct: 281 YMKCNAIDVAKRLF-DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 170 FSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVF---- 225
A+ +C+ + + G++ H + + E+ + NAL+ Y++C R+F
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 226 ---------------------------EVMPQRNVVSWNTLIAGFSGQGKVF-ETLDAFR 257
E MP++N+VSWNT+I+G QG +F E ++ F
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV-QGSLFEEAIEVFC 458
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
+MQ +EG+ +T+ ++ C L AL K I+ I K+G + D L L+DM+++C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
G +F+ + ++D+++W + ++ G E+AI+LFD+MI ++PDG+ FV L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 378 SGCSHSGLTSEGQK-FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLS 436
+ CSH GL +G++ F+++++ +GV P HY C+VD+LGR+G L+EA+ + +MPM+ +
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 437 GSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREM 496
IW SLL +CR+ GNV +A AAE++ + P G+YV+LSN+YA AG W + +VR
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 497 MAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDV 556
M +G++K G S IQI+ + H F +G S + + +S G++P+
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDES-HPEMPNIEAMLDEVSQRASHLGHVPDLSN 757
Query: 557 VLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTR 616
VL D++E+ K+ + HSE+LA + LI + G IRI KNLRVC DCHS+ K S+V
Sbjct: 758 VLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYN 817
Query: 617 RLIVLRDTNRFHHFENGTCSCMDHW 641
R I+LRD NRFH+ G CSC D W
Sbjct: 818 REIILRDNNRFHYIRQGKCSCGDFW 842
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 186/393 (47%), Gaps = 7/393 (1%)
Query: 116 LDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALK 175
L A+ VF++ E ++ ++ GY+ + L EA+L++ M+ + P + F L
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 176 ACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVS 235
AC G IH + K D V N+L+ FY ECG +VF+ M +RNVVS
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 236 WNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI 295
W ++I G++ + + +D F M E + + +T+ V+ CA+L L +G++++ I
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 296 VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAI 355
SG + + +++AL+DMY KC +I K++FD + +L N M + Y G +A+
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 356 DLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDIL 415
+F+ M+ S +RPD I+ +S +S CS G+ + G + L+D+
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 416 GRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEP--NNAGN 473
+ + D A + M K + W S++ +G V AA FE P N
Sbjct: 383 MKCHRQDTAFRIFDRMSNK-TVVTWNSIVAGYVENGEVD----AAWETFETMPEKNIVSW 437
Query: 474 YVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
++S + + E ++ M + G+ D
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 191/427 (44%), Gaps = 35/427 (8%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSK 93
N ++ SG EA+ L + + + L KS G + H L K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 94 GRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL- 152
++ +++ L+ Y+ CG LD AR+VF DE + W +M GY+R +K+A+
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVF-DEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 153 LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFY 212
L +R + V P + + AC + D G ++A + E + ++ +AL+ Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 213 VECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
++C R+F+ N+ N + + + QG E L F M + G+ I++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM-MDSGVRPDRISM 340
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES 332
+ + C+QL + GK HG ++++G ++ + NAL+DMY KC ++FD M +
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 333 KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI-------------------------- 366
K + +WN+++AGY NG+++ A + F+ M NI
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 367 ------RPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGK 420
DG+T +S+ S C H G + + ++ G+Q + LVD+ R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 421 LDEALTV 427
+ A+++
Sbjct: 521 PESAMSI 527
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/590 (35%), Positives = 322/590 (54%), Gaps = 9/590 (1%)
Query: 53 IESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSV 112
IE P Y I L CI LE G+++H ++ + ++ N + S LI +Y+
Sbjct: 483 IEEIVPNQYTYPSI---LKTCIRLGDLELGEQIHSQIIKTNFQL--NAYVCSVLIDMYAK 537
Query: 113 CGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSV 172
G+LD A + S W M GY++ +AL +R ML R + +
Sbjct: 538 LGKLDTAWDILIRFAGKDVVS-WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 173 ALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRN 232
A+ AC + + G+ IHAQ +D NAL+ Y CG + FE +
Sbjct: 597 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGD 656
Query: 233 VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIH 292
++WN L++GF G E L F M +EG+ + T + + ++ + GK++H
Sbjct: 657 NIAWNALVSGFQQSGNNEEALRVFVRMN-REGIDNNNFTFGSAVKAASETANMKQGKQVH 715
Query: 293 GQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIE 352
I K+G ++ + NAL+ MYAKCGSI +K F + +K+ SWN ++ YS +G
Sbjct: 716 AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGS 775
Query: 353 KAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ-DYGVQPSLEHYACL 411
+A+D FD+MI SN+RP+ +T V +LS CSH GL +G +F M +YG+ P EHY C+
Sbjct: 776 EALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCV 835
Query: 412 VDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNA 471
VD+L R+G L A + MP+K +W +LL++C + N+ + E AA L E+EP ++
Sbjct: 836 VDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDS 895
Query: 472 GNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSS 531
YV+LSN+YA + W+ R+ M +G+KK+ G SWI++K IH+F G + +
Sbjct: 896 ATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYV-GDQNHPLA 954
Query: 532 AEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMP 591
E + + L+ + GY+ + +L+++ E K + HSE+LA F L+ A +P
Sbjct: 955 DEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVP 1014
Query: 592 IRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
I + KNLRVC DCH+W+K VS+V+ R I++RD RFHHFE G CSC D+W
Sbjct: 1015 INVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 186/400 (46%), Gaps = 19/400 (4%)
Query: 34 NPTLKSLCKSGKLEEALRL---IESPNPTPYQDEDISQLLHLCISRK-SLEHGQKLHQHL 89
N +K L + E L + S N TP + S +L C + + +++H +
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTP-NEGTFSGVLEACRGGSVAFDVVEQIHARI 213
Query: 90 LHSKGR---VIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNR 146
L+ R V+ NP LI LYS G +D ARRVF D S WVAM G S+N
Sbjct: 214 LYQGLRDSTVVCNP-----LIDLYSRNGFVDLARRVF-DGLRLKDHSSWVAMISGLSKNE 267
Query: 147 LSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNN 206
EA+ ++ DM + P +AFS L AC + +G +H + K +D V N
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 207 ALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMG 266
AL+ Y G +F M QR+ V++NTLI G S G + ++ F+ M L +G+
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL-DGLE 386
Query: 267 FSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKV 326
TL +++ C+ L G+++H K G ++ + AL+++YAKC I
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 327 FDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLT 386
F E +++ WN ML Y + + + +F +M I P+ T+ S+L C G
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 387 SEGQKFFNLMQDYGVQPSLEHYAC--LVDILGRSGKLDEA 424
G++ + + Q L Y C L+D+ + GKLD A
Sbjct: 507 ELGEQIHSQIIKTNFQ--LNAYVCSVLIDMYAKLGKLDTA 544
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 226/504 (44%), Gaps = 27/504 (5%)
Query: 58 PTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLD 117
PTPY S +L C +SLE G++LH +L K + + + L++LY G L
Sbjct: 286 PTPYA---FSSVLSACKKIESLEIGEQLHGLVL--KLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 118 EARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKAC 177
A +F + + + + + G S+ ++A+ +++ M +EP + + + AC
Sbjct: 341 SAEHIFSNMSQRDAVT-YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 178 TDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWN 237
+ G G+ +HA K ++ + ALL Y +C L F NVV WN
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 238 TLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVK 297
++ + + + FR MQ++E + + T ++L C +L L G++IH QI+K
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY-TYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 298 SGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDL 357
+ + + + + L+DMYAK G + + KD+ SW TM+AGY+ +KA+
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 358 FDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGR 417
F +M+ IR D + + +S C+ EGQ+ G L LV + R
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSR 638
Query: 418 SGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAG----N 473
GK++E+ +A W +L++ + GN A R+F + N G N
Sbjct: 639 CGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGN----NEEALRVF-VRMNREGIDNNN 692
Query: 474 YVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAE 533
+ S + A A +K+ +++ A+ I K S ++ + + A S + +
Sbjct: 693 FTFGSAVKA-ASETANMKQGKQVHAV--ITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 534 YLKI-------WNALSNAIKDSGY 550
+L++ WNA+ NA G+
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGF 773
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 8/289 (2%)
Query: 161 RSVEPGNFAFSVALKACTDV-GDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSG 219
R + P + L+ C G GR +H+Q+ K +++ ++ L FY+ G
Sbjct: 78 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 137
Query: 220 DVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPIC 279
+VF+ MP+R + +WN +I + + + E F M + E + + T + VL C
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEAC 196
Query: 280 -AQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSW 338
A ++IH +I+ G + + N L+D+Y++ G + ++VFDG+ KD +SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 339 NTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD 398
M++G S N +AI LF +M I P F S+LS C G++ L+
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 399 YGVQPSLEHYAC--LVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLN 445
G S + Y C LV + G L A + NM + + +L+N
Sbjct: 317 LGF--SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLIN 362
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/578 (36%), Positives = 336/578 (58%), Gaps = 15/578 (2%)
Query: 67 SQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDE 126
S+L+ CIS +++ G + +HL + R + L + LI +Y L++A ++F
Sbjct: 65 SELIKCCISNRAVHEGNLICRHLYFNGHRPM--MFLVNVLINMYVKFNLLNDAHQLF--- 119
Query: 127 EEDPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSR 184
++ P +V W M YS+ ++ ++AL + ML +V P + +S L++C + D R
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 185 VGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFS 244
+ +H + K E+D V +AL+ + + G D L VF+ M + + WN++I GF+
Sbjct: 180 M---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 245 GQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADR 304
+ L+ F+ M+ + G TLT+VL C L L G + H IVK + D
Sbjct: 237 QNSRSDVALELFKRMK-RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ--DL 293
Query: 305 PLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRS 364
L NAL+DMY KCGS+ +VF+ M+ +D+ +W+TM++G + NG ++A+ LF+ M S
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 365 NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDE 423
+P+ IT V +L CSH+GL +G +F M+ YG+ P EHY C++D+LG++GKLD+
Sbjct: 354 GTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDD 413
Query: 424 ALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYAD 483
A+ + M + W +LL +CR+ N+ LAE AA+++ ++P +AG Y +LSNIYA+
Sbjct: 414 AVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYAN 473
Query: 484 AGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSN 543
+ W+ V+ +R M RGIKK+ GCSWI++ ++IH F+ G +S E K N L +
Sbjct: 474 SQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSH-PQIVEVSKKLNQLIH 532
Query: 544 AIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVD 603
+ GY+P T+ VL D+ E + HSE+LA F L+ IRI KNLR+C D
Sbjct: 533 RLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGD 592
Query: 604 CHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
CH + K S++ R IV+RD R+HHF++G CSC D+W
Sbjct: 593 CHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 24/201 (11%)
Query: 255 AFRAMQLKEGMGFSWI---TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALM 311
A +AM + G W T + ++ C A+H G I + +G + L+N L+
Sbjct: 45 AMKAMDSLQSHGL-WADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 312 DMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGI 371
+MY K + ++FD M +++ SW TM++ YS +KA++L M+R N+RP+
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 372 TFVSLLSGCS--------HSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDE 423
T+ S+L C+ H G+ EG L D V+ + L+D+ + G+ ++
Sbjct: 164 TYSSVLRSCNGMSDVRMLHCGIIKEG-----LESDVFVRSA------LIDVFAKLGEPED 212
Query: 424 ALTVARNMPMKLSGSIWGSLL 444
AL+V M + +W S++
Sbjct: 213 ALSVFDEM-VTGDAIVWNSII 232
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/616 (35%), Positives = 332/616 (53%), Gaps = 17/616 (2%)
Query: 34 NPTLKSLCKSGKLEEALRL----IESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHL 89
N + S G+ +AL L I S Y + L C + E G+ LH +
Sbjct: 331 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT--FTSALAACFTPDFFEKGRILHGLV 388
Query: 90 LHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRL 147
+ S + N + + L+++Y G + E+RRV + P V W A+ GY+ +
Sbjct: 389 VVSG--LFYNQIIGNALVSMYGKIGEMSESRRVLL---QMPRRDVVAWNALIGGYAEDED 443
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS-RVGRAIHAQLAKRDEEADQVVNN 206
+AL ++ M V L AC GD G+ +HA + E+D+ V N
Sbjct: 444 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 503
Query: 207 ALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMG 266
+L+ Y +CG +F + RN+++WN ++A + G E L M+ G+
Sbjct: 504 SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVS 562
Query: 267 FSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKV 326
+ + L A+L L G+++HG VK G + D + NA DMY+KCG IG K+
Sbjct: 563 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 622
Query: 327 FDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLT 386
++ L SWN +++ +G E+ F EM+ I+P +TFVSLL+ CSH GL
Sbjct: 623 LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLV 682
Query: 387 SEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLN 445
+G +++++ +D+G++P++EH C++D+LGRSG+L EA T MPMK + +W SLL
Sbjct: 683 DKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 742
Query: 446 SCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
SC++ GN+ AAE L ++EP + YV+ SN++A G WE V+ VR+ M + IKK
Sbjct: 743 SCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKK 802
Query: 506 AGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEM 565
CSW+++K ++ +F G + ++ Y K+ + + IK+SGY+ +T L D +EE
Sbjct: 803 QACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLED-IKKLIKESGYVADTSQALQDTDEEQ 861
Query: 566 KVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTN 625
K + HSERLA +AL+ T G +RI KNLR+C DCHS K VSRV R IVLRD
Sbjct: 862 KEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQY 921
Query: 626 RFHHFENGTCSCMDHW 641
RFHHFE G CSC D+W
Sbjct: 922 RFHHFERGLCSCKDYW 937
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 170/344 (49%), Gaps = 4/344 (1%)
Query: 109 LYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNF 168
+Y+ GR+ AR +F D E W M G R L E + +R M ++P +F
Sbjct: 1 MYTKFGRVKPARHLF-DIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSF 59
Query: 169 AFSVALKACTDVGDS-RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEV 227
+ + AC G R G +H +AK +D V+ A+L Y G +VFE
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 228 MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHS 287
MP RNVVSW +L+ G+S +G+ E +D ++ M+ EG+G + +++ V+ C L
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR-GEGVGCNENSMSLVISSCGLLKDESL 178
Query: 288 GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSI 347
G++I GQ+VKSG ++ + N+L+ M G++ Y +FD M +D SWN++ A Y+
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 348 NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEH 407
NG IE++ +F M R + + T +LLS H G+ L+ G +
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 408 YACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG 451
L+ + +G+ EA V + MP K S W SL+ S DG
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSLMASFVNDG 341
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 175/371 (47%), Gaps = 7/371 (1%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
I+ L+ C R + + H +K ++ + + + ++ LY V G + +R+VF
Sbjct: 61 IASLVTAC-GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF-- 117
Query: 126 EEEDPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS 183
EE P +V W ++ +GYS +E + +Y+ M V + S+ + +C + D
Sbjct: 118 -EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 176
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
+GR I Q+ K E+ V N+L+ G +F+ M +R+ +SWN++ A +
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKAD 303
+ G + E+ F M+ S T++T+L + + G+ IHG +VK G +
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNS-TTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 295
Query: 304 RPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR 363
+ N L+ MYA G VF M +KDL SWN+++A + +G+ A+ L MI
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 364 SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDE 423
S + +TF S L+ C +G+ L+ G+ + LV + G+ G++ E
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 424 ALTVARNMPMK 434
+ V MP +
Sbjct: 416 SRRVLLQMPRR 426
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/529 (37%), Positives = 313/529 (59%), Gaps = 5/529 (0%)
Query: 116 LDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDM-LARSVEPGNFAFSVAL 174
+ A +VF E+ +W + GY+ S A +YR+M ++ VEP + +
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 175 KACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVV 234
KA T + D R+G IH+ + + + V N+LL Y CG +VF+ MP++++V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 235 SWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQ 294
+WN++I GF+ GK E L + M K G+ T+ ++L CA++ AL GK +H
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSK-GIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 295 IVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKA 354
++K G + N L+D+YA+CG + K +FD M K+ SW +++ G ++NG ++A
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 355 IDLFDEMIRSN-IRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLV 412
I+LF M + + P ITFV +L CSH G+ EG ++F M ++Y ++P +EH+ C+V
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 413 DILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAG 472
D+L R+G++ +A ++MPM+ + IW +LL +C + G+ LAE A ++ ++EPN++G
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 473 NYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSA 532
+YV+LSN+YA W V+++R+ M G+KK G S +++ R+H F+ G S +S A
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDA 487
Query: 533 EYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPI 592
Y K+ ++ ++ GY+P V D+ EE K V HSE++A F LI T PI
Sbjct: 488 IYAKL-KEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPI 546
Query: 593 RITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+ KNLRVC DCH +K VS+V R IV+RD +RFHHF+NG+CSC D+W
Sbjct: 547 TVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 134/274 (48%), Gaps = 13/274 (4%)
Query: 82 GQKLHQHLLHSK-GRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAI 140
G+ +H ++ S G +I +++ L+ LY+ CG + A +VF D+ + W ++
Sbjct: 140 GETIHSVVIRSGFGSLI---YVQNSLLHLYANCGDVASAYKVF-DKMPEKDLVAWNSVIN 195
Query: 141 GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEA 200
G++ N +EAL +Y +M ++ ++P F L AC +G +G+ +H + K
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255
Query: 201 DQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQ 260
+ +N LL Y CG + +F+ M +N VSW +LI G + G E ++ F+ M+
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 261 LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADR-PLLNALMDMYAKCGS 319
EG+ IT +L C+ + G E ++ + K R ++D+ A+ G
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 375
Query: 320 IGYCKKVFDGMES----KDLTSWNTMLAGYSING 349
+ KK ++ ++S ++ W T+L +++G
Sbjct: 376 V---KKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDE--DISQLLHLCISRKSLEHGQKLHQHLLH 91
N + ++GK EEAL L N + + I LL C +L G+++H +++
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI- 249
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
K + N + L+ LY+ CGR++EA+ +F DE D W ++ +G + N KEA
Sbjct: 250 -KVGLTRNLHSSNVLLDLYARCGRVEEAKTLF-DEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 152 LLVYRDMLA-RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN-NALL 209
+ +++ M + + P F L AC+ G + G ++ + + ++ + ++
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 210 RFYVECGCSGDVLRVFEVMP-QRNVVSWNTLIAGFSGQG 247
G + MP Q NVV W TL+ + G
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/586 (36%), Positives = 331/586 (56%), Gaps = 10/586 (1%)
Query: 59 TPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDE 118
TP + +S+LL S+ + +K+H +L + E +L ++L+ V G +
Sbjct: 6 TPLTKQMLSELLRASSSKP--KQLKKIHAIVLRTG--FSEKNSLLTQLLENLVVIGDMCY 61
Query: 119 ARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACT 178
AR+VF DE P +W + GY RN+L E+LL+Y+ M V P F + +KA +
Sbjct: 62 ARQVF-DEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAIS 120
Query: 179 DVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNT 238
+GD G A+HA + K +V L+ Y++ G +FE M +++V+WN
Sbjct: 121 QLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNA 180
Query: 239 LIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKS 298
+A G L+ F M + + F T+ ++L C QL +L G+EI+ + K
Sbjct: 181 FLAVCVQTGNSAIALEYFNKM-CADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE 239
Query: 299 GKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLF 358
+ + NA +DM+ KCG+ + +F+ M+ +++ SW+TM+ GY++NG +A+ LF
Sbjct: 240 EIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLF 299
Query: 359 DEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM---QDYGVQPSLEHYACLVDIL 415
M +RP+ +TF+ +LS CSH+GL +EG+++F+LM D ++P EHYAC+VD+L
Sbjct: 300 TTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLL 359
Query: 416 GRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYV 475
GRSG L+EA + MP++ IWG+LL +C + ++ L + A+ L E P+ +V
Sbjct: 360 GRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHV 419
Query: 476 MLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYL 535
+LSNIYA AG W+ V +VR M G KK A S ++ + +IH F G S +S A Y
Sbjct: 420 LLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYE 479
Query: 536 KIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRIT 595
K+ + + I+ GY+P+T V HD+ E K + HSE+LA F LI G PIR+
Sbjct: 480 KL-DEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVM 538
Query: 596 KNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
KNLR C DCH++ K VS +T I++RD NRFHHF NG CSC + W
Sbjct: 539 KNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/616 (34%), Positives = 337/616 (54%), Gaps = 15/616 (2%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDI--SQLLHLCISRKSLEHGQKLHQHLL 90
N + K G E++ L + +Q D S +L + GQ+LH L
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA--L 275
Query: 91 HSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAI---GYSRNRL 147
+ ++ ++++ YS R+ E R +F ++ PE +V+ + YS+
Sbjct: 276 SVTTGFSRDASVGNQILDFYSKHDRVLETRMLF----DEMPELDFVSYNVVISSYSQADQ 331
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNA 207
+ +L +R+M + NF F+ L ++ ++GR +H Q ++ V N+
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS 391
Query: 208 LLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
L+ Y +C + +F+ +PQR VSW LI+G+ +G L F M+ +
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR-GSNLRA 450
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF 327
T TVL A +L GK++H I++SG + + L+DMYAKCGSI +VF
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
+ M ++ SWN +++ ++ NG E AI F +MI S ++PD ++ + +L+ CSH G
Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570
Query: 388 EGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
+G ++F M YG+ P +HYAC++D+LGR+G+ EA + MP + +W S+LN+
Sbjct: 571 QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Query: 447 CRLDGNVSLAETAAERLFEIEP-NNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
CR+ N SLAE AAE+LF +E +A YV +SNIYA AG WE V+ V++ M RGIKK
Sbjct: 631 CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKV 690
Query: 506 AGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEM 565
SW+++ +IH F + + + E ++ N L+ I+ GY P+T V+ D++E+M
Sbjct: 691 PAYSWVEVNHKIHVFSSNDQTH-PNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQM 749
Query: 566 KVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTN 625
K+ + HSERLA FALI T G PI + KNLR C DCH+ +K +S++ +R I +RDT+
Sbjct: 750 KIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTS 809
Query: 626 RFHHFENGTCSCMDHW 641
RFHHF G CSC D+W
Sbjct: 810 RFHHFSEGVCSCGDYW 825
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 198/422 (46%), Gaps = 20/422 (4%)
Query: 99 NPTLKSKLITLYSVCG--RLDEARRVFQDEEEDPPES---VWVAMAIGYSRNRLSKEALL 153
NP L + L S C RLD A +F E+ PE + + GY ++ L E++
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLF----EEIPEKDSVTFNTLITGYEKDGLYTESIH 236
Query: 154 VYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYV 213
++ M +P +F FS LKA + D +G+ +HA D V N +L FY
Sbjct: 237 LFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYS 296
Query: 214 ECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSW--IT 271
+ + +F+ MP+ + VS+N +I+ +S + +L FR MQ MGF
Sbjct: 297 KHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC---MGFDRRNFP 353
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME 331
T+L I A L++L G+++H Q + + + + N+L+DMYAKC + +F +
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
+ SW +++GY G + LF +M SN+R D TF ++L + G++
Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQ 473
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG 451
+ G ++ + LVD+ + G + +A+ V MP + + S W +L+++ +G
Sbjct: 474 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAHADNG 532
Query: 452 NVSLAETAAERLFE--IEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGI---KKDA 506
+ A A ++ E ++P++ +L+ + +G + + M I GI KK
Sbjct: 533 DGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY 592
Query: 507 GC 508
C
Sbjct: 593 AC 594
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 113/281 (40%), Gaps = 36/281 (12%)
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQ 246
R + A++ K + D +N ++ + G +V++ MP +N VS NT+I+G
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 247 GKVFETLDAFRAMQLKEGMGFS----W----------------------------ITLTT 274
G V D F AM + + ++ W +T TT
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLL---NALMDMYAKCGSIGYCKKVFDGME 331
+LP C ++ ++H VK G + P L N L+ Y + + +F+ +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTN-PFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
KD ++NT++ GY +G ++I LF +M +S +P TF +L + GQ+
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMP 432
L G ++D + ++ E + MP
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/589 (36%), Positives = 319/589 (54%), Gaps = 44/589 (7%)
Query: 86 HQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRN 145
H LLH + P L KL Y+ G++ + +F + DP ++ A S N
Sbjct: 55 HNLLLHPR-----YPVLNLKLHRAYASHGKIRHSLALFH-QTIDPDLFLFTAAINTASIN 108
Query: 146 RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN 205
L +A L+Y +L+ + P F FS LK+C+ ++ G+ IH + K D V
Sbjct: 109 GLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVA 164
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQR-------------------------------NVV 234
L+ Y + G +VF+ MP+R ++V
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 235 SWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQ 294
SWN +I G++ G + L F+ + + IT+ L C+Q+ AL +G+ IH
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 295 IVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKA 354
+ S + + + L+DMY+KCGS+ VF+ KD+ +WN M+AGY+++G + A
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDA 344
Query: 355 IDLFDEMIR-SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLV 412
+ LF+EM + ++P ITF+ L C+H+GL +EG + F M Q+YG++P +EHY CLV
Sbjct: 345 LRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLV 404
Query: 413 DILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAG 472
+LGR+G+L A +NM M +W S+L SC+L G+ L + AE L + N+G
Sbjct: 405 SLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSG 464
Query: 473 NYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSA 532
YV+LSNIYA G +EGV +VR +M +GI K+ G S I+I+ ++H F A G + S
Sbjct: 465 IYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRA-GDREHSKSK 523
Query: 533 EYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPI 592
E + +S IK GY+PNT+ VL D+ E K + HSERLA + LI T G P+
Sbjct: 524 EIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPL 583
Query: 593 RITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+I KNLRVC DCH+ K +S++T R IV+RD NRFHHF +G+CSC D W
Sbjct: 584 KIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 343/623 (55%), Gaps = 39/623 (6%)
Query: 50 LRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITL 109
R++ TP + ++ C + LE G+K++ + +S V N + S L+ +
Sbjct: 224 FRMVRDEEVTP-NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV--NDLMVSALVDM 280
Query: 110 YSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFA 169
Y C +D A+R+F DE + AMA Y R L++EAL V+ M+ V P +
Sbjct: 281 YMKCNAIDVAKRLF-DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 170 FSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVF---- 225
A+ +C+ + + G++ H + + E+ + NAL+ Y++C R+F
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 226 ---------------------------EVMPQRNVVSWNTLIAGFSGQGKVF-ETLDAFR 257
E MP++N+VSWNT+I+G QG +F E ++ F
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV-QGSLFEEAIEVFC 458
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
+MQ +EG+ +T+ ++ C L AL K I+ I K+G + D L L+DM+++C
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
G +F+ + ++D+++W + ++ G E+AI+LFD+MI ++PDG+ FV L
Sbjct: 519 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGAL 578
Query: 378 SGCSHSGLTSEGQK-FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLS 436
+ CSH GL +G++ F+++++ +GV P HY C+VD+LGR+G L+EA+ + +MPM+ +
Sbjct: 579 TACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPN 638
Query: 437 GSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREM 496
IW SLL +CR+ GNV +A AAE++ + P G+YV+LSN+YA AG W + +VR
Sbjct: 639 DVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLS 698
Query: 497 MAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDV 556
M +G++K G S IQI+ + H F +G S + + +S G++P+
Sbjct: 699 MKEKGLRKPPGTSSIQIRGKTHEFTSGDES-HPEMPNIEAMLDEVSQRASHLGHVPDLSN 757
Query: 557 VLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTR 616
VL D++E+ K+ + HSE+LA + LI + G IRI KNLRVC DCHS+ K S+V
Sbjct: 758 VLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYN 817
Query: 617 RLIVLRDTNRFHHFENGTCSCMD 639
R I+LRD NRFH+ G CSC D
Sbjct: 818 REIILRDNNRFHYIRQGKCSCGD 840
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 186/393 (47%), Gaps = 7/393 (1%)
Query: 116 LDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALK 175
L A+ VF++ E ++ ++ GY+ + L EA+L++ M+ + P + F L
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 176 ACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVS 235
AC G IH + K D V N+L+ FY ECG +VF+ M +RNVVS
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 236 WNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI 295
W ++I G++ + + +D F M E + + +T+ V+ CA+L L +G++++ I
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 296 VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAI 355
SG + + +++AL+DMY KC +I K++FD + +L N M + Y G +A+
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 356 DLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDIL 415
+F+ M+ S +RPD I+ +S +S CS G+ + G + L+D+
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMY 382
Query: 416 GRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEP--NNAGN 473
+ + D A + M K + W S++ +G V AA FE P N
Sbjct: 383 MKCHRQDTAFRIFDRMSNK-TVVTWNSIVAGYVENGEVD----AAWETFETMPEKNIVSW 437
Query: 474 YVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
++S + + E ++ M + G+ D
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 191/427 (44%), Gaps = 35/427 (8%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSK 93
N ++ SG EA+ L + + + L KS G + H L K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 94 GRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL- 152
++ +++ L+ Y+ CG LD AR+VF DE + W +M GY+R +K+A+
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVF-DEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 153 LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFY 212
L +R + V P + + AC + D G ++A + E + ++ +AL+ Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 213 VECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
++C R+F+ N+ N + + + QG E L F M + G+ I++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM-MDSGVRPDRISM 340
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES 332
+ + C+QL + GK HG ++++G ++ + NAL+DMY KC ++FD M +
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 333 KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI-------------------------- 366
K + +WN+++AGY NG+++ A + F+ M NI
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 367 ------RPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGK 420
DG+T +S+ S C H G + + ++ G+Q + LVD+ R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 421 LDEALTV 427
+ A+++
Sbjct: 521 PESAMSI 527
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/592 (34%), Positives = 331/592 (55%), Gaps = 43/592 (7%)
Query: 89 LLHSKGRVIENPTLK-----SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYS 143
LLHS +V + K + ++T Y G D + + +++ + AM GY
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 144 RNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQV 203
+EAL + R M++ +E F + ++AC G ++G+ +HA + +R++ +
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF 322
Query: 204 VNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE 263
+N+L+ Y +CG + +FE MP +++VSWN L++G+ G + E F+ M KE
Sbjct: 323 -DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM--KE 379
Query: 264 GMGFSWITLTT--------------------------------VLPICAQLTALHSGKEI 291
SW+ + + + CA L A +G++
Sbjct: 380 KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQI 351
H Q++K G + NAL+ MYAKCG + ++VF M D SWN ++A +G
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHG 499
Query: 352 EKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYAC 410
+A+D+++EM++ IRPD IT +++L+ CSH+GL +G+K+F+ M+ Y + P +HYA
Sbjct: 500 AEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR 559
Query: 411 LVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNN 470
L+D+L RSGK +A +V ++P K + IW +LL+ CR+ GN+ L AA++LF + P +
Sbjct: 560 LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEH 619
Query: 471 AGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRS 530
G Y++LSN++A G WE V RVR++M RG+KK+ CSWI+++ ++HTF+ +S +
Sbjct: 620 DGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEA 679
Query: 531 SAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEE-MKVMWVCGHSERLAAVFALIHTGAG 589
A Y+ + + L ++ GY+P+T VLHD+ + K + HSE++A F L+ G
Sbjct: 680 EAVYIYLQD-LGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPG 738
Query: 590 MPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
IRI KNLR C DCH++ + +S V +R I+LRD RFHHF NG CSC + W
Sbjct: 739 TTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 186/441 (42%), Gaps = 80/441 (18%)
Query: 103 KSKLITLYSVCGRLDEARRVFQDEEEDPPESV-WVAMAIGYSRNRLSKEALLVYRDMLAR 161
++ +++ Y G + AR VF+ ++V + AM G+S N A+ ++ M
Sbjct: 83 RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 162 SVEPGNFAFSVALKACTDVG-DSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
+P NF F+ L V D + HA K V+NAL+ Y +C S
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 221 VL----RVFEVMPQRNVVSWNTLIAGFSGQG------KVFETLD------AFRAM----- 259
+L +VF+ + +++ SW T++ G+ G ++ E +D A+ AM
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 260 --------------QLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
+ G+ T +V+ CA L GK++H +++ +
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFH 321
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
N+L+ +Y KCG + +F+ M +KDL SWN +L+GY +G I +A +F EM N
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 366 IRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQP---------------------- 403
I ++++ ++SG + +G EG K F+ M+ G +P
Sbjct: 382 I----LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 404 -------------SLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD 450
SL L+ + + G ++EA V R MP L W +L+ +
Sbjct: 438 QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQH 496
Query: 451 GNVSLAETAAERLFE--IEPN 469
G+ + A E + + I P+
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPD 517
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 147/374 (39%), Gaps = 85/374 (22%)
Query: 276 LPICAQL--TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK 333
L +C L T+L + +HG I+ G + +LN L+D+Y K + Y +++FD +
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 334 DLTSWNTMLAGYSINGQI-------EK--------------------------AIDLFDE 360
D + TM++GY +G I EK AI+LF +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 361 MIRSNIRPDGITFVSLLSGCSHSGLTSEGQK----FFNLMQDYGVQPSLEHYACLVDILG 416
M +PD TF S+L+G + L ++ +K F G LV +
Sbjct: 139 MKHEGFKPDNFTFASVLAGLA---LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYS 195
Query: 417 RSGKLDEALTVARNM---PMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGN 473
+ L AR + ++ W +++ +G L E E + + A N
Sbjct: 196 KCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255
Query: 474 YVMLSNIYADAGMW-EGVKRVREMMAIRGIKKD-----------AGCSWIQIKQRIHTFV 521
M+S Y + G + E ++ VR M++ GI+ D A +Q+ +++H +V
Sbjct: 256 -AMISG-YVNRGFYQEALEMVRRMVS-SGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 522 --------------------AGGSSDFRS-----SAEYLKIWNALSNAIKDSGYIPNTDV 556
G + R+ A+ L WNAL + SG+I +
Sbjct: 313 LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 557 VLHDINEEMKVMWV 570
+ ++ E+ + W+
Sbjct: 373 IFKEMKEKNILSWM 386
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/576 (35%), Positives = 341/576 (59%), Gaps = 5/576 (0%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
I LL +S G +LH +++ S +I P + + LI YS ++RR F+D
Sbjct: 18 ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLI--PLVANNLINFYSKSQLPFDSRRAFED 75
Query: 126 EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV 185
+ + ++ +++N L +L + M+A ++ P + A K+C + +
Sbjct: 76 SPQKSSTTWSSIISC-FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDI 134
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
GR++H K +AD V ++L+ Y +CG ++F+ MPQRNVV+W+ ++ G++
Sbjct: 135 GRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQ 194
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
G+ E L F+ L E + + + ++V+ +CA T L G++IHG +KS +
Sbjct: 195 MGENEEALWLFKE-ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSF 253
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
+ ++L+ +Y+KCG +VF+ + K+L WN ML Y+ + +K I+LF M S
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Query: 366 IRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEAL 425
++P+ ITF+++L+ CSH+GL EG+ +F+ M++ ++P+ +HYA LVD+LGR+G+L EAL
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEAL 373
Query: 426 TVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAG 485
V NMP+ + S+WG+LL SC + N LA AA+++FE+ P ++G ++ LSN YA G
Sbjct: 374 EVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADG 433
Query: 486 MWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAI 545
+E + R+++ RG KK+ G SW++ + ++HTF AG +S Y K+ L +
Sbjct: 434 RFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKL-AELGEEM 492
Query: 546 KDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCH 605
+ +GYI +T VL +++ + K + HSERLA F LI A PIR+ KNLRVC DCH
Sbjct: 493 EKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCH 552
Query: 606 SWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+ +K +S TRR+I++RD NRFH FE+G CSC D+W
Sbjct: 553 NAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/566 (35%), Positives = 329/566 (58%), Gaps = 9/566 (1%)
Query: 77 KSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWV 136
+ L G ++H L +K + + + I+LYS CG++ +F+ E P +
Sbjct: 235 QELRLGMQIHS--LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR-EFRKPDIVAYN 291
Query: 137 AMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKR 196
AM GY+ N ++ +L ++++++ + S + G + AIH K
Sbjct: 292 AMIHGYTSNGETELSLSLFKELM---LSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKS 348
Query: 197 DEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAF 256
+ + V+ AL Y + ++F+ P++++ SWN +I+G++ G + + F
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 257 RAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAK 316
R MQ K + +T+T +L CAQL AL GK +H + + ++ + AL+ MYAK
Sbjct: 409 REMQ-KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAK 467
Query: 317 CGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
CGSI +++FD M K+ +WNTM++GY ++GQ ++A+++F EM+ S I P +TF+ +
Sbjct: 468 CGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCV 527
Query: 377 LSGCSHSGLTSEGQKFFN-LMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKL 435
L CSH+GL EG + FN ++ YG +PS++HYAC+VDILGR+G L AL M ++
Sbjct: 528 LYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEP 587
Query: 436 SGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVRE 495
S+W +LL +CR+ + +LA T +E+LFE++P+N G +V+LSNI++ + VR+
Sbjct: 588 GSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQ 647
Query: 496 MMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTD 555
R + K G + I+I + H F +G S + Y K+ L ++++GY P T+
Sbjct: 648 TAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKL-EKLEGKMREAGYQPETE 706
Query: 556 VVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVT 615
+ LHD+ EE + + V HSERLA F LI T G IRI KNLRVC+DCH+ K +S++T
Sbjct: 707 LALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKIT 766
Query: 616 RRLIVLRDTNRFHHFENGTCSCMDHW 641
R+IV+RD NRFHHF++G CSC D+W
Sbjct: 767 ERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 146/301 (48%), Gaps = 7/301 (2%)
Query: 88 HLLHSKGRVI-----ENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGY 142
HL + ++I + +L +KL S G + AR +F + P ++ + G+
Sbjct: 35 HLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQR-PDVFLFNVLMRGF 93
Query: 143 SRNRLSKEALLVYRDMLARS-VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
S N +L V+ + + ++P + ++ A+ A + D R GR IH Q +++
Sbjct: 94 SVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
++ + +++ Y + D +VF+ MP+++ + WNT+I+G+ E++ FR +
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
+ TL +LP A+L L G +IH K+G + +L + +Y+KCG I
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIK 273
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
+F D+ ++N M+ GY+ NG+ E ++ LF E++ S R T VSL+
Sbjct: 274 MGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG 333
Query: 382 H 382
H
Sbjct: 334 H 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 85/185 (45%), Gaps = 12/185 (6%)
Query: 270 ITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDG 329
I+ T L + T++ + H QI+ G + D LL L + G+I Y + +F
Sbjct: 18 ISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLS 77
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRS-NIRPDGITFVSLLSGCS-----HS 383
++ D+ +N ++ G+S+N ++ +F + +S +++P+ T+ +S S +
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 384 GLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSL 443
G GQ + G L + +V + + ++++A V MP K +W ++
Sbjct: 138 GRVIHGQAVVD-----GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK-DTILWNTM 191
Query: 444 LNSCR 448
++ R
Sbjct: 192 ISGYR 196
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/539 (36%), Positives = 310/539 (57%), Gaps = 31/539 (5%)
Query: 114 GRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVA 173
GR+DEAR +F DE + W M GY +N + V R + E +++
Sbjct: 186 GRVDEARLIF-DEMRERNVVTWTTMITGYRQN----NRVDVARKLFEVMPEKTEVSWTSM 240
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQ----------VVNNALLRFYVECGCSGDVLR 223
L T L+ R E+A++ + NA++ + E G R
Sbjct: 241 LLGYT--------------LSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARR 286
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLT 283
VF++M R+ +W +I + +G E LD F MQ K+G+ S+ +L ++L +CA L
Sbjct: 287 VFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ-KQGVRPSFPSLISILSVCATLA 345
Query: 284 ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLA 343
+L G+++H +V+ D + + LM MY KCG + K VFD SKD+ WN++++
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIIS 405
Query: 344 GYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQ 402
GY+ +G E+A+ +F EM S P+ +T +++L+ CS++G EG + F M+ + V
Sbjct: 406 GYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVT 465
Query: 403 PSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAER 462
P++EHY+C VD+LGR+G++D+A+ + +M +K ++WG+LL +C+ + LAE AA++
Sbjct: 466 PTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKK 525
Query: 463 LFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVA 522
LFE EP+NAG YV+LS+I A W V VR+ M + K GCSWI++ +++H F
Sbjct: 526 LFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTR 585
Query: 523 GGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFA 582
GG + A L + ++++GY P+ VLHD++EE KV + HSERLA +
Sbjct: 586 GGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYG 645
Query: 583 LIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
L+ G+PIR+ KNLRVC DCH+ +K +S+VT R I+LRD NRFHHF NG CSC D+W
Sbjct: 646 LLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 140/330 (42%), Gaps = 75/330 (22%)
Query: 107 ITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPG 166
I+ S G+++EAR+ F D + W ++ GY N L KEA ++ +M R+V
Sbjct: 24 ISRLSRIGKINEARKFF-DSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV--- 79
Query: 167 NFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFE 226
V N L+ Y++ + VFE
Sbjct: 80 ------------------------------------VSWNGLVSGYIKNRMIVEARNVFE 103
Query: 227 VMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALH 286
+MP+RNVVSW ++ G+ +G V E F ++ E SW T +
Sbjct: 104 LMPERNVVSWTAMVKGYMQEGMVGEAESLF--WRMPERNEVSW-------------TVMF 148
Query: 287 SGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI-GYCKK--------VFDGMESKDLTS 337
G G+I K+ K D + + D+ A I G C++ +FD M +++ +
Sbjct: 149 GGLIDDGRIDKARKLYD---MMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVT 205
Query: 338 WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ 397
W TM+ GY N +++ A LF+ M +++ S+L G + SG + ++FF +M
Sbjct: 206 WTTMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAEEFFEVMP 261
Query: 398 DYGVQPSLEHYACLVDILGRSGKLDEALTV 427
++P + A +V G G++ +A V
Sbjct: 262 ---MKPVIACNAMIVG-FGEVGEISKARRV 287
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 19/157 (12%)
Query: 315 AKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFV 374
++ G I +K FD ++ K + SWN++++GY NG ++A LFDEM N+ +++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV----VSWN 83
Query: 375 SLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
L+SG + + E + F LM + V + +V + G + EA ++ MP +
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVS----WTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 435 LSGS---IWGSLLNSCRLDGNVSLAETAAERLFEIEP 468
S ++G L++ R+D A +L+++ P
Sbjct: 140 NEVSWTVMFGGLIDDGRID--------KARKLYDMMP 168
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
+L +C + SL++G+++H HL+ + + ++ + S L+T+Y CG L +A+ VF D
Sbjct: 337 ILSVCATLASLQYGRQVHAHLV--RCQFDDDVYVASVLMTMYVKCGELVKAKLVF-DRFS 393
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRA 188
+W ++ GY+ + L +EAL ++ +M + P L AC+ G G
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLE 453
Query: 189 IHAQLAKR 196
I + +
Sbjct: 454 IFESMESK 461
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 308 NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIR 367
N+++ Y G +++FD M +++ SWN +++GY N I +A ++F+ M N+
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV- 110
Query: 368 PDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTV 427
+++ +++ G G+ E + F M + + L+D G++D+A +
Sbjct: 111 ---VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID----DGRIDKARKL 163
Query: 428 ARNMPMK---LSGSIWGSLLNSCRLD 450
MP+K S ++ G L R+D
Sbjct: 164 YDMMPVKDVVASTNMIGGLCREGRVD 189
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/551 (37%), Positives = 313/551 (56%), Gaps = 6/551 (1%)
Query: 94 GRVIENPTLKSK-LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL 152
GR+ + + S LI Y G L AR+VF DE D + W AM G + ++E L
Sbjct: 18 GRMRKKNYMSSNILINGYVRAGDLVNARKVF-DEMPDRKLTTWNAMIAGLIQFEFNEEGL 76
Query: 153 LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFY 212
++R+M P + + +G+ IH K E D VVN++L Y
Sbjct: 77 SLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMY 136
Query: 213 VECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
+ G D V MP RN+V+WNTLI G + G L ++ M++ G + IT
Sbjct: 137 MRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKI-SGCRPNKITF 195
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES 332
TVL C+ L G++IH + +K G + ++++L+ MY+KCG +G K F E
Sbjct: 196 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED 255
Query: 333 KDLTSWNTMLAGYSINGQIEKAIDLFDEMI-RSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
+D W++M++ Y +GQ ++AI+LF+ M ++N+ + + F++LL CSHSGL +G +
Sbjct: 256 EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLE 315
Query: 392 FFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD 450
F++M + YG +P L+HY C+VD+LGR+G LD+A + R+MP+K IW +LL++C +
Sbjct: 316 LFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIH 375
Query: 451 GNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSW 510
N +A+ + + +I+PN++ YV+L+N++A A W V VR+ M + +KK+AG SW
Sbjct: 376 KNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISW 435
Query: 511 IQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWV 570
+ K +H F G S +S Y + L+ +K GY P+T VLHD++EE K +
Sbjct: 436 FEHKGEVHQFKMGDRSQSKSKEIYSYL-KELTLEMKLKGYKPDTASVLHDMDEEEKESDL 494
Query: 571 CGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHF 630
HSE+LA FAL+ G PIRI KNLRVC DCH K +S + R I LRD +RFHHF
Sbjct: 495 VQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHF 554
Query: 631 ENGTCSCMDHW 641
NG CSC D+W
Sbjct: 555 INGKCSCGDYW 565
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 9/249 (3%)
Query: 178 TDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWN 237
+ +GD A++ ++ K++ + +N L+ YV G + +VF+ MP R + +WN
Sbjct: 5 SKLGDFPSAVAVYGRMRKKN----YMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 238 TLIAGFSGQGKVFETLDAFRAMQLKEGMGFS--WITLTTVLPICAQLTALHSGKEIHGQI 295
+IAG E L FR M G+GFS TL +V A L ++ G++IHG
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMH---GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYT 117
Query: 296 VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAI 355
+K G + D + ++L MY + G + + V M ++L +WNT++ G + NG E +
Sbjct: 118 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVL 177
Query: 356 DLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDIL 415
L+ M S RP+ ITFV++LS CS + +GQ+ G + + L+ +
Sbjct: 178 YLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMY 237
Query: 416 GRSGKLDEA 424
+ G L +A
Sbjct: 238 SKCGCLGDA 246
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/560 (34%), Positives = 318/560 (56%), Gaps = 37/560 (6%)
Query: 116 LDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLA--RSVEPGNFAFSVA 173
LD A ++ D E P +M + ++ + +++ YR +L+ ++P N+ +
Sbjct: 56 LDYANQIL-DRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFL 114
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGC---------------- 217
++ACT + G +H +R + D V L+ Y E GC
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 218 ------------SGDVL---RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLK 262
GDV+ ++FE MP+R+ ++WN +I+G++ G+ E L+ F MQL
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQL- 233
Query: 263 EGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGY 322
EG+ + + + +VL C QL AL G+ H I ++ K L L+D+YAKCG +
Sbjct: 234 EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 323 CKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSH 382
+VF GME K++ +W++ L G ++NG EK ++LF M + + P+ +TFVS+L GCS
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 383 SGLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWG 441
G EGQ+ F+ M+ ++G++P LEHY CLVD+ R+G+L++A+++ + MPMK ++W
Sbjct: 354 VGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWS 413
Query: 442 SLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRG 501
SLL++ R+ N+ L A++++ E+E N G YV+LSNIYAD+ W+ V VR+ M +G
Sbjct: 414 SLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKG 473
Query: 502 IKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDI 561
++K GCS +++ +H F G S + + + +W +S ++ +GY +T V+ DI
Sbjct: 474 VRKQPGCSVMEVNGEVHEFFVGDKSHPKYT-QIDAVWKDISRRLRLAGYKADTTPVMFDI 532
Query: 562 NEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVL 621
+EE K +C HSE+ A F ++ +PIRI KNLRVC DCH +S++ R I++
Sbjct: 533 DEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIV 592
Query: 622 RDTNRFHHFENGTCSCMDHW 641
RD NRFHHF++G CSC W
Sbjct: 593 RDRNRFHHFKDGHCSCNGFW 612
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 155/363 (42%), Gaps = 47/363 (12%)
Query: 33 LNPTLKSLCKSGKLEEAL----RLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQH 88
LN +++ CKS E++ R++ S N + ++ L+ C + E G ++H
Sbjct: 74 LNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGM 133
Query: 89 LLHSKGRVIEN-PTLKSKLITLYSVCGRLDEARRVFQD---------------------- 125
+ R +N P +++ LI+LY+ G LD +VF
Sbjct: 134 TIR---RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 126 ----------EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALK 175
E DP W AM GY++ S+EAL V+ M V+ A L
Sbjct: 191 VFARKLFEGMPERDPI--AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 176 ACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVS 235
ACT +G GR H+ + + + + L+ Y +CG + VF M ++NV +
Sbjct: 249 ACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 236 WNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI 295
W++ + G + G + L+ F M+ ++G+ + +T +VL C+ + + G+ H
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMK-QDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDS 366
Query: 296 VKS--GKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTS-WNTMLAGYSINGQIE 352
+++ G + L+D+YA+ G + + M K + W+++L + +E
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLE 426
Query: 353 KAI 355
+
Sbjct: 427 LGV 429
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/568 (36%), Positives = 318/568 (55%), Gaps = 11/568 (1%)
Query: 77 KSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWV 136
+ L +++H H + K + + + + LI YS + EA +F+ D W
Sbjct: 431 EGLSLSKQVHVHAI--KINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLV--AWN 486
Query: 137 AMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKR 196
AM GY+++ + L ++ M + +F + K C + G+ +HA K
Sbjct: 487 AMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS 546
Query: 197 DEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAF 256
+ D V++ +L YV+CG F+ +P + V+W T+I+G G+ F
Sbjct: 547 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 606
Query: 257 RAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAK 316
M+L G+ T+ T+ + LTAL G++IH +K D + +L+DMYAK
Sbjct: 607 SQMRLM-GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAK 665
Query: 317 CGSI--GYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFV 374
CGSI YC +F +E ++T+WN ML G + +G+ ++ + LF +M I+PD +TF+
Sbjct: 666 CGSIDDAYC--LFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 375 SLLSGCSHSGLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPM 433
+LS CSHSGL SE K M DYG++P +EHY+CL D LGR+G + +A + +M M
Sbjct: 724 GVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSM 783
Query: 434 KLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRV 493
+ S S++ +LL +CR+ G+ + A +L E+EP ++ YV+LSN+YA A W+ +K
Sbjct: 784 EASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLA 843
Query: 494 REMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPN 553
R MM +KKD G SWI++K +IH FV S+ ++ Y K+ + + + IK GY+P
Sbjct: 844 RTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRD-IKQEGYVPE 902
Query: 554 TDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSR 613
TD L D+ EE K + HSE+LA F L+ T PIR+ KNLRVC DCH+ MK +++
Sbjct: 903 TDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAK 962
Query: 614 VTRRLIVLRDTNRFHHFENGTCSCMDHW 641
V R IVLRD NRFH F++G CSC D+W
Sbjct: 963 VYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 6/205 (2%)
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNV 233
L+ D +G+ HA++ +E ++ + N L+ Y +CG RVF+ MP R++
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 234 VSWNTLIAGFSGQGK-VFETLDA----FRAMQLKEGMGFSWITLTTVLPICAQLTALHSG 288
VSWN+++A ++ + V E + FR ++ ++ + S +TL+ +L +C + +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILR-QDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 289 KEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSIN 348
+ HG K G D + AL+++Y K G + K +F+ M +D+ WN ML Y
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITF 373
G E+AIDL S + P+ IT
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 137/301 (45%), Gaps = 4/301 (1%)
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
L + DM+ VE F + L V +G+ +H K + V+N+L+
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
Y + G VF+ M +R+++SWN++IAG + G E + F + L+ G+ T
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL-LRCGLKPDQYT 418
Query: 272 LTTVLPICAQL-TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM 330
+T+VL + L L K++H +K +D + AL+D Y++ + + +F+
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-R 477
Query: 331 ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQ 390
+ DL +WN M+AGY+ + K + LF M + R D T ++ C ++G+
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 391 KFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD 450
+ G L + ++D+ + G + A ++P+ W ++++ C +
Sbjct: 538 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP-DDVAWTTMISGCIEN 596
Query: 451 G 451
G
Sbjct: 597 G 597
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 173/434 (39%), Gaps = 85/434 (19%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPT--LKSKLITLYSVCGRLDEARRVFQDE 126
L I+ L G+ H +L + ENP L + LI++YS CG L ARRVF D+
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFE----ENPERFLINNLISMYSKCGSLTYARRVF-DK 99
Query: 127 EEDPPESVWVAMAIGYSRNRLS-----KEALLVYRDMLARSVEPGNFAFSVALKACTDVG 181
D W ++ Y+++ ++A L++R + V S LK C G
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
Query: 182 DSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIA 241
+ H K + D+ V AL+ Y++ G + +FE MP R+VV WN ++
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 242 GFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPI------CAQLTA----------- 284
+ G E +D A G+ + ITL + I Q+ +
Sbjct: 220 AYLEMGFKEEAIDLSSAFH-SSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVS 278
Query: 285 ------------LHSGK-----EIHGQIVKSGKKADRPLLNALMDMYAKCGSIG------ 321
LHSG+ + +V+S + D+ ++ K S+
Sbjct: 279 EIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVH 338
Query: 322 ---------------------YCK--------KVFDGMESKDLTSWNTMLAGYSINGQIE 352
YCK VFD M +DL SWN+++AG + NG
Sbjct: 339 CMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEV 398
Query: 353 KAIDLFDEMIRSNIRPDGITFVSLLSGCSH--SGLTSEGQKFFNLMQDYGVQPSLEHYAC 410
+A+ LF +++R ++PD T S+L S GL+ Q + ++ V S A
Sbjct: 399 EAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTA- 457
Query: 411 LVDILGRSGKLDEA 424
L+D R+ + EA
Sbjct: 458 LIDAYSRNRCMKEA 471
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Query: 288 GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSI 347
GK H +I+ + +R L+N L+ MY+KCGS+ Y ++VFD M +DL SWN++LA Y+
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 348 NGQ-----IEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQ 402
+ + I++A LF + + + +T +L C HSG + F G+
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 403 PSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
LV+I + GK+ E + MP +
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR 209
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/481 (40%), Positives = 291/481 (60%), Gaps = 12/481 (2%)
Query: 168 FAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEV 227
F + L + GD R + + +D A V NA Y + G D ++F+
Sbjct: 98 FVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA----YAKAGLIDDARKLFDE 153
Query: 228 MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL-KEGMGF---SWITLTTVLPICAQLT 283
MP+RNV+SW+ LI G+ GK E LD FR MQL K F + T++TVL C +L
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 284 ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK-DLTSWNTML 342
AL GK +H I K + D L AL+DMYAKCGS+ K+VF+ + SK D+ +++ M+
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 343 AGYSINGQIEKAIDLFDEMIRS-NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYG 400
++ G ++ LF EM S NI P+ +TFV +L C H GL +EG+ +F +M +++G
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAA 460
+ PS++HY C+VD+ GRSG + EA + +MPM+ IWGSLL+ R+ G++ E A
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393
Query: 461 ERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTF 520
+RL E++P N+G YV+LSN+YA G W VK +R M ++GI K GCS+++++ +H F
Sbjct: 394 KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEF 453
Query: 521 VAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAV 580
V G S S Y + + + ++++GY+ +T VL D+NE+ K + + HSE+LA
Sbjct: 454 VVGDESQQESERIY-AMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIA 512
Query: 581 FALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDH 640
F L+ T G P+RI KNLR+C DCH MK +S++ R IV+RD NRFHHF +G+CSC D
Sbjct: 513 FCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDF 572
Query: 641 W 641
W
Sbjct: 573 W 573
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 36/193 (18%)
Query: 271 TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM 330
T +LP L G+ H QI+ G D + +L++MY+ CG + ++VFD
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 331 ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN------------------------- 365
SKDL +WN+++ Y+ G I+ A LFDEM N
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFR 183
Query: 366 -----------IRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDI 414
+RP+ T ++LS C G +G+ + Y V+ + L+D+
Sbjct: 184 EMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDM 243
Query: 415 LGRSGKLDEALTV 427
+ G L+ A V
Sbjct: 244 YAKCGSLERAKRV 256
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/599 (34%), Positives = 340/599 (56%), Gaps = 8/599 (1%)
Query: 46 LEEALRL-IESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKS 104
+EE++R+ +E+ + +S +L C + L + ++ ++L + G V+E+ T+++
Sbjct: 289 VEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GFVLES-TVRN 346
Query: 105 KLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVE 164
LI +Y+ CG + AR VF E S W ++ GY ++ EA+ +++ M+ +
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 165 PGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRV 224
+ + + + T + D + G+ +H+ K D V+NAL+ Y +CG GD L++
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 225 FEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTA 284
F M + V+WNT+I+ G L M+ E + T LP+CA L A
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVP-DMATFLVTLPMCASLAA 524
Query: 285 LHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAG 344
GKEIH +++ G +++ + NAL++MY+KCG + +VF+ M +D+ +W M+
Sbjct: 525 KRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYA 584
Query: 345 YSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQP 403
Y + G+ EKA++ F +M +S I PD + F++++ CSHSGL EG F M+ Y + P
Sbjct: 585 YGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 644
Query: 404 SLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERL 463
+EHYAC+VD+L RS K+ +A + MP+K SIW S+L +CR G++ AE + R+
Sbjct: 645 MIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRI 704
Query: 464 FEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAG 523
E+ P++ G ++ SN YA W+ V +R+ + + I K+ G SWI++ + +H F +G
Sbjct: 705 IELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSG 764
Query: 524 GSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDI-NEEMKVMWVCGHSERLAAVFA 582
S +S A Y K L + + GYIP+ V ++ EE K +CGHSERLA F
Sbjct: 765 DDSAPQSEAIY-KSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFG 823
Query: 583 LIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
L++T G P+++ KNLRVC DCH K +S++ R I++RD NRFH F++GTCSC D W
Sbjct: 824 LLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 22/386 (5%)
Query: 105 KLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVE 164
KLI YS + VF+ +W ++ +S+N L EAL Y + V
Sbjct: 44 KLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVS 103
Query: 165 PGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRV 224
P + F +KAC + D+ +G ++ Q+ E+D V NAL+ Y G +V
Sbjct: 104 PDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 225 FEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWI-----TLTTVLPIC 279
F+ MP R++VSWN+LI+G+S G E L+ + +LK SWI T+++VLP
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH--ELKN----SWIVPDSFTVSSVLPAF 217
Query: 280 AQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWN 339
L + G+ +HG +KSG + + N L+ MY K ++VFD M+ +D S+N
Sbjct: 218 GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYN 277
Query: 340 TMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDY 399
TM+ GY +E+++ +F E + +PD +T S+L C H S + +N M
Sbjct: 278 TMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA 336
Query: 400 GVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETA 459
G L+D+ + G + A V +M K + S W S+++ G++
Sbjct: 337 GFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS-WNSIISGYIQSGDL----ME 391
Query: 460 AERLFEI-----EPNNAGNYVMLSNI 480
A +LF++ E + Y+ML ++
Sbjct: 392 AMKLFKMMMIMEEQADHITYLMLISV 417
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 219/451 (48%), Gaps = 16/451 (3%)
Query: 34 NPTLKSLCKSGKLEEAL----RLIESP-NPTPYQDEDISQLLHLCISRKSLEHGQKLHQH 88
N +++ K+G EAL +L ES +P Y ++ C E G +++
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYT---FPSVIKACAGLFDAEMGDLVYEQ 131
Query: 89 LLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLS 148
+L + + + L+ +YS G L AR+VF DE W ++ GYS +
Sbjct: 132 ILDMGFE--SDLFVGNALVDMYSRMGLLTRARQVF-DEMPVRDLVSWNSLISGYSSHGYY 188
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
+EAL +Y ++ + P +F S L A ++ + G+ +H K + VVNN L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 209 LRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS 268
+ Y++ D RVF+ M R+ VS+NT+I G+ V E++ F ++ +
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPD 306
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFD 328
+T+++VL C L L K I+ ++K+G + + N L+D+YAKCG + + VF+
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSE 388
ME KD SWN++++GY +G + +A+ LF M+ + D IT++ L+S +
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 389 GQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCR 448
G+ + G+ L L+D+ + G++ ++L + +M + + W +++++C
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISACV 485
Query: 449 LDGNVS--LAETAAERLFEIEPNNAGNYVML 477
G+ + L T R E+ P+ A V L
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/575 (36%), Positives = 317/575 (55%), Gaps = 52/575 (9%)
Query: 116 LDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL---LVYRDMLARSVEPGNFAFSV 172
LD A ++F + S W + G+S + K + L Y M VEP F F
Sbjct: 75 LDYAHKIFNQMPQRNCFS-WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 173 ALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV----------- 221
LKAC G + G+ IH K D+ V + L+R YV CG D
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 222 -------------------------LRV---------FEVMPQRNVVSWNTLIAGFSGQG 247
+R+ F+ M QR+VVSWNT+I+G+S G
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 248 KVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL 307
+ ++ FR M+ K + +++TL +VLP ++L +L G+ +H SG + D L
Sbjct: 254 FFKDAVEVFREMK-KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 308 NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIR 367
+AL+DMY+KCG I VF+ + +++ +W+ M+ G++I+GQ AID F +M ++ +R
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 368 PDGITFVSLLSGCSHSGLTSEGQKFFNLMQDY-GVQPSLEHYACLVDILGRSGKLDEALT 426
P + +++LL+ CSH GL EG+++F+ M G++P +EHY C+VD+LGRSG LDEA
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 427 VARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGM 486
NMP+K IW +LL +CR+ GNV + + A L ++ P+++G YV LSN+YA G
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 492
Query: 487 WEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIK 546
W V +R M + I+KD GCS I I +H FV S ++ E + +S+ ++
Sbjct: 493 WSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAK-EINSMLVEISDKLR 551
Query: 547 DSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHS 606
+GY P T VL ++ EE K + HSE++A F LI T G PIRI KNLR+C DCHS
Sbjct: 552 LAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHS 611
Query: 607 WMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+K +S+V +R I +RD RFHHF++G+CSCMD+W
Sbjct: 612 SIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 128/293 (43%), Gaps = 35/293 (11%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP 165
+I Y G AR +F + S W M GYS N K+A+ V+R+M + P
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVS-WNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 166 GNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVF 225
L A + +G +G +H D V+ +AL+ Y +CG + VF
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 226 EVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTAL 285
E +P+ NV++W+ +I GF+ G+ + +D F M+ + G+ S + +L C+
Sbjct: 333 ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAYINLLTACS----- 386
Query: 286 HSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGY 345
HG +V+ G++ +++ DG+E + + + M+
Sbjct: 387 ------HGGLVEEGRRYFSQMVSV------------------DGLEPR-IEHYGCMVDLL 421
Query: 346 SINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD 398
+G +++A + M I+PD + + +LL C G G++ N++ D
Sbjct: 422 GRSGLLDEAEEFILNM---PIKPDDVIWKALLGACRMQGNVEMGKRVANILMD 471
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/515 (35%), Positives = 307/515 (59%), Gaps = 2/515 (0%)
Query: 128 EDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGR 187
+DP + M GY +EAL Y +M+ R EP NF + LKACT + R G+
Sbjct: 93 DDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGK 152
Query: 188 AIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQG 247
IH Q+ K EAD V N+L+ Y CG VFE + + SW+++++ +G G
Sbjct: 153 QIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMG 212
Query: 248 KVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL 307
E L FR M + + + + L CA AL+ G IHG ++++ + + +
Sbjct: 213 MWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQ 272
Query: 308 NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIR 367
+L+DMY KCG + +F ME ++ +++ M++G +++G+ E A+ +F +MI+ +
Sbjct: 273 TSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 332
Query: 368 PDGITFVSLLSGCSHSGLTSEGQKFF-NLMQDYGVQPSLEHYACLVDILGRSGKLDEALT 426
PD + +VS+L+ CSHSGL EG++ F ++++ V+P+ EHY CLVD+LGR+G L+EAL
Sbjct: 333 PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALE 392
Query: 427 VARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGM 486
+++P++ + IW + L+ CR+ N+ L + AA+ L ++ +N G+Y+++SN+Y+ M
Sbjct: 393 TIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQM 452
Query: 487 WEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIK 546
W+ V R R +AI+G+K+ G S +++K + H FV+ S + Y K+ + + +K
Sbjct: 453 WDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIY-KMLHQMEWQLK 511
Query: 547 DSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHS 606
GY P+ +L +++EE K + GHS+++A F L++T G I+I +NLR+C DCH+
Sbjct: 512 FEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHT 571
Query: 607 WMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+ K +S + R IV+RD NRFH F+ GTCSC D+W
Sbjct: 572 YTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 139/290 (47%), Gaps = 13/290 (4%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
LL C KS+ G+++H + K + + +++ LI +Y CG ++ + VF+ E
Sbjct: 138 LLKACTRLKSIREGKQIHGQVF--KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLES 195
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARS-VEPGNFAFSVALKACTDVGDSRVGR 187
S W +M + + E LL++R M + + ++ AL AC + G +G
Sbjct: 196 KTAAS-WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGM 254
Query: 188 AIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQG 247
+IH L + E + +V +L+ YV+CGC L +F+ M +RN ++++ +I+G + G
Sbjct: 255 SIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHG 314
Query: 248 KVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGK-KADRPL 306
+ L F M +KEG+ + +VL C+ + G+ + +++K GK +
Sbjct: 315 EGESALRMFSKM-IKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEH 373
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMES----KDLTSWNTMLAGYSINGQIE 352
L+D+ G G ++ + ++S K+ W T L+ + IE
Sbjct: 374 YGCLVDLL---GRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIE 420
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 289 KEIHGQIVKSGKKADRPLLNALMDMYAKCG------SIGYCKKVFDGMESKDLTSWNTML 342
K++H + +K + + AKC S+ Y +F G++ +NTM+
Sbjct: 47 KQVHARFIKLSLFYSSS--FSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMI 104
Query: 343 AGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQ 402
GY E+A+ ++EM++ PD T+ LL C+ EG++ + G++
Sbjct: 105 RGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLE 164
Query: 403 PSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
+ L+++ GR G+++ + V + K + S W S++++
Sbjct: 165 ADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS-WSSMVSA 207
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
+S LL C + +L G +H LL + + N +++ L+ +Y CG LD+A +FQ
Sbjct: 238 VSALL-ACANTGALNLGMSIHGFLLRNISEL--NIIVQTSLVDMYVKCGCLDKALHIFQK 294
Query: 126 EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV 185
E+ + AM G + + + AL ++ M+ +EP + + L AC+ G +
Sbjct: 295 MEKR-NNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKE 353
Query: 186 GRAIHAQLAKRDE-EADQVVNNALLRFYVECGCSGDVLRVFEVMP-QRNVVSWNTLIA 241
GR + A++ K + E L+ G + L + +P ++N V W T ++
Sbjct: 354 GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/608 (35%), Positives = 326/608 (53%), Gaps = 17/608 (2%)
Query: 34 NPTLKSLCKSGKLEEALRL----IESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHL 89
N + S G+ +AL L I S Y + L C + E G+ LH +
Sbjct: 314 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT--FTSALAACFTPDFFEKGRILHGLV 371
Query: 90 LHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRL 147
+ S + N + + L+++Y G + E+RRV + P V W A+ GY+ +
Sbjct: 372 VVSG--LFYNQIIGNALVSMYGKIGEMSESRRVLL---QMPRRDVVAWNALIGGYAEDED 426
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS-RVGRAIHAQLAKRDEEADQVVNN 206
+AL ++ M V L AC GD G+ +HA + E+D+ V N
Sbjct: 427 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 486
Query: 207 ALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMG 266
+L+ Y +CG +F + RN+++WN ++A + G E L M+ G+
Sbjct: 487 SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFGVS 545
Query: 267 FSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKV 326
+ + L A+L L G+++HG VK G + D + NA DMY+KCG IG K+
Sbjct: 546 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 605
Query: 327 FDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLT 386
++ L SWN +++ +G E+ F EM+ I+P +TFVSLL+ CSH GL
Sbjct: 606 LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLV 665
Query: 387 SEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLN 445
+G +++++ +D+G++P++EH C++D+LGRSG+L EA T MPMK + +W SLL
Sbjct: 666 DKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 725
Query: 446 SCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
SC++ GN+ AAE L ++EP + YV+ SN++A G WE V+ VR+ M + IKK
Sbjct: 726 SCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKK 785
Query: 506 AGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEM 565
CSW+++K ++ +F G + ++ Y K+ + + IK+SGY+ +T L D +EE
Sbjct: 786 QACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLED-IKKLIKESGYVADTSQALQDTDEEQ 844
Query: 566 KVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTN 625
K + HSERLA +AL+ T G +RI KNLR+C DCHS K VSRV R IVLRD
Sbjct: 845 KEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQY 904
Query: 626 RFHHFENG 633
RFHHFE G
Sbjct: 905 RFHHFERG 912
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 132 ESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS-RVGRAIH 190
E W M G R L E + +R M ++P +F + + AC G R G +H
Sbjct: 6 EVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVH 65
Query: 191 AQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVF 250
+AK +D V+ A+L Y G +VFE MP RNVVSW +L+ G+S +G+
Sbjct: 66 GFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPE 125
Query: 251 ETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNAL 310
E +D ++ M+ EG+G + +++ V+ C L G++I GQ+VKSG ++ + N+L
Sbjct: 126 EVIDIYKGMR-GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSL 184
Query: 311 MDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDG 370
+ M G++ Y +FD M +D SWN++ A Y+ NG IE++ +F M R + +
Sbjct: 185 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 244
Query: 371 ITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARN 430
T +LLS H G+ L+ G + L+ + +G+ EA V +
Sbjct: 245 TTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQ 304
Query: 431 MPMKLSGSIWGSLLNSCRLDG 451
MP K S W SL+ S DG
Sbjct: 305 MPTKDLIS-WNSLMASFVNDG 324
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 175/371 (47%), Gaps = 7/371 (1%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
I+ L+ C R + + H +K ++ + + + ++ LY V G + +R+VF
Sbjct: 44 IASLVTAC-GRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF-- 100
Query: 126 EEEDPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS 183
EE P +V W ++ +GYS +E + +Y+ M V + S+ + +C + D
Sbjct: 101 -EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 159
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
+GR I Q+ K E+ V N+L+ G +F+ M +R+ +SWN++ A +
Sbjct: 160 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 219
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKAD 303
+ G + E+ F M+ S T++T+L + + G+ IHG +VK G +
Sbjct: 220 AQNGHIEESFRIFSLMRRFHDEVNS-TTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 278
Query: 304 RPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR 363
+ N L+ MYA G VF M +KDL SWN+++A + +G+ A+ L MI
Sbjct: 279 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 338
Query: 364 SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDE 423
S + +TF S L+ C +G+ L+ G+ + LV + G+ G++ E
Sbjct: 339 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 398
Query: 424 ALTVARNMPMK 434
+ V MP +
Sbjct: 399 SRRVLLQMPRR 409
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 124/254 (48%), Gaps = 5/254 (1%)
Query: 228 MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTAL-H 286
MP RN VSWNT+++G G E ++ FR M G+ S + +++ C + ++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASLVTACGRSGSMFR 59
Query: 287 SGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYS 346
G ++HG + KSG +D + A++ +Y G + +KVF+ M +++ SW +++ GYS
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 347 INGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLE 406
G+ E+ ID++ M + + + ++S C S G++ + G++ L
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 407 HYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNV--SLAETAAERLF 464
L+ +LG G +D A + M + + S W S+ + +G++ S + R F
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 465 EIEPNNAGNYVMLS 478
E N+ +LS
Sbjct: 239 HDEVNSTTVSTLLS 252
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/560 (37%), Positives = 322/560 (57%), Gaps = 26/560 (4%)
Query: 102 LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAM--AIGYSRNRLSKEALLVYRDML 159
L K++ L S ++ A RVF D E+ +W + A + +R +EA ++YR ML
Sbjct: 85 LYGKILQLSSSFSDVNYAFRVF-DSIENHSSFMWNTLIRACAHDVSR-KEEAFMLYRKML 142
Query: 160 AR-SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCS 218
R P F LKAC + G+ +H Q+ K D VNN L+ Y CGC
Sbjct: 143 ERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCL 202
Query: 219 GDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLK-EGMGFSWITLTTVLP 277
+VF+ MP+R++VSWN++I G+ L FR MQ E G+ T+ +VL
Sbjct: 203 DLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGY---TMQSVLS 259
Query: 278 ICAQLTALHSGKEIHGQIVKSGK---KADRPLLNALMDMYAKCGSIGYCKKVFDGMESKD 334
CA L +L G H +++ D + N+L++MY KCGS+ ++VF GM+ +D
Sbjct: 260 ACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRD 319
Query: 335 LTSWNTMLAGYSINGQIEKAIDLFDEMI--RSNIRPDGITFVSLLSGCSHSGLTSEGQKF 392
L SWN M+ G++ +G+ E+A++ FD M+ R N+RP+ +TFV LL C+H G ++G+++
Sbjct: 320 LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQY 379
Query: 393 FNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG 451
F++M +DY ++P+LEHY C+VD++ R+G + EA+ + +MPMK IW SLL++C G
Sbjct: 380 FDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Query: 452 -NVSLAETAAERLFEIEPNN-------AGNYVMLSNIYADAGMWEGVKRVREMMAIRGIK 503
+V L+E A + + +N +G YV+LS +YA A W V VR++M+ GI+
Sbjct: 440 ASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIR 499
Query: 504 KDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTD--VVLHDI 561
K+ GCS I+I H F AG +S ++ Y ++ + + ++ GY+P+ ++
Sbjct: 500 KEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQL-KVIDDRLRSIGYLPDRSQAPLVDAT 558
Query: 562 NEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVL 621
N+ K + HSERLA F LI+ PIRI KNLRVC DCH K +S+V I++
Sbjct: 559 NDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIV 618
Query: 622 RDTNRFHHFENGTCSCMDHW 641
RD RFHHF++G+CSC+D+W
Sbjct: 619 RDRVRFHHFKDGSCSCLDYW 638
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 131/312 (41%), Gaps = 7/312 (2%)
Query: 170 FSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMP 229
FS+A + C+D+ + A + +E A + +L+ RVF+ +
Sbjct: 52 FSLA-ETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 230 QRNVVSWNTLIAGFSGQ-GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSG 288
+ WNTLI + + E +R M + T VL CA + G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 289 KEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSIN 348
K++H QIVK G D + N L+ +Y CG + +KVFD M + L SWN+M+
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG---QKFFNLMQDYGVQPSL 405
G+ + A+ LF EM RS PDG T S+LS C+ G S G F D V +
Sbjct: 231 GEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDV 289
Query: 406 EHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE 465
L+++ + G L A V + M + S W +++ G A +R+ +
Sbjct: 290 LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLAS-WNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 466 IEPNNAGNYVML 477
N N V
Sbjct: 349 KRENVRPNSVTF 360
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/609 (33%), Positives = 341/609 (55%), Gaps = 14/609 (2%)
Query: 43 SGKLEEALRLI-ESPNPTPYQDE-DISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENP 100
+G L+ +L L E Y +E S L C +LE G ++H L ++
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM--V 142
Query: 101 TLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
+ + L+ +YS CGR++EA +VF+ D W AM G+ +AL + M
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFR-RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQE 201
Query: 161 RSVE--PGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEE--ADQVVNNALLRFYVECG 216
+++ P F + LKAC+ G G+ IH L + + + +L+ YV+CG
Sbjct: 202 ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261
Query: 217 CSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL 276
+ F+ + ++ ++SW++LI G++ +G+ E + F+ +Q S+ L++++
Sbjct: 262 YLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSF-ALSSII 320
Query: 277 PICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT 336
+ A L GK++ VK + +LN+++DMY KCG + +K F M+ KD+
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVI 380
Query: 337 SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFN-L 395
SW ++ GY +G +K++ +F EM+R NI PD + ++++LS CSHSG+ EG++ F+ L
Sbjct: 381 SWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL 440
Query: 396 MQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSL 455
++ +G++P +EHYAC+VD+LGR+G+L EA + MP+K + IW +LL+ CR+ G++ L
Sbjct: 441 LETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIEL 500
Query: 456 AETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQ 515
+ + L I+ N NYVM+SN+Y AG W RE+ I+G+KK+AG SW++I++
Sbjct: 501 GKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIER 560
Query: 516 RIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSE 575
+H F +G S + + A ++ GY+ LHDI++E K + HSE
Sbjct: 561 EVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSE 620
Query: 576 RLAAVFALIHTG---AGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFEN 632
+LA AL G G IR+ KNLRVCVDCH ++K +S++T+ V+RD RFH FE+
Sbjct: 621 KLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFED 680
Query: 633 GTCSCMDHW 641
G CSC D+W
Sbjct: 681 GCCSCGDYW 689
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 216/458 (47%), Gaps = 27/458 (5%)
Query: 60 PYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEA 119
P Q +++ +L +C + + G ++H +LL S + N + LI +Y C A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGL--NLITSNYLIDMYCKCREPLMA 60
Query: 120 RRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTD 179
+VF E S W A+ G+ N K +L ++ +M + + P F FS LKAC
Sbjct: 61 YKVFDSMPERNVVS-WSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 180 VGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTL 239
+ G IH K E V N+L+ Y +CG + +VF + R+++SWN +
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 240 IAGFSGQGKVFETLDAFRAMQ---LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIV 296
IAGF G + LD F MQ +KE TLT++L C+ +++GK+IHG +V
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERP--DEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 297 KSGKK--ADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKA 354
+SG + + +L+D+Y KCG + +K FD ++ K + SW++++ GY+ G+ +A
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEA 297
Query: 355 IDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQ-PSLEHYACL-- 411
+ LF + N + D S++ + L +G++ MQ V+ PS + L
Sbjct: 298 MGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ----MQALAVKLPSGLETSVLNS 353
Query: 412 -VDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE----- 465
VD+ + G +DEA M +K S W ++ G L + + +E
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQLKDVIS-WTVVITGY---GKHGLGKKSVRIFYEMLRHN 409
Query: 466 IEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIK 503
IEP+ +LS + EG + +++ GIK
Sbjct: 410 IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIK 447
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/581 (35%), Positives = 327/581 (56%), Gaps = 48/581 (8%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTL--KSKLITLYSVCGRLDEARRVFQDE 126
+L C ++ G+K+H S +V + TL + L+++Y CG L EAR V DE
Sbjct: 146 VLKACSCSGTIVIGRKIHG----SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL-DE 200
Query: 127 EEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVG 186
W ++ +GY++N+ +AL V R+M + + + L A ++ V
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV- 259
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQ 246
YV+ +F M ++++VSWN +I +
Sbjct: 260 ------------------------MYVK--------DMFFKMGKKSLVSWNVMIGVYMKN 287
Query: 247 GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPL 306
E ++ + M+ +G +++T+VLP C +AL GK+IHG I + + L
Sbjct: 288 AMPVEAVELYSRME-ADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI 366
NAL+DMYAKCG + + VF+ M+S+D+ SW M++ Y +G+ A+ LF ++ S +
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 367 RPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEAL 425
PD I FV+ L+ CSH+GL EG+ F LM D Y + P LEH AC+VD+LGR+GK+ EA
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Query: 426 TVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAG 485
++M M+ + +WG+LL +CR+ + + AA++LF++ P +G YV+LSNIYA AG
Sbjct: 467 RFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAG 526
Query: 486 MWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAI 545
WE V +R +M +G+KK+ G S +++ + IHTF+ G S +S Y ++ + L +
Sbjct: 527 RWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYREL-DVLVKKM 585
Query: 546 KDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHT-----GAGMPIRITKNLRV 600
K+ GY+P+++ LHD+ EE K + HSE+LA VFAL++T + IRITKNLR+
Sbjct: 586 KELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRI 645
Query: 601 CVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
C DCH K +S++T R I++RDTNRFH F G CSC D+W
Sbjct: 646 CGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 153/355 (43%), Gaps = 40/355 (11%)
Query: 99 NPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWV--AMAIGYSRNRLSKEALLVYR 156
N +L KL+ Y+ + AR+VF +E P +V + M Y N E + V+
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVF---DEIPERNVIIINVMIRSYVNNGFYGEGVKVFG 129
Query: 157 DMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECG 216
M +V P ++ F LKAC+ G +GR IH K + V N L+ Y +CG
Sbjct: 130 TMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCG 189
Query: 217 CSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL 276
+ V + M +R+VVSWN+L+ G++ + + L+ R M+ + T+ ++L
Sbjct: 190 FLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME-SVKISHDAGTMASLL 248
Query: 277 PICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT 336
P + T ++ Y K +F M K L
Sbjct: 249 PAVSNTTT---------------------------------ENVMYVKDMFFKMGKKSLV 275
Query: 337 SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM 396
SWN M+ Y N +A++L+ M PD ++ S+L C + S G+K +
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 397 QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG 451
+ + P+L L+D+ + G L++A V NM + S W +++++ G
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS-WTAMISAYGFSG 389
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 162/386 (41%), Gaps = 42/386 (10%)
Query: 182 DSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIA 241
D R R +H+++ D + + L+R Y +VF+ +P+RNV+ N +I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 242 -----GFSGQG-KVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI 295
GF G+G KVF T+ T VL C+ + G++IHG
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRP-------DHYTFPCVLKACSCSGTIVIGRKIHGSA 166
Query: 296 VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAI 355
K G + + N L+ MY KCG + + V D M +D+ SWN+++ GY+ N + + A+
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 226
Query: 356 DLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDIL 415
++ EM I D T SLL S++ T+E + M + SL + ++ +
Sbjct: 227 EVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVSWNVMIGVY 284
Query: 416 GRSGKLDEALTVARNMP---MKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAG 472
++ EA+ + M + S+L +C G+ S + IE
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC---GDTSALSLGKKIHGYIERKKLI 341
Query: 473 NYVMLSN----IYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDF 528
++L N +YA G E + V E M R + SW + + F G
Sbjct: 342 PNLLLENALIDMYAKCGCLEKARDVFENMKSRDV-----VSWTAMIS-AYGFSGRGCDAV 395
Query: 529 RSSAEYLKIWNALSNAIKDSGYIPNT 554
AL + ++DSG +P++
Sbjct: 396 -----------ALFSKLQDSGLVPDS 410
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 324/607 (53%), Gaps = 39/607 (6%)
Query: 70 LHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED 129
L LC ++L + LH H++ K +++ L + L+ +Y CG A +VF DE
Sbjct: 10 LQLCARNRTLTTAKALHAHIV--KLGIVQCCPLANTLVNVYGKCGAASHALQVF-DEMPH 66
Query: 130 PPESVWVAMAIGYSRNRLSKEALLVYRDMLARS-VEPGNFAFSVALKACTDVGDSRVGRA 188
W ++ ++ LS + L V+ + + S + P +F FS +KAC ++G GR
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 189 IHAQLAKRDEEADQVVNNALLRFYVECG-----------------------CSG------ 219
+H + D+VV ++L+ Y +CG SG
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 220 --DVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLP 277
+ L +F ++P +N+ SW LI+GF GK E F M+ + + L++++
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 278 ICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTS 337
CA L A +G+++HG ++ G + + NAL+DMYAKC + K +F M +D+ S
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 338 WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM- 396
W +++ G + +GQ EKA+ L+D+M+ ++P+ +TFV L+ CSH G +G++ F M
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 397 QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
+DYG++PSL+HY CL+D+LGRSG LDEA + MP W +LL++C+ G +
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 426
Query: 457 ETAAERLF-EIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQ 515
A+ L + + Y++LSNIYA A +W V R + ++KD G S +++++
Sbjct: 427 IRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRK 486
Query: 516 RIHTFVAGGSSDFRSSAEYLKIWNALSNAIK-DSGYIPNTDVVLHDINEEMKVMWVCGHS 574
F AG +S + ++ L ++ +GY+P+T +LHD++E+ K + HS
Sbjct: 487 ETEVFYAGETSH-PLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHS 545
Query: 575 ERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGT 634
ER A + L+ G PIRI KNLRVC DCH +K +S +T R I++RD R+HHF+ G
Sbjct: 546 ERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGK 605
Query: 635 CSCMDHW 641
CSC D W
Sbjct: 606 CSCNDFW 612
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 163/372 (43%), Gaps = 41/372 (11%)
Query: 63 DEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRV 122
D S L+ C + S++HG+++H H + S+ + +KS L+ +Y+ CG L+ A+ V
Sbjct: 105 DFVFSALVKACANLGSIDHGRQVHCHFIVSE--YANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 123 FQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP-------------GNFA 169
F D W AM GY+++ +EAL ++R + +++ G A
Sbjct: 163 F-DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 170 FSV-------------------ALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLR 210
FSV + AC ++ S GR +H + ++ ++NAL+
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALID 281
Query: 211 FYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWI 270
Y +C +F M R+VVSW +LI G + G+ + L + M + G+ + +
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM-VSHGVKPNEV 340
Query: 271 TLTTVLPICAQLTALHSGKEIHGQIVKS-GKKADRPLLNALMDMYAKCGSIGYCKKVFDG 329
T ++ C+ + + G+E+ + K G + L+D+ + G + + +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 330 ME-SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFV---SLLSGCSHSGL 385
M D +W +L+ G+ + I + D ++ S D T++ ++ + S G
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGK 460
Query: 386 TSEGQKFFNLMQ 397
SE ++ M+
Sbjct: 461 VSEARRKLGEME 472
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/579 (37%), Positives = 331/579 (57%), Gaps = 12/579 (2%)
Query: 70 LHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED 129
L C S K + GQ++H L K + N ++ + L+TLY+ G L+E R++F E
Sbjct: 422 LSSCASLKWAKLGQQIHGESL--KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH 479
Query: 130 PPESVWVAMAIGYSRNRLS-KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRA 188
S W ++ +R+ S EA++ + + + FS L A + + +G+
Sbjct: 480 DQVS-WNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538
Query: 189 IHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR-NVVSWNTLIAGFSGQG 247
IH K + + NAL+ Y +CG ++F M +R + V+WN++I+G+
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598
Query: 248 KVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL 307
+ + LD M L+ G TVL A + L G E+H V++ ++D +
Sbjct: 599 LLAKALDLVWFM-LQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 657
Query: 308 NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM-IRSNI 366
+AL+DMY+KCG + Y + F+ M ++ SWN+M++GY+ +GQ E+A+ LF+ M +
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717
Query: 367 RPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEAL 425
PD +TFV +LS CSH+GL EG K F M D YG+ P +EH++C+ D+LGR+G+LD+
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLE 777
Query: 426 TVARNMPMKLSGSIWGSLLNSC-RLDG-NVSLAETAAERLFEIEPNNAGNYVMLSNIYAD 483
MPMK + IW ++L +C R +G L + AAE LF++EP NA NYV+L N+YA
Sbjct: 778 DFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAA 837
Query: 484 AGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSN 543
G WE + + R+ M +KK+AG SW+ +K +H FVAG S + Y K+ L+
Sbjct: 838 GGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKL-KELNR 896
Query: 544 AIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALI-HTGAGMPIRITKNLRVCV 602
++D+GY+P T L+D+ +E K + HSE+LA F L + +PIRI KNLRVC
Sbjct: 897 KMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCG 956
Query: 603 DCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
DCHS K +S++ R I+LRD+NRFHHF++G CSC D W
Sbjct: 957 DCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 189/369 (51%), Gaps = 6/369 (1%)
Query: 79 LEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAM 138
L+ G+++H H++ + G V + + L+ +Y+ CG + +ARRVF D W +M
Sbjct: 329 LKKGREVHGHVI-TTGLVDFMVGIGNGLVNMYAKCGSIADARRVFY-FMTDKDSVSWNSM 386
Query: 139 AIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDE 198
G +N EA+ Y+ M + PG+F +L +C + +++G+ IH + K
Sbjct: 387 ITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 446
Query: 199 EADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVF-ETLDAFR 257
+ + V+NAL+ Y E G + ++F MP+ + VSWN++I + + E + F
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFL 506
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
Q + G + IT ++VL + L+ GK+IHG +K+ + NAL+ Y KC
Sbjct: 507 NAQ-RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKC 565
Query: 318 GSIGYCKKVFDGM-ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
G + C+K+F M E +D +WN+M++GY N + KA+DL M+++ R D + ++
Sbjct: 566 GEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 377 LSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLS 436
LS + G + ++ + + LVD+ + G+LD AL MP++ S
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 685
Query: 437 GSIWGSLLN 445
S W S+++
Sbjct: 686 YS-WNSMIS 693
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 221/506 (43%), Gaps = 54/506 (10%)
Query: 82 GQKLHQHLLHS---KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WV 136
G + HS K R+ ++ L + LI Y G AR+VF +E P + W
Sbjct: 15 GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF---DEMPLRNCVSWA 71
Query: 137 AMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV--GRAIHAQLA 194
+ GYSRN KEAL+ RDM+ + +AF L+AC ++G + GR IH +
Sbjct: 72 CIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMF 131
Query: 195 KRDEEADQVVNNALLRFYVEC-GCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETL 253
K D VV+N L+ Y +C G G L F + +N VSWN++I+ +S G
Sbjct: 132 KLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAF 191
Query: 254 DAFRAMQLKEGMGFSWITLTTVLPICAQLTA--LHSGKEIHGQIVKSGKKADRPLLNALM 311
F +MQ +G + T +++ LT + ++I I KSG D + + L+
Sbjct: 192 RIFSSMQY-DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLV 250
Query: 312 DMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGI 371
+AK GS+ Y +KVF+ ME+++ + N ++ G E+A LF +M S I
Sbjct: 251 SAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPE 309
Query: 372 TFVSLLSGCSHSGLTSE-GQKFFNLMQDYGVQPSLEHYAC-----LVDILGRSGKLDEAL 425
++V LLS L E G K + + + L + LV++ + G + +A
Sbjct: 310 SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADAR 369
Query: 426 TVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNN--AGNYVMLSNIYAD 483
V M K S S W S++ LD N E A ER + ++ G++ ++S++ +
Sbjct: 370 RVFYFMTDKDSVS-WNSMITG--LDQNGCFIE-AVERYKSMRRHDILPGSFTLISSLSSC 425
Query: 484 AGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSN 543
A + W ++ Q+IH D S + NAL
Sbjct: 426 ASL----------------------KWAKLGQQIHGESLKLGIDLNVS-----VSNALMT 458
Query: 544 AIKDSGYIPNTDVVLHDINEEMKVMW 569
++GY+ + + E +V W
Sbjct: 459 LYAETGYLNECRKIFSSMPEHDQVSW 484
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 155/329 (47%), Gaps = 19/329 (5%)
Query: 180 VGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTL 239
VG R H++L K + D + N L+ Y+E G S +VF+ MP RN VSW +
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 240 IAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL--TALHSGKEIHGQIVK 297
++G+S G+ E L R M +KEG+ + +VL C ++ + G++IHG + K
Sbjct: 74 VSGYSRNGEHKEALVFLRDM-VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 298 SGKKADRPLLNALMDMYAKC-GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAID 356
D + N L+ MY KC GS+GY F +E K+ SWN++++ YS G A
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 357 LFDEMIRSNIRPDGITFVSLL-SGCSHSGLTSEGQKFFN----LMQDYGVQPSLEHYACL 411
+F M RP TF SL+ + CS LT + +Q G+ L + L
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGL 249
Query: 412 VDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAE--RLFEIEPN 469
V +SG L A V M + + ++ G ++ R + + + ++ P
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE 309
Query: 470 NAGNYVMLSNIYADAGMWE--GVKRVREM 496
+YV+L + + + + E G+K+ RE+
Sbjct: 310 ---SYVILLSSFPEYSLAEEVGLKKGREV 335
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/616 (33%), Positives = 339/616 (55%), Gaps = 33/616 (5%)
Query: 42 KSGKLEEALRLIESPNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQHLLHSKGRVIEN 99
++G E++L+L+ + + + L I + + + +H +L K + +
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL--KTCYVLD 281
Query: 100 PTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSKEALLVYRD 157
P + L+ LY+ G + +A +VF E P V W M + +N EA+ ++
Sbjct: 282 PRVGVGLLQLYTQLGDMSDAFKVFN---EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIR 338
Query: 158 MLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGC 217
M V P F S L C S +G +H + K + D V+NAL+ Y +C
Sbjct: 339 MREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEK 398
Query: 218 SGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLP 277
+++F + +N VSWNT+I G+ G+ + FR L+ + + +T ++ L
Sbjct: 399 MDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE-ALRNQVSVTEVTFSSALG 457
Query: 278 ICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTS 337
CA L ++ G ++HG +K+ + N+L+DMYAKCG I + + VF+ ME+ D+ S
Sbjct: 458 ACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVAS 517
Query: 338 WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF-NLM 396
WN +++GYS +G +A+ + D M + +P+G+TF+ +LSGCS++GL +GQ+ F +++
Sbjct: 518 WNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMI 577
Query: 397 QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
+D+G++P LEHY C+V +LGRSG+LD+A+ + +P + S IW ++L++ N A
Sbjct: 578 RDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFA 637
Query: 457 ETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQR 516
+AE + +I P + YV++SN+YA A W V +R+ M G+KK+ G SWI+ +
Sbjct: 638 RRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGD 697
Query: 517 IHTFVAGGSSDFRSSAEYLKIWNA----LSNAIKDSGYIPNTDVVLHDINEEM--KVMWV 570
+H F G S +K+ N L+ +GY+P+ + VL D+++E K +WV
Sbjct: 698 VHYFSVG-----LSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWV 752
Query: 571 CGHSERLAAVFALIHTGAGMP-----IRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTN 625
HSERLA + L+ MP I I KNLR+C DCHS MK +S + +R +V+RD N
Sbjct: 753 --HSERLALAYGLVR----MPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMN 806
Query: 626 RFHHFENGTCSCMDHW 641
RFHHF G CSC DHW
Sbjct: 807 RFHHFHAGVCSCGDHW 822
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 165/348 (47%), Gaps = 5/348 (1%)
Query: 99 NPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDM 158
N + + LI YSVCG +D AR VF+ VW + Y N +++L + M
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDI-VVWAGIVSCYVENGYFEDSLKLLSCM 238
Query: 159 LARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCS 218
P N+ F ALKA +G + +H Q+ K D V LL+ Y + G
Sbjct: 239 RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDM 298
Query: 219 GDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF-SWITLTTVLP 277
D +VF MP+ +VV W+ +IA F G E +D F ++++E + TL+++L
Sbjct: 299 SDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF--IRMREAFVVPNEFTLSSILN 356
Query: 278 ICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTS 337
CA G+++HG +VK G D + NAL+D+YAKC + K+F + SK+ S
Sbjct: 357 GCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS 416
Query: 338 WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ 397
WNT++ GY G+ KA +F E +R+ + +TF S L C+ G + L
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAI 476
Query: 398 DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLN 445
+ L+D+ + G + A +V M + + W +L++
Sbjct: 477 KTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALIS 523
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 11/275 (4%)
Query: 162 SVEPG--NFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSG 219
S+ PG + A+ L+ C D +AIH + K+ D N LL YV+ G
Sbjct: 42 SIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDK 101
Query: 220 DVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPIC 279
D L +F+ MP+RN VS+ TL G++ Q + + +EG + T+ L +
Sbjct: 102 DALNLFDEMPERNNVSFVTLAQGYACQDPI-----GLYSRLHREGHELNPHVFTSFLKLF 156
Query: 280 AQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWN 339
L +H IVK G ++ + AL++ Y+ CGS+ + VF+G+ KD+ W
Sbjct: 157 VSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWA 216
Query: 340 TMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGL--TSEGQKFFNLMQ 397
+++ Y NG E ++ L M + P+ TF + L G ++G L
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 398 DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMP 432
Y + P + L+ + + G + +A V MP
Sbjct: 277 CYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMP 309
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 323/578 (55%), Gaps = 16/578 (2%)
Query: 67 SQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDE 126
+ LL ++ ++L+ G+++H H++ + + N ++++ ++ +Y CG L A+RVF
Sbjct: 188 TTLLKSLVNPRALDFGRQIHAHVI--RAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 127 EEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVG 186
P + + +GY++ +++AL ++ D++ VE +F FSV LKAC + + +G
Sbjct: 246 AVKKPVAC-TGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQ 246
+ IHA +AK E++ V L+ FY++C R F+ + + N VSW+ +I+G+
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM 364
Query: 247 GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPL 306
+ E + F++++ K + T T++ C+ L + G ++H +K +
Sbjct: 365 SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 424
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI 366
+AL+ MY+KCG + +VF+ M++ D+ +W ++G++ G +A+ LF++M+ +
Sbjct: 425 ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM 484
Query: 367 RPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEAL 425
+P+ +TF+++L+ CSH+GL +G+ + M + Y V P+++HY C++DI RSG LDEAL
Sbjct: 485 KPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL 544
Query: 426 TVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAG 485
+NMP + W L+ C N+ L E A E L +++P + YV+ N+Y AG
Sbjct: 545 KFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAG 604
Query: 486 MWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAI 545
WE + ++M R +KK+ CSWIQ K +IH F+ G ++ Y K +
Sbjct: 605 KWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEK--------L 656
Query: 546 KDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALI--HTGAGMPIRITKNLRVCVD 603
K+ D+ ++ E + + HSERLA F LI H A PI++ KNLR C D
Sbjct: 657 KEFDGFMEGDMFQCNMTERREQLL--DHSERLAIAFGLISVHGNAPAPIKVFKNLRACPD 714
Query: 604 CHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
CH + K VS VT IV+RD+ RFHHF+ G CSC D+W
Sbjct: 715 CHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 215/478 (44%), Gaps = 29/478 (6%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQ--LLHLCISRKSLEHGQKLHQHLLH 91
N L SL K KL EA ++ + S L C +SL HG+ LLH
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGR-----LLH 106
Query: 92 SKGRV-IENPT--LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLS 148
+ R+ IENP+ L++ ++ +Y C L++A ++F DE + M Y+ +
Sbjct: 107 DRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLF-DEMSELNAVSRTTMISAYAEQGIL 165
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
+A+ ++ MLA +P + ++ LK+ + GR IHA + + ++ + +
Sbjct: 166 DKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGI 225
Query: 209 LRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS 268
+ YV+CG RVF+ M + V+ L+ G++ G+ + L F + + EG+ +
Sbjct: 226 VNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDL-VTEGVEWD 284
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFD 328
+ VL CA L L+ GK+IH + K G +++ + L+D Y KC S + F
Sbjct: 285 SFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQ 344
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRP-DGITFVSLLSGCSHSGLTS 387
+ + SW+ +++GY Q E+A+ F + N + T+ S+ CS +
Sbjct: 345 EIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCN 404
Query: 388 EGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM--PMKLSGSIWGSLLN 445
G + + S + L+ + + G LD+A V +M P ++ W + ++
Sbjct: 405 IGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVA---WTAFIS 461
Query: 446 SCRLDGNVSLAETAAERLFE------IEPNNAGNYVMLSNIYADAGMWEGVKRVREMM 497
GN S A RLFE ++PN+ ++ + + AG+ E K + M
Sbjct: 462 GHAYYGNAS----EALRLFEKMVSCGMKPNSV-TFIAVLTACSHAGLVEQGKHCLDTM 514
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/602 (34%), Positives = 326/602 (54%), Gaps = 10/602 (1%)
Query: 42 KSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPT 101
+S + E RL+ + N P DE + S SLE + L G + N
Sbjct: 145 RSKEAVEMYRLMITNNVLP--DEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVF 202
Query: 102 LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
+ S L+ +Y G+ EA+ V D E+ + A+ +GYS+ EA+ ++ ML
Sbjct: 203 VGSALVDMYVKFGKTREAKLVL-DRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVE 261
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV 221
V+P + ++ L +C ++ D G+ IH + K E+ +LL Y+ C D
Sbjct: 262 KVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDS 321
Query: 222 LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQ 281
LRVF+ + N VSW +LI+G G+ L FR M +++ + + TL++ L C+
Sbjct: 322 LRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM-MRDSIKPNSFTLSSALRGCSN 380
Query: 282 LTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTM 341
L G++IHG + K G D+ + L+D+Y KCG + VFD + D+ S NTM
Sbjct: 381 LAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTM 440
Query: 342 LAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGV 401
+ Y+ NG +A+DLF+ MI ++P+ +T +S+L C++S L EG + F+ + +
Sbjct: 441 IYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKI 500
Query: 402 QPSLEHYACLVDILGRSGKLDEA--LTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETA 459
+ +HYAC+VD+LGR+G+L+EA LT P + +W +LL++C++ V +AE
Sbjct: 501 MLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLV---LWRTLLSACKVHRKVEMAERI 557
Query: 460 AERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHT 519
++ EIEP + G +++SN+YA G W V ++ M +KK+ SW++I + HT
Sbjct: 558 TRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHT 617
Query: 520 FVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAA 579
F+AG +S + L+ L KD GY+ + V D+ E K + HSE+LA
Sbjct: 618 FMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAI 677
Query: 580 VFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMD 639
FA + G IRI KNLRVCVDCHSW+K VSRV +R I+ RD+ RFHHF +G+CSC D
Sbjct: 678 AFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGD 736
Query: 640 HW 641
+W
Sbjct: 737 YW 738
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 188/379 (49%), Gaps = 6/379 (1%)
Query: 50 LRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITL 109
RL+ T + SQLL CI +S+ + + H+L S SKL+
Sbjct: 52 FRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSG---FPAEISGSKLVDA 108
Query: 110 YSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFA 169
CG +D AR+VF D + W ++ ++R SKEA+ +YR M+ +V P +
Sbjct: 109 SLKCGDIDYARQVF-DGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYT 167
Query: 170 FSVALKACTDVGDSRVGRAIHAQLAKRDEEADQV-VNNALLRFYVECGCSGDVLRVFEVM 228
S KA +D+ + + H E V V +AL+ YV+ G + + V + +
Sbjct: 168 LSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV 227
Query: 229 PQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSG 288
+++VV LI G+S +G+ E + AF++M L E + + T +VL C L + +G
Sbjct: 228 EEKDVVLITALIVGYSQKGEDTEAVKAFQSM-LVEKVQPNEYTYASVLISCGNLKDIGNG 286
Query: 289 KEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSIN 348
K IHG +VKSG ++ +L+ MY +C + +VF +E + SW ++++G N
Sbjct: 287 KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQN 346
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHY 408
G+ E A+ F +M+R +I+P+ T S L GCS+ + EG++ ++ YG
Sbjct: 347 GREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAG 406
Query: 409 ACLVDILGRSGKLDEALTV 427
+ L+D+ G+ G D A V
Sbjct: 407 SGLIDLYGKCGCSDMARLV 425
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 163/353 (46%), Gaps = 17/353 (4%)
Query: 170 FSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMP 229
FS L+ C D + I A + K A ++ + L+ ++CG +VF+ M
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPA-EISGSKLVDASLKCGDIDYARQVFDGMS 126
Query: 230 QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGK 289
+R++V+WN+LIA + E ++ +R M + + TL++V + L+ +
Sbjct: 127 ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEY-TLSSVFKAFSDLSLEKEAQ 185
Query: 290 EIHGQIVKSGKKADRPLL-NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSIN 348
HG V G + + +AL+DMY K G K V D +E KD+ ++ GYS
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 245
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHY 408
G+ +A+ F M+ ++P+ T+ S+L C + G+ LM G + +L
Sbjct: 246 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 409 ACLVDILGRSGKLDEALTVAR--NMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE- 465
L+ + R +D++L V + P ++S W SL++ +G +A ++
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVS---WTSLISGLVQNGREEMALIEFRKMMRD 362
Query: 466 -IEPNNAGNYVMLSNIY--ADAGMWEGVKRVREMMAIRGIKKD--AGCSWIQI 513
I+PN ++ + S + ++ M+E +++ ++ G +D AG I +
Sbjct: 363 SIKPN---SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDL 412
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/672 (32%), Positives = 351/672 (52%), Gaps = 84/672 (12%)
Query: 44 GKLEEALRLI-----ESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIE 98
G+ +A+R++ E PT + ++ +L + + +E G+K+H ++ R
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFT---LTNVLASVAATRCMETGKKVHSFIVKLGLR--G 179
Query: 99 NPTLKSKLITLYSVCGRLDEARRVF-----------------------------QDEEED 129
N ++ + L+ +Y+ CG A+ VF Q E+
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 130 PPESV-WVAMAIGYSRNRLSKEALLVYRDMLARSV-EPGNFAFSVALKACTDVGDSRVGR 187
+ V W +M G+++ AL ++ ML S+ P F + L AC ++ +G+
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 188 AIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR------------------------ 223
IH+ + + +V NAL+ Y CG R
Sbjct: 300 QIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIK 359
Query: 224 ---------VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
+F + R+VV+W +I G+ G E ++ FR+M + G + TL
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM-VGGGQRPNSYTLAA 418
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME-SK 333
+L + + L +L GK+IHG VKSG+ + NAL+ MYAK G+I + FD + +
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER 478
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
D SW +M+ + +G E+A++LF+ M+ +RPD IT+V + S C+H+GL ++G+++F
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538
Query: 394 NLMQDYG-VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGN 452
++M+D + P+L HYAC+VD+ GR+G L EA MP++ WGSLL++CR+ N
Sbjct: 539 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 598
Query: 453 VSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQ 512
+ L + AAERL +EP N+G Y L+N+Y+ G WE ++R+ M +KK+ G SWI+
Sbjct: 599 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658
Query: 513 IKQRIHTFVAGGSSDFRSSAEYL---KIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMW 569
+K ++H F + + Y+ KIW + IK GY+P+T VLHD+ EE+K
Sbjct: 659 VKHKVHVFGVEDGTHPEKNEIYMTMKKIW----DEIKKMGYVPDTASVLHDLEEEVKEQI 714
Query: 570 VCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHH 629
+ HSE+LA F LI T +RI KNLRVC DCH+ +K +S++ R I++RDT RFHH
Sbjct: 715 LRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHH 774
Query: 630 FENGTCSCMDHW 641
F++G CSC D+W
Sbjct: 775 FKDGFCSCRDYW 786
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 165/405 (40%), Gaps = 69/405 (17%)
Query: 88 HLLHSKGRVIENPTLKS----KLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYS 143
+ LH++ E P + +++ YS G +D F D+ W M +GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFF-DQLPQRDSVSWTTMIVGYK 122
Query: 144 RNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQV 203
+A+ V DM+ +EP F + L + G+ +H+ + K +
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 204 VNNALLRFYVECG------------CSGDV-------------------LRVFEVMPQRN 232
V+N+LL Y +CG D+ + FE M +R+
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 233 VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIH 292
+V+WN++I+GF+ +G LD F M + TL +VL CA L L GK+IH
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 293 GQIVKSGKKADRPLLNALMDMYAKCGSI-------------------------GY----- 322
IV +G +LNAL+ MY++CG + GY
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 323 ---CKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG 379
K +F ++ +D+ +W M+ GY +G +AI+LF M+ RP+ T ++LS
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV 422
Query: 380 CSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
S S G++ G S+ L+ + ++G + A
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 42/270 (15%)
Query: 165 PGNFAFSVALKACTDVGDSRVGRA--------IHAQLAKRDEEADQVVNNALLRFYVECG 216
P + S L+ CT++ V ++ +H ++ K + N L+ Y + G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 217 CSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAF-------------------- 256
+ ++F+ MP R SWNT+++ +S +G + T + F
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 257 --------RAM--QLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPL 306
R M +KEG+ + TLT VL A + +GK++H IVK G + + +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI 366
N+L++MYAKCG K VFD M +D++SWN M+A + GQ++ A+ F++M +I
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 367 RPDGITFVSLLSGCSHSGLTSEGQKFFNLM 396
+T+ S++SG + G F+ M
Sbjct: 244 ----VTWNSMISGFNQRGYDLRALDIFSKM 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 127/293 (43%), Gaps = 53/293 (18%)
Query: 270 ITLTTVLPICAQL--------TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
++L+T+L +C L + + +H +++KSG L+N LM++Y+K G
Sbjct: 7 LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYAL 66
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
+ +K+FD M + SWNT+L+ YS G ++ + FD++ + D +++ +++ G
Sbjct: 67 HARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR----DSVSWTTMIVGYK 122
Query: 382 HSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWG 441
+ G + + M G++P+ L ++L +VA M+ +G
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPT---QFTLTNVLA---------SVAATRCME-TGKKVH 169
Query: 442 SLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRG 501
S + L GNVS++ + L N+YA G K V + M +R
Sbjct: 170 SFIVKLGLRGNVSVSNS------------------LLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 502 IKKDAGCSWIQIKQRIHTFVAG---GSSDFRSSAEY-LKIWNALSNAIKDSGY 550
I SW + +H V + F AE + WN++ + GY
Sbjct: 212 IS-----SWNAMIA-LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGY 258
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 215/605 (35%), Positives = 340/605 (56%), Gaps = 49/605 (8%)
Query: 78 SLEHGQKLHQHLLHSKGRVIENPTLKSKLI-TLYSVCGRLDE-ARRVFQDEEEDPPESVW 135
+L +++H H+L KG + ++ + +KLI TL + +D ARRV + + P +W
Sbjct: 61 NLNQIKQIHGHVLR-KG-LDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNP-FLW 117
Query: 136 VAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAK 195
A+ GY+ EA+ +Y M + P +F FS LKAC + D +GR HAQ +
Sbjct: 118 TAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFR 177
Query: 196 RDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIA-------------- 241
V N ++ YV+C +VF+ MP+R+V+SW LIA
Sbjct: 178 LRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAEL 237
Query: 242 -----------------GFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTA 284
GF+ K E L+ F M+ K G+ +T+ + CAQL A
Sbjct: 238 FESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME-KSGIRADEVTVAGYISACAQLGA 296
Query: 285 LHSGKEIHGQIVKSG-KKADRPLL-NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTML 342
KSG +D ++ +AL+DMY+KCG++ VF M +K++ ++++M+
Sbjct: 297 SKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMI 356
Query: 343 AGYSINGQIEKAIDLFDEMI-RSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYG 400
G + +G+ ++A+ LF M+ ++ I+P+ +TFV L CSHSGL +G++ F+ M Q +G
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFG 416
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAA 460
VQP+ +HY C+VD+LGR+G+L EAL + + M ++ G +WG+LL +CR+ N +AE AA
Sbjct: 417 VQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAA 476
Query: 461 ERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQ-RIHT 519
E LFE+EP+ GNY++LSN+YA AG W GV RVR+++ +G+KK SW+ K ++H
Sbjct: 477 EHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHK 536
Query: 520 FVAGGSSDFRSSAEYLKIWNALSNAIKD---SGYIPNTDVVLHDINEEMKVMWVCGHSER 576
F G + S+ KI + L ++ GY P+ V +D+++ K + + H+E+
Sbjct: 537 FFPGNLNHPMSN----KIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEK 592
Query: 577 LAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCS 636
LA F+L+ T I I KNLR+C+DCH +M+ S VT ++I++RD RFHHF +G CS
Sbjct: 593 LALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCS 652
Query: 637 CMDHW 641
C D W
Sbjct: 653 CGDFW 657
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 32/317 (10%)
Query: 271 TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI--GYCKKVFD 328
+L + L C L + K+IHG +++ G +L L+ K G Y ++V +
Sbjct: 51 SLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSE 388
++ ++ W ++ GY+I G+ ++AI ++ M + I P TF +LL C +
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 389 GQKFFNLMQDYGVQPSLEHYA--CLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
G++F Q + ++ Y ++D+ + +D A V MP + S W L+ +
Sbjct: 168 GRQFH--AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVIS-WTELIAA 224
Query: 447 CRLDGNVSLAETAAERLFEIEPNN--AGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKK 504
GN+ E AAE LFE P M++ +A E ++ + M GI+
Sbjct: 225 YARVGNM---ECAAE-LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYF-DRMEKSGIRA 279
Query: 505 DAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEE 564
D + + I G+S + A + + SGY P+ VV+ +
Sbjct: 280 DE----VTVAGYISACAQLGASKYADRAVQIA---------QKSGYSPSDHVVIGSALID 326
Query: 565 MKVMWVCGHSERLAAVF 581
M CG+ E VF
Sbjct: 327 MYSK--CGNVEEAVNVF 341
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 178/464 (38%), Positives = 283/464 (60%), Gaps = 4/464 (0%)
Query: 180 VGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTL 239
+ D R+G IH+ + + + V N+LL Y CG +VF+ MP++++V+WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 240 IAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSG 299
I GF+ GK E L + M K G+ T+ ++L CA++ AL GK +H ++K G
Sbjct: 61 INGFAENGKPEEALALYTEMNSK-GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 300 KKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFD 359
+ N L+D+YA+CG + K +FD M K+ SW +++ G ++NG ++AI+LF
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 360 EMIRSN-IRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGR 417
M + + P ITFV +L CSH G+ EG ++F M ++Y ++P +EH+ C+VD+L R
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 418 SGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVML 477
+G++ +A ++MPM+ + IW +LL +C + G+ LAE A ++ ++EPN++G+YV+L
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLL 299
Query: 478 SNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKI 537
SN+YA W V+++R+ M G+KK G S +++ R+H F+ G S +S A Y K+
Sbjct: 300 SNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKL 359
Query: 538 WNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKN 597
++ ++ GY+P V D+ EE K V HSE++A F LI T PI + KN
Sbjct: 360 -KEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 418
Query: 598 LRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
LRVC DCH +K VS+V R IV+RD +RFHHF+NG+CSC D+W
Sbjct: 419 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 134/274 (48%), Gaps = 13/274 (4%)
Query: 82 GQKLHQHLLHSK-GRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAI 140
G+ +H ++ S G +I +++ L+ LY+ CG + A +VF D+ + W ++
Sbjct: 7 GETIHSVVIRSGFGSLI---YVQNSLLHLYANCGDVASAYKVF-DKMPEKDLVAWNSVIN 62
Query: 141 GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEA 200
G++ N +EAL +Y +M ++ ++P F L AC +G +G+ +H + K
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 201 DQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQ 260
+ +N LL Y CG + +F+ M +N VSW +LI G + G E ++ F+ M+
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 261 LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADR-PLLNALMDMYAKCGS 319
EG+ IT +L C+ + G E ++ + K R ++D+ A+ G
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 320 IGYCKKVFDGMES----KDLTSWNTMLAGYSING 349
+ KK ++ ++S ++ W T+L +++G
Sbjct: 243 V---KKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 355 bits (912), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 196/530 (36%), Positives = 300/530 (56%), Gaps = 10/530 (1%)
Query: 117 DEARRVFQDEEEDPPES--VWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVAL 174
D+AR++F + E E+ +++ ++ R R + EA + +R + P + F L
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI---DGHPNSITFCAFL 216
Query: 175 KACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVV 234
AC+D +G +H + + + D V N L+ FY +C +F M +N V
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAV 276
Query: 235 SWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQ 294
SW +L+A + Q E K+ + S +++VL CA + L G+ IH
Sbjct: 277 SWCSLVAAYV-QNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 335
Query: 295 IVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKA 354
VK+ + + +AL+DMY KCG I ++ FD M K+L + N+++ GY+ GQ++ A
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 395
Query: 355 IDLFDEMIRSNI--RPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACL 411
+ LF+EM P+ +TFVSLLS CS +G G K F+ M+ YG++P EHY+C+
Sbjct: 396 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 455
Query: 412 VDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNA 471
VD+LGR+G ++ A + MP++ + S+WG+L N+CR+ G L AAE LF+++P ++
Sbjct: 456 VDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDS 515
Query: 472 GNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSS 531
GN+V+LSN +A AG W VRE + GIKK AG SWI +K ++H F A S +
Sbjct: 516 GNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNK 575
Query: 532 AEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMP 591
E L N ++ +GY P+ + L+D+ EE K V HSE+LA F L+ +P
Sbjct: 576 -EIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVP 634
Query: 592 IRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
IRITKNLR+C DCHS+ K VS +R I++RD NRFH F++G CSC D+W
Sbjct: 635 IRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 194/443 (43%), Gaps = 10/443 (2%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
LL IS S+ G+ +H ++ + P L + LI +YS + AR V +
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSP-PPPFLANYLINMYSKLDHPESARLVLR---L 67
Query: 129 DPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVG 186
P +V W ++ G ++N AL+ + +M V P +F F A KA + G
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQ 246
+ IHA K D V + Y + D ++F+ +P+RN+ +WN I+
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 247 GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPL 306
G+ E ++AF + +G S IT L C+ L+ G ++HG +++SG D +
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNS-ITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI 366
N L+D Y KC I + +F M +K+ SW +++A Y N + EKA L+ + +
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 367 RPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALT 426
S+LS C+ G+ V+ ++ + LVD+ G+ G ++++
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 427 VARNMPMK---LSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYAD 483
MP K S+ G + ++D ++L E A R PN +LS
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 484 AGMWEGVKRVREMMAIRGIKKDA 506
+ G+K M + GI+ A
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGA 449
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 125/277 (45%), Gaps = 3/277 (1%)
Query: 169 AFSVALKACTDVGDSRVGRAIHAQLAKR-DEEADQVVNNALLRFYVECGCSGDVLRVFEV 227
A + LK R+GR +HA++ K D + N L+ Y + V +
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 228 MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHS 287
P RNVVSW +LI+G + G L F M+ +EG+ + T A L +
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMR-REGVVPNDFTFPCAFKAVASLRLPVT 126
Query: 288 GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSI 347
GK+IH VK G+ D + + DMY K +K+FD + ++L +WN ++
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 348 NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEH 407
+G+ +AI+ F E R + P+ ITF + L+ CS + G + L+ G +
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 408 YACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
L+D G+ ++ + + M K + S W SL+
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVS-WCSLV 282
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 355 bits (912), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 202/563 (35%), Positives = 304/563 (53%), Gaps = 44/563 (7%)
Query: 116 LDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALK 175
L A+ VF D + P +W M G+S + + +LL+Y+ ML S + F LK
Sbjct: 65 LPYAQIVF-DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLK 123
Query: 176 ACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVS 235
AC+++ IHAQ+ K E D N+L+ Y G +F+ +P+ + VS
Sbjct: 124 ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVS 183
Query: 236 WNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT------------------------ 271
WN++I G+ GK+ L FR M K + SW T
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAI--SWTTMISGYVQADMNKEALQLFHEMQNS 241
Query: 272 --------LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYC 323
L L CAQL AL GK IH + K+ + D L L+DMYAKCG +
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
Query: 324 KKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHS 383
+VF ++ K + +W +++GY+ +G +AI F EM + I+P+ ITF ++L+ CS++
Sbjct: 302 LEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYT 361
Query: 384 GLTSEGQK-FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGS 442
GL EG+ F+++ +DY ++P++EHY C+VD+LGR+G LDEA + MP+K + IWG+
Sbjct: 362 GLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGA 421
Query: 443 LLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGI 502
LL +CR+ N+ L E E L I+P + G YV +NI+A W+ R +M +G+
Sbjct: 422 LLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGV 481
Query: 503 KKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKI---WNALSNAIKDSGYIPNTDVVLH 559
K GCS I ++ H F+AG RS E KI W + ++++GY+P + +L
Sbjct: 482 AKVPGCSTISLEGTTHEFLAGD----RSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLL 537
Query: 560 D-INEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRL 618
D ++++ + V HSE+LA + LI T G IRI KNLRVC DCH K +S++ +R
Sbjct: 538 DLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRD 597
Query: 619 IVLRDTNRFHHFENGTCSCMDHW 641
IV+RD RFHHF +G CSC D+W
Sbjct: 598 IVMRDRTRFHHFRDGKCSCGDYW 620
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP 165
+I Y G++D A +F+ E S W M GY + ++KEAL ++ +M VEP
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAIS-WTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 166 GNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVF 225
N + + AL AC +G G+ IH+ L K D V+ L+ Y +CG + L VF
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 226 EVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTAL 285
+ + +++V +W LI+G++ G E + F MQ K G+ + IT T VL C+ +
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQ-KMGIKPNVITFTAVLTACSYTGLV 364
Query: 286 HSGKEIHGQIVKSGK-KADRPLLNALMDMYAKCGSIGYCKKVFDGMESK-DLTSWNTMLA 343
GK I + + K ++D+ + G + K+ M K + W +L
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Query: 344 GYSINGQIE 352
I+ IE
Sbjct: 425 ACRIHKNIE 433
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 131/301 (43%), Gaps = 38/301 (12%)
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR----VFEVMPQRNVVSWNTLIAG 242
+ IHA++ K D L F + S D L VF+ + + WN +I G
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCIS-STSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 243 FSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKA 302
FS + +L ++ M L + T ++L C+ L+A +IH QI K G +
Sbjct: 90 FSCSDEPERSLLLYQRM-LCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 303 DRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIE---------- 352
D +N+L++ YA G+ +FD + D SWN+++ GY G+++
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 353 ---------------------KAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
+A+ LF EM S++ PD ++ + LS C+ G +G+
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG 451
+ + ++ L+D+ + G+++EAL V +N+ K S W +L++ G
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK-SVQAWTALISGYAYHG 327
Query: 452 N 452
+
Sbjct: 328 H 328
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 47 EEALRLIESPNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKS 104
+EAL+L + + +++S L C +LE G+ +H +L +K R+ + L
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL--NKTRIRMDSVLGC 286
Query: 105 KLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVE 164
LI +Y+ CG ++EA VF++ ++ ++ W A+ GY+ + +EA+ + +M ++
Sbjct: 287 VLIDMYAKCGEMEEALEVFKNIKKKSVQA-WTALISGYAYHGHGREAISKFMEMQKMGIK 345
Query: 165 PGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNN--ALLRFYVECGCSGDVL 222
P F+ L AC+ G G+ I + +RD + + ++ G +
Sbjct: 346 PNVITFTAVLTACSYTGLVEEGKLIFYSM-ERDYNLKPTIEHYGCIVDLLGRAGLLDEAK 404
Query: 223 RVFEVMPQR-NVVSWNTLI 240
R + MP + N V W L+
Sbjct: 405 RFIQEMPLKPNAVIWGALL 423
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 40/263 (15%)
Query: 289 KEIHGQIVKSGKKADRPLLNALMDMYAKCGS---IGYCKKVFDGMESKDLTSWNTMLAGY 345
K+IH +++K+G D + + S + Y + VFDG + D WN M+ G+
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 346 SINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS-----------HSGLTSEGQ---- 390
S + + E+++ L+ M+ S+ + TF SLL CS H+ +T G
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 391 ----------------KFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
K +L+ D +P + ++ ++GK+D ALT+ R M K
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210
Query: 435 LSGSIWGSLLNS-CRLDGNVSLAETAAE-RLFEIEPNNAGNYVMLSNIYADAGMWEGVKR 492
+ S W ++++ + D N + E + ++EP+N LS A G E K
Sbjct: 211 NAIS-WTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC-AQLGALEQGKW 268
Query: 493 VREMMAIRGIKKDA--GCSWIQI 513
+ + I+ D+ GC I +
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDM 291
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 355 bits (912), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 214/654 (32%), Positives = 336/654 (51%), Gaps = 46/654 (7%)
Query: 30 PPP---LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLH 86
PP NP L+ L +S + + + + + S L L K + +
Sbjct: 73 PPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 132
Query: 87 QHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNR 146
H + K + +P +++ + +Y+ CGR++ AR VF DE W M Y R
Sbjct: 133 LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF-DEMSHRDVVTWNTMIERYCRFG 191
Query: 147 LSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQ---- 202
L EA ++ +M +V P + AC G+ R RAI+ L + D D
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 203 ---------------------------VVNNALLRFYVECGCSGDVLRVFEVMPQRNVVS 235
V+ A++ Y +CG D +F+ ++++V
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 236 WNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI 295
W T+I+ + E L F M G+ +++ +V+ CA L L K +H I
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCS-GIKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Query: 296 VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAI 355
+G +++ + NAL++MYAKCG + + VF+ M +++ SW++M+ S++G+ A+
Sbjct: 371 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 430
Query: 356 DLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDI 414
LF M + N+ P+ +TFV +L GCSHSGL EG+K F M D Y + P LEHY C+VD+
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDL 490
Query: 415 LGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNY 474
GR+ L EAL V +MP+ + IWGSL+++CR+ G + L + AA+R+ E+EP++ G
Sbjct: 491 FGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGAL 550
Query: 475 VMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEY 534
V++SNIYA WE V+ +R +M + + K+ G S I + H F+ G +S+ Y
Sbjct: 551 VLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIY 610
Query: 535 LKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHT-------G 587
K+ +S +K +GY+P+ VL D+ EE K V HSE+LA F L++
Sbjct: 611 AKLDEVVSK-LKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDS 669
Query: 588 AGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
G+ IRI KNLRVC DCH + K VS+V R I++RD RFH ++NG CSC D+W
Sbjct: 670 CGV-IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 187/447 (41%), Gaps = 41/447 (9%)
Query: 58 PTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLD 117
P P + +L KSL H ++LH H+L R + N L S L L ++
Sbjct: 4 PPPIASTAANTILEKLSFCKSLNHIKQLHAHIL----RTVINHKLNSFLFNLSVSSSSIN 59
Query: 118 E--ARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALK 175
A VF P V+ SR+ + +L Y+ + F+F LK
Sbjct: 60 LSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILK 119
Query: 176 ACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVS 235
A + V G +H K D V + Y CG VF+ M R+VV+
Sbjct: 120 AVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVT 179
Query: 236 WNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI 295
WNT+I + G V E F M+ M I L ++ C + + + I+ +
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI-LCNIVSACGRTGNMRYNRAIYEFL 238
Query: 296 VKSGKKADRPLLNALMDMYA-------------------------------KCGSIGYCK 324
+++ + D LL AL+ MYA KCG + +
Sbjct: 239 IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQ 298
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
+FD E KDL W TM++ Y + ++A+ +F+EM S I+PD ++ S++S C++ G
Sbjct: 299 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLG 358
Query: 385 LTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
+ + + + + G++ L L+++ + G LD V MP + S W S++
Sbjct: 359 ILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVS-WSSMI 417
Query: 445 NSCRLDGNVSLAETAAERLFE--IEPN 469
N+ + G S A + R+ + +EPN
Sbjct: 418 NALSMHGEASDALSLFARMKQENVEPN 444
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 355 bits (910), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 191/565 (33%), Positives = 320/565 (56%), Gaps = 13/565 (2%)
Query: 83 QKLHQHLLHS-KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIG 141
Q++H HL+ + GR + +L +KLITL + +F P + ++ ++
Sbjct: 26 QQVHAHLIVTGYGR---SRSLLTKLITLACSARAIAYTHLLFLSVPL-PDDFLFNSVIKS 81
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
S+ RL + YR ML+ +V P N+ F+ +K+C D+ R+G+ +H D
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
V AL+ FY +CG +VF+ MP++++V+WN+L++GF G E + F M+
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR- 200
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
+ G T ++L CAQ A+ G +H I+ G + L AL+++Y++CG +G
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRS-NIRPDGITFVSLLSGC 380
++VFD M+ ++ +W M++ Y +G ++A++LF++M P+ +TFV++LS C
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 381 SHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK---LS 436
+H+GL EG+ + M + Y + P +EH+ C+VD+LGR+G LDEA + +
Sbjct: 321 AHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 437 GSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREM 496
++W ++L +C++ N L A+RL +EP+N G++VMLSNIYA +G + V +R+
Sbjct: 381 PALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDG 440
Query: 497 MAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDV 556
M ++K G S I+++ + + F G S + + E + L + K+ GY P ++
Sbjct: 441 MMRNNLRKQVGYSVIEVENKTYMFSMGDESH-QETGEIYRYLETLISRCKEIGYAPVSEE 499
Query: 557 VLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTR 616
V+H + EE K + HSE+LA F L+ T + I I KNLR+C DCHS K +S V+
Sbjct: 500 VMHQVEEEEKEFALRYHSEKLAVAFGLLKT-VDVAITIVKNLRICEDCHSAFKYISIVSN 558
Query: 617 RLIVLRDTNRFHHFENGTCSCMDHW 641
R I +RD RFHHF+NG+CSC+D+W
Sbjct: 559 RQITVRDKLRFHHFQNGSCSCLDYW 583
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 217/630 (34%), Positives = 341/630 (54%), Gaps = 59/630 (9%)
Query: 52 LIESPNPTPYQDED----ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLI 107
L+ S T D+D +++++ C+ ++ ++ H + +K + T S LI
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVF-HGMRAKNTI----TWNSLLI 100
Query: 108 TLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGN 167
+ R+ EA ++F DE +P + M Y RN ++A + M + N
Sbjct: 101 GISKDPSRMMEAHQLF-DEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWN 159
Query: 168 FAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEV 227
+ G+ R + + +++E V NA++ Y+ECG F+V
Sbjct: 160 ----TMITGYARRGEMEKARELFYSMMEKNE----VSWNAMISGYIECGDLEKASHFFKV 211
Query: 228 MPQR--------------------------------NVVSWNTLIAGFSGQGKVFETLDA 255
P R N+V+WN +I+G+ + + L
Sbjct: 212 APVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKL 271
Query: 256 FRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYA 315
FRAM L+EG+ + L++ L C++L+AL G++IH + KS D L +L+ MY
Sbjct: 272 FRAM-LEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYC 330
Query: 316 KCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVS 375
KCG +G K+F+ M+ KD+ +WN M++GY+ +G +KA+ LF EMI + IRPD ITFV+
Sbjct: 331 KCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVA 390
Query: 376 LLSGCSHSGLTSEGQKFF-NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
+L C+H+GL + G +F ++++DY V+P +HY C+VD+LGR+GKL+EAL + R+MP +
Sbjct: 391 VLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Query: 435 LSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVR 494
+++G+LL +CR+ NV LAE AAE+L ++ NA YV L+NIYA WE V RVR
Sbjct: 451 PHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVR 510
Query: 495 EMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKI---WNALSNAIKDSGYI 551
+ M + K G SWI+I+ ++H F SSD R E I L +K +GY
Sbjct: 511 KRMKESNVVKVPGYSWIEIRNKVHHF---RSSD-RIHPELDSIHKKLKELEKKMKLAGYK 566
Query: 552 PNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAV 611
P + LH++ EE K + HSE+LA F I G I++ KNLR+C DCH +K +
Sbjct: 567 PELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFI 626
Query: 612 SRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
S + +R I++RDT RFHHF++G+CSC D+W
Sbjct: 627 SEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/594 (34%), Positives = 315/594 (53%), Gaps = 7/594 (1%)
Query: 51 RLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLY 110
R + + D ++S L+ S S+E + LH ++ S + + +L+ Y
Sbjct: 19 RFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVS--YRHGFIGDQLVGCY 76
Query: 111 SVCGRLDEARRVFQDEEEDPPESVWVAMAIGYS-RNRLSKEALLVYRDMLAR-SVEPGNF 168
G A ++F DE + W ++ GYS R L K ++ R M++ P
Sbjct: 77 LRLGHDVCAEKLF-DEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEV 135
Query: 169 AFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVM 228
F + AC G GR IH + K + V NA + +Y + G ++FE +
Sbjct: 136 TFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDL 195
Query: 229 PQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSG 288
+N+VSWNT+I Q + E A+ M + G T VL C + +
Sbjct: 196 SIKNLVSWNTMIV-IHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
Query: 289 KEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSIN 348
+ IHG I+ G ++ + AL+D+Y+K G + VF + S D +W MLA Y+ +
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATH 314
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEH 407
G AI F+ M+ I PD +TF LL+ CSHSGL EG+ +F M + Y + P L+H
Sbjct: 315 GFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDH 374
Query: 408 YACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIE 467
Y+C+VD+LGRSG L +A + + MPM+ S +WG+LL +CR+ + L AAERLFE+E
Sbjct: 375 YSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELE 434
Query: 468 PNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSD 527
P + NYVMLSNIY+ +G+W+ R+R +M +G+ + +GCS+I+ +IH FV G S
Sbjct: 435 PRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSH 494
Query: 528 FRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTG 587
S K+ + GY T+ VLHD+ E++K + HSE++A F L+
Sbjct: 495 PESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVS 554
Query: 588 AGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
PI I KNLR+C DCH KA+S + +R I++RD+ RFHHF +G+CSC D+W
Sbjct: 555 PMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/574 (35%), Positives = 317/574 (55%), Gaps = 14/574 (2%)
Query: 73 CISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPE 132
C + +E G++ H L K +I + +++ L+ +YS+C EA RV +D P
Sbjct: 146 CSNSGRIEEGKQFHGCFL--KYGLISHEFVRNTLVYMYSLCSGNGEAIRVL----DDLPY 199
Query: 133 ---SVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAI 189
SV+ + GY KE L V R N + +L+ +++ D + +
Sbjct: 200 CDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQV 259
Query: 190 HAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKV 249
H+++ + A+ AL+ Y +CG RVF+ +N+ NT I Q K
Sbjct: 260 HSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIF-LNTTIMDAYFQDKS 318
Query: 250 FE-TLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLN 308
FE L+ F M KE + T +L A+L+ L G +HG ++KSG + + N
Sbjct: 319 FEEALNLFSKMDTKEVPPNEY-TFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN 377
Query: 309 ALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRP 368
AL++MYAK GSI +K F GM +D+ +WNTM++G S +G +A++ FD MI + P
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIP 437
Query: 369 DGITFVSLLSGCSHSGLTSEGQKFFN-LMQDYGVQPSLEHYACLVDILGRSGKLDEALTV 427
+ ITF+ +L CSH G +G +FN LM+ + VQP ++HY C+V +L ++G +A
Sbjct: 438 NRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDF 497
Query: 428 ARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMW 487
R P++ W +LLN+C + N L + AE E PN++G YV+LSNI+A + W
Sbjct: 498 MRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREW 557
Query: 488 EGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKD 547
EGV +VR +M RG+KK+ G SWI I+ + H F+A + + Y K+ +S IK
Sbjct: 558 EGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSK-IKP 616
Query: 548 SGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSW 607
GY P+ HD++EE + + HSE+LA + LI T P+ +TKN+R+C DCHS
Sbjct: 617 LGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSA 676
Query: 608 MKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+K +S++++R IV+RD+NRFHHF +G CSC D+W
Sbjct: 677 IKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 199/423 (47%), Gaps = 9/423 (2%)
Query: 45 KLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLL-HSKGRVIENPTLK 103
K ++ L+ TP+ + +++LL +C + L G+ +H HL+ ++ E+
Sbjct: 13 KWDKLASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQI 72
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDM-LARS 162
+ LI LY C AR++F E S W AM GY + E L +++ M +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVS-WCAMMKGYQNSGFDFEVLKLFKSMFFSGE 131
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL 222
P F +V K+C++ G G+ H K + + V N L+ Y C +G+ +
Sbjct: 132 SRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAI 191
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTV--LPICA 280
RV + +P ++ +++ ++G+ G E LD R ++ F W LT + L + +
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANED---FVWNNLTYLSSLRLFS 248
Query: 281 QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNT 340
L L+ ++H ++V+ G A+ AL++MY KCG + Y ++VFD ++++ T
Sbjct: 249 NLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTT 308
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
++ Y + E+A++LF +M + P+ TF LL+ + L +G L+ G
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSG 368
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAA 460
+ + LV++ +SG +++A M + W ++++ C G A A
Sbjct: 369 YRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHGLGREALEAF 427
Query: 461 ERL 463
+R+
Sbjct: 428 DRM 430
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/553 (35%), Positives = 311/553 (56%), Gaps = 14/553 (2%)
Query: 97 IENPTLKSKLITLYSVC---GRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALL 153
IE+ + +KLI + + AR +F+ E P ++ +MA GYSR E
Sbjct: 57 IEDVSFVAKLINFCTESPTESSMSYARHLFEAMSE-PDIVIFNSMARGYSRFTNPLEVFS 115
Query: 154 VYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYV 213
++ ++L + P N+ F LKAC GR +H K + + V L+ Y
Sbjct: 116 LFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYT 175
Query: 214 ECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLT 273
EC VF+ + + VV +N +I G++ + + E L FR MQ K + + ITL
Sbjct: 176 ECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY-LKPNEITLL 234
Query: 274 TVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK 333
+VL CA L +L GK IH K + AL+DM+AKCGS+ +F+ M K
Sbjct: 235 SVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK 294
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
D +W+ M+ Y+ +G+ EK++ +F+ M N++PD ITF+ LL+ CSH+G EG+K+F
Sbjct: 295 DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Query: 394 NLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGN 452
+ M +G+ PS++HY +VD+L R+G L++A +P+ + +W LL +C N
Sbjct: 355 SQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414
Query: 453 VSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQ 512
+ LAE +ER+FE++ ++ G+YV+LSN+YA WE V +R++M R K GCS I+
Sbjct: 415 LDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
Query: 513 IKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKD---SGYIPNTDVVLH-DINEEMKVM 568
+ +H F +G ++ K+ AL +K+ SGY+P+T +V+H ++N++ K +
Sbjct: 475 VNNVVHEFFSGDGVKSATT----KLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEI 530
Query: 569 WVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFH 628
+ HSE+LA F L++T G IR+ KNLRVC DCH+ K +S + R +VLRD RFH
Sbjct: 531 TLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFH 590
Query: 629 HFENGTCSCMDHW 641
HFE+G CSC D W
Sbjct: 591 HFEDGKCSCGDFW 603
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 139/289 (48%), Gaps = 8/289 (2%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
LL C K+LE G++L H L K + +N + LI +Y+ C +D AR VF D
Sbjct: 135 LLKACAVAKALEEGRQL--HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVF-DRIV 191
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRA 188
+P + AM GY+R EAL ++R+M + ++P L +C +G +G+
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 189 IHAQLAKRDEEADQV-VNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQG 247
IH + AK+ V VN AL+ + +CG D + +FE M ++ +W+ +I ++ G
Sbjct: 252 IH-KYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG 310
Query: 248 KVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIV-KSGKKADRPL 306
K +++ F M+ E + IT +L C+ + G++ Q+V K G
Sbjct: 311 KAEKSMLMFERMR-SENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKH 369
Query: 307 LNALMDMYAKCGSIGYCKKVFDGME-SKDLTSWNTMLAGYSINGQIEKA 354
+++D+ ++ G++ + D + S W +LA S + ++ A
Sbjct: 370 YGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/583 (34%), Positives = 322/583 (55%), Gaps = 13/583 (2%)
Query: 68 QLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLIT---LYSVCGRLDEARRVFQ 124
LL L +S H +++H LL + +I N + ++ L + ++ + RVF
Sbjct: 13 HLLSLIVSSTGKLHLRQIHALLLRTS--LIRNSDVFHHFLSRLALSLIPRDINYSCRVFS 70
Query: 125 DEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGN-FAFSVALKACTDVGDS 183
+ +P S M +S ++ E ++R + S P N + S ALK C GD
Sbjct: 71 -QRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDL 129
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
G IH ++ +D ++ L+ Y C S D +VF+ +P+R+ VSWN L + +
Sbjct: 130 LGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCY 189
Query: 244 SGQGKVFETLDAFRAMQ--LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKK 301
+ + L F M+ + + +T L CA L AL GK++H I ++G
Sbjct: 190 LRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLS 249
Query: 302 ADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM 361
L N L+ MY++CGS+ +VF GM +++ SW +++G ++NG ++AI+ F+EM
Sbjct: 250 GALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM 309
Query: 362 IRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ--DYGVQPSLEHYACLVDILGRSG 419
++ I P+ T LLS CSHSGL +EG FF+ M+ ++ ++P+L HY C+VD+LGR+
Sbjct: 310 LKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRAR 369
Query: 420 KLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSN 479
LD+A ++ ++M MK +IW +LL +CR+ G+V L E L E++ AG+YV+L N
Sbjct: 370 LLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLN 429
Query: 480 IYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWN 539
Y+ G WE V +R +M + I GCS I+++ +H F+ S R Y K+
Sbjct: 430 TYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIY-KMLA 488
Query: 540 ALSNAIKDSGYIPNTDVVLHDI-NEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNL 598
++ +K +GY+ LH++ +EE K + HSE+LA F ++ T G IR+TKNL
Sbjct: 489 EINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNL 548
Query: 599 RVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
R CVDCH++ K VS V R++++RD +RFHHF+ G+CSC D W
Sbjct: 549 RTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 203/619 (32%), Positives = 325/619 (52%), Gaps = 43/619 (6%)
Query: 64 EDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVF 123
+ + LL C R L G++LH L S + L + L Y+ G + A+++F
Sbjct: 7 QKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLF 66
Query: 124 QDEEEDPPESV-WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGD 182
+ ++V W + +SR L ++ ++ +M + VE + + C + D
Sbjct: 67 DEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLED 126
Query: 183 SRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFE---------------- 226
+ H K V NAL+ Y +CG +V R+FE
Sbjct: 127 LGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDT 186
Query: 227 ---------------VMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
MP+RN V+W ++AG+ G G E L+ M + G G +++T
Sbjct: 187 VVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVT 246
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKS----GKKA---DRPLLNALMDMYAKCGSIGYCK 324
L ++L CAQ L G+ +H +K G++A D + AL+DMYAKCG+I
Sbjct: 247 LCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSM 306
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
VF M +++ +WN + +G +++G+ ID+F +MIR ++PD +TF ++LS CSHSG
Sbjct: 307 NVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSG 365
Query: 385 LTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
+ EG + F+ ++ YG++P ++HYAC+VD+LGR+G ++EA + R MP+ + + GSLL
Sbjct: 366 IVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLL 425
Query: 445 NSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKK 504
SC + G V +AE L ++ P N +++SN+Y G + +R + RGI+K
Sbjct: 426 GSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRK 485
Query: 505 DAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPN-TDVVLHDINE 563
G S I + +H F +G S R+ YLK+ N + I+ +GY+P+ + +V H +
Sbjct: 486 IPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKL-NEVIERIRSAGYVPDVSGLVSHSEGD 544
Query: 564 -EMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLR 622
E K +C HSE+LA F L+ T P+ + KNLR+C DCHS MK VS+V R I++R
Sbjct: 545 LEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIR 604
Query: 623 DTNRFHHFENGTCSCMDHW 641
D NRFH F+ G+CSC D+W
Sbjct: 605 DRNRFHQFKGGSCSCSDYW 623
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 154/386 (39%), Gaps = 74/386 (19%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRV 96
L S + G L +++L + +D+S + + K + G H + K V
Sbjct: 83 LSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGV 142
Query: 97 IENPTLKSKLITLYSVCGRLDEARRVFQDEEE---------------------------D 129
+ + + + L+ +Y CG + E +R+F++ EE +
Sbjct: 143 LTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHE 202
Query: 130 PPES---VWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNF-AFSVALKACTDVGDSRV 185
PE W M GY ++E L + +M+ R NF L AC G+ V
Sbjct: 203 MPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVV 262
Query: 186 GRAIHAQLAKRD----EEA---DQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNT 238
GR +H K++ EEA D +V AL+ Y +CG + VF +M +RNVV+WN
Sbjct: 263 GRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNA 322
Query: 239 LIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKS 298
L +G + GK +D F Q+ + +T T VL C+ HSG IV
Sbjct: 323 LFSGLAMHGKGRMVIDMFP--QMIREVKPDDLTFTAVLSACS-----HSG------IVDE 369
Query: 299 GKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLF 358
G + L F G+E K + + M+ G IE+A L
Sbjct: 370 GWRCFHSLR-------------------FYGLEPK-VDHYACMVDLLGRAGLIEEAEILM 409
Query: 359 DEMIRSNIRPDGITFVSLLSGCSHSG 384
EM + P+ + SLL CS G
Sbjct: 410 REM---PVPPNEVVLGSLLGSCSVHG 432
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 10/239 (4%)
Query: 267 FSWITLTTVLPICAQLTALHSGKEIHGQIVKSG-KKADRPLL-NALMDMYAKCGSIGYCK 324
S+ + +L CA + L GKE+H + SG KKA R L NAL YA G + +
Sbjct: 4 LSYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQ 63
Query: 325 KVFDG--MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSH 382
K+FD + KD W T+L+ +S G + ++ LF EM R + D ++ V L C+
Sbjct: 64 KLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAK 123
Query: 383 SGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGS 442
Q+ + GV S++ L+D+ G+ G + E + + K S W
Sbjct: 124 LEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK-SVVSWTV 182
Query: 443 LLNS-CRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIR 500
+L++ + +G E E E+ NA + ++ Y AG V + M R
Sbjct: 183 VLDTVVKWEG----LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFR 237
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 348 bits (893), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 203/567 (35%), Positives = 311/567 (54%), Gaps = 45/567 (7%)
Query: 77 KSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWV 136
+SL G ++H L K + + + + LI +Y CG ++ AR+VF DE P W
Sbjct: 120 RSLRTGFQMHCQAL--KHGLESHLFVGTTLIGMYGGCGCVEFARKVF-DEMHQPNLVAWN 176
Query: 137 AMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKR 196
A+ + AC D R I ++ R
Sbjct: 177 AV-----------------------------------ITACFRGNDVAGAREIFDKMLVR 201
Query: 197 DEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAF 256
+ + N +L Y++ G R+F MP R+ VSW+T+I G + G E+ F
Sbjct: 202 NHTS----WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYF 257
Query: 257 RAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAK 316
R +Q + GM + ++LT VL C+Q + GK +HG + K+G + NAL+DMY++
Sbjct: 258 RELQ-RAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSR 316
Query: 317 CGSIGYCKKVFDGMESKD-LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVS 375
CG++ + VF+GM+ K + SW +M+AG +++GQ E+A+ LF+EM + PDGI+F+S
Sbjct: 317 CGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFIS 376
Query: 376 LLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
LL CSH+GL EG+ +F+ M+ Y ++P +EHY C+VD+ GRSGKL +A MP+
Sbjct: 377 LLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIP 436
Query: 435 LSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVR 494
+ +W +LL +C GN+ LAE +RL E++PNN+G+ V+LSN YA AG W+ V +R
Sbjct: 437 PTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIR 496
Query: 495 EMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNT 554
+ M ++ IKK S +++ + ++ F AG + K+ + ++GY P
Sbjct: 497 KSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEV 556
Query: 555 DVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRV 614
L+D+ EE K V HSE+LA FAL G IRI KNLR+C DCH+ MK S+V
Sbjct: 557 ASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKV 616
Query: 615 TRRLIVLRDTNRFHHFENGTCSCMDHW 641
I++RD NRFH F++G+CSC D+W
Sbjct: 617 YGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 140/340 (41%), Gaps = 54/340 (15%)
Query: 171 SVALKACTDVGDS----RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCS-GDVL--- 222
++A+ C + +S R IH K + D L+ + C S D L
Sbjct: 2 TIAIHHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYA 58
Query: 223 -RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQ 281
R+ P+ + +NTL+ G+S + ++ F M K + + V+
Sbjct: 59 RRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN 118
Query: 282 LTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDL------ 335
+L +G ++H Q +K G ++ + L+ MY CG + + +KVFD M +L
Sbjct: 119 FRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAV 178
Query: 336 -------------------------TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDG 370
TSWN MLAGY G++E A +F EM D
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHR----DD 234
Query: 371 ITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARN 430
+++ +++ G +H+G +E +F +Q G+ P+ ++ +SG + + +
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKIL--H 292
Query: 431 MPMKLSGSIWGSLLNSCRLD-----GNVSLAETAAERLFE 465
++ +G W +N+ +D GNV +A E + E
Sbjct: 293 GFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 348 bits (893), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 214/707 (30%), Positives = 351/707 (49%), Gaps = 111/707 (15%)
Query: 42 KSGKLEEALRLIESPNPTPYQ--DEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIEN 99
+SG E+A+ L + + D + +LL +C +++ G+++H ++L + + N
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVL--RLGLESN 123
Query: 100 PTLKSKLITLYSVCGRLDEARRVFQ------------------------------DEEE- 128
++ + LI +YS G+L+ +R+VF DE E
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 129 ---DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV 185
P W ++ GY+ LSK+A+ V + M ++P + S L+A + G ++
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
G+AIH + + D V L+ Y++ G VF++M +N+V+WN+L++G S
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS- 302
Query: 246 QGKVFETLDAFRAMQLKEGM---GFSWITLTT----------------------VLPICA 280
+ + +A KEG+ +W +L + V P
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 281 QLTALHSG---------------------------------------------KEIHGQI 295
TA+ SG KE+HG
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 422
Query: 296 VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAI 355
++ D + AL+DMY K G + ++F G+++K L SWN ML GY++ G+ E+ I
Sbjct: 423 LRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGI 482
Query: 356 DLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDI 414
F M+ + + PD ITF S+LS C +SGL EG K+F+LM+ YG+ P++EH +C+VD+
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDL 542
Query: 415 LGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNY 474
LGRSG LDEA + M +K +IWG+ L+SC++ ++ LAE A +RL +EP+N+ NY
Sbjct: 543 LGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANY 602
Query: 475 VMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEY 534
+M+ N+Y++ WE V+R+R +M ++ SWIQI Q +H F A G + Y
Sbjct: 603 MMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIY 662
Query: 535 LKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRI 594
+++ +S +K SGY+P+T + DI++ K + GH+E+LA + LI PIR+
Sbjct: 663 FELYKLVSE-MKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRV 721
Query: 595 TKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
KN +C D H+ K +S + R IVL++ R HHF +G CSC D W
Sbjct: 722 VKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 132/238 (55%), Gaps = 2/238 (0%)
Query: 185 VGRAIHAQLAKRD-EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
+G IH L KR + +D V +A + FY C G ++F+ MP+R+ ++WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKAD 303
G + ++ FR MQ + T+ +L +C+ G++IHG +++ G +++
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYD-STMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 304 RPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR 363
+ N+L+ MY++ G + +KVF+ M+ ++L+SWN++L+ Y+ G ++ AI L DEM
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 364 SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKL 421
++PD +T+ SLLSG + GL+ + MQ G++PS + L+ + G L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 185/416 (44%), Gaps = 43/416 (10%)
Query: 81 HGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAI 140
HG + + L +S RV+ S + Y C L A ++F DE + W + +
Sbjct: 10 HGGLIKRGLDNSDTRVV------SASMGFYGRCVSLGFANKLF-DEMPKRDDLAWNEIVM 62
Query: 141 GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEA 200
R+ ++A+ ++R+M + + L+ C++ GR IH + + E+
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 201 DQVVNNALLRFYVECGCSGDVLRVFEVMPQRN---------------------------- 232
+ + N+L+ Y G +VF M RN
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 233 -------VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTAL 285
+V+WN+L++G++ +G + + + MQ+ G+ S +++++L A+ L
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHL 241
Query: 286 HSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGY 345
GK IHG I+++ D + L+DMY K G + Y + VFD M++K++ +WN++++G
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL 301
Query: 346 SINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSL 405
S ++ A L M + I+PD IT+ SL SG + G + M++ GV P++
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 406 EHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAE 461
+ + ++G AL V M + G ++ ++ G +SL + E
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE 417
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 29/300 (9%)
Query: 288 GKEIHGQIVKSG-KKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYS 346
G IHG ++K G +D +++A M Y +C S+G+ K+FD M +D +WN ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 347 INGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLE 406
+G EKA++LF EM S + T V LL CS+ +EG++ + G++ ++
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 407 HYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEI 466
L+ + R+GKL+ + V +M + + S W S+L+S G V + A L E+
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDR-NLSSWNSILSSYTKLGYV---DDAIGLLDEM 181
Query: 467 E-----PNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD-----------AGCSW 510
E P+ +LS YA G+ + V + M I G+K A
Sbjct: 182 EICGLKPDIVTWNSLLSG-YASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH 240
Query: 511 IQIKQRIHTFVAGGSSDFRSSAEY-LKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMW 569
+++ + IH ++ R+ Y + + L + +GY+P +V ++ + V W
Sbjct: 241 LKLGKAIHGYI------LRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAW 294
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 200/581 (34%), Positives = 323/581 (55%), Gaps = 12/581 (2%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITL--YSVCGRLDEARRVF 123
I ++L C S K L +K+H H++ + + +P++ + L+ SV G L A+ +F
Sbjct: 8 IVRMLQGCNSMKKL---RKIHSHVIING--LQHHPSIFNHLLRFCAVSVTGSLSHAQLLF 62
Query: 124 QDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV-EPGNFAFSVALKACTDVGD 182
+ DP S W + G+S + ++L Y ML SV P F F+ ALK+C +
Sbjct: 63 DHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKS 122
Query: 183 SRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAG 242
IH + + D +V +L+R Y G +VF+ MP R++VSWN +I
Sbjct: 123 IPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICC 182
Query: 243 FSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKA 302
FS G + L ++ M EG+ TL +L CA ++AL+ G +H ++
Sbjct: 183 FSHVGLHNQALSMYKRMG-NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCES 241
Query: 303 DRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMI 362
+ NAL+DMYAKCGS+ VF+GM +D+ +WN+M+ GY ++G +AI F +M+
Sbjct: 242 CVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMV 301
Query: 363 RSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKL 421
S +RP+ ITF+ LL GCSH GL EG + F +M + + P+++HY C+VD+ GR+G+L
Sbjct: 302 ASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQL 361
Query: 422 DEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIY 481
+ +L + +W +LL SC++ N+ L E A ++L ++E NAG+YV++++IY
Sbjct: 362 ENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIY 421
Query: 482 ADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNAL 541
+ A + +R+++ ++ G SWI+I ++H FV S+ Y ++ +
Sbjct: 422 SAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVI 481
Query: 542 SNAIKDSGYIP-NTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRV 600
+ AI +GY P +++ +++ HSE+LA + L+ T AG +RITKNLRV
Sbjct: 482 NRAIL-AGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRV 540
Query: 601 CVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
C DCHS+ K VS+ R I++RD RFHHF +G CSC D+W
Sbjct: 541 CRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/532 (36%), Positives = 294/532 (55%), Gaps = 11/532 (2%)
Query: 114 GRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFS 171
G++D+A ++F+ + P ++V W M G +N S EAL ++++ML ++ + F+
Sbjct: 173 GKVDDALKLFK---QMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFT 229
Query: 172 VALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR 231
+ AC + +G +H + K ++ V+ +L+ FY C GD +VF+
Sbjct: 230 CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE 289
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
V W L++G+S K + L F M L+ + + T + L C+ L L GKE+
Sbjct: 290 QVAVWTALLSGYSLNKKHEDALSIFSGM-LRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQI 351
HG VK G + D + N+L+ MY+ G++ VF + K + SWN+++ G + +G+
Sbjct: 349 HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRG 408
Query: 352 EKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD--YGVQPSLEHYA 409
+ A +F +MIR N PD ITF LLS CSH G +G+K F M + ++HY
Sbjct: 409 KWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYT 468
Query: 410 CLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPN 469
C+VDILGR GKL EA + M +K + +W +LL++CR+ +V E AA +F ++
Sbjct: 469 CMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSK 528
Query: 470 NAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFR 529
++ YV+LSNIYA AG W V ++R M GI K G SW+ I+ + H F +G
Sbjct: 529 SSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCS 588
Query: 530 SSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAG 589
E L+ L +K+ GY P+ LHD+ +E K + HSERLA F LI+T G
Sbjct: 589 RIYEKLEF---LREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEG 645
Query: 590 MPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+ + KNLRVC DCH+ +K +S V R IVLRD RFHHF+NGTCSC D+W
Sbjct: 646 SAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 166/382 (43%), Gaps = 61/382 (15%)
Query: 73 CISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPE 132
C + + G ++H ++ K + + + LIT Y+ C R+ ++R+VF DE+
Sbjct: 235 CANAPAFHMGIQVHGLII--KLGFLYEEYVSASLITFYANCKRIGDSRKVF-DEKVHEQV 291
Query: 133 SVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQ 192
+VW A+ GYS N+ ++AL ++ ML S+ P F+ L +C+ +G G+ +H
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 193 LAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFET 252
K E D V N+L+ Y + G D + VF + ++++VSWN++I G
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVG---------- 401
Query: 253 LDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMD 312
CAQ I GQ+++ K+ D L+
Sbjct: 402 --------------------------CAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Query: 313 MYAKCGSIGYCKKVFDGMES------KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI 366
+ CG + +K+F M S + + + M+ G++++A +L + M+ +
Sbjct: 436 ACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV---V 492
Query: 367 RPDGITFVSLLSGCSHSGLTSEGQK----FFNLMQDYGVQPSLEHYACLVDILGRSGKLD 422
+P+ + +++LLS C G+K FNL S Y L +I +G+
Sbjct: 493 KPNEMVWLALLSACRMHSDVDRGEKAAAAIFNL-----DSKSSAAYVLLSNIYASAGRWS 547
Query: 423 EA----LTVARNMPMKLSGSIW 440
+ + +N MK GS W
Sbjct: 548 NVSKLRVKMKKNGIMKKPGSSW 569
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 144/367 (39%), Gaps = 85/367 (23%)
Query: 88 HLLHSKGRVIENPTLKSK----LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYS 143
H++H K + T++ + LI + + R+DEAR VF ++ P S++ M GY+
Sbjct: 19 HVIHGKCYRSFSVTVEFQNREVLICNHLLSRRIDEAREVF-NQVPSPHVSLYTKMITGYT 77
Query: 144 RNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQV 203
R+ +AL ++ +M R D V
Sbjct: 78 RSNRLVDALNLFDEMPVR---------------------------------------DVV 98
Query: 204 VNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE 263
N+++ VECG +++F+ MP+R+VVSW ++ G GKV + F M +K
Sbjct: 99 SWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK- 157
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYC 323
D N+++ Y + G +
Sbjct: 158 ---------------------------------------DTAAWNSMVHGYLQFGKVDDA 178
Query: 324 KKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHS 383
K+F M K++ SW TM+ G N + +A+DLF M+R I+ F +++ C+++
Sbjct: 179 LKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
Query: 384 GLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSL 443
G + L+ G A L+ ++ ++ V + + ++W +L
Sbjct: 239 PAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVF-DEKVHEQVAVWTAL 297
Query: 444 LNSCRLD 450
L+ L+
Sbjct: 298 LSGYSLN 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 80/150 (53%), Gaps = 15/150 (10%)
Query: 320 IGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM-IRSNIRPDGITFVSLLS 378
I ++VF+ + S ++ + M+ GY+ + ++ A++LFDEM +R D +++ S++S
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR-----DVVSWNSMIS 105
Query: 379 GCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGS 438
GC G + K F+ M + S+ + +V+ RSGK+D+A + MP+K + +
Sbjct: 106 GCVECGDMNTAVKLFDEMP----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAA 161
Query: 439 IWGSLLNSCRLDGNVSLAETAAERLFEIEP 468
W S+++ G V A +LF+ P
Sbjct: 162 -WNSMVHGYLQFGKVD----DALKLFKQMP 186
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 202/565 (35%), Positives = 316/565 (55%), Gaps = 15/565 (2%)
Query: 88 HLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRL 147
H G ++ + +T YS G L EA VF +E E W +M + Y +++
Sbjct: 161 HCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKE 220
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNA 207
+AL +Y++M+ + + F + L A T + GR H +L K + V +
Sbjct: 221 GAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSG 280
Query: 208 LLRFYVECG-CSG--DVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFE-TLDAFRAMQLKE 263
L+ FY +CG C G D +VF+ + ++V WNT+I+G+S ++ E + +FR MQ +
Sbjct: 281 LIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQ-RI 339
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADR-PLLNALMDMYAKCGSIGY 322
G + V C+ L++ K+IHG +KS ++R + NAL+ +Y K G++
Sbjct: 340 GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQD 399
Query: 323 CKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSH 382
+ VFD M + S+N M+ GY+ +G +A+ L+ M+ S I P+ ITFV++LS C+H
Sbjct: 400 ARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAH 459
Query: 383 SGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWG 441
G EGQ++FN M++ + ++P EHY+C++D+LGR+GKL+EA MP K W
Sbjct: 460 CGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWA 519
Query: 442 SLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRG 501
+LL +CR N++LAE AA L ++P A YVML+N+YADA WE + VR+ M +
Sbjct: 520 ALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKR 579
Query: 502 IKKDAGCSWIQIKQRIHTFVAGGSSD--FRSSAEYLKIWNALSNAIKDSGYIPNTD---V 556
I+K GCSWI++K++ H FVA S R EYL+ + +K GY+ + V
Sbjct: 580 IRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLE---EMMKKMKKVGYVMDKKWAMV 636
Query: 557 VLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTR 616
+ E + M + HSE+LA F L+ T G + + KNLR+C DCH+ +K +S V
Sbjct: 637 KEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAG 696
Query: 617 RLIVLRDTNRFHHFENGTCSCMDHW 641
R I++RD RFH F++G CSC D+W
Sbjct: 697 REIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 209/460 (45%), Gaps = 44/460 (9%)
Query: 57 NPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRL 116
N TP++ + LL ++ + L G+ LH L+ K V + L + + LYS CGRL
Sbjct: 2 NQTPWKFKTFRDLLLKSVAERDLFTGKSLHA--LYVKSIVASSTYLSNHFVNLYSKCGRL 59
Query: 117 DEARRVFQDEEE------------------------------DPPESVWVAMAIGYSRNR 146
AR F EE P + + GY+ R
Sbjct: 60 SYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADAR 119
Query: 147 LSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNN 206
+ A+++++ M E F S + AC D D + + +H ++ VNN
Sbjct: 120 ETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVD--LIKQLHCFSVSGGFDSYSSVNN 177
Query: 207 ALLRFYVECGCSGDVLRVFEVMPQ-RNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
A + +Y + G + + VF M + R+ VSWN++I + + + L ++ M K G
Sbjct: 178 AFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK-GF 236
Query: 266 GFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCG---SIGY 322
TL +VL L L G++ HG+++K+G + + + L+D Y+KCG +
Sbjct: 237 KIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD 296
Query: 323 CKKVFDGMESKDLTSWNTMLAGYSINGQI-EKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
+KVF + S DL WNTM++GYS+N ++ E+A+ F +M R RPD +FV + S CS
Sbjct: 297 SEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACS 356
Query: 382 HSGLTSEGQKFFNL-MQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIW 440
+ S+ ++ L ++ + + L+ + +SG L +A V MP +L+ +
Sbjct: 357 NLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSF 415
Query: 441 GSLLNSCRLDGNVSLAETAAERLFE--IEPNNAGNYVMLS 478
++ G+ + A +R+ + I PN +LS
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLS 455
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 204/614 (33%), Positives = 314/614 (51%), Gaps = 50/614 (8%)
Query: 69 LLHLCISRKSLE--HGQKLHQHLLHSKGRVIENPTLKSKLI-------TLYSVCGRLDEA 119
LL C S L+ HG L HL I + + S+L+ T L A
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHL-------ISDVFVASRLLALCVDDSTFNKPTNLLGYA 70
Query: 120 RRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTD 179
+F + ++P V+ + +S +A Y ML + P N F +KA ++
Sbjct: 71 YGIFS-QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 180 VGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTL 239
+ VG H+Q+ + + D V N+L+ Y CG R+F M R+VVSW ++
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 240 IAGFSGQGKV------------------------------FE-TLDAFRAMQLKEGMGFS 268
+AG+ G V FE +D F M+ +EG+ +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK-REGVVAN 248
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFD 328
+ +V+ CA L AL G+ + +VKS + L AL+DM+ +CG I VF+
Sbjct: 249 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE 308
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSE 388
G+ D SW++++ G +++G KA+ F +MI P +TF ++LS CSH GL +
Sbjct: 309 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEK 368
Query: 389 GQKFF-NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
G + + N+ +D+G++P LEHY C+VD+LGR+GKL EA M +K + I G+LL +C
Sbjct: 369 GLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGAC 428
Query: 448 RLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAG 507
++ N +AE L +++P ++G YV+LSNIYA AG W+ ++ +R+MM + +KK G
Sbjct: 429 KIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPG 488
Query: 508 CSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKV 567
S I+I +I+ F G + + W + I+ GY NT D++EE K
Sbjct: 489 WSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKE 548
Query: 568 MWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRF 627
+ HSE+LA + ++ T G IRI KNLRVC DCH+ K +S V R +++RD NRF
Sbjct: 549 SSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRF 608
Query: 628 HHFENGTCSCMDHW 641
HHF NG CSC D+W
Sbjct: 609 HHFRNGVCSCRDYW 622
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 340 bits (871), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/437 (38%), Positives = 265/437 (60%), Gaps = 5/437 (1%)
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
N ++ ++ G SG +V +NV++WN +I G+ + E L A + M +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 266 GFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKK 325
+ + + L CA+L LH K +H ++ SG + + L +AL+D+YAKCG IG ++
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 326 VFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGL 385
VF ++ D++ WN M+ G++ +G +AI +F EM ++ PD ITF+ LL+ CSH GL
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 386 TSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
EG+++F LM + + +QP LEHY +VD+LGR+G++ EA + +MP++ IW SLL
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 445 NSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKK 504
+S R N L E A + L +G+YV+LSNIY+ WE ++VRE+M+ GI+K
Sbjct: 342 SSSRTYKNPELGEIAIQNL---SKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Query: 505 DAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEE 564
G SW++ IH F AG +S + A Y K+ L K G++ +TD+VL D++EE
Sbjct: 399 AKGKSWLEFGGMIHRFKAGDTSHIETKAIY-KVLEGLIQKTKSQGFVSDTDLVLMDVSEE 457
Query: 565 MKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDT 624
K + HSE+LA + ++ + G IRI KN+R+C DCH+W+KAVS++ R+I++RD
Sbjct: 458 EKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDR 517
Query: 625 NRFHHFENGTCSCMDHW 641
RFH FE+G CSC D+W
Sbjct: 518 IRFHRFEDGLCSCRDYW 534
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 136/291 (46%), Gaps = 13/291 (4%)
Query: 119 ARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARS-VEPGNFAFSVALKAC 177
A++V ++ D W M GY RN +EAL ++ML+ + ++P F+F+ +L AC
Sbjct: 117 AKKVLRNAS-DQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAAC 175
Query: 178 TDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWN 237
+GD + +H+ + E + ++++AL+ Y +CG G VF + + +V WN
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 238 TLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVK 297
+I GF+ G E + F M+ E + IT +L C+ L GKE G +
Sbjct: 236 AMITGFATHGLATEAIRVFSEME-AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG--LM 292
Query: 298 SGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES----KDLTSWNTMLAGYSINGQIEK 353
S + + +P L M G G K+ ++ +ES D+ W ++L+ + + K
Sbjct: 293 SRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS----SSRTYK 348
Query: 354 AIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPS 404
+L + I++ + +V L + S + QK LM G++ +
Sbjct: 349 NPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKA 399
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR-SN 365
+N +++ K G G KKV +++ +WN M+ GY N Q E+A+ M+ ++
Sbjct: 101 INLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 366 IRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA- 424
I+P+ +F S L+ C+ G + +LM D G++ + + LVD+ + G + +
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 425 ---LTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNN 470
+V RN SIW +++ G LA A E+E +
Sbjct: 221 EVFYSVKRN-----DVSIWNAMITGFATHG---LATEAIRVFSEMEAEH 261
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 18/218 (8%)
Query: 34 NPTLKSLCKSGKLEEALRLIES--------PNPTPYQDEDISQLLHLCISRKSLEHGQKL 85
N + ++ + EEAL+ +++ PN + L C L H + +
Sbjct: 133 NLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASS-----LAACARLGDLHHAKWV 187
Query: 86 HQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRN 145
H ++ S + N L S L+ +Y+ CG + +R VF + + S+W AM G++ +
Sbjct: 188 HSLMIDSGIEL--NAILSSALVDVYAKCGDIGTSREVFYSVKRNDV-SIWNAMITGFATH 244
Query: 146 RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN 205
L+ EA+ V+ +M A V P + F L C+ G G+ +++R ++ +
Sbjct: 245 GLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEH 304
Query: 206 -NALLRFYVECGCSGDVLRVFEVMP-QRNVVSWNTLIA 241
A++ G + + E MP + +VV W +L++
Sbjct: 305 YGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 192/550 (34%), Positives = 304/550 (55%), Gaps = 17/550 (3%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLA-RSVE 164
L+ Y ++ AR++F DE +P W ++ GY+ + AL +++ M R V
Sbjct: 70 LVISYVKLKEINTARKLF-DEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVP 128
Query: 165 PGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRV 224
P + F+ KAC+ + +SR+G+ IHA+L + VV+++L+ Y +C RV
Sbjct: 129 PNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRV 188
Query: 225 FEVM--PQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQ--LKEGMGFSWITLTTVLPICA 280
F+ M RNVVSW ++I ++ + E ++ FR+ L ++ L +V+ C+
Sbjct: 189 FDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFM-LASVISACS 247
Query: 281 QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNT 340
L L GK HG + + G +++ + +L+DMYAKCGS+ +K+F + + S+ +
Sbjct: 248 SLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTS 307
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDY 399
M+ + +G E A+ LFDEM+ I P+ +T + +L CSHSGL +EG ++ +LM + Y
Sbjct: 308 MIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKY 367
Query: 400 GVQPSLEHYACLVDILGRSGKLDEALTVARNMPM--KLSGSIWGSLLNSCRLDGNVSLAE 457
GV P HY C+VD+LGR G++DEA +A+ + + + +WG+LL++ RL G V +
Sbjct: 368 GVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVS 427
Query: 458 TAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRI 517
A++RL + Y+ LSN YA +G WE + +R M G K+ CSWI+ K +
Sbjct: 428 EASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSV 487
Query: 518 HTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGY------IPNTDVVLHDINEEMKVMWVC 571
+ F AG S S E + L +K+ G+ I + V D++EE K V
Sbjct: 488 YVFHAGDLS-CDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVS 546
Query: 572 GHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFE 631
H ERLA + L+H AG IRI NLR+C DCH K +S + R IV+RD NRFH F+
Sbjct: 547 LHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFK 606
Query: 632 NGTCSCMDHW 641
NG+C+C D+W
Sbjct: 607 NGSCTCRDYW 616
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 4/237 (1%)
Query: 189 IHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGK 248
+H K +D N L+ YV+ ++F+ M + NVVSW ++I+G++ GK
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 249 VFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLN 308
L F+ M + + T +V C+ L GK IH ++ SG + + + +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 309 ALMDMYAKCGSIGYCKKVFDGM--ESKDLTSWNTMLAGYSINGQIEKAIDLFDEM--IRS 364
+L+DMY KC + ++VFD M +++ SW +M+ Y+ N + +AI+LF +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 365 NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKL 421
+ R + S++S CS G G+ L+ G + + L+D+ + G L
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSL 287
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 190/559 (33%), Positives = 304/559 (54%), Gaps = 49/559 (8%)
Query: 94 GRVIENPTLKS----------KLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYS 143
GR + TLK+ L+ +Y+ G+L A +VF EE P
Sbjct: 145 GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVF---EESP------------- 188
Query: 144 RNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQV 203
+R+ KE++L++ +V + D + + + +R+ +
Sbjct: 189 -DRIKKESILIW---------------NVLINGYCRAKDMHMATTLFRSMPERNSGS--- 229
Query: 204 VNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE 263
+ L++ YV+ G ++FE+MP++NVVSW TLI GFS G + + M L++
Sbjct: 230 -WSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM-LEK 287
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYC 323
G+ + T+ VL C++ AL SG IHG I+ +G K DR + AL+DMYAKCG +
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 324 KKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHS 383
VF M KD+ SW M+ G++++G+ +AI F +M+ S +PD + F+++L+ C +S
Sbjct: 348 ATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNS 407
Query: 384 GLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGS 442
G FF+ M+ DY ++P+L+HY +VD+LGR+GKL+EA + NMP+ + W +
Sbjct: 408 SEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAA 467
Query: 443 LLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGI 502
L +C+ AE+ ++ L E++P G+Y+ L +A G + V++ R + R
Sbjct: 468 LYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIK 527
Query: 503 KKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDIN 562
++ G S+I++ +++ F AG S + LK+ +S AI+ GY P D +HDI
Sbjct: 528 ERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQ-KGYNPGADWSIHDIE 586
Query: 563 EEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLR 622
EE K HSE+LA + T G IRI KNLR+C DCHS MK VS++++R I+LR
Sbjct: 587 EEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLR 646
Query: 623 DTNRFHHFENGTCSCMDHW 641
D +FHHF++G CSC D+W
Sbjct: 647 DARQFHHFKDGRCSCGDYW 665
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 134/344 (38%), Gaps = 79/344 (22%)
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGC--- 217
R P F + AC D R +HAQ+ +R V+++ + V C
Sbjct: 23 RQASPDESHFISLIHACKDTASLR---HVHAQILRRG-----VLSSRVAAQLVSCSSLLK 74
Query: 218 SGDV-LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL 276
S D L +F +RN N LI G + + ++ F M L+ G+ +T VL
Sbjct: 75 SPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILM-LRLGVKPDRLTFPFVL 133
Query: 277 PICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI---------------- 320
++L G+ +H +K+ D + +L+DMYAK G +
Sbjct: 134 KSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKK 193
Query: 321 -----------GYCK--------KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFD-- 359
GYC+ +F M ++ SW+T++ GY +G++ +A LF+
Sbjct: 194 ESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELM 253
Query: 360 -----------------------------EMIRSNIRPDGITFVSLLSGCSHSGLTSEGQ 390
EM+ ++P+ T ++LS CS SG G
Sbjct: 254 PEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGI 313
Query: 391 KFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
+ + D G++ LVD+ + G+LD A TV NM K
Sbjct: 314 RIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK 357
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 9/220 (4%)
Query: 287 SGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYS 346
S + +H QI++ G + R + L+ + S Y +F E ++ N ++ G +
Sbjct: 44 SLRHVHAQILRRGVLSSR-VAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLT 102
Query: 347 INGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLE 406
N + E ++ F M+R ++PD +TF +L S G G+ V
Sbjct: 103 ENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSF 162
Query: 407 HYACLVDILGRSGKLDEALTVARNMPMKLSGS---IWGSLLNSCRLDGNVSLAETAAERL 463
LVD+ ++G+L A V P ++ IW L+N ++ +A T L
Sbjct: 163 VRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATT----L 218
Query: 464 FEIEPN-NAGNYVMLSNIYADAGMWEGVKRVREMMAIRGI 502
F P N+G++ L Y D+G K++ E+M + +
Sbjct: 219 FRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNV 258
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 193/580 (33%), Positives = 314/580 (54%), Gaps = 21/580 (3%)
Query: 70 LHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED 129
L C S + G+++H H + S+ + + S ++ +YS G + A R+F +
Sbjct: 238 LGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTS-ILDMYSKYGEVSYAERIFNGMIQR 296
Query: 130 PPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAI 189
+ W M Y+RN +A L ++ M ++ + S+ L + + + GR I
Sbjct: 297 NIVA-WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE---GRTI 352
Query: 190 HAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKV 249
H +R V+ AL+ Y ECG +F+ M ++NV+SWN++IA + GK
Sbjct: 353 HGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKN 412
Query: 250 FETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNA 309
+ L+ F+ + + S T+ ++LP A+ +L G+EIH IVKS ++ +LN+
Sbjct: 413 YSALELFQELWDSSLVPDS-TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNS 471
Query: 310 LMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPD 369
L+ MYA CG + +K F+ + KD+ SWN+++ Y+++G ++ LF EMI S + P+
Sbjct: 472 LVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPN 531
Query: 370 GITFVSLLSGCSHSGLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVA 428
TF SLL+ CS SG+ EG ++F M+ +YG+ P +EHY C++D++GR+G A
Sbjct: 532 KSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFL 591
Query: 429 RNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWE 488
MP + IWGSLLN+ R ++++AE AAE++F++E +N G YV+L N+YA+AG WE
Sbjct: 592 EEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWE 651
Query: 489 GVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDS 548
V R++ +M +GI + + S ++ K + H F G RS KI+ L S
Sbjct: 652 DVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGD----RSHVATNKIYEVLDVV---S 704
Query: 549 GYIPNTDVVLHDINEEMKVMWVCG-------HSERLAAVFALIHTGAGMPIRITKNLRVC 601
+ D+ +H ++ V HS RLA F LI T G + + N R+C
Sbjct: 705 RMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRIC 764
Query: 602 VDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
CH +++ SR+TRR IV+ D+ FHHF NG CSC ++W
Sbjct: 765 RKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 171/331 (51%), Gaps = 9/331 (2%)
Query: 116 LDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALK 175
+++A ++F DE +W M G++ L EA+ Y M+ V+ F + +K
Sbjct: 80 MEDALQLF-DEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIK 138
Query: 176 ACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVS 235
+ + G+ IHA + K +D V N+L+ Y++ GC+ D +VFE MP+R++VS
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVS 198
Query: 236 WNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI 295
WN++I+G+ G F +L F+ M LK G + + L C+ + + GKEIH
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEM-LKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHA 257
Query: 296 VKSG-KKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKA 354
V+S + D ++ +++DMY+K G + Y +++F+GM +++ +WN M+ Y+ NG++ A
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 355 IDLFDEMIRSN-IRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVD 413
F +M N ++PD IT ++LL + EG+ G P + L+D
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALID 373
Query: 414 ILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
+ G G+L A + M K S W S++
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVIS-WNSII 403
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 4/204 (1%)
Query: 182 DSRVGRAIHAQLAKRDEEADQVVNNAL---LRFYVECGCSGDVLRVFEVMPQRNVVSWNT 238
DS + + L R + QV + AL LR + + D L++F+ M + + WN
Sbjct: 41 DSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNV 100
Query: 239 LIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKS 298
+I GF+ G E + + M G+ T V+ A +++L GK+IH ++K
Sbjct: 101 MIKGFTSCGLYIEAVQFYSRMVFA-GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKL 159
Query: 299 GKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLF 358
G +D + N+L+ +Y K G +KVF+ M +D+ SWN+M++GY G ++ LF
Sbjct: 160 GFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLF 219
Query: 359 DEMIRSNIRPDGITFVSLLSGCSH 382
EM++ +PD + +S L CSH
Sbjct: 220 KEMLKCGFKPDRFSTMSALGACSH 243
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/462 (37%), Positives = 267/462 (57%), Gaps = 35/462 (7%)
Query: 98 ENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRD 157
++ + +K++ +D A R+F ++ +P ++ ++ Y+ N L + + +Y+
Sbjct: 40 QSSFMVTKMVDFCDKIEDMDYATRLF-NQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQ 98
Query: 158 MLARSVE-PGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECG 216
+L +S E P F F K+C +G +G+ +H L K V NAL+ Y++
Sbjct: 99 LLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFD 158
Query: 217 CSGDVLRVFEVMPQRNVVSWNTL-------------------------------IAGFSG 245
D +VF+ M +R+V+SWN+L I+G++G
Sbjct: 159 DLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTG 218
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
G E +D FR MQL G+ I+L +VLP CAQL +L GK IH + G
Sbjct: 219 IGCYVEAMDFFREMQLA-GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTG 277
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
+ NAL++MY+KCG I ++F ME KD+ SW+TM++GY+ +G AI+ F+EM R+
Sbjct: 278 VCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAK 337
Query: 366 IRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEA 424
++P+GITF+ LLS CSH G+ EG ++F++M QDY ++P +EHY CL+D+L R+GKL+ A
Sbjct: 338 VKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERA 397
Query: 425 LTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADA 484
+ + + MPMK IWGSLL+SCR GN+ +A A + L E+EP + GNYV+L+NIYAD
Sbjct: 398 VEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADL 457
Query: 485 GMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSS 526
G WE V R+R+M+ +KK G S I++ + FV+G +S
Sbjct: 458 GKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/579 (30%), Positives = 324/579 (55%), Gaps = 12/579 (2%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
L+ CI KS+ ++++ ++ S G E + ++++ ++ CG + +ARR+F +E
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMM-SNGFEPEQYMM-NRILLMHVKCGMIIDARRLF---DE 183
Query: 129 DPPESVWVAMAI--GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVG 186
P +++ +I G+ EA +++ M + F+V L+A +G VG
Sbjct: 184 IPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQ 246
+ +H K + V+ L+ Y +CG D FE MP++ V+WN +IAG++
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 247 GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPL 306
G E L M+ G+ TL+ ++ I +L L K+ H ++++G +++
Sbjct: 304 GYSEEALCLLYDMR-DSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI 366
AL+D Y+K G + + VFD + K++ SWN ++ GY+ +G+ A+ LF++MI +N+
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Query: 367 RPDGITFVSLLSGCSHSGLTSEG-QKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEAL 425
P+ +TF+++LS C++SGL+ +G + F ++ + +G++P HYAC++++LGR G LDEA+
Sbjct: 423 APNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAI 482
Query: 426 TVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAG 485
R P+K + ++W +LLN+CR+ N+ L AE+L+ + P GNYV++ N+Y G
Sbjct: 483 AFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMG 542
Query: 486 MWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIW---NALS 542
V E + +G+ C+W+++ + H+F++G D + +I+ + L
Sbjct: 543 KTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELM 602
Query: 543 NAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCV 602
I + GY +L D++E+ + HSE+LA + L++T P++IT+N R+C
Sbjct: 603 EEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICK 662
Query: 603 DCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+CH ++ +S VT R +V+RD +RFHHF+ G CSC +W
Sbjct: 663 NCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 177/370 (47%), Gaps = 16/370 (4%)
Query: 145 NRLSKEALLVYRDMLAR-SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQV 203
NR +EA ++ + R S + G + ++AC + R + ++ + E +Q
Sbjct: 101 NRF-REAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQY 159
Query: 204 VNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE 263
+ N +L +V+CG D R+F+ +P+RN+ S+ ++I+GF G E + F+ M +E
Sbjct: 160 MMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFK-MMWEE 218
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYC 323
T +L A L +++ GK++H +K G + + L+DMY+KCG I
Sbjct: 219 LSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDA 278
Query: 324 KKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSH- 382
+ F+ M K +WN ++AGY+++G E+A+ L +M S + D T ++ +
Sbjct: 279 RCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKL 338
Query: 383 SGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGS 442
+ L Q +L+++ G + + LVD + G++D A V +P K S W +
Sbjct: 339 AKLELTKQAHASLIRN-GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIIS-WNA 396
Query: 443 LLNSCRLDGNVSLAETAAERLFE--IEPNNAGNYVMLSNIY---ADAGMWE-GVKRVREM 496
L+ G T A +LFE I N A N+V + A +G+ E G + M
Sbjct: 397 LMGGYANHGR----GTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSM 452
Query: 497 MAIRGIKKDA 506
+ GIK A
Sbjct: 453 SEVHGIKPRA 462
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/589 (32%), Positives = 319/589 (54%), Gaps = 26/589 (4%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVC--GRLDEARRVF 123
+ ++ C+S + ++L H L + ++ L+S+L+ ++ G L A ++F
Sbjct: 6 METMIQKCVSFSQI---KQLQSHFLTAGH--FQSSFLRSRLLERCAISPFGDLSFAVQIF 60
Query: 124 QDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARS------VEPGNFAFSVALKAC 177
+ + P + W A+ G++ + A YR ML +S S LKAC
Sbjct: 61 RYIPK-PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKAC 119
Query: 178 TDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWN 237
S +H Q+ +R AD ++ LL Y + G ++F+ MP R+V SWN
Sbjct: 120 ARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWN 179
Query: 238 TLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVK 297
LIAG + E ++ ++ M+ EG+ S +T+ L C+ L + G+ I
Sbjct: 180 ALIAGLVSGNRASEAMELYKRME-TEGIRRSEVTVVAALGACSHLGDVKEGENIF----- 233
Query: 298 SGKKADRPLL-NALMDMYAKCGSIGYCKKVFDGME-SKDLTSWNTMLAGYSINGQIEKAI 355
G D ++ NA +DMY+KCG + +VF+ K + +WNTM+ G++++G+ +A+
Sbjct: 234 HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRAL 293
Query: 356 DLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDIL 415
++FD++ + I+PD +++++ L+ C H+GL G FN M GV+ +++HY C+VD+L
Sbjct: 294 EIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLL 353
Query: 416 GRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYV 475
R+G+L EA + +M M +W SLL + + +V +AE A+ + E+ NN G++V
Sbjct: 354 SRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFV 413
Query: 476 MLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYL 535
+LSN+YA G W+ V RVR+ M + +KK G S+I+ K IH F S + Y
Sbjct: 414 LLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYE 473
Query: 536 KIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAG---MPI 592
KI + + I++ GY+ T +VLHDI EE K +C HSE+LA + L+ P+
Sbjct: 474 KI-DEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPV 532
Query: 593 RITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
R+ NLR+C DCH K +S++ +R I++RD RFH F++G+CSC D W
Sbjct: 533 RVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 286/537 (53%), Gaps = 45/537 (8%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPY--QDEDISQLLHLCISRKSLEHGQKLHQHLLH 91
N + + + EEAL + + + + +L C + G ++H L
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHS--LI 178
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
+K + + + S L+ +YS CG +++A+RVF DE D W ++ + +N + EA
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF-DEMGDRNVVSWNSLITCFEQNGPAVEA 237
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDE-EADQVVNNALLR 210
L V++ ML VEP + + AC + +VG+ +H ++ K D+ D +++NA +
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 211 FYVECGCSGDVLRVFEVMP-------------------------------QRNVVSWNTL 239
Y +C + +F+ MP +RNVVSWN L
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 240 IAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVK-- 297
IAG++ G+ E L F ++ +E + + + +L CA L LH G + H ++K
Sbjct: 358 IAGYTQNGENEEALSLFCLLK-RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416
Query: 298 ----SGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEK 353
SG++ D + N+L+DMY KCG + VF M +D SWN M+ G++ NG +
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476
Query: 354 AIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLV 412
A++LF EM+ S +PD IT + +LS C H+G EG+ +F+ M +D+GV P +HY C+V
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 536
Query: 413 DILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAG 472
D+LGR+G L+EA ++ MPM+ IWGSLL +C++ N++L + AE+L E+EP+N+G
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSG 596
Query: 473 NYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFR 529
YV+LSN+YA+ G WE V VR+ M G+ K GCSWI+I+ H F+ S R
Sbjct: 597 PYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPR 653
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 196/390 (50%), Gaps = 42/390 (10%)
Query: 66 ISQLLHLCI-SRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQ 124
++LL CI S+ S + + +H ++ K ++++LI YS CG L++ R+VF
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVI--KSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79
Query: 125 D----------------------EEEDP-----PES---VWVAMAIGYSRNRLSKEALLV 154
+E D PE W +M G++++ +EAL
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 155 YRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVE 214
+ M ++F+ L AC+ + D G +H+ +AK +D + +AL+ Y +
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 215 CGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
CG D RVF+ M RNVVSWN+LI F G E LD F+ M L+ + +TL +
Sbjct: 200 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ-MMLESRVEPDEVTLAS 258
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGK-KADRPLLNALMDMYAKCGSIGYCKKVFDGMESK 333
V+ CA L+A+ G+E+HG++VK+ K + D L NA +DMYAKC I + +FD M +
Sbjct: 259 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
++ + +M++GY++ + A +F +M N+ +++ +L++G + +G E F
Sbjct: 319 NVIAETSMISGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQNGENEEALSLF 374
Query: 394 NLMQDYGVQPSLEHYACLVDILGRSGKLDE 423
L++ V P+ HY+ +IL L E
Sbjct: 375 CLLKRESVCPT--HYS-FANILKACADLAE 401
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 37/308 (12%)
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQ 246
R +HA + K + + N L+ Y +CG D +VF+ MPQRN+ +WN+++ G +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 247 GKVFETLDAFR------------------------------AMQLKEGMGFSWITLTTVL 276
G + E FR AM KEG + + +VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 277 PICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT 336
C+ L ++ G ++H I KS +D + +AL+DMY+KCG++ ++VFD M +++
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 337 SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFN-L 395
SWN+++ + NG +A+D+F M+ S + PD +T S++S C+ GQ+ +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 396 MQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSL 455
+++ ++ + VD+ + ++ EA + +MP++ + + + G
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR------NVIAETSMISGYAMA 333
Query: 456 AETAAERL 463
A T A RL
Sbjct: 334 ASTKAARL 341
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 261/442 (59%), Gaps = 10/442 (2%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESV-WVAMAIGYSRNRLSKEALLVYRDMLARS 162
S L+T YS +++A++VF DE D +SV W A+ GYS+ ++ALLV+ M
Sbjct: 199 SGLVTSYSKFMSVEDAQKVF-DELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEG 257
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL 222
V + L A T GD GR+IH K +D VV+NAL+ Y + +
Sbjct: 258 VGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEAN 317
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL 282
+FE M +R++ +WN+++ G TL F M L G+ +TLTTVLP C +L
Sbjct: 318 SIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERM-LCSGIRPDIVTLTTVLPTCGRL 376
Query: 283 TALHSGKEIHGQIVKSG----KKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSW 338
+L G+EIHG ++ SG K ++ + N+LMDMY KCG + + VFD M KD SW
Sbjct: 377 ASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASW 436
Query: 339 NTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD 398
N M+ GY + E A+D+F M R+ ++PD ITFV LL CSHSG +EG+ F M+
Sbjct: 437 NIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMET 496
Query: 399 -YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAE 457
Y + P+ +HYAC++D+LGR+ KL+EA +A + P+ + +W S+L+SCRL GN LA
Sbjct: 497 VYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLAL 556
Query: 458 TAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRI 517
A +RL E+EP + G YV++SN+Y +AG +E V VR+ M + +KK GCSWI +K +
Sbjct: 557 VAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGV 616
Query: 518 HTFVAGGSS--DFRSSAEYLKI 537
HTF G + +F+S ++L +
Sbjct: 617 HTFFTGNQTHPEFKSIHDWLSL 638
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 208/425 (48%), Gaps = 23/425 (5%)
Query: 29 KPPPLNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQ---LLHLCISRKSLEHGQKL 85
KP +L S SG++EE NP Y+ +++ L C RK GQ++
Sbjct: 32 KPSSALASLYSTV-SGQIEE--------NPKRYEHHNVATCIATLQRCAQRKDYVSGQQI 82
Query: 86 HQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRN 145
H ++ KG + ++P + L+ +Y+ CG + A VF E D + A+ G+ N
Sbjct: 83 HGFMVR-KGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSERDVFG--YNALISGFVVN 139
Query: 146 RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN 205
+A+ YR+M A + P + F LK + S V + +H K ++D V
Sbjct: 140 GSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCYVG 198
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQR-NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEG 264
+ L+ Y + D +VF+ +P R + V WN L+ G+S + + L F M+ +EG
Sbjct: 199 SGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMR-EEG 257
Query: 265 MGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
+G S T+T+VL + +G+ IHG VK+G +D + NAL+DMY K +
Sbjct: 258 VGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEAN 317
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
+F+ M+ +DL +WN++L + G + + LF+ M+ S IRPD +T ++L C
Sbjct: 318 SIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLA 377
Query: 385 LTSEGQKFFNLMQDYGV---QPSLEH-YACLVDILGRSGKLDEALTVARNMPMKLSGSIW 440
+G++ M G+ + S E + L+D+ + G L +A V +M +K S S W
Sbjct: 378 SLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSAS-W 436
Query: 441 GSLLN 445
++N
Sbjct: 437 NIMIN 441
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/521 (35%), Positives = 277/521 (53%), Gaps = 13/521 (2%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQ--HLLH 91
N L C+SG ++A L + ++ + I S E KL + H +
Sbjct: 122 NAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMT--LIQSASFEKSLKLLEAMHAVG 179
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD-EEEDPPESVWVAMAIGYSRNRLSKE 150
+ V T+ + I+ Y CG LD A+ VF+ + D W +M YS + +
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD 239
Query: 151 ALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLR 210
A +Y ML +P F +C + GR IH+ + D N +
Sbjct: 240 AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFIS 299
Query: 211 FYV--ECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS 268
Y E CS +L F++M R VSW +I+G++ +G + E L F AM +K G
Sbjct: 300 MYSKSEDTCSARLL--FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM-IKSGEKPD 356
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL-NALMDMYAKCGSIGYCKKVF 327
+TL +++ C + +L +GK I + G K D ++ NAL+DMY+KCGSI + +F
Sbjct: 357 LVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF 416
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
D K + +W TM+AGY++NG +A+ LF +MI + +P+ ITF+++L C+HSG
Sbjct: 417 DNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLE 476
Query: 388 EGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
+G ++F++M Q Y + P L+HY+C+VD+LGR GKL+EAL + RNM K IWG+LLN+
Sbjct: 477 KGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
Query: 447 CRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
C++ NV +AE AAE LF +EP A YV ++NIYA AGMW+G R+R +M R IKK
Sbjct: 537 CKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYP 596
Query: 507 GCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKD 547
G S IQ+ + H+F G + Y + N LS KD
Sbjct: 597 GESVIQVNGKNHSFTVGEHGHVENEVIYFTL-NGLSLFAKD 636
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 170/372 (45%), Gaps = 8/372 (2%)
Query: 83 QKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGY 142
+ +H HL+ K + + + + ++ C +D A +VF+ E + W AM G+
Sbjct: 72 EMVHAHLI--KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDA-TTWNAMLSGF 128
Query: 143 SRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQ 202
++ + +A ++R+M + P + +++ + ++ A+HA + +
Sbjct: 129 CQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV 188
Query: 203 VVNNALLRFYVECGCSGDVLRVFEVMPQ--RNVVSWNTLIAGFSGQGKVFETLDAFRAMQ 260
V N + Y +CG VFE + + R VVSWN++ +S G+ F+ + +
Sbjct: 189 TVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY-CLM 247
Query: 261 LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI 320
L+E T + C L G+ IH + G D +N + MY+K
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 321 GYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGC 380
+ +FD M S+ SW M++GY+ G +++A+ LF MI+S +PD +T +SL+SGC
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 381 SHSGLTSEGQKFFNLMQDYGVQ-PSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSI 439
G G+ YG + ++ L+D+ + G + EA + N P K +
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK-TVVT 426
Query: 440 WGSLLNSCRLDG 451
W +++ L+G
Sbjct: 427 WTTMIAGYALNG 438
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 3/271 (1%)
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
E+LL++R+M EP NF F KAC + D +HA L K +D V A +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 210 RFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSW 269
+V+C +VFE MP+R+ +WN +++GF G + FR M+L E S
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS- 153
Query: 270 ITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDG 329
+T+ T++ + +L + +H ++ G + N + Y KCG + K VF+
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 330 MESKDLT--SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
++ D T SWN+M YS+ G+ A L+ M+R +PD TF++L + C + +
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLT 273
Query: 388 EGQKFFNLMQDYGVQPSLEHYACLVDILGRS 418
+G+ + G +E + + +S
Sbjct: 274 QGRLIHSHAIHLGTDQDIEAINTFISMYSKS 304
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL 282
R++ + +V +WN I + E+L FR M+ + G + T V CA+L
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMK-RGGFEPNNFTFPFVAKACARL 65
Query: 283 TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTML 342
+ + +H ++KS +D + A +DM+ KC S+ Y KVF+ M +D T+WN ML
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 343 AGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQ 402
+G+ +G +KA LF EM + I PD +T ++L+ S + K M G++
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF----EKSLKLLEAMHAVGIR 181
Query: 403 PSLEHYACL----VDILGRSGKLDEALTV 427
++ + + G+ G LD A V
Sbjct: 182 LGVDVQVTVANTWISTYGKCGDLDSAKLV 210
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 292/530 (55%), Gaps = 9/530 (1%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDI--SQLLHLCISRKSLEHGQKLHQHLLH 91
N + +SG +EE+L + + I S LL ++LE+ +++H +++
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM- 367
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
+ + + L S LI Y C + A+ +F + V+ AM GY N L ++
Sbjct: 368 -RHSISLDIFLTSALIDAYFKCRGVSMAQNIFS-QCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
L ++R ++ + P L + ++GR +H + K+ + + A++
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 485
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
Y +CG +FE + +R++VSWN++I + +D FR M + G+ + ++
Sbjct: 486 YAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV-SGICYDCVS 544
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME 331
++ L CA L + GK IHG ++K +D + L+DMYAKCG++ VF M+
Sbjct: 545 ISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK 604
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMI-RSNIRPDGITFVSLLSGCSHSGLTSEGQ 390
K++ SWN+++A +G+++ ++ LF EM+ +S IRPD ITF+ ++S C H G EG
Sbjct: 605 EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGV 664
Query: 391 KFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRL 449
+FF M +DYG+QP EHYAC+VD+ GR+G+L EA ++MP +WG+LL +CRL
Sbjct: 665 RFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRL 724
Query: 450 DGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCS 509
NV LAE A+ +L +++P+N+G YV++SN +A+A WE V +VR +M R ++K G S
Sbjct: 725 HKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYS 784
Query: 510 WIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLH 559
WI+I +R H FV+G + SS Y + N+L ++ GYIP + LH
Sbjct: 785 WIEINKRTHLFVSGDVNHPESSHIY-SLLNSLLGELRLEGYIPQPYLPLH 833
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 187/393 (47%), Gaps = 22/393 (5%)
Query: 31 PPLNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLL 90
P + P KSL L + R +E P +S LL C + L G+++H L+
Sbjct: 12 PAIAPYKKSL----PLRNSSRFLEETIP-----RRLSLLLQACSNPNLLRQGKQVHAFLI 62
Query: 91 HSKGRVIENPTLKSKLITLYSVCGRLDEARRVF-QDEEEDPPESVWVAMAIGYSRNRLSK 149
+ + + +++ +Y++CG + ++F + + W ++ + RN L
Sbjct: 63 VNS--ISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLN 120
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
+AL Y ML V P F +KAC + + + + ++ + ++ V ++L+
Sbjct: 121 QALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLI 180
Query: 210 RFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSW 269
+ Y+E G ++F+ + Q++ V WN ++ G++ G + + F M++ + + +
Sbjct: 181 KAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ-ISPNA 239
Query: 270 ITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDG 329
+T VL +CA + G ++HG +V SG + + N+L+ MY+KCG K+F
Sbjct: 240 VTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRM 299
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG 389
M D +WN M++GY +G +E+++ F EMI S + PD ITF SLL S
Sbjct: 300 MSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS-------- 351
Query: 390 QKFFNLMQDYGVQPSLEHYACLVDILGRSGKLD 422
KF NL + + ++ +DI S +D
Sbjct: 352 -KFENLEYCKQIHCYIMRHSISLDIFLTSALID 383
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 268/445 (60%), Gaps = 12/445 (2%)
Query: 62 QDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARR 121
+ E + LL C S ++++HG ++H HL+ + N + SKL+ LY+ CG + A
Sbjct: 91 EPEIFASLLETCYSLRAIDHGVRVH-HLI-PPYLLRNNLGISSKLVRLYASCGYAEVAHE 148
Query: 122 VFQD-EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDV 180
VF + D W ++ GY+ ++A+ +Y M V+P F F LKAC +
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 181 GDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLI 240
G ++G AIH L K D V NAL+ Y +CG VF+++P ++ VSWN+++
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSML 268
Query: 241 AGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGK 300
G+ G + E LD FR M ++ G+ + +++VL A++ + G+++HG +++ G
Sbjct: 269 TGYLHHGLLHEALDIFRLM-VQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGM 324
Query: 301 KADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDE 360
+ + + NAL+ +Y+K G +G +FD M +D SWN +++ +S N + F++
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQ 381
Query: 361 MIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSG 419
M R+N +PDGITFVS+LS C+++G+ +G++ F+LM ++YG+ P +EHYAC+V++ GR+G
Sbjct: 382 MHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAG 441
Query: 420 KLDEALT-VARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLS 478
++EA + + + M ++ ++WG+LL +C L GN + E AA+RLFE+EP+N N+ +L
Sbjct: 442 MMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLI 501
Query: 479 NIYADAGMWEGVKRVREMMAIRGIK 503
IY+ A E V+RVR+MM RG++
Sbjct: 502 RIYSKAKRAEDVERVRQMMVDRGLE 526
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/485 (35%), Positives = 267/485 (55%), Gaps = 8/485 (1%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
+S ++ C +G+ +H L K + T++S L+TLYS CG +A VF+
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELF--KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS 433
Query: 126 EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR--SVEPGNFAFSVALKACTDVGDS 183
EE + W ++ G +N KEAL V+ DM S++P + + AC +
Sbjct: 434 MEEKDMVA-WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEAL 492
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
R G +H + K + V ++L+ Y +CG L+VF M N+V+WN++I+ +
Sbjct: 493 RFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCY 552
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKAD 303
S ++D F M L +G+ +++T+VL + +L GK +HG ++ G +D
Sbjct: 553 SRNNLPELSIDLFNLM-LSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSD 611
Query: 304 RPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR 363
L NAL+DMY KCG Y + +F M+ K L +WN M+ GY +G A+ LFDEM +
Sbjct: 612 THLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKK 671
Query: 364 SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLD 422
+ PD +TF+SL+S C+HSG EG+ F M QDYG++P++EHYA +VD+LGR+G L+
Sbjct: 672 AGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLE 731
Query: 423 EALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYA 482
EA + + MP++ SIW LL++ R NV L +AE+L +EP YV L N+Y
Sbjct: 732 EAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYM 791
Query: 483 DAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALS 542
+AG+ ++ +M +G+ K GCSWI++ R + F +GGSS AE + N L
Sbjct: 792 EAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSS-PMKAEIFNVLNRLK 850
Query: 543 NAIKD 547
+ + D
Sbjct: 851 SNMVD 855
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 198/395 (50%), Gaps = 6/395 (1%)
Query: 43 SGKLEEALRL--IESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENP 100
SG E +L L + N + L C ++ G+++H ++ K + +P
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV--KMGLHNDP 307
Query: 101 TLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
+ + L+++YS CG + EA VF + E +W AM Y+ N AL ++ M
Sbjct: 308 YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLE-IWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
+SV P +F S + C+ +G G+++HA+L KR ++ + +ALL Y +CGC D
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPD 426
Query: 221 VLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQ-LKEGMGFSWITLTTVLPIC 279
VF+ M ++++V+W +LI+G GK E L F M+ + + +T+V C
Sbjct: 427 AYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC 486
Query: 280 AQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWN 339
A L AL G ++HG ++K+G + + ++L+D+Y+KCG KVF M ++++ +WN
Sbjct: 487 AGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWN 546
Query: 340 TMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDY 399
+M++ YS N E +IDLF+ M+ I PD ++ S+L S + +G+
Sbjct: 547 SMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRL 606
Query: 400 GVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
G+ L+D+ + G A + + M K
Sbjct: 607 GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK 641
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 204/428 (47%), Gaps = 16/428 (3%)
Query: 30 PPPLNPTLKSLCKSGKLEEALRLIESPN-PTPYQDEDIS--QLLHLCISRKSLEHGQKLH 86
P +N +++L + G+ +AL L + +P+ + LL C + +L +G+ +H
Sbjct: 24 PASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIH 83
Query: 87 QHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVF------QDEEEDPPESVWVAMAI 140
++ R +P + + L+ +Y CG LD A +VF Q +VW +M
Sbjct: 84 GSVVVLGWRY--DPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMID 141
Query: 141 GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSR--VGRAIHAQLAKRDE 198
GY + R KE + +R ML V P F+ S+ + G+ R G+ IH + +
Sbjct: 142 GYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSL 201
Query: 199 EADQVVNNALLRFYVECGCSGDVLRVF-EVMPQRNVVSWNTLIAGFSGQGKVFETLDAFR 257
+ D + AL+ Y + G S D RVF E+ + NVV WN +I GF G G +LD +
Sbjct: 202 DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM 261
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
+ + + T L C+Q G++IH +VK G D + +L+ MY+KC
Sbjct: 262 LAK-NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKC 320
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
G +G + VF + K L WN M+A Y+ N A+DLF M + ++ PD T +++
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI 380
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSG 437
S CS GL + G+ + +Q + + L+ + + G +A V ++M K
Sbjct: 381 SCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK-DM 439
Query: 438 SIWGSLLN 445
WGSL++
Sbjct: 440 VAWGSLIS 447
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 191/378 (50%), Gaps = 11/378 (2%)
Query: 80 EHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMA 139
E G+++H +L + + + LK+ LI +Y G +A RVF + E+ +W M
Sbjct: 187 EEGKQIHGFML--RNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
Query: 140 IGYSRNRLSKEALLVYRDMLAR--SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD 197
+G+ + + + +L +Y MLA+ SV+ + +F+ AL AC+ +S GR IH + K
Sbjct: 245 VGFGGSGICESSLDLY--MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG 302
Query: 198 EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFR 257
D V +LL Y +CG G+ VF + + + WN ++A ++ + LD F
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M+ K + S+ TL+ V+ C+ L + GK +H ++ K ++ + +AL+ +Y+KC
Sbjct: 363 FMRQKSVLPDSF-TLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKC 421
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN--IRPDGITFVS 375
G VF ME KD+ +W ++++G NG+ ++A+ +F +M + ++PD S
Sbjct: 422 GCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTS 481
Query: 376 LLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKL 435
+ + C+ G + M G+ ++ + L+D+ + G + AL V +M +
Sbjct: 482 VTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE- 540
Query: 436 SGSIWGSLLNSCRLDGNV 453
+ W S++ SC N+
Sbjct: 541 NMVAWNSMI-SCYSRNNL 557
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 184/381 (48%), Gaps = 25/381 (6%)
Query: 37 LKSLCKSGKLEEALRL---IESPNPTPYQDEDI-SQLLHLCISRKSLEHGQKLHQHLLHS 92
+ LCK+GK +EAL++ ++ + + D DI + + + C ++L G ++H ++
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI-- 503
Query: 93 KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL 152
K ++ N + S LI LYS CG + A +VF + + W +M YSRN L + ++
Sbjct: 504 KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA-WNSMISCYSRNNLPELSI 562
Query: 153 LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFY 212
++ ML++ + P + + + L A + G+++H + +D + NAL+ Y
Sbjct: 563 DLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMY 622
Query: 213 VECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
V+CG S +F+ M +++++WN +I G+ G L F M+ K G +T
Sbjct: 623 VKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMK-KAGESPDDVTF 681
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKAD---RPLLNALMDMYAKCGSIGYCKKVFDG 329
+++ C HSG G+ + K D P + +M G G ++ +
Sbjct: 682 LSLISACN-----HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSF 736
Query: 330 MES----KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPD-GITFVSLLSGCSHSG 384
+++ D + W +L+ + +E I ++++R + P+ G T+V L++ +G
Sbjct: 737 IKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLR--MEPERGSTYVQLINLYMEAG 794
Query: 385 LTSEGQKFFNLMQDYGV--QP 403
L +E K LM++ G+ QP
Sbjct: 795 LKNEAAKLLGLMKEKGLHKQP 815
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/471 (35%), Positives = 262/471 (55%), Gaps = 7/471 (1%)
Query: 67 SQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDE 126
S +L C S +L G ++H + + K + + + + LI +Y+ C L +AR+VF D
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTI--KANLGNDSYVTNSLIDMYAKCDCLTDARKVF-DI 410
Query: 127 EEDPPESVWVAMAIGYSRNRLS---KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS 183
++ AM GYSR EAL ++RDM R + P F L+A +
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSL 470
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
+ + IH + K D +AL+ Y C C D VF+ M +++V WN++ AG+
Sbjct: 471 GLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGY 530
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKAD 303
Q + E L+ F +QL + T ++ L ++ G+E H Q++K G + +
Sbjct: 531 VQQSENEEALNLFLELQLSRERPDEF-TFANMVTAAGNLASVQLGQEFHCQLLKRGLECN 589
Query: 304 RPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR 363
+ NAL+DMYAKCGS K FD S+D+ WN++++ Y+ +G+ +KA+ + ++M+
Sbjct: 590 PYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649
Query: 364 SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDE 423
I P+ ITFV +LS CSH+GL +G K F LM +G++P EHY C+V +LGR+G+L++
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNK 709
Query: 424 ALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYAD 483
A + MP K + +W SLL+ C GNV LAE AAE +P ++G++ MLSNIYA
Sbjct: 710 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYAS 769
Query: 484 AGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEY 534
GMW K+VRE M + G+ K+ G SWI I + +H F++ S +++ Y
Sbjct: 770 KGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIY 820
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 222/448 (49%), Gaps = 15/448 (3%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
+S +L C LE G+++H H+L + + +L + LI Y CGR+ A ++F
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEM--DASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 126 EEEDPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS 183
P +++ W + GY +N L KEA+ ++ M ++P +A S L +C +
Sbjct: 310 M---PNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHAL 366
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
G +HA K + D V N+L+ Y +C C D +VF++ +VV +N +I G+
Sbjct: 367 GFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGY 426
Query: 244 S---GQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGK 300
S Q ++ E L+ FR M+ + + S +T ++L A LT+L K+IHG + K G
Sbjct: 427 SRLGTQWELHEALNIFRDMRFRL-IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485
Query: 301 KADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDE 360
D +AL+D+Y+ C + + VFD M+ KDL WN+M AGY + E+A++LF E
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE 545
Query: 361 MIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGK 420
+ S RPD TF ++++ + GQ+F + G++ + L+D+ + G
Sbjct: 546 LQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605
Query: 421 LDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE--IEPNNAGNYVMLS 478
++A A + W S+++S G A E++ IEPN +V +
Sbjct: 606 PEDAHK-AFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI-TFVGVL 663
Query: 479 NIYADAGMWEGVKRVREMMAIRGIKKDA 506
+ + AG+ E + E+M GI+ +
Sbjct: 664 SACSHAGLVEDGLKQFELMLRFGIEPET 691
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 195/394 (49%), Gaps = 50/394 (12%)
Query: 86 HQHLLHSKGRVIE-----NPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAI 140
+Q+++H G++I + L + LI LYS G + AR+VF+ E S W M
Sbjct: 62 YQNVVH--GQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVS-WSTMVS 118
Query: 141 GYSRNRLSKEALLVYRDML-ARSVEPGNFAFSVALKACTDVGDSRVGR----AIHAQLAK 195
+ + + +E+L+V+ + R P + S ++AC+ + D R GR + + L K
Sbjct: 119 ACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL-DGR-GRWMVFQLQSFLVK 176
Query: 196 RDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDA 255
+ D V L+ FY++ G VF+ +P+++ V+W T+I+G G+ + +L
Sbjct: 177 SGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQL 236
Query: 256 FRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYA 315
F + + +I L+TVL C+ L L GK+IH I++ G + D L+N L+D Y
Sbjct: 237 FYQLMEDNVVPDGYI-LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYV 295
Query: 316 KCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVS 375
KCG + K+F+GM +K++ SW T+L+GY N ++A++LF M + ++PD S
Sbjct: 296 KCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSS 355
Query: 376 LLSGCS--HS-GLTSEGQKFF---NLMQDYGVQPSL-EHYA---CLVDI----------- 414
+L+ C+ H+ G ++ + NL D V SL + YA CL D
Sbjct: 356 ILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAAD 415
Query: 415 -------------LGRSGKLDEALTVARNMPMKL 435
LG +L EAL + R+M +L
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 9/282 (3%)
Query: 168 FAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEV 227
FA + L+A D+ + +H Q+ E D ++N L+ Y G +VFE
Sbjct: 47 FARLLQLRASDDLLHYQ--NVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEK 104
Query: 228 MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHS 287
MP+RN+VSW+T+++ + G E+L F + L++ + C+ L
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--R 162
Query: 288 GK----EIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLA 343
G+ ++ +VKSG D + L+D Y K G+I Y + VFD + K +W TM++
Sbjct: 163 GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS 222
Query: 344 GYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQP 403
G G+ ++ LF +++ N+ PDG ++LS CS G++ + YG++
Sbjct: 223 GCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEM 282
Query: 404 SLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLN 445
L+D + G++ A + MP K S W +LL+
Sbjct: 283 DASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS-WTTLLS 323
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 285 LHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAG 344
LH +HGQI+ G + D L N L+++Y++ G + Y +KVF+ M ++L SW+TM++
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 345 YSINGQIEKAIDLFDEMIRSNI-RPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQP 403
+ +G E+++ +F E R+ P+ S + C SGL G+ +Q + V+
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKS 177
Query: 404 SLEH----YACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETA 459
+ L+D + G +D A V +P K S W ++++ C G ++
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK-STVTWTTMISGCVKMGRSYVSLQL 236
Query: 460 AERLFEIEPNNAGNYVMLSNIYADAGM---WEGVKRVREMMAIRGIKKDA 506
+L +E N + +LS + + + EG K++ + G++ DA
Sbjct: 237 FYQL--MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/444 (36%), Positives = 254/444 (57%), Gaps = 8/444 (1%)
Query: 73 CISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPE 132
C+ LE+G +H L K + ++ + L+ +Y+ G ++ A++VF DE
Sbjct: 119 CVGLGLLENGILIHG--LAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVF-DEIPVRNS 175
Query: 133 SVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQ 192
+W + GY + E ++ M + +KAC +V +VG+ +H
Sbjct: 176 VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV 235
Query: 193 LAKRD--EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVF 250
+R +++D + +++ YV+C + ++FE RNVV W TLI+GF+ +
Sbjct: 236 SIRRSFIDQSDYL-QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAV 294
Query: 251 ETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNAL 310
E D FR M L+E + + TL +L C+ L +L GK +HG ++++G + D +
Sbjct: 295 EAFDLFRQM-LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSF 353
Query: 311 MDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDG 370
+DMYA+CG+I + VFD M +++ SW++M+ + ING E+A+D F +M N+ P+
Sbjct: 354 IDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNS 413
Query: 371 ITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVAR 429
+TFVSLLS CSHSG EG K F M +DYGV P EHYAC+VD+LGR+G++ EA +
Sbjct: 414 VTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFID 473
Query: 430 NMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEG 489
NMP+K S WG+LL++CR+ V LA AE+L +EP + YV+LSNIYADAGMWE
Sbjct: 474 NMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEM 533
Query: 490 VKRVREMMAIRGIKKDAGCSWIQI 513
V VR M I+G +K G S ++
Sbjct: 534 VNCVRRKMGIKGYRKHVGQSATEV 557
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 194/443 (43%), Gaps = 16/443 (3%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEE- 127
LL + K+L H Q++H ++ + L S L Y RLD A F
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFE--DEVVLGSSLTNAYIQSNRLDFATSSFNRIPC 67
Query: 128 EDPPESVWVAMAIGYSRNRLS--KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV 185
W + GYS+++ + LL+Y M +F A+KAC +G
Sbjct: 68 WKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLEN 127
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
G IH K + D V +L+ Y + G +VF+ +P RN V W L+ G+
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK 187
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHG-QIVKSGKKADR 304
K E F M+ G+ +TL ++ C + A GK +HG I +S
Sbjct: 188 YSKDPEVFRLFCLMR-DTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 305 PLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRS 364
L +++DMY KC + +K+F+ +++ W T+++G++ + +A DLF +M+R
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 365 NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
+I P+ T ++L CS G G+ M G++ ++ +D+ R G + A
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 425 LTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIE-----PNNAGNYVMLSN 479
TV MP + S W S++N+ ++G L E A + +++ PN+ +LS
Sbjct: 367 RTVFDMMPERNVIS-WSSMINAFGING---LFEEALDCFHKMKSQNVVPNSVTFVSLLSA 422
Query: 480 IYADAGMWEGVKRVREMMAIRGI 502
+ EG K+ M G+
Sbjct: 423 CSHSGNVKEGWKQFESMTRDYGV 445
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLK-SKLITLYSVCGRLDEARRVFQ 124
++ +L C S SL HG+ +H +++ + IE + + I +Y+ CG + AR VF
Sbjct: 315 LAAILVSCSSLGSLRHGKSVHGYMIRNG---IEMDAVNFTSFIDMYARCGNIQMARTVFD 371
Query: 125 DEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSR 184
E S W +M + N L +EAL + M +++V P + F L AC+ G+ +
Sbjct: 372 MMPERNVIS-WSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Query: 185 VG 186
G
Sbjct: 431 EG 432
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 271/475 (57%), Gaps = 8/475 (1%)
Query: 51 RLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENP-TLKSKLITL 109
R++ + + TP + I+ L+ C + G+ +H ++ R N +L + L+
Sbjct: 152 RMVMASDVTPDRVTLIT-LVSACTKLSNSRLGRCVHGFVIR---RGFSNDLSLVNSLLNC 207
Query: 110 YSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFA 169
Y+ EA +F+ E S W + Y +N + EALLV+ DM+ EP
Sbjct: 208 YAKSRAFKEAVNLFKMIAEKDVIS-WSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 266
Query: 170 FSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMP 229
L+AC D GR H ++ E + V+ AL+ Y++C + VF +P
Sbjct: 267 VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 326
Query: 230 QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGK 289
+++VVSW LI+GF+ G +++ F M L+ I + VL C++L L K
Sbjct: 327 RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK 386
Query: 290 EIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSING 349
H ++K G ++ + +L+++Y++CGS+G KVF+G+ KD W +++ GY I+G
Sbjct: 387 CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHG 446
Query: 350 QIEKAIDLFDEMIRSN-IRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEH 407
+ KA++ F+ M++S+ ++P+ +TF+S+LS CSH+GL EG + F LM DY + P+LEH
Sbjct: 447 KGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEH 506
Query: 408 YACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIE 467
YA LVD+LGR G LD A+ + + MP + I G+LL +CR+ N +AET A++LFE+E
Sbjct: 507 YAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELE 566
Query: 468 PNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVA 522
N+AG Y+++SN+Y G WE V+++R + RGIKK S I+I++++H FVA
Sbjct: 567 SNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVA 621
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 228/481 (47%), Gaps = 31/481 (6%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDED------ISQLLHLCISRKSLEHGQKLHQ 87
N LKSL + + EE L ++DE+ + L C + + +G+ +H
Sbjct: 29 NTLLKSLSREKQWEEVLYHFSHM----FRDEEKPDNFTLPVALKACGELREVNYGEMIH- 83
Query: 88 HLLHSKGRVIENPTLKS------KLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIG 141
G V ++ TL S LI +Y CGR+ EA R+F DE E P W +M G
Sbjct: 84 ------GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMF-DELEKPDIVTWSSMVSG 136
Query: 142 YSRNRLSKEALLVYRDM-LARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEA 200
+ +N +A+ +R M +A V P + ACT + +SR+GR +H + +R
Sbjct: 137 FEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSN 196
Query: 201 DQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQ 260
D + N+LL Y + + + +F+++ +++V+SW+T+IA + G E L F M
Sbjct: 197 DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDM- 255
Query: 261 LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI 320
+ +G + T+ VL CA L G++ H ++ G + + + AL+DMY KC S
Sbjct: 256 MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSP 315
Query: 321 GYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM-IRSNIRPDGITFVSLLSG 379
VF + KD+ SW +++G+++NG ++I+ F M + +N RPD I V +L
Sbjct: 316 EEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGS 375
Query: 380 CSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSI 439
CS G + + F + + YG + A LV++ R G L A V + +K +
Sbjct: 376 CSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVV 434
Query: 440 WGSLLNSCRLDGNVSLAETAAERLF---EIEPNNAGNYVMLSNIYADAGMWEGVKRVREM 496
W SL+ + G + A + E++PN +LS + EG++ + M
Sbjct: 435 WTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Query: 497 M 497
+
Sbjct: 495 V 495
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 135 WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLA 194
W + SR + +E L + M +P NF VALKAC ++ + G IH
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHG-FV 86
Query: 195 KRDEE--ADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFET 252
K+D +D V ++L+ Y++CG + LR+F+ + + ++V+W+++++GF G ++
Sbjct: 87 KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQA 146
Query: 253 LDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMD 312
++ FR M + + +TL T++ C +L+ G+ +HG +++ G D L+N+L++
Sbjct: 147 VEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN 206
Query: 313 MYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGIT 372
YAK + +F + KD+ SW+T++A Y NG +A+ +F++M+ P+ T
Sbjct: 207 CYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 266
Query: 373 FVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMP 432
+ +L C+ + +G+K L G++ ++ LVD+ + +EA V +P
Sbjct: 267 VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 326
Query: 433 MKLSGSIWGSLLNSCRLDG 451
K S W +L++ L+G
Sbjct: 327 RKDVVS-WVALISGFTLNG 344
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 145/307 (47%), Gaps = 7/307 (2%)
Query: 218 SGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLP 277
S D ++F M +R++ WNTL+ S + + E L F M E ++ TL L
Sbjct: 10 SVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNF-TLPVALK 68
Query: 278 ICAQLTALHSGKEIHGQIVKSGK-KADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT 336
C +L ++ G+ IHG + K +D + ++L+ MY KCG + ++FD +E D+
Sbjct: 69 ACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIV 128
Query: 337 SWNTMLAGYSINGQIEKAIDLFDEMIR-SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNL 395
+W++M++G+ NG +A++ F M+ S++ PD +T ++L+S C+ + G+
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF 188
Query: 396 MQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSL 455
+ G L L++ +S EA+ + + + K S W +++ +G +
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVIS-WSTVIACYVQNGAAAE 247
Query: 456 AETAAERLFE--IEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQI 513
A + + EPN A +L A + +G ++ E+ +G++ + S +
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG-RKTHELAIRKGLETEVKVSTALV 306
Query: 514 KQRIHTF 520
+ F
Sbjct: 307 DMYMKCF 313
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 192/646 (29%), Positives = 317/646 (49%), Gaps = 40/646 (6%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDED---ISQLLHLCISRKSLEHGQKLH---- 86
N + SL K GK +A L N D +S LL C L G++LH
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAI 312
Query: 87 -----QHL--------LHSKG------------RVIENPTLKSKLITLYSVCGRLDEARR 121
Q L +SK + ++ +++IT Y G +D A
Sbjct: 313 RIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVE 372
Query: 122 VFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVG 181
+F + E + + A+ G+ RN +AL ++ DML R VE +F+ + A+ AC V
Sbjct: 373 IFANVTEKNTIT-YNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVS 431
Query: 182 DSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR--NVVSWNTL 239
+ +V IH K + + ALL C D +F+ P + + ++
Sbjct: 432 EKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSI 491
Query: 240 IAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSG 299
I G++ G + + F ++ + ++LT +L +C L G +IH +K+G
Sbjct: 492 IGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAG 551
Query: 300 KKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFD 359
+D L N+L+ MYAKC K+F+ M D+ SWN++++ Y + ++A+ L+
Sbjct: 552 YFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWS 611
Query: 360 EMIRSNIRPDGITFVSLLSGCSHS---GLTSEGQKFFNLMQDYGVQPSLEHYACLVDILG 416
M I+PD IT ++S ++ L+S F ++ Y ++P+ EHY V +LG
Sbjct: 612 RMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLG 671
Query: 417 RSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVM 476
G L+EA +MP++ S+ +LL+SCR+ N S+A+ A+ + +P Y++
Sbjct: 672 HWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYIL 731
Query: 477 LSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLK 536
SNIY+ +G W + +RE M RG +K SWI + +IH+F A +S + Y
Sbjct: 732 KSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRG 791
Query: 537 IWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGA-GMPIRIT 595
+ + +K GY PNT+ VL +++E MK ++ HS +LA + ++ + G P+R+
Sbjct: 792 LEILIMECLK-VGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVM 850
Query: 596 KNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
KN+ +C DCH + K +S V +R IVLRD++ FHHF NG CSC D W
Sbjct: 851 KNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 162/337 (48%), Gaps = 11/337 (3%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
LL L +E + +H L + E L + LI+ Y G EA VF
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLRE---EKTRLGNALISTYLKLGFPREAILVFVSLS- 141
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDML-ARSVEPGNFAFSVALKACTDVGDSRVGR 187
P + A+ G+SR L EAL V+ M A V+P + F L AC V +G
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 188 AIHAQLAKRDEEADQVVNNALLRFY-VECGCS-GDVLRVFEVMPQRNVVSWNTLIAGFSG 245
IH + K V+N+L+ Y + G S DVL++F+ +PQR+V SWNT+++
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
+GK + D F M EG G TL+T+L C + L G+E+HG+ ++ G +
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
+ NAL+ Y+K + + +++ M ++D ++ M+ Y G ++ A+++F + N
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 366 IRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQ 402
IT+ +L++G +G + K F M GV+
Sbjct: 382 T----ITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 288/534 (53%), Gaps = 42/534 (7%)
Query: 134 VWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACT------DVGDSRVGR 187
W +M + L K+A+ V+ M + V F + L C+ D+ + V +
Sbjct: 228 TWNSMIAAFQCCNLGKKAIGVFMRMHSDGV---GFDRATLLNICSSLYKSSDLVPNEVSK 284
Query: 188 A---IHAQLAKRDEEADQVVNNALLRFYVE-CGCSGDVLRVFEVMPQ-RNVVSWNTLIAG 242
+H+ K V AL++ Y E D ++F M R++V+WN +I
Sbjct: 285 CCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITA 344
Query: 243 FSGQGKVFETLDAFRAMQL-----KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVK 297
F+ D RA+ L +E + W T ++VL CA L IH Q++K
Sbjct: 345 FA-------VYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIK 397
Query: 298 SGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDL 357
G AD L N+L+ YAKCGS+ C +VFD M+S+D+ SWN+ML YS++GQ++ + +
Sbjct: 398 GGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPV 457
Query: 358 FDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF-NLMQDYGVQPSLEHYACLVDILG 416
F +M +I PD TF++LLS CSH+G EG + F ++ + P L HYAC++D+L
Sbjct: 458 FQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLS 514
Query: 417 RSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE-IEPNNAGNYV 475
R+ + EA V + MPM +W +LL SCR GN L + AA++L E +EP N+ +Y+
Sbjct: 515 RAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYI 574
Query: 476 MLSNIY-ADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEY 534
+SNIY A+ E ++EM R ++K+ SW +I ++H F +GG A Y
Sbjct: 575 QMSNIYNAEGSFNEANLSIKEMETWR-VRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVY 633
Query: 535 LKIWNALSNAIKDSGYIPNT-DVVLHDINEEMKVMWVCGHSERLAAVFALIH------TG 587
++ L + +K+ GY+P +EE + + HSE+LA FA++ G
Sbjct: 634 REL-KRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCG 692
Query: 588 AGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+ I+I KN R+C+DCH++MK S++ + I++RD+NRFHHF++ +CSC D+W
Sbjct: 693 VNL-IQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 201/475 (42%), Gaps = 27/475 (5%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRV 96
L++L +SG + A+ L S + + L C +++L G LH H+L
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCY 92
Query: 97 IENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYR 156
+N L + LI +Y+ CG + AR+VF E S W A+ GY + +E ++
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVS-WTALITGYVQAGNEQEGFCLFS 151
Query: 157 DMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVEC- 215
ML+ P F S L +C G+ +H K V NA++ Y C
Sbjct: 152 SMLSHCF-PNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCH 206
Query: 216 --GCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLT 273
+ + VFE + +N+V+WN++IA F + + F M +G+GF TL
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMH-SDGVGFDRATL- 264
Query: 274 TVLPICAQL---------TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAK-CGSIGYC 323
L IC+ L ++H VKSG + AL+ +Y++ C
Sbjct: 265 --LNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDC 322
Query: 324 KKVFDGM-ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSH 382
K+F M +D+ +WN ++ +++ E+AI LF ++ + + PD TF S+L C+
Sbjct: 323 YKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAG 381
Query: 383 SGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGS 442
+ G L+ + G LD + V +M + S W S
Sbjct: 382 LVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS-WNS 440
Query: 443 LLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMM 497
+L + L G V +++ +I P++A +LS + EG++ R M
Sbjct: 441 MLKAYSLHGQVDSILPVFQKM-DINPDSATFIALLSACSHAGRVEEGLRIFRSMF 494
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/599 (30%), Positives = 309/599 (51%), Gaps = 29/599 (4%)
Query: 44 GKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLK 103
G E L PN Y S +L LC + +SL+ G+++H + K ++ +
Sbjct: 311 GTFLEMRSLGLQPNNFTY-----SAILSLCSAVRSLDFGKQIHSQTI--KVGFEDSTDVG 363
Query: 104 SKLITLYSVCGRLD-EARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARS 162
+ L+ +Y C + EA RVF P W + +G + ++ + +M+ R
Sbjct: 364 NALVDMYMKCSASEVEASRVF-GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL 222
VEP S L+AC+ + R IHA L +R + + VV N+L+ Y
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL 282
V M +R+ +++ +L+ F+ GK L M +G+ ++L + A L
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYM-YGDGIRMDQLSLPGFISASANL 541
Query: 283 TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTML 342
AL +GK +H VKSG +LN+L+DMY+KCGS+ KKVF+ + + D+ SWN ++
Sbjct: 542 GALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLV 601
Query: 343 AGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGV 401
+G + NG I A+ F+EM PD +TF+ LLS CS+ LT G ++F +M+ Y +
Sbjct: 602 SGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNI 661
Query: 402 QPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAE 461
+P +EHY LV ILGR+G+L+EA V M +K + I+ +LL +CR GN+SL E A
Sbjct: 662 EPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMAN 721
Query: 462 RLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFV 521
+ + P++ Y++L+++Y ++G E ++ R +M + + K G S ++++ ++H+FV
Sbjct: 722 KGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFV 781
Query: 522 AGGSSDF-RSSAEYLKIWNALSNAIKDSG--YIPNTDVVLHDINEEMKVMWVCGHSERLA 578
+ + +++ Y +I ++ IK G Y N + HS + A
Sbjct: 782 SEDVTRVDKTNGIYAEI-ESIKEEIKRFGSPYRGNENASF--------------HSAKQA 826
Query: 579 AVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSC 637
V+ I+ P+ + KN +C DCH ++ ++R+ + I +RD N+ H F+NG CSC
Sbjct: 827 VVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 194/403 (48%), Gaps = 8/403 (1%)
Query: 79 LEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAM 138
LE G+ +H +++ +G + N LK+ L+ YS ++++A RV E +W ++
Sbjct: 240 LEFGKTIHSNII-VRG-IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDV-FLWTSV 296
Query: 139 AIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDE 198
G+ RN +KEA+ + +M + ++P NF +S L C+ V G+ IH+Q K
Sbjct: 297 VSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGF 356
Query: 199 EADQVVNNALLRFYVECGCSG-DVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFR 257
E V NAL+ Y++C S + RVF M NVVSW TLI G G V +
Sbjct: 357 EDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLM 416
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M +K + + +TL+ VL C++L + EIH +++ + + N+L+D YA
Sbjct: 417 EM-VKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASS 475
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
+ Y V M+ +D ++ +++ ++ G+ E A+ + + M IR D ++ +
Sbjct: 476 RKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFI 535
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSG 437
S ++ G G+ G + LVD+ + G L++A V +
Sbjct: 536 SASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVV 595
Query: 438 SIWGSLLNSCRLDGNVSLAETAAE--RLFEIEPNNAGNYVMLS 478
S W L++ +G +S A +A E R+ E EP++ ++LS
Sbjct: 596 S-WNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 154/330 (46%), Gaps = 3/330 (0%)
Query: 85 LHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSR 144
LH H K ++EN L + L++LY + AR++F DE W M +++
Sbjct: 43 LHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLF-DEMSHRTVFAWTVMISAFTK 101
Query: 145 NRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVV 204
++ AL ++ +M+A P F FS +++C + D G +H + K E + VV
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 205 NNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEG 264
++L Y +CG + +F + + +SW +I+ G K E L + M +K G
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEM-VKAG 220
Query: 265 MGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
+ + T +L + L GK IH I+ G + L +L+D Y++ +
Sbjct: 221 VPPNEFTFVKLLG-ASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
+V + +D+ W ++++G+ N + ++A+ F EM ++P+ T+ ++LS CS
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339
Query: 385 LTSEGQKFFNLMQDYGVQPSLEHYACLVDI 414
G++ + G + S + LVD+
Sbjct: 340 SLDFGKQIHSQTIKVGFEDSTDVGNALVDM 369
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 153/324 (47%), Gaps = 6/324 (1%)
Query: 158 MLARSVEPGNFAFS-VALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECG 216
L+R+ E GN S + + + + SR+G IH + K + + N LL Y++
Sbjct: 13 FLSRTNELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTD 72
Query: 217 CSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL 276
+ ++F+ M R V +W +I+ F+ + L F M + G + T ++V+
Sbjct: 73 GIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEM-MASGTHPNEFTFSSVV 131
Query: 277 PICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT 336
CA L + G +HG ++K+G + + + ++L D+Y+KCG ++F +++ D
Sbjct: 132 RSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTI 191
Query: 337 SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM 396
SW M++ + +A+ + EM+++ + P+ TFV LL S GL G+ + +
Sbjct: 192 SWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEF-GKTIHSNI 250
Query: 397 QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC--RLDGNVS 454
G+ ++ LVD + K+++A+ V N + +W S+++ L +
Sbjct: 251 IVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVL-NSSGEQDVFLWTSVVSGFVRNLRAKEA 309
Query: 455 LAETAAERLFEIEPNNAGNYVMLS 478
+ R ++PNN +LS
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAILS 333
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/522 (31%), Positives = 288/522 (55%), Gaps = 21/522 (4%)
Query: 46 LEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHL--LHSKGRVIENPTLK 103
E ++ SPN + +S +L C + K L +G +H + L +G + +
Sbjct: 99 FHEMVKQGTSPN-----EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLY----VD 149
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
+ ++ +Y+ C EA + + + + W + G++ L +Y+ ML +
Sbjct: 150 NAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENA 209
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR 223
E + ++A++A + G+ IHA + KR +++ V N++L Y CG +
Sbjct: 210 EVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKH 269
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF--SWITLTTVLPICAQ 281
F M +++++WNTLI+ ++ +A Q E GF + T T+++ CA
Sbjct: 270 YFHEMEDKDLITWNTLISELERS----DSSEALLMFQRFESQGFVPNCYTFTSLVAACAN 325
Query: 282 LTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF-DGMESKDLTSWNT 340
+ AL+ G+++HG+I + G + L NAL+DMYAKCG+I ++VF + ++ ++L SW +
Sbjct: 326 IAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTS 385
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ-DY 399
M+ GY +G +A++LFD+M+ S IRPD I F+++LS C H+GL +G K+FN+M+ +Y
Sbjct: 386 MMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEY 445
Query: 400 GVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG-NVSLAET 458
G+ P + Y C+VD+LGR+GK+ EA + MP K S WG++L +C+ N ++
Sbjct: 446 GINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRL 505
Query: 459 AAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIH 518
AA ++ E++P G YVMLS IYA G W RVR+MM + G KK+AG SWI ++ ++
Sbjct: 506 AARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVF 565
Query: 519 TFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHD 560
+F +S+ Y + L +++GY+P D +++D
Sbjct: 566 SFAVSDKMCPNASSVY-SVLGLLIEETREAGYVPELDSLVND 606
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 168/344 (48%), Gaps = 4/344 (1%)
Query: 102 LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
L + LI Y G ++EAR +F DE D W AM GY+ + + A + +M+ +
Sbjct: 47 LATNLIVSYFEKGLVEEARSLF-DEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV 221
P F S LK+C ++ G +H + K E V+NA++ Y C + +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 222 L-RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICA 280
+F + +N V+W TLI GF+ G L ++ M L E + +T + A
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLL-ENAEVTPYCITIAVRASA 224
Query: 281 QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNT 340
+ ++ +GK+IH ++K G +++ P++N+++D+Y +CG + K F ME KDL +WNT
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
+++ + E A+ +F P+ TF SL++ C++ + GQ+ + G
Sbjct: 285 LISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
++E L+D+ + G + ++ V + + + W S++
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMM 387
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 280/522 (53%), Gaps = 37/522 (7%)
Query: 78 SLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVA 137
+L G+KLH H++ K + N +++ L+ +YS+CG +D AR VF ++ S W
Sbjct: 150 ALACGKKLHCHVV--KFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFS-WNL 206
Query: 138 MAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD 197
M GY+R + +E++ + +M V P + + L AC+ V D + + +H +++
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 198 EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKV-------- 249
E + NAL+ Y CG +R+F M R+V+SW +++ G+ +G +
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 250 -----------------------FETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALH 286
E+L+ FR MQ GM T+ +VL CA L +L
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQ-SAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 287 SGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYS 346
G+ I I K+ K D + NAL+DMY KCG +KVF M+ +D +W M+ G +
Sbjct: 386 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 445
Query: 347 INGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ-DYGVQPSL 405
NGQ ++AI +F +M +I+PD IT++ +LS C+HSG+ + +KFF M+ D+ ++PSL
Sbjct: 446 NNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSL 505
Query: 406 EHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE 465
HY C+VD+LGR+G + EA + R MPM + +WG+LL + RL + +AE AA+++ E
Sbjct: 506 VHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILE 565
Query: 466 IEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGS 525
+EP+N Y +L NIYA W+ ++ VR + IKK G S I++ H FVAG
Sbjct: 566 LEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDK 625
Query: 526 SDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKV 567
S +S Y+K+ L+ + Y+P+T +L + + V
Sbjct: 626 SHLQSEEIYMKL-EELAQESTFAAYLPDTSELLFEAGDAYSV 666
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 166/343 (48%), Gaps = 13/343 (3%)
Query: 65 DISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLY--SVCGRLDEARRV 122
D S+ + + K+ + ++LH + ++G V NPT + KL + + G + A ++
Sbjct: 33 DYSRFISILGVCKTTDQFKQLHSQSI-TRG-VAPNPTFQKKLFVFWCSRLGGHVSYAYKL 90
Query: 123 FQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACT-DVG 181
F E P VW M G+S+ E + +Y +ML V P + F L D G
Sbjct: 91 FVKIPE-PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGG 149
Query: 182 DSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIA 241
G+ +H + K ++ V NAL++ Y CG VF+ + +V SWN +I+
Sbjct: 150 ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209
Query: 242 GFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKK 301
G++ + E+++ M+ + + + +TL VL C+++ K +H + + +
Sbjct: 210 GYNRMKEYEESIELLVEME-RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE 268
Query: 302 ADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM 361
L NAL++ YA CG + ++F M+++D+ SW +++ GY G ++ A FD+M
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 362 -IRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQP 403
+R D I++ ++ G +G +E + F MQ G+ P
Sbjct: 329 PVR-----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIP 366
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 187/417 (44%), Gaps = 31/417 (7%)
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVE--CGCSGDVLRVFEVMPQRNVVSWNTLIAGFS 244
+ +H+Q R + L F+ G ++F +P+ +VV WN +I G+S
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 245 GQGKVFETLDAFRAMQLKEGMGFSWITLTTVLP-ICAQLTALHSGKEIHGQIVKSGKKAD 303
E + + M LKEG+ T +L + AL GK++H +VK G ++
Sbjct: 111 KVDCDGEGVRLYLNM-LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSN 169
Query: 304 RPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR 363
+ NAL+ MY+ CG + + VFD +D+ SWN M++GY+ + E++I+L EM R
Sbjct: 170 LYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMER 229
Query: 364 SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDE 423
+ + P +T + +LS CS ++ + + +PSL LV+ G++D
Sbjct: 230 NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDI 289
Query: 424 ALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYAD 483
A+ + R+M + S W S++ GN+ LA T + ++ + ++ ++ + Y
Sbjct: 290 AVRIFRSMKARDVIS-WTSIVKGYVERGNLKLARTYFD---QMPVRDRISWTIMIDGYLR 345
Query: 484 AGMW-EGVKRVREMMAIRGIKKD----------AGCSWIQIKQRIHTFVAGGSSDFRSSA 532
AG + E ++ REM + I + A ++I + I T++ D
Sbjct: 346 AGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI-----DKNKIK 400
Query: 533 EYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAG 589
+ + NAL + G V HD+++ K W A V L + G G
Sbjct: 401 NDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWT-------AMVVGLANNGQG 450
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 38/318 (11%)
Query: 47 EEALRLIESPNPTPYQDEDISQLLHL--CISRKSLEHGQKLHQHLLHSKGRVIENPTLKS 104
EE++ L+ ++ LL L C K + +++H+++ S+ + + L++
Sbjct: 218 EESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV--SECKTEPSLRLEN 275
Query: 105 KLITLYSVCGRLDEARRVFQ------------------------------DEEEDPPESV 134
L+ Y+ CG +D A R+F+ D+
Sbjct: 276 ALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRIS 335
Query: 135 WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLA 194
W M GY R E+L ++R+M + + P F L AC +G +G I +
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 195 KRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLD 254
K + D VV NAL+ Y +CGCS +VF M QR+ +W ++ G + G+ E +
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIK 455
Query: 255 AFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLN--ALMD 312
F MQ + IT VL C + ++ ++ +S + + L++ ++D
Sbjct: 456 VFFQMQ-DMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM-RSDHRIEPSLVHYGCMVD 513
Query: 313 MYAKCGSIGYCKKVFDGM 330
M + G + ++ M
Sbjct: 514 MLGRAGLVKEAYEILRKM 531
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 113/261 (43%), Gaps = 28/261 (10%)
Query: 48 EALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLI 107
E R ++S P + +S +L C SLE G+ + ++ K ++ + + + LI
Sbjct: 354 EIFREMQSAGMIPDEFTMVS-VLTACAHLGSLEIGEWIKTYI--DKNKIKNDVVVGNALI 410
Query: 108 TLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGN 167
+Y CG ++A++VF D ++ + W AM +G + N +EA+ V+ M S++P +
Sbjct: 411 DMYFKCGCSEKAQKVFHDMDQRD-KFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDD 469
Query: 168 FAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL----- 222
+ L AC G R A++ +D + +L+ + GC D+L
Sbjct: 470 ITYLGVLSACNHSGMVDQARKFFAKM-----RSDHRIEPSLVHY----GCMVDMLGRAGL 520
Query: 223 -----RVFEVMPQR-NVVSWNTLI-AGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTV 275
+ MP N + W L+ A + L A + ++L+ G + L +
Sbjct: 521 VKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNI 580
Query: 276 LPICAQLTALHSGKEIHGQIV 296
C + L +E+ +IV
Sbjct: 581 YAGCKRWKDL---REVRRKIV 598
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 9/194 (4%)
Query: 237 NTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIV 296
N L + F+ + +F+ A + E + + ++L +C K++H Q +
Sbjct: 5 NPLKSPFNSELSIFK---ALLMSTITESISNDYSRFISILGVCKTTDQF---KQLHSQSI 58
Query: 297 KSGKKADRPLLNALMDMYAK--CGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKA 354
G + L + G + Y K+F + D+ WN M+ G+S +
Sbjct: 59 TRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEG 118
Query: 355 IDLFDEMIRSNIRPDGITFVSLLSGCSHS-GLTSEGQKFFNLMQDYGVQPSLEHYACLVD 413
+ L+ M++ + PD TF LL+G G + G+K + +G+ +L LV
Sbjct: 119 VRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVK 178
Query: 414 ILGRSGKLDEALTV 427
+ G +D A V
Sbjct: 179 MYSLCGLMDMARGV 192
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 276/499 (55%), Gaps = 17/499 (3%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
++ L C L G+++H L K + + S LI +YS CG + +AR+VF
Sbjct: 532 LASTLKACTHVHGLYQGKQVH--CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589
Query: 126 EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV 185
E S+ A+ GYS+N L +EA++++++ML R V P F+ ++AC +
Sbjct: 590 LPEWSVVSM-NALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Query: 186 GRAIHAQLAKRDEEAD-QVVNNALLRFYVECGCSGDVLRVF-EVMPQRNVVSWNTLIAGF 243
G H Q+ KR ++ + + +LL Y+ + +F E+ +++V W +++G
Sbjct: 648 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKAD 303
S G E L ++ M+ +G+ T TVL +C+ L++L G+ IH I D
Sbjct: 708 SQNGFYEEALKFYKEMR-HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLD 766
Query: 304 RPLLNALMDMYAKCGSIGYCKKVFDGMESK-DLTSWNTMLAGYSINGQIEKAIDLFDEMI 362
N L+DMYAKCG + +VFD M + ++ SWN+++ GY+ NG E A+ +FD M
Sbjct: 767 ELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR 826
Query: 363 RSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKL 421
+S+I PD ITF+ +L+ CSH+G S+G+K F +M YG++ ++H AC+VD+LGR G L
Sbjct: 827 QSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYL 886
Query: 422 DEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIY 481
EA +K +W SLL +CR+ G+ E +AE+L E+EP N+ YV+LSNIY
Sbjct: 887 QEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIY 946
Query: 482 ADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKI---W 538
A G WE +R++M RG+KK G SWI ++QR H F AG +S +E KI
Sbjct: 947 ASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGD----KSHSEIGKIEMFL 1002
Query: 539 NALSNAIKDSGYIPNTDVV 557
L + +KD + N D+V
Sbjct: 1003 EDLYDLMKDDAVV-NPDIV 1020
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 200/424 (47%), Gaps = 13/424 (3%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQHLLH 91
N ++ +G+ + + L + Y +D + LL C + LE G + H ++
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII- 455
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
K ++ +N + + L+ +Y+ CG L++AR++F+ D W + Y ++ EA
Sbjct: 456 -KKKLAKNLFVGNALVDMYAKCGALEDARQIFE-RMCDRDNVTWNTIIGSYVQDENESEA 513
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
+++ M + + LKACT V G+ +H K + D ++L+
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
Y +CG D +VF +P+ +VVS N LIAG+S Q + E + F+ M L G+ S IT
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEM-LTRGVNPSEIT 631
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLN-ALMDMYAKCGSIGYCKKVFDGM 330
T++ C + +L G + HGQI K G ++ L +L+ MY + +F +
Sbjct: 632 FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL 691
Query: 331 ES-KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG 389
S K + W M++G+S NG E+A+ + EM + PD TFV++L CS EG
Sbjct: 692 SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751
Query: 390 QKFFNLMQDYGVQPSLEHYA--CLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
+ +L+ + + L+ L+D+ + G + + V M + + W SL+N
Sbjct: 752 RAIHSLI--FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGY 809
Query: 448 RLDG 451
+G
Sbjct: 810 AKNG 813
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 2/327 (0%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP 165
+I Y G+L +AR +F E P W M G+ + A+ + +M SV+
Sbjct: 267 VINTYIRLGKLKDARLLF-GEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 166 GNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVF 225
L A V + +G +HA+ K ++ V ++L+ Y +C +VF
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 226 EVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTAL 285
E + ++N V WN +I G++ G+ + ++ F M+ G T T++L CA L
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK-SSGYNIDDFTFTSLLSTCAASHDL 444
Query: 286 HSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGY 345
G + H I+K + + NAL+DMYAKCG++ +++F+ M +D +WNT++ Y
Sbjct: 445 EMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSY 504
Query: 346 SINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSL 405
+ +A DLF M I DG S L C+H +G++ L G+ L
Sbjct: 505 VQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDL 564
Query: 406 EHYACLVDILGRSGKLDEALTVARNMP 432
+ L+D+ + G + +A V ++P
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 130/580 (22%), Positives = 221/580 (38%), Gaps = 96/580 (16%)
Query: 60 PYQDEDISQLLHLCISRKSLEHGQKLHQHL-------------LHSKGRVI---ENPTLK 103
P D+ +LL +C+ + L +K+ + +HSK ++ L
Sbjct: 39 PSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLG 98
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
+ ++ LY+ C ++ A + F E+D + W +M YS + L + + +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFLEKDV--TAWNSMLSMYSSIGKPGKVLRSFVSLFENQI 156
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR 223
P F FS+ L C + GR IH + K E + AL+ Y +C D R
Sbjct: 157 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLT 283
VFE + N V W L +G+ G E + F M+ EG + TV+ +L
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR-DEGHRPDHLAFVTVINTYIRLG 275
Query: 284 ALHSGKEIHGQIV-------------------------------KSGKKADRPLLNALMD 312
L + + G++ KS K+ R L +++
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 313 -------------MYAKCGSIGYCKKVFDG----------------------MESKDLTS 337
++A+ +G ++ G +E K+
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 338 WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ 397
WN M+ GY+ NG+ K ++LF +M S D TF SLLS C+ S G +F +++
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 398 DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAE 457
+ +L LVD+ + G L++A + M + W +++ S D N S A
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR-DNVTWNTIIGSYVQDENESEAF 514
Query: 458 TAAER--LFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD--AGCSWIQI 513
+R L I + A L G+++G K+V + G+ +D G S I +
Sbjct: 515 DLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 514 KQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPN 553
+ G D R L W+ +S +GY N
Sbjct: 574 YSK-----CGIIKDARKVFSSLPEWSVVSMNALIAGYSQN 608
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 151/442 (34%), Positives = 254/442 (57%), Gaps = 8/442 (1%)
Query: 84 KLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYS 143
+ H H++ K + +P +++ LI+ YS G D A R+F D ED W AM G+
Sbjct: 124 QFHAHIV--KFGLDSDPFVRNSLISGYSSSGLFDFASRLF-DGAEDKDVVTWTAMIDGFV 180
Query: 144 RNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHA-QLAKRDEEADQ 202
RN + EA++ + +M V LKA V D R GR++H L + D
Sbjct: 181 RNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDV 240
Query: 203 VVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFET-LDAFRAMQL 261
+ ++L+ Y +C C D +VF+ MP RNVV+W LIAG+ Q + F+ + F M L
Sbjct: 241 FIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYV-QSRCFDKGMLVFEEM-L 298
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
K + + TL++VL CA + ALH G+ +H ++K+ + + L+D+Y KCG +
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLE 358
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
VF+ + K++ +W M+ G++ +G A DLF M+ S++ P+ +TF+++LS C+
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 382 HSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIW 440
H GL EG++ F M+ + ++P +HYAC+VD+ GR G L+EA + MPM+ + +W
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 441 GSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIR 500
G+L SC L + L + AA R+ +++P+++G Y +L+N+Y+++ W+ V RVR+ M +
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 501 GIKKDAGCSWIQIKQRIHTFVA 522
+ K G SWI++K ++ F+A
Sbjct: 539 QVVKSPGFSWIEVKGKLCEFIA 560
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 158/306 (51%), Gaps = 6/306 (1%)
Query: 141 GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEA 200
G + NR + + L YR M V P F LKA + DS + HA + K ++
Sbjct: 80 GITLNR--RLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGLDS 136
Query: 201 DQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQ 260
D V N+L+ Y G R+F+ ++VV+W +I GF G E + F M+
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 261 LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGK-KADRPLLNALMDMYAKCGS 319
K G+ + +T+ +VL ++ + G+ +HG +++G+ K D + ++L+DMY KC
Sbjct: 197 -KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSC 255
Query: 320 IGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG 379
+KVFD M S+++ +W ++AGY + +K + +F+EM++S++ P+ T S+LS
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 380 CSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSI 439
C+H G G++ M ++ + L+D+ + G L+EA+ V + K +
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK-NVYT 374
Query: 440 WGSLLN 445
W +++N
Sbjct: 375 WTAMIN 380
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 268/496 (54%), Gaps = 45/496 (9%)
Query: 53 IESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSV 112
+ S +P Y I+ L I+ + + G+K+H ++ + + N ++K L+ L+
Sbjct: 28 VSSLSPAKY----IAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIK--LLILHLK 81
Query: 113 CGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSV 172
CG L AR+VF DE P S + M GY ++ L KE LL+ + M + + S+
Sbjct: 82 CGCLSYARQVF-DELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 173 ALKACTDVGDSRV-----GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEV 227
LKA G + + R +HA++ K D E D V+ AL+ YV+ G VFE
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 228 MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM-------GFS------------ 268
M NVV ++I+G+ QG V + + F ++K+ + GFS
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 269 WI------------TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAK 316
+I T +V+ C+ LT+ G+++H QI+KSG + ++L+DMYAK
Sbjct: 261 YISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAK 320
Query: 317 CGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
CG I ++VFD M+ K++ SW +M+ GY NG E+A++LF M I P+ +TF+
Sbjct: 321 CGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGA 380
Query: 377 LSGCSHSGLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKL 435
LS CSHSGL +G + F MQ DY ++P +EHYAC+VD++GR+G L++A AR MP +
Sbjct: 381 LSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERP 440
Query: 436 SGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNN-AGNYVMLSNIYADAGMWEGVKRVR 494
IW +LL+SC L GNV LA AA LF++ + G Y+ LSN+YA W+ V ++R
Sbjct: 441 DSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIR 500
Query: 495 EMMAIRGIKKDAGCSW 510
E+M R I K G SW
Sbjct: 501 EVMKRRRISKTIGRSW 516
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 257/483 (53%), Gaps = 5/483 (1%)
Query: 44 GKLEEALRLIESPNPTPYQDEDISQLLHLCISR--KSLEHGQKLHQHLLHSKGRVIENPT 101
G++EEA+++ + D + +S ++ G H + K ++
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA 257
Query: 102 LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
L + L+T+YS C L+EA ++F D D W AM GYS+N S EA+ ++ M +
Sbjct: 258 LSNALVTMYSKCESLNEACKMF-DSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV 221
++P + L AC+D+ G+ +H+ L K E AL+ Y + GC D
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 222 LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQ 281
+ F+ + +R+V W +LI+G+ E L +R M+ G+ + T+ +VL C+
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK-TAGIIPNDPTMASVLKACSS 435
Query: 282 LTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTM 341
L L GK++HG +K G + P+ +AL MY+KCGS+ VF +KD+ SWN M
Sbjct: 436 LATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAM 495
Query: 342 LAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YG 400
++G S NGQ ++A++LF+EM+ + PD +TFV+++S CSH G G +FN+M D G
Sbjct: 496 ISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIG 555
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAA 460
+ P ++HYAC+VD+L R+G+L EA + + +W LL++C+ G L A
Sbjct: 556 LDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAG 615
Query: 461 ERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTF 520
E+L + + YV LS IY G V+RV + M G+ K+ GCSWI++K + H F
Sbjct: 616 EKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVF 675
Query: 521 VAG 523
V G
Sbjct: 676 VVG 678
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 187/370 (50%), Gaps = 10/370 (2%)
Query: 60 PYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRV-IENPTLKSKLITLYSVCGRLDE 118
P+ + +L H +++L G+ +H ++ + I++ + L+ Y+ CG+L +
Sbjct: 12 PHTSTLLKKLTHHS-QQRNLVAGRAVHGQIIRTGASTCIQHANV---LVNFYAKCGKLAK 67
Query: 119 ARRVFQDEEEDPPESVWVAMAIGYSRN---RLSKEALLVYRDMLARSVEPGNFAFSVALK 175
A +F S W ++ GYS+N S + ++R+M A+ + P + + K
Sbjct: 68 AHSIFNAIICKDVVS-WNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 176 ACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVS 235
A + + S VGR HA + K D V+ +L+ Y + G D L+VF MP+RN +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 236 WNTLIAGFSGQGKVFETLDAFRA-MQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQ 294
W+T+++G++ +G+V E + F ++ KE S T VL A + G++IH
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCI 246
Query: 295 IVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKA 354
+K+G L NAL+ MY+KC S+ K+FD ++ +W+ M+ GYS NG+ +A
Sbjct: 247 TIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 355 IDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDI 414
+ LF M + I+P T V +L+ CS EG++ + + G + L LVD+
Sbjct: 307 VKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDM 366
Query: 415 LGRSGKLDEA 424
++G L +A
Sbjct: 367 YAKAGCLADA 376
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 184/582 (31%), Positives = 288/582 (49%), Gaps = 62/582 (10%)
Query: 73 CISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPE 132
C K + G ++H + K I++ + + L+ +YS CG+L++AR+VF D ++
Sbjct: 362 CSCLKVINQGSEVHS--IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF-DSVKNKDV 418
Query: 133 SVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQ 192
W +M GY + +A ++ M ++ P
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRP--------------------------- 451
Query: 193 LAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMP-----QRNVVSWNTLIAGFSGQG 247
+ + N ++ Y++ G G+ + +F+ M QRN +WN +IAG+ G
Sbjct: 452 --------NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNG 503
Query: 248 KVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL 307
K E L+ FR MQ M S +T+ ++LP CA L +EIHG +++ A +
Sbjct: 504 KKDEALELFRKMQFSRFMPNS-VTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK 562
Query: 308 NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIR 367
NAL D YAK G I Y + +F GME+KD+ +WN+++ GY ++G A+ LF++M I
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGIT 622
Query: 368 PDGITFVSLLSGCSHSGLTSEGQK-FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALT 426
P+ T S++ G EG+K F+++ DY + P+LEH + +V + GR+ +L+EAL
Sbjct: 623 PNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQ 682
Query: 427 VARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGM 486
+ M ++ IW S L CR+ G++ +A AAE LF +EP N ++S IYA
Sbjct: 683 FIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAK 742
Query: 487 ----WEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALS 542
EG K R+ + +KK G SWI+++ IHTF G S + Y +
Sbjct: 743 LGRSLEGNKPRRDNL----LKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSR 798
Query: 543 NAIKDSGYIPNTDVVLHDINEEMKVMWVCG-HSERLAAVFALIHTGAG--MPIRITKNLR 599
+ Y N ++ + + E CG HSE+ A F LI + IRI KNLR
Sbjct: 799 LDNRSDQY--NGELWIEEEGREE----TCGIHSEKFAMAFGLISSSGASKTTIRILKNLR 852
Query: 600 VCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+C DCH K VS+ I+L DT HHF+NG CSC D+W
Sbjct: 853 MCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 242/543 (44%), Gaps = 60/543 (11%)
Query: 24 SHHNHKPPPLNP--TLKSLCKSGKLEEALRLIES--PNPTPYQDEDISQLLHLCISRKSL 79
S K P + P LC++G L EA + ++S + + +LL CI S+
Sbjct: 38 SFTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSI 97
Query: 80 EHGQKLHQHLLHSKGRVIENPTL--KSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVA 137
G+ +LH++ + P + ++KL+++Y+ CG + +AR+VF D + W A
Sbjct: 98 HLGR-----ILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVF-DSMRERNLFTWSA 151
Query: 138 MAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD 197
M YSR +E ++R M+ V P +F F L+ C + GD G+ IH+ + K
Sbjct: 152 MIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLG 211
Query: 198 EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFR 257
+ V+N++L Y +CG + F M +R+V++WN+++ + GK E ++ +
Sbjct: 212 MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVK 271
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M+ KEG+ +T ++ QL GK +A MD+ K
Sbjct: 272 EME-KEGISPGLVTWNILIGGYNQL-----GK-----------------CDAAMDLMQKM 308
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
+ G VF +W M++G NG +A+D+F +M + + P+ +T +S +
Sbjct: 309 ETFGITADVF---------TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSG 437
S CS + ++G + ++ G + LVD+ + GKL++A V ++ K
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK-DV 418
Query: 438 SIWGSLLNSCRLDGNVSLAETAAERLFE--IEPNNAGNYVMLSNIYADAGMWEGVKRVRE 495
W S++ G A R+ + + PN M+S + E + +
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
Query: 496 MMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTD 555
M ++++ +W I I ++ G D E L+++ + + S ++PN+
Sbjct: 479 MEKDGKVQRNTA-TWNLI---IAGYIQNGKKD-----EALELFRKM----QFSRFMPNSV 525
Query: 556 VVL 558
+L
Sbjct: 526 TIL 528
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 155/354 (43%), Gaps = 43/354 (12%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPES---VWVAMAIGYSRNRLSKEALLVYRDMLARS 162
LI Y+ G+ D A + Q E + W AM G N + +AL ++R M
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL 222
V P A+ AC+ + G +H+ K D +V N+L+ Y +CG D
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL 282
+VF+ + ++V +WN++I G+ G + + F MQ + + IT T++
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ-DANLRPNIITWNTMI------ 460
Query: 283 TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTML 342
SG +K+G + + MD++ + DG ++ +WN ++
Sbjct: 461 ----SG------YIKNGDEGEA------MDLFQRMEK--------DGKVQRNTATWNLII 496
Query: 343 AGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQ 402
AGY NG+ ++A++LF +M S P+ +T +SLL C++ G K + ++
Sbjct: 497 AGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN----LLGAKMVREIHGCVLR 552
Query: 403 PSLEHY----ACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGN 452
+L+ L D +SG ++ + T+ M K W SL+ L G+
Sbjct: 553 RNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK-DIITWNSLIGGYVLHGS 605
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 272/524 (51%), Gaps = 29/524 (5%)
Query: 61 YQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEAR 120
+ + +S + C K L G +++ L K + + + + I +Y C L EA
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYG--LAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 121 RVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDV 180
RVF DE W A+ + +N E L ++ ML +EP F F LKACT
Sbjct: 438 RVF-DEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG- 495
Query: 181 GDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR-NV------ 233
G G IH+ + K ++ V +L+ Y +CG + ++ QR NV
Sbjct: 496 GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEE 555
Query: 234 -------------VSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICA 280
VSWN++I+G+ + + + F M ++ G+ T TVL CA
Sbjct: 556 LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM-MEMGITPDKFTYATVLDTCA 614
Query: 281 QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNT 340
L + GK+IH Q++K ++D + + L+DMY+KCG + + +F+ +D +WN
Sbjct: 615 NLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNA 674
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ-DY 399
M+ GY+ +G+ E+AI LF+ MI NI+P+ +TF+S+L C+H GL +G ++F +M+ DY
Sbjct: 675 MICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDY 734
Query: 400 GVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD-GNVSLAET 458
G+ P L HY+ +VDILG+SGK+ AL + R MP + IW +LL C + NV +AE
Sbjct: 735 GLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEE 794
Query: 459 AAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIH 518
A L ++P ++ Y +LSN+YADAGMWE V +R M +KK+ GCSW+++K +H
Sbjct: 795 ATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELH 854
Query: 519 TFVAGGSSDFRSSAEY--LKIWNALSNAIKDSGYIPNTDVVLHD 560
F+ G + R Y L + + DS ++ +V D
Sbjct: 855 VFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVRGVEVEEED 898
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 160/321 (49%), Gaps = 3/321 (0%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
S L+ +Y+ R E+ RVFQ E S W A+ G +N L AL +++M +
Sbjct: 219 SALLDMYAKGKRFVESLRVFQGIPEKNSVS-WSAIIAGCVQNNLLSLALKFFKEMQKVNA 277
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR 223
++ L++C + + R+G +HA K D AD +V A L Y +C D
Sbjct: 278 GVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI 337
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLT 283
+F+ N S+N +I G+S + F+ L F + + G+GF I+L+ V CA +
Sbjct: 338 LFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRL-MSSGLGFDEISLSGVFRACALVK 396
Query: 284 ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLA 343
L G +I+G +KS D + NA +DMY KC ++ +VFD M +D SWN ++A
Sbjct: 397 GLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIA 456
Query: 344 GYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQP 403
+ NG+ + + LF M+RS I PD TF S+L C+ G G + + + G+
Sbjct: 457 AHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMAS 515
Query: 404 SLEHYACLVDILGRSGKLDEA 424
+ L+D+ + G ++EA
Sbjct: 516 NSSVGCSLIDMYSKCGMIEEA 536
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 177/378 (46%), Gaps = 25/378 (6%)
Query: 67 SQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDE 126
+ +L C + L G +LH H L K + +++ + +Y+ C + +A+ +F D
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHAL--KSDFAADGIVRTATLDMYAKCDNMQDAQILF-DN 341
Query: 127 EEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVG 186
E+ + AM GYS+ +ALL++ +++ + + S +AC V G
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQ 246
I+ K D V NA + Y +C + RVF+ M +R+ VSWN +IA
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQN 461
Query: 247 GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPL 306
GK +ETL F +M L+ + T ++L C +L G EIH IVKSG ++ +
Sbjct: 462 GKGYETLFLFVSM-LRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSV 519
Query: 307 LNALMDMYAKCGSIGYCKKV----------------FDGMESKDL----TSWNTMLAGYS 346
+L+DMY+KCG I +K+ + M +K L SWN++++GY
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 579
Query: 347 INGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLE 406
+ Q E A LF M+ I PD T+ ++L C++ G++ + +Q +
Sbjct: 580 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 639
Query: 407 HYACLVDILGRSGKLDEA 424
+ LVD+ + G L ++
Sbjct: 640 ICSTLVDMYSKCGDLHDS 657
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 193/422 (45%), Gaps = 44/422 (10%)
Query: 65 DISQLLHLCISRKSLEHGQKLHQHLLHSKGR------------------------VIENP 100
+ S + C + +LE G++ H H++ S R V +
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 101 TLK-----SKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSKEALL 153
L+ +K+I YS + +A F P V W +M GY +N S +++
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMM---PVRDVVSWNSMLSGYLQNGESLKSIE 166
Query: 154 VYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYV 213
V+ DM +E F++ LK C+ + D+ +G IH + + + D V +ALL Y
Sbjct: 167 VFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYA 226
Query: 214 ECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLT 273
+ + LRVF+ +P++N VSW+ +IAG + L F+ MQ K G S
Sbjct: 227 KGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ-KVNAGVSQSIYA 285
Query: 274 TVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK 333
+VL CA L+ L G ++H +KS AD + A +DMYAKC ++ + +FD E+
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
+ S+N M+ GYS KA+ LF ++ S + D I+ + C+ SEG + +
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 394 NLMQDYGVQPSLEHYACL----VDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRL 449
L ++ SL C+ +D+ G+ L EA V M + + S W +++ +
Sbjct: 406 GL----AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAAHEQ 460
Query: 450 DG 451
+G
Sbjct: 461 NG 462
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 104/250 (41%), Gaps = 32/250 (12%)
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV 221
SV NF+F K C G +G+ HA + V N LL+ Y
Sbjct: 45 SVSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSA 102
Query: 222 LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL-------------------- 261
VF+ MP R+VVSWN +I G+S +F+ F M +
Sbjct: 103 SMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESL 162
Query: 262 ----------KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALM 311
+EG+ F T +L +C+ L G +IHG +V+ G D +AL+
Sbjct: 163 KSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALL 222
Query: 312 DMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGI 371
DMYAK +VF G+ K+ SW+ ++AG N + A+ F EM + N
Sbjct: 223 DMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS 282
Query: 372 TFVSLLSGCS 381
+ S+L C+
Sbjct: 283 IYASVLRSCA 292
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 35/236 (14%)
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI------- 320
S + V CA+ AL GK+ H ++ SG + +LN L+ +Y
Sbjct: 47 STTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVF 106
Query: 321 ----------------GYCKK--------VFDGMESKDLTSWNTMLAGYSINGQIEKAID 356
GY K F+ M +D+ SWN+ML+GY NG+ K+I+
Sbjct: 107 DKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIE 166
Query: 357 LFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILG 416
+F +M R I DG TF +L CS TS G + ++ G + + L+D+
Sbjct: 167 VFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYA 226
Query: 417 RSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAG 472
+ + E+L V + +P K S S W +++ C + +SL A + E++ NAG
Sbjct: 227 KGKRFVESLRVFQGIPEKNSVS-WSAIIAGCVQNNLLSL---ALKFFKEMQKVNAG 278
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/509 (33%), Positives = 275/509 (54%), Gaps = 16/509 (3%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKS----LEHGQKLHQHL 89
N + +SG+ E+AL L + ++ +S L + IS S LE G+++H+
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVS--LTVAISACSRLLWLERGKEIHRKC 234
Query: 90 LHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRL 147
+ KG ++ + S L+ +Y C L+ AR VFQ + P +S+ W +M GY
Sbjct: 235 V-KKGFELDE-YVNSALVDMYGKCDCLEVAREVFQ---KMPRKSLVAWNSMIKGYVAKGD 289
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNA 207
SK + + M+ P + L AC+ + G+ IH + + AD VN +
Sbjct: 290 SKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCS 349
Query: 208 LLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
L+ Y +CG + VF + SWN +I+ + G F+ ++ + M + G+
Sbjct: 350 LIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM-VSVGVKP 408
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF 327
+T T+VLP C+QL AL GK+IH I +S + D LL+AL+DMY+KCG+ ++F
Sbjct: 409 DVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIF 468
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
+ + KD+ SW M++ Y +GQ +A+ FDEM + ++PDG+T +++LS C H+GL
Sbjct: 469 NSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLID 528
Query: 388 EGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMP-MKLSGSIWGSLLN 445
EG KFF+ M+ YG++P +EHY+C++DILGR+G+L EA + + P + + +L +
Sbjct: 529 EGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFS 588
Query: 446 SCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
+C L SL + A L E P++A Y++L N+YA W+ +RVR M G++K
Sbjct: 589 ACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKK 648
Query: 506 AGCSWIQIKQRIHTFVAGGSSDFRSSAEY 534
GCSWI++ ++ F A S R+ Y
Sbjct: 649 PGCSWIEMSDKVCHFFAEDRSHLRAENVY 677
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 192/386 (49%), Gaps = 6/386 (1%)
Query: 69 LLHLCI-SRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEE 127
LL C S KSL + +HQ +L R + L LI +Y C AR VF++ +
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLR--RDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 128 EDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV-EPGNFAFSVALKACTDVGDSRVG 186
+W ++ GYS+N + + L V++ +L S+ P +F F +KA +G +G
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQ 246
R IH + K D VV ++L+ Y + + L+VF+ MP+R+V SWNT+I+ F
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 247 GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPL 306
G+ + L+ F M+ G + ++LT + C++L L GKEIH + VK G + D +
Sbjct: 187 GEAEKALELFGRME-SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI 366
+AL+DMY KC + ++VF M K L +WN+M+ GY G + +++ + MI
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 367 RPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALT 426
RP T S+L CS S G+ + V + L+D+ + G+ + A T
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 427 VARNMPMKLSGSIWGSLLNSCRLDGN 452
V ++ S W +++S GN
Sbjct: 366 VFSKTQKDVAES-WNVMISSYISVGN 390
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 211/418 (50%), Gaps = 5/418 (1%)
Query: 88 HLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRL 147
H L K + + + S L+ +Y+ + + +VF DE + + W + + ++
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVF-DEMPERDVASWNTVISCFYQSGE 188
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNA 207
+++AL ++ M + EP + + +VA+ AC+ + G+ IH + K+ E D+ VN+A
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 208 LLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
L+ Y +C C VF+ MP++++V+WN++I G+ +G ++ M + EG
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMII-EGTRP 307
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF 327
S TLT++L C++ L GK IHG +++S AD + +L+D+Y KCG + VF
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
+ SWN M++ Y G KA++++D+M+ ++PD +TF S+L CS
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
Query: 388 EGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
+G++ + + ++ + L+D+ + G EA + ++P K S W ++++
Sbjct: 428 KGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS-WTVMISAY 486
Query: 448 RLDGN--VSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIK 503
G +L + + F ++P+ +LS + EG+K +M + GI+
Sbjct: 487 GSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 255/455 (56%), Gaps = 42/455 (9%)
Query: 134 VWVAMAIGYSRNRLSKEALLVYRDML--ARSVEPGNFAFSVALKACTDVGDSRVGRAIHA 191
VW + G+SR+ + A+ ++ DML + SV+P + KA +G +R GR +H
Sbjct: 91 VWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 192 QLAKRDEEADQVVNNALLRFYVECGCSGDVLRVF-------------------------- 225
+ K E D + N +L YV CGC + R+F
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQ 210
Query: 226 -----EVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM--GFSWITLTTVLPI 278
+ MPQRN VSWN++I+GF G+ + LD FR MQ K+ GF T+ ++L
Sbjct: 211 AQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF---TMVSLLNA 267
Query: 279 CAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSW 338
CA L A G+ IH IV++ + + ++ AL+DMY KCG I VF+ K L+ W
Sbjct: 268 CAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCW 327
Query: 339 NTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD 398
N+M+ G + NG E+A+DLF E+ RS + PD ++F+ +L+ C+HSG +FF LM++
Sbjct: 328 NSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKE 387
Query: 399 -YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAE 457
Y ++PS++HY +V++LG +G L+EA + +NMP++ IW SLL++CR GNV +A+
Sbjct: 388 KYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAK 447
Query: 458 TAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRI 517
AA+ L +++P+ YV+LSN YA G++E R +M R ++K+ GCS I++ +
Sbjct: 448 RAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEV 507
Query: 518 HTFVAGGSSDFRSSAEY--LKIWNALSNAIKDSGY 550
H F++ G + +S+ Y L I N + IK SG+
Sbjct: 508 HEFISCGGTHPKSAEIYSLLDILNWDVSTIK-SGF 541
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 135/306 (44%), Gaps = 46/306 (15%)
Query: 178 TDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV---LRVFEVMPQRNVV 234
T R + IHA L K +D V + +L F C D+ VF + +N
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFC--CASPSDMNYAYLVFTRINHKNPF 90
Query: 235 SWNTLIAGFSGQGKVFETLDAFRAMQLKE-GMGFSWITLTTVLPICAQLTALHSGKEIHG 293
WNT+I GFS + F M + +T +V +L G+++HG
Sbjct: 91 VWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 294 QIVKSGKKADRPLLNALMDMY-------------------------------AKCGSIGY 322
++K G + D + N ++ MY AKCG I
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQ 210
Query: 323 CKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSH 382
+ +FD M ++ SWN+M++G+ NG+ + A+D+F EM +++PDG T VSLL+ C++
Sbjct: 211 AQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAY 270
Query: 383 SGLTSEGQKFFNLMQDYGVQPSLEH----YACLVDILGRSGKLDEALTVARNMPMKLSGS 438
G + +G+ + +Y V+ E L+D+ + G ++E L V P K S
Sbjct: 271 LGASEQGR----WIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK-QLS 325
Query: 439 IWGSLL 444
W S++
Sbjct: 326 CWNSMI 331
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 38/300 (12%)
Query: 27 NHKPPPL-NPTLKSLCKSGKLEEALR-----LIESPNPTPY---------------QDED 65
NHK P + N ++ +S E A+ L SP+ P Q D
Sbjct: 85 NHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARD 144
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLH---SKGRVIE-----------NPTLKSKLITLYS 111
QL H + ++ LE + +LH + G +IE + + +I ++
Sbjct: 145 GRQL-HGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFA 203
Query: 112 VCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFS 171
CG +D+A+ +F DE W +M G+ RN K+AL ++R+M + V+P F
Sbjct: 204 KCGLIDQAQNLF-DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMV 262
Query: 172 VALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR 231
L AC +G S GR IH + + E + +V AL+ Y +CGC + L VFE P++
Sbjct: 263 SLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK 322
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
+ WN++I G + G +D F ++ + G+ ++ VL CA +H E
Sbjct: 323 QLSCWNSMILGLANNGFEERAMDLFSELE-RSGLEPDSVSFIGVLTACAHSGEVHRADEF 381
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 282/543 (51%), Gaps = 42/543 (7%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
+L C S + G ++H ++ S + N ++S LI +Y+ C ++ AR + + E
Sbjct: 233 VLTACASVSACRVGVQVHCCIVKSGFKT--NIYVQSALIDMYAKCREMESARALLEGMEV 290
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKA-CTDVGDSRVGR 187
D S W +M +G R L EAL ++ M R ++ +F L + ++
Sbjct: 291 DDVVS-WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIAS 349
Query: 188 AIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQG 247
+ H + K ++VNNAL+ Y + G L+VFE M +++V+SW L+ G + G
Sbjct: 350 SAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNG 409
Query: 248 KVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL 307
E L F M++ G+ I +VL A+LT L G+++HG +KSG + +
Sbjct: 410 SYDEALKLFCNMRVG-GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVN 468
Query: 308 NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIR 367
N+L+ MY KCGS+ E A +F+ M IR
Sbjct: 469 NSLVTMYTKCGSL-------------------------------EDANVIFNSM---EIR 494
Query: 368 PDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALT 426
D IT+ L+ G + +GL + Q++F+ M+ YG+ P EHYAC++D+ GRSG +
Sbjct: 495 -DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQ 553
Query: 427 VARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGM 486
+ M ++ ++W ++L + R GN+ E AA+ L E+EPNNA YV LSN+Y+ AG
Sbjct: 554 LLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGR 613
Query: 487 WEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIK 546
+ VR +M R I K+ GCSW++ K ++H+F++ R Y K+ + + IK
Sbjct: 614 QDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKV-DEMMLLIK 672
Query: 547 DSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHS 606
++GY + LHD+++E K + + HSE+LA F L+ +G PIRI KNLRVC DCHS
Sbjct: 673 EAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHS 732
Query: 607 WMK 609
MK
Sbjct: 733 AMK 735
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 192/405 (47%), Gaps = 8/405 (1%)
Query: 34 NPTLKSLCKSGKLEEALRL---IESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLL 90
N + CKSG EA L ++S P + + +L +C S L G+++H H +
Sbjct: 94 NALISGYCKSGSKVEAFNLFWEMQSDGIKP-NEYTLGSVLRMCTSLVLLLRGEQIHGHTI 152
Query: 91 HSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKE 150
+ + N + + L+ +Y+ C R+ EA +F+ E + W +M GYS+N + +
Sbjct: 153 KTGFDLDVN--VVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFK 210
Query: 151 ALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLR 210
A+ +RD+ + + F L AC V RVG +H + K + + V +AL+
Sbjct: 211 AIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALID 270
Query: 211 FYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWI 270
Y +C + E M +VVSWN++I G QG + E L F M ++ M
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERD-MKIDDF 329
Query: 271 TLTTVLPICA-QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDG 329
T+ ++L A T + H IVK+G + + NAL+DMYAK G + KVF+G
Sbjct: 330 TIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEG 389
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG 389
M KD+ SW ++ G + NG ++A+ LF M I PD I S+LS + L G
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFG 449
Query: 390 QKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
Q+ G SL LV + + G L++A + +M ++
Sbjct: 450 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR 494
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 179/381 (46%), Gaps = 45/381 (11%)
Query: 84 KLHQHLL----HSKGRVIENPTLKSKL-----------ITLYSVCGRLDEARRVFQDEEE 128
KLH +LL GRV E + K+ I YS RL +A ++F+
Sbjct: 28 KLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRS--- 84
Query: 129 DPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVG 186
+P ++ W A+ GY ++ EA ++ +M + ++P + L+ CT + G
Sbjct: 85 NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRG 144
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMP-QRNVVSWNTLIAGFSG 245
IH K + D V N LL Y +C + +FE M ++N V+W +++ G+S
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
G F+ ++ FR ++ +EG + T +VL CA ++A G ++H IVKSG K +
Sbjct: 205 NGFAFKAIECFRDLR-REGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIY 263
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
+ +AL+DMYAKC + + + +GME D+ SWN+M+ G G I +A+ +F M +
Sbjct: 264 VQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERD 323
Query: 366 IRPDGITFVSLL------------SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVD 413
++ D T S+L + +H + G + L+ + LVD
Sbjct: 324 MKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN-----------ALVD 372
Query: 414 ILGRSGKLDEALTVARNMPMK 434
+ + G +D AL V M K
Sbjct: 373 MYAKRGIMDSALKVFEGMIEK 393
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 102/275 (37%), Gaps = 46/275 (16%)
Query: 280 AQLTALHSGKEIHGQIVKSGK------------KADRPLLNALMDMYAKCGSIGYCKKVF 327
A T LHS + G + KSG+ + D N ++ Y+ + +K+F
Sbjct: 24 ADRTKLHSNL-LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLF 82
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
K+ SWN +++GY +G +A +LF EM I+P+ T S+L C+ L
Sbjct: 83 RSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLL 142
Query: 388 EGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
G++ G + L+ + + ++ EA + M + + W S+L
Sbjct: 143 RGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGY 202
Query: 448 RLDGNVSLAETAAERLFEIEPNNAGNYVMLS----------------------------N 479
+G + R E N + Y S N
Sbjct: 203 SQNG-FAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTN 261
Query: 480 IYADAGMWEGVKRVREMMAIR----GIKKDAGCSW 510
IY + + + + REM + R G++ D SW
Sbjct: 262 IYVQSALIDMYAKCREMESARALLEGMEVDDVVSW 296
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 218/363 (60%), Gaps = 2/363 (0%)
Query: 168 FAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEV 227
+ S A+++C D R G H K +D + ++L+ Y + G + +VFE
Sbjct: 121 YGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEE 180
Query: 228 MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHS 287
MP+RNVVSW +I+GF+ + +V L + M+ K + T T +L C AL
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMR-KSTSDPNDYTFTALLSACTGSGALGQ 239
Query: 288 GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSI 347
G+ +H Q + G K+ + N+L+ MY KCG + ++FD +KD+ SWN+M+AGY+
Sbjct: 240 GRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQ 299
Query: 348 NGQIEKAIDLFDEMI-RSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLE 406
+G +AI+LF+ M+ +S +PD IT++ +LS C H+GL EG+KFFNLM ++G++P L
Sbjct: 300 HGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELN 359
Query: 407 HYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEI 466
HY+CLVD+LGR G L EAL + NMPMK + IWGSLL SCR+ G+V AAE +
Sbjct: 360 HYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLML 419
Query: 467 EPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSS 526
EP+ A +V L+N+YA G W+ VR++M +G+K + GCSWI+I + F A S
Sbjct: 420 EPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGS 479
Query: 527 DFR 529
+ R
Sbjct: 480 NCR 482
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 9/321 (2%)
Query: 88 HLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRN 145
H L KG I + L S L+ LY G ++ A +VF EE P +V W AM G+++
Sbjct: 143 HCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF---EEMPERNVVSWTAMISGFAQE 199
Query: 146 RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN 205
L +Y M + +P ++ F+ L ACT G GR++H Q ++ ++
Sbjct: 200 WRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHIS 259
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
N+L+ Y +CG D R+F+ ++VVSWN++IAG++ G + ++ F M K G
Sbjct: 260 NSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGT 319
Query: 266 GFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKK 325
IT VL C + G++ + + G K + + L+D+ + G + +
Sbjct: 320 KPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALE 379
Query: 326 VFDGMESK-DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPD-GITFVSLLSGCSHS 383
+ + M K + W ++L ++G + I +E R + PD T V L + +
Sbjct: 380 LIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEE--RLMLEPDCAATHVQLANLYASV 437
Query: 384 GLTSEGQKFFNLMQDYGVQPS 404
G E LM+D G++ +
Sbjct: 438 GYWKEAATVRKLMKDKGLKTN 458
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 11/250 (4%)
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
++G F L++ + C +G H +K G +D L ++L+ +Y G +
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
KVF+ M +++ SW M++G++ +++ + L+ +M +S P+ TF +LLS C+
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 382 HSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWG 441
SG +G+ G++ L L+ + + G L +A + K S W
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS-WN 291
Query: 442 SLLNSCRLDGNVSLAETAAERLFEIEPNNAG------NYVMLSNIYADAGMWEGVKRVRE 495
S++ G LA A E LFE+ +G Y+ + + AG+ + ++
Sbjct: 292 SMIAGYAQHG---LAMQAIE-LFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFN 347
Query: 496 MMAIRGIKKD 505
+MA G+K +
Sbjct: 348 LMAEHGLKPE 357
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/539 (30%), Positives = 278/539 (51%), Gaps = 65/539 (12%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLL-- 90
LN L +G EEALRL + N + ++ +L C ++L+ G+++H +L
Sbjct: 158 LNSLLHGYILNGYAEEALRLFKELNFSA-DAITLTTVLKACAELEALKCGKQIHAQILIG 216
Query: 91 -----HSKGRVIENPTLK----------------------SKLITLYSVCGRLDEARRVF 123
+ N K S LI+ Y+ CGR++E+R +F
Sbjct: 217 GVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLF 276
Query: 124 QDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS 183
D + + +W +M GY N + EAL+++ +M + E + + AC +G
Sbjct: 277 -DRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSR-TLAAVINACIGLGFL 334
Query: 184 RVGRAIHA-------------------------------QLAKRDEEADQVVNNALLRFY 212
G+ +H +L E D ++ N++++ Y
Sbjct: 335 ETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVY 394
Query: 213 VECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
CG D RVFE + ++++SWN++ GFS G ETL+ F M K + ++L
Sbjct: 395 FSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH-KLDLPTDEVSL 453
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES 332
++V+ CA +++L G+++ + G +D+ + ++L+D+Y KCG + + ++VFD M
Sbjct: 454 SSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK 513
Query: 333 KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKF 392
D WN+M++GY+ NGQ +AIDLF +M + IRP ITF+ +L+ C++ GL EG+K
Sbjct: 514 SDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Query: 393 FNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG 451
F M+ D+G P EH++C+VD+L R+G ++EA+ + MP + GS+W S+L C +G
Sbjct: 574 FESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANG 633
Query: 452 NVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSW 510
++ + AAE++ E+EP N+ YV LS I+A +G WE VR++M + K+ G SW
Sbjct: 634 YKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 166/388 (42%), Gaps = 77/388 (19%)
Query: 68 QLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEE 127
+LL C SR E + LL KG + + + L+ +YS G++ AR +F DE
Sbjct: 31 RLLQSCSSRNR-ETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLF-DEM 88
Query: 128 EDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGR 187
D W M GY N K L + DM+ E ++++V + G+ V R
Sbjct: 89 PDRNYFSWNTMIEGY-MNSGEKGTSLRFFDMMP---ERDGYSWNVVVSGFAKAGELSVAR 144
Query: 188 AIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQG 247
R+F MP+++VV+ N+L+ G+ G
Sbjct: 145 -----------------------------------RLFNAMPEKDVVTLNSLLHGYILNG 169
Query: 248 KVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL 307
E L F+ + ITLTTVL CA+L AL GK+IH QI+ G + D +
Sbjct: 170 YAEEALRLFKELNFSADA----ITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMN 225
Query: 308 NALMDMYAKCGSI-----------------------GY--CKKV------FDGMESKDLT 336
++L+++YAKCG + GY C +V FD ++ +
Sbjct: 226 SSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI 285
Query: 337 SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM 396
WN+M++GY N +A+ LF+EM R+ R D T ++++ C G G++
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 397 QDYGVQPSLEHYACLVDILGRSGKLDEA 424
+G+ + + L+D+ + G EA
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEA 372
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 289 KEIHGQIVKSGKKADRPLL-NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSI 347
++ +G ++K G + ++ N L+ MY++ G +G + +FD M ++ SWNTM+ GY
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 348 NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM--QDYGVQPSL 405
+G+ ++ FD M DG ++ ++SG + +G S ++ FN M +D SL
Sbjct: 106 SGEKGTSLRFFDMMPER----DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSL 161
Query: 406 EHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
H L +G +EAL + + + ++L +C
Sbjct: 162 LHGYIL------NGYAEEALRLFKELNFSADAITLTTVLKAC 197
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 256/488 (52%), Gaps = 11/488 (2%)
Query: 34 NPTLKSLCKSGKLEEALRLIE--SPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLH 91
N + ++G + +AL + + I +L +C K LE G+ +H+ L
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK--LV 244
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
+ R+ + +K+ L+ +Y CGR+DEAR VF D E W M GY+ + + A
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVF-DRMERRDVITWTCMINGYTEDGDVENA 303
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
L + R M V P + + C D G+ +H ++ +D ++ +L+
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISM 363
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
Y +C RVF + + W+ +IAG V + L F+ M+ +E + + T
Sbjct: 364 YAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMR-REDVEPNIAT 422
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME 331
L ++LP A L L IH + K+G + L+ +Y+KCG++ K+F+G++
Sbjct: 423 LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 332 ----SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
SKD+ W +++GY ++G A+ +F EM+RS + P+ ITF S L+ CSHSGL
Sbjct: 483 EKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVE 542
Query: 388 EGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
EG F M + Y HY C+VD+LGR+G+LDEA + +P + + ++WG+LL +
Sbjct: 543 EGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Query: 447 CRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
C NV L E AA +LFE+EP N GNYV+L+NIYA G W+ +++VR MM G++K
Sbjct: 603 CVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKP 662
Query: 507 GCSWIQIK 514
G S I+I+
Sbjct: 663 GHSTIEIR 670
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 209/411 (50%), Gaps = 18/411 (4%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
LL+ + +S+ + LH H++ + GRV + + S L Y++CG + AR++F E
Sbjct: 21 LLNHFAATQSISKTKALHCHVI-TGGRV--SGHILSTLSVTYALCGHITYARKLF----E 73
Query: 129 DPPESVWVAMAI---GYSRNRLSKEALLVYRDMLARSVE--PGNFAFSVALKACTDVGDS 183
+ P+S ++ I Y R L +A+ V+ M++ V+ P + + KA ++
Sbjct: 74 EMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSM 133
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
++G +H ++ + D+ V NALL Y+ G VF+VM R+V+SWNT+I+G+
Sbjct: 134 KLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGY 193
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKAD 303
G + + L F M + E + T+ ++LP+C L L G+ +H ++V+ + D
Sbjct: 194 YRNGYMNDALMMFDWM-VNESVDLDHATIVSMLPVCGHLKDLEMGRNVH-KLVEEKRLGD 251
Query: 304 R-PLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMI 362
+ + NAL++MY KCG + + VFD ME +D+ +W M+ GY+ +G +E A++L M
Sbjct: 252 KIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQ 311
Query: 363 RSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLD 422
+RP+ +T SL+S C + ++G+ V + L+ + + ++D
Sbjct: 312 FEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVD 371
Query: 423 EALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLF--EIEPNNA 471
V +G W +++ C + VS A +R+ ++EPN A
Sbjct: 372 LCFRVFSGASKYHTGP-WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIA 421
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 186/381 (48%), Gaps = 11/381 (2%)
Query: 77 KSLEHGQKLHQHLLHS-KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVW 135
KS++ G +H +L S GR + +++ L+ +Y G+++ AR VF D ++ W
Sbjct: 131 KSMKLGLVVHGRILRSWFGR---DKYVQNALLAMYMNFGKVEMARDVF-DVMKNRDVISW 186
Query: 136 VAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAK 195
M GY RN +AL+++ M+ SV+ + L C + D +GR +H +L +
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVH-KLVE 245
Query: 196 RDEEADQV-VNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLD 254
D++ V NAL+ Y++CG + VF+ M +R+V++W +I G++ G V L+
Sbjct: 246 EKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALE 305
Query: 255 AFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMY 314
R MQ EG+ + +T+ +++ +C ++ GK +HG V+ +D + +L+ MY
Sbjct: 306 LCRLMQF-EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
Query: 315 AKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFV 374
AKC + C +VF G W+ ++AG N + A+ LF M R ++ P+ T
Sbjct: 365 AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLN 424
Query: 375 SLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
SLL + + + G SL+ LV + + G L+ A + + K
Sbjct: 425 SLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Query: 435 LSGS---IWGSLLNSCRLDGN 452
+WG+L++ + G+
Sbjct: 485 HKSKDVVLWGALISGYGMHGD 505
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 248/447 (55%), Gaps = 8/447 (1%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
L+ C +L G+ H L+ K + + L + L+ +Y CG + ARRVF +E
Sbjct: 248 LIMACTKLSALHQGKWFHGCLV--KSGIELSSCLVTSLLDMYVKCGDISNARRVF-NEHS 304
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRA 188
+W AM +GY+ N EAL +++ M ++P + L C + + +GR+
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364
Query: 189 IHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGK 248
+H L+ + D V NAL+ Y +C + D VFE+ ++++V+WN++I+GFS G
Sbjct: 365 VHG-LSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS 423
Query: 249 VFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL- 307
+ E L F M E + + +T+ ++ CA L +L G +H VK G A +
Sbjct: 424 IHEALFLFHRMN-SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHV 482
Query: 308 -NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI 366
AL+D YAKCG + +FD +E K+ +W+ M+ GY G +++LF+EM++
Sbjct: 483 GTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ 542
Query: 367 RPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEAL 425
+P+ TF S+LS C H+G+ +EG+K+F+ M +DY PS +HY C+VD+L R+G+L++AL
Sbjct: 543 KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQAL 602
Query: 426 TVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAG 485
+ MP++ +G+ L+ C + L E +++ ++ P++A YV++SN+YA G
Sbjct: 603 DIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDG 662
Query: 486 MWEGVKRVREMMAIRGIKKDAGCSWIQ 512
W K VR +M RG+ K AG S ++
Sbjct: 663 RWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 151/280 (53%), Gaps = 3/280 (1%)
Query: 101 TLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
++ +KL++LY G +AR VF D+ +P +W M Y N+ S E + +Y ++
Sbjct: 77 SIATKLVSLYGFFGYTKDARLVF-DQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMK 135
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
+ FS ALKACT++ D G+ IH QL K D VV LL Y +CG
Sbjct: 136 HGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKV-PSFDNVVLTGLLDMYAKCGEIKS 194
Query: 221 VLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICA 280
+VF + RNVV W ++IAG+ E L F M+ +G + T T++ C
Sbjct: 195 AHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEY-TYGTLIMACT 253
Query: 281 QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNT 340
+L+ALH GK HG +VKSG + L+ +L+DMY KCG I ++VF+ DL W
Sbjct: 254 KLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTA 313
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGC 380
M+ GY+ NG + +A+ LF +M I+P+ +T S+LSGC
Sbjct: 314 MIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 191/387 (49%), Gaps = 10/387 (2%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPYQDEDI--SQLLHLCISRKSLEHGQKLHQHLLHSKG 94
L+ C + + E ++L + ++ +DI S+ L C + L++G+K+H L+ K
Sbjct: 114 LRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV--KV 171
Query: 95 RVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLV 154
+N L + L+ +Y+ CG + A +VF D W +M GY +N L +E L++
Sbjct: 172 PSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNV-VCWTSMIAGYVKNDLCEEGLVL 229
Query: 155 YRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVE 214
+ M +V + + + ACT + G+ H L K E + +LL YV+
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVK 289
Query: 215 CGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
CG + RVF ++V W +I G++ G V E L F+ M+ E + + +T+ +
Sbjct: 290 CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCVTIAS 348
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKD 334
VL C + L G+ +HG +K G D + NAL+ MYAKC K VF+ KD
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKD 407
Query: 335 LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKF-- 392
+ +WN++++G+S NG I +A+ LF M ++ P+G+T SL S C+ G + G
Sbjct: 408 IVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHA 467
Query: 393 FNLMQDYGVQPSLEHYACLVDILGRSG 419
+++ + S+ L+D + G
Sbjct: 468 YSVKLGFLASSSVHVGTALLDFYAKCG 494
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 180/400 (45%), Gaps = 22/400 (5%)
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNV 233
L CT++ DS R H L D + L+ Y G + D VF+ +P+ +
Sbjct: 51 LSKCTNI-DSL--RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDF 107
Query: 234 VSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHG 293
W ++ + + E + + + +K G + I + L C +L L +GK+IH
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLL-MKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 294 QIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEK 353
Q+VK D +L L+DMYAKCG I KVF+ + +++ W +M+AGY N E+
Sbjct: 167 QLVKV-PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 354 AIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVD 413
+ LF+ M +N+ + T+ +L+ C+ +G+ F + G++ S L+D
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 414 ILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERL--FEIEPNNA 471
+ + G + A V N + +W +++ +G+V+ A + +++ EI+PN
Sbjct: 286 MYVKCGDISNARRVF-NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC- 343
Query: 472 GNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQR-IHTFVA-----GGS 525
V ++++ + G+ E ++ R ++ G+ G + +H +
Sbjct: 344 ---VTIASVLSGCGLIENLELGR---SVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAK 397
Query: 526 SDFRSSAEY-LKIWNALSNAIKDSGYIPNTDVVLHDINEE 564
F +E + WN++ + +G I + H +N E
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSE 437
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 87/216 (40%), Gaps = 13/216 (6%)
Query: 221 VLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICA 280
+LR + P R GF + F T+ + +G + + + +
Sbjct: 1 MLRSITLSPTRRF--------GFPPRCVSFTTIKELILTEENDGSSLHYAASSPCFLLLS 52
Query: 281 QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNT 340
+ T + S ++ HG + +G D + L+ +Y G + VFD + D W
Sbjct: 53 KCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKV 112
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
ML Y +N + + + L+D +++ R D I F L C+ G+K +
Sbjct: 113 MLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKV- 171
Query: 401 VQPSLEHYAC--LVDILGRSGKLDEALTVARNMPMK 434
PS ++ L+D+ + G++ A V ++ ++
Sbjct: 172 --PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR 205
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 180/569 (31%), Positives = 284/569 (49%), Gaps = 55/569 (9%)
Query: 30 PPPLNPTLKSLCKSGKLEEAL----RLIES---PNPTPYQDEDISQLLHLCISRKSLEHG 82
P P N + S K+ EE + R++ P+ Y +L C + G
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYP-----SVLKACGETLDVAFG 163
Query: 83 QKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGY 142
+ +H + S + + + + LI++Y + ARR+F E S W A+ Y
Sbjct: 164 RVVHGSIEVSSYK--SSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVS-WNAVINCY 220
Query: 143 SRNRLSKEALLVYRDMLARSVE---------------PGNF------------------- 168
+ + EA ++ M VE GN+
Sbjct: 221 ASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDP 280
Query: 169 -AFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEV 227
A + LKAC+ +G R+G+ IH + V N L+ Y +C L VF
Sbjct: 281 VAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQ 340
Query: 228 MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHS 287
+ ++ +WN++I+G++ K E R M L G + ITL ++LP+CA++ L
Sbjct: 341 TEENSLCTWNSIISGYAQLNKSEEASHLLREM-LVAGFQPNSITLASILPLCARIANLQH 399
Query: 288 GKEIHGQIVKSGKKADRPLL-NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYS 346
GKE H I++ D +L N+L+D+YAK G I K+V D M +D ++ +++ GY
Sbjct: 400 GKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYG 459
Query: 347 INGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ-DYGVQPSL 405
G+ A+ LF EM RS I+PD +T V++LS CSHS L EG++ F MQ +YG++P L
Sbjct: 460 NQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCL 519
Query: 406 EHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE 465
+H++C+VD+ GR+G L +A + NMP K SG+ W +LLN+C + GN + + AAE+L E
Sbjct: 520 QHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLE 579
Query: 466 IEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGS 525
++P N G YV+++N+YA AG W + VR +M G+KKD GC+WI F G +
Sbjct: 580 MKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDT 639
Query: 526 SDFRSSAEYLKIWNALSNAIKD-SGYIPN 553
S + Y + + L+ +KD +GY N
Sbjct: 640 SSPEACNTY-PLLDGLNQLMKDNAGYAIN 667
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 226/521 (43%), Gaps = 60/521 (11%)
Query: 33 LNPTLKSLCKSGKLEEALR---LIESPNPTPYQDEDI----SQLLHLCISRKSLEHGQKL 85
L +L L G L +A + L+ + + D+ + + LL C+ ++ G ++
Sbjct: 6 LFKSLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQV 65
Query: 86 HQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRN 145
H H + S V + L KL+T YS +EA+ + ++ + P W + Y++N
Sbjct: 66 HAHCISSG--VEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLP-WNVLIASYAKN 122
Query: 146 RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN 205
L +E + Y+ M+++ + P F + LKAC + D GR +H + ++ V
Sbjct: 123 ELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVC 182
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
NAL+ Y G R+F+ M +R+ VSWN +I ++ +G E + F M G+
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWF-SGV 241
Query: 266 GFSWITLTTV-----------------------------------LPICAQLTALHSGKE 290
S IT + L C+ + A+ GKE
Sbjct: 242 EVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKE 301
Query: 291 IHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQ 350
IHG + S + N L+ MY+KC + + VF E L +WN++++GY+ +
Sbjct: 302 IHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK 361
Query: 351 IEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF------NLMQDYGVQPS 404
E+A L EM+ + +P+ IT S+L C+ G++F +DY +
Sbjct: 362 SEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML-- 419
Query: 405 LEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC--RLDGNVSLAETAAER 462
+ LVD+ +SGK+ A V+ M K + SL++ + +G V+LA
Sbjct: 420 ---WNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGEGGVALALFKEMT 475
Query: 463 LFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIK 503
I+P++ +LS + EG + +M GI+
Sbjct: 476 RSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIR 516
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 237/416 (56%), Gaps = 9/416 (2%)
Query: 99 NPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL-LVYRD 157
N + S L LY V +ARRVF DE +P W A+ +S+N L +EAL L Y
Sbjct: 197 NHFISSTLAYLYGVNREPVDARRVF-DEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAM 255
Query: 158 MLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGC 217
+ + P F L AC ++ + G+ IH +L ++ VV ++LL Y +CG
Sbjct: 256 HRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGS 315
Query: 218 SGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLP 277
+ +VF M ++N VSW+ L+ G+ G+ + ++ FR M+ K+ F TVL
Sbjct: 316 VREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFG-----TVLK 370
Query: 278 ICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTS 337
CA L A+ GKEIHGQ V+ G + + +AL+D+Y K G I +V+ M +++ +
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT 430
Query: 338 WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM- 396
WN ML+ + NG+ E+A+ F++M++ I+PD I+F+++L+ C H+G+ EG+ +F LM
Sbjct: 431 WNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMA 490
Query: 397 QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVS-L 455
+ YG++P EHY+C++D+LGR+G +EA + + S+WG LL C + + S +
Sbjct: 491 KSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRV 550
Query: 456 AETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWI 511
AE A+R+ E+EP +YV+LSN+Y G +R++M RG+ K G SWI
Sbjct: 551 AERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 215/424 (50%), Gaps = 11/424 (2%)
Query: 31 PPLNPTLKSLCKSGKLEEALRLIESPNPT--PYQDEDISQLLHLCISRKSLEHGQKLHQH 88
P + LCK G+L EA+R++ S + + P + + LL C S HG + H H
Sbjct: 27 PTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAH 86
Query: 89 LLHSKGRVIENPTLKSKLITLYSVCG-RLDEARRVFQDEEEDPPESVWVAMAIGYSRNRL 147
++ S N + + L++LY G + E RRVF S W +M GY +
Sbjct: 87 VVKSGLETDRN--VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAIS-WTSMMSGYVTGKE 143
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNA 207
+AL V+ +M++ ++ F S A+KAC+++G+ R+GR H + E + +++
Sbjct: 144 HVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISST 203
Query: 208 LLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
L Y D RVF+ MP+ +V+ W +++ FS E L F AM +G+
Sbjct: 204 LAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVP 263
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF 327
T TVL C L L GKEIHG+++ +G ++ + ++L+DMY KCGS+ ++VF
Sbjct: 264 DGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVF 323
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
+GM K+ SW+ +L GY NG+ EKAI++F EM ++ F ++L C+
Sbjct: 324 NGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVR 379
Query: 388 EGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
G++ G ++ + L+D+ G+SG +D A V M ++ + W ++L++
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSAL 438
Query: 448 RLDG 451
+G
Sbjct: 439 AQNG 442
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 244/439 (55%), Gaps = 4/439 (0%)
Query: 101 TLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
+L L+ LY+ CG+L + V + D W ++ Y+ + +AL ++R M+
Sbjct: 340 SLSLALVELYAECGKLSDCETVLR-VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT 398
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
+ ++P F + ++ AC + G +G+ IH + + D +D+ V N+L+ Y + G
Sbjct: 399 QRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDS 457
Query: 221 VLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICA 280
VF + R+VV+WN+++ GFS G E + F M + + +T V+ C+
Sbjct: 458 ASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM-YHSYLEMNEVTFLAVIQACS 516
Query: 281 QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNT 340
+ +L GK +H +++ SG K D AL+DMYAKCG + + VF M S+ + SW++
Sbjct: 517 SIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSS 575
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
M+ Y ++G+I AI F++M+ S +P+ + F+++LS C HSG EG+ +FNLM+ +G
Sbjct: 576 MINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFG 635
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAA 460
V P+ EH+AC +D+L RSG L EA + MP S+WGSL+N CR+ + + +
Sbjct: 636 VSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIK 695
Query: 461 ERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTF 520
L +I ++ G Y +LSNIYA+ G WE +R+R M +KK G S I+I Q++ F
Sbjct: 696 NDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRF 755
Query: 521 VAGGSSDFRSSAEYLKIWN 539
AG + ++ Y + N
Sbjct: 756 GAGEENRIQTDEIYRFLGN 774
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 145/536 (27%), Positives = 246/536 (45%), Gaps = 64/536 (11%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
++Q + L S SL +LH HLL + GR+ +P +KLI Y+ G D +R VF
Sbjct: 1 MTQYMPLFRSCSSLRLVSQLHAHLLVT-GRLRRDPLPVTKLIESYAFMGSPDSSRLVF-- 57
Query: 126 EEEDPPESVWVAMAIGYSR-NRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS- 183
E P+S + I + L A+ +Y +++ + + F F L+AC +
Sbjct: 58 EAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHL 117
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
VG +H ++ K + D V+ +LL Y + G D +VF+ MP R++V+W+TL++
Sbjct: 118 SVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSC 177
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKAD 303
G+V + L F+ M + +G+ +T+ +V+ CA+L L + +HGQI + D
Sbjct: 178 LENGEVVKALRMFKCM-VDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLD 236
Query: 304 RPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR 363
L N+L+ MY+KCG + +++F+ + K+ SW M++ Y+ EKA+ F EMI+
Sbjct: 237 ETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK 296
Query: 364 SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYA-CLVDILGRSGKLD 422
S I P+ +T S+LS C GL EG+ + P+ E + LV++ GKL
Sbjct: 297 SGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLS 356
Query: 423 EALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYA 482
+ TV R + + + W SL+ ++YA
Sbjct: 357 DCETVLRVVSDR-NIVAWNSLI----------------------------------SLYA 381
Query: 483 DAGM-WEGVKRVREMMAIRGIKKDA-----------GCSWIQIKQRIHTFVAGGSSDFRS 530
GM + + R+M+ R IK DA + + ++IH V R+
Sbjct: 382 HRGMVIQALGLFRQMVTQR-IKPDAFTLASSISACENAGLVPLGKQIHGHV------IRT 434
Query: 531 SAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMW---VCGHSERLAAVFAL 583
+ N+L + SG + + V + I V W +CG S+ +V A+
Sbjct: 435 DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAI 490
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 252/445 (56%), Gaps = 13/445 (2%)
Query: 73 CISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPE 132
C + G+++H + +K ++ +++ L+ Y VCG A +VF E P
Sbjct: 116 CGKFSGIREGKQIHG--IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFG---EMPVR 170
Query: 133 SV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIH 190
V W + G++R L KEAL + M VEP + L + VG +G+ IH
Sbjct: 171 DVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIH 227
Query: 191 AQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVF 250
+ KR NAL+ YV+C D +RVF + +++ VSWN++I+G +
Sbjct: 228 GLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSK 287
Query: 251 ETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNAL 310
E +D F MQ G+ LT+VL CA L A+ G+ +H I+ +G K D + A+
Sbjct: 288 EAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAI 347
Query: 311 MDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDG 370
+DMYAKCG I ++F+G+ SK++ +WN +L G +I+G +++ F+EM++ +P+
Sbjct: 348 VDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNL 407
Query: 371 ITFVSLLSGCSHSGLTSEGQKFFNLMQ--DYGVQPSLEHYACLVDILGRSGKLDEALTVA 428
+TF++ L+ C H+GL EG+++F+ M+ +Y + P LEHY C++D+L R+G LDEAL +
Sbjct: 408 VTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELV 467
Query: 429 RNMPMKLSGSIWGSLLNSCRLDGNV-SLAETAAERLFEIEPNNAGNYVMLSNIYADAGMW 487
+ MP+K I G++L++C+ G + L + + +IE ++G YV+LSNI+A W
Sbjct: 468 KAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRW 527
Query: 488 EGVKRVREMMAIRGIKKDAGCSWIQ 512
+ V R+R +M ++GI K G S+I+
Sbjct: 528 DDVARIRRLMKVKGISKVPGSSYIE 552
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 143/303 (47%), Gaps = 6/303 (1%)
Query: 151 ALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLR 210
+ Y+ ++ P F F KAC R G+ IH + K D V N+L+
Sbjct: 90 TIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVH 149
Query: 211 FYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWI 270
FY CG S + +VF MP R+VVSW +I GF+ G E LD F M ++ +
Sbjct: 150 FYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLA---- 205
Query: 271 TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM 330
T VL ++ L GK IHG I+K NAL+DMY KC + +VF +
Sbjct: 206 TYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGEL 265
Query: 331 ESKDLTSWNTMLAGYSINGQIEKAIDLFDEM-IRSNIRPDGITFVSLLSGCSHSGLTSEG 389
E KD SWN+M++G + ++AIDLF M S I+PDG S+LS C+ G G
Sbjct: 266 EKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG 325
Query: 390 QKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRL 449
+ + G++ +VD+ + G ++ AL + + K + W +LL +
Sbjct: 326 RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK-NVFTWNALLGGLAI 384
Query: 450 DGN 452
G+
Sbjct: 385 HGH 387
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/455 (34%), Positives = 251/455 (55%), Gaps = 6/455 (1%)
Query: 70 LHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED 129
L C S ++G ++H L K + N L +Y+ CG L+ ARRVF D+ E
Sbjct: 277 LKACSSLLRPDYGSQIHG--LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVF-DQIER 333
Query: 130 PPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAI 189
P + W + G + N + EA+ V+ M + P + L A T G I
Sbjct: 334 PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQI 393
Query: 190 HAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFE-VMPQRNVVSWNTLIAGFSGQGK 248
H+ + K AD V N+LL Y C +FE + VSWNT++ +
Sbjct: 394 HSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQ 453
Query: 249 VFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLN 308
E L F+ M + E IT+ +L C ++++L G ++H +K+G ++ + N
Sbjct: 454 PVEMLRLFKLMLVSECEP-DHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKN 512
Query: 309 ALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRP 368
L+DMYAKCGS+G +++FD M+++D+ SW+T++ GY+ +G E+A+ LF EM + I P
Sbjct: 513 GLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEP 572
Query: 369 DGITFVSLLSGCSHSGLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTV 427
+ +TFV +L+ CSH GL EG K + MQ ++G+ P+ EH +C+VD+L R+G+L+EA
Sbjct: 573 NHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERF 632
Query: 428 ARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMW 487
M ++ +W +LL++C+ GNV LA+ AAE + +I+P N+ +V+L +++A +G W
Sbjct: 633 IDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNW 692
Query: 488 EGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVA 522
E +R M +KK G SWI+I+ +IH F A
Sbjct: 693 ENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFA 727
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 201/423 (47%), Gaps = 16/423 (3%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHL---CISRKSLEHGQKLHQHL 89
+N + SLCKS EAL + + + L C S +SL G+K+H H+
Sbjct: 34 MNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHI 93
Query: 90 LHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSK 149
L+S + + L + ++++Y CG L +AR VF E S + ++ GYS+N
Sbjct: 94 LNSNCKY--DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVS-YTSVITGYSQNGQGA 150
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
EA+ +Y ML + P FAF +KAC D +G+ +HAQ+ K + + + NAL+
Sbjct: 151 EAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALI 210
Query: 210 RFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSW 269
YV D RVF +P ++++SW+++IAGFS G FE L LKE + F
Sbjct: 211 AMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS-----HLKEMLSFGV 265
Query: 270 I-----TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
+ L C+ L G +IHG +KS + +L DMYA+CG + +
Sbjct: 266 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSAR 325
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
+VFD +E D SWN ++AG + NG ++A+ +F +M S PD I+ SLL +
Sbjct: 326 RVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPM 385
Query: 385 LTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
S+G + + + +G L L+ + L + + W ++L
Sbjct: 386 ALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTIL 445
Query: 445 NSC 447
+C
Sbjct: 446 TAC 448
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 150/325 (46%), Gaps = 7/325 (2%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRK--SLEHGQKLHQHLLH 91
N + L +G +EA+ + + + + IS LC K +L G ++H +++
Sbjct: 340 NVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII- 398
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
K + + T+ + L+T+Y+ C L +F+D + W + ++ E
Sbjct: 399 -KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEM 457
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
L +++ ML EP + L+ C ++ ++G +H K +Q + N L+
Sbjct: 458 LRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDM 517
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
Y +CG G R+F+ M R+VVSW+TLI G++ G E L F+ M+ G+ + +T
Sbjct: 518 YAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK-SAGIEPNHVT 576
Query: 272 LTTVLPICAQLTALHSGKEIHGQI-VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM 330
VL C+ + + G +++ + + G + + ++D+ A+ G + ++ D M
Sbjct: 577 FVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEM 636
Query: 331 E-SKDLTSWNTMLAGYSINGQIEKA 354
+ D+ W T+L+ G + A
Sbjct: 637 KLEPDVVVWKTLLSACKTQGNVHLA 661
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 264/518 (50%), Gaps = 38/518 (7%)
Query: 65 DISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQ 124
D L+L + L +++H H++ S + N L + L+ Y G A +VF
Sbjct: 132 DRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGN-YLWNSLVKFYMELGNFGVAEKVFA 190
Query: 125 DEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSR 184
P S + M +GY++ S EAL +Y M++ +EP + L C + D R
Sbjct: 191 -RMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIR 249
Query: 185 VGRAIHAQLAKRDE--EADQVVNNALLRFYVECGCSGDVLR------------------- 223
+G+ +H + +R ++ +++NALL Y +C SG R
Sbjct: 250 LGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVG 309
Query: 224 ------------VFEVMPQRNVVSWNTLIAGFSGQGKVFETL-DAFRAMQLKEGMGFSWI 270
VF+ MP+R++VSWN+L+ G+S +G T+ + F M + E + +
Sbjct: 310 FVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRV 369
Query: 271 TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM 330
T+ +++ A L G+ +HG +++ K D L +AL+DMY KCG I VF
Sbjct: 370 TMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTA 429
Query: 331 ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQ 390
KD+ W +M+ G + +G ++A+ LF M + P+ +T +++L+ CSHSGL EG
Sbjct: 430 TEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGL 489
Query: 391 KFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEAL-TVARNMPMKLSGSIWGSLLNSCR 448
FN M+D +G P EHY LVD+L R+G+++EA V + MPM+ S S+WGS+L++CR
Sbjct: 490 HVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACR 549
Query: 449 LDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGC 508
++ AE A L ++EP G YV+LSNIYA G W + RE M RG+KK AG
Sbjct: 550 GGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGY 609
Query: 509 SWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIK 546
S + + +H FVA + E +I L N +K
Sbjct: 610 SSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 180/396 (45%), Gaps = 49/396 (12%)
Query: 116 LDEARRVFQDEEEDPPESVWVAM--AIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVA 173
LD A+ +F + +P V+ M A+ S+N E +Y M+ V P F
Sbjct: 84 LDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN----ECFGLYSSMIRHRVSPDRQTFLYL 139
Query: 174 LKACTDVGDSRVGRAIHAQLAKRD-EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRN 232
+KA + + + + IH + + N+L++FY+E G G +VF MP +
Sbjct: 140 MKASSFLSEVK---QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPD 196
Query: 233 VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIH 292
V S+N +I G++ QG E L + M + +G+ T+ ++L C L+ + GK +H
Sbjct: 197 VSSFNVMIVGYAKQGFSLEALKLYFKM-VSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVH 255
Query: 293 GQIVKSGKKADRPLL--NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQ 350
G I + G L+ NAL+DMY KC G K+ FD M+ KD+ SWNTM+ G+ G
Sbjct: 256 GWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGD 315
Query: 351 IEKAIDLFDEM---------------------------------IRSNIRPDGITFVSLL 377
+E A +FD+M I ++PD +T VSL+
Sbjct: 316 MEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLI 375
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSG 437
SG +++G S G+ L+ ++ + L+D+ + G ++ A V + K
Sbjct: 376 SGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK-DV 434
Query: 438 SIWGSLLNSCRLDGNVSLAETAAERLFE--IEPNNA 471
++W S++ GN A R+ E + PNN
Sbjct: 435 ALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNV 470
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 258/477 (54%), Gaps = 6/477 (1%)
Query: 37 LKSLCKSGKLEEALRLI-ESPNPTPYQDED-ISQLLHLCISRKSLEHGQKLHQHLLHSKG 94
+ SL +SG +EE+ + E N + D IS L++ + G+ H ++
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 95 RVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLV 154
+ + T+ + L+++Y L A ++F E+ + W M GY + + + + +
Sbjct: 363 SL--DSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIEL 420
Query: 155 YRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVE 214
+R + +E + + + + +C+ +G +G+++H + K + V N+L+ Y +
Sbjct: 421 FRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGK 480
Query: 215 CGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
G R+F NV++WN +IA + + + + F M + E S ITL T
Sbjct: 481 MGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRM-VSENFKPSSITLVT 538
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKD 334
+L C +L G+ IH I ++ + + L AL+DMYAKCG + +++FD KD
Sbjct: 539 LLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKD 598
Query: 335 LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFN 394
WN M++GY ++G +E AI LFD+M S+++P G TF++LLS C+H+GL +G+K F
Sbjct: 599 AVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFL 658
Query: 395 LMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVS 454
M Y V+P+L+HY+CLVD+L RSG L+EA + +MP G IWG+LL+SC G
Sbjct: 659 KMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFE 718
Query: 455 LAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWI 511
+ AER +P N G Y+ML+N+Y+ AG WE +R REMM G+ K AG S +
Sbjct: 719 MGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 169/377 (44%), Gaps = 16/377 (4%)
Query: 55 SPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCG 114
S + Y D IS +L C SLE +K H L+ + G + EN + SKLI+ Y+ G
Sbjct: 18 SSSSASYVDRHISVIL--CDQSLSLESLRK-HNALIITGG-LSENIFVASKLISSYASYG 73
Query: 115 RLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVAL 174
+ + + RVF +W ++ + N +L + ML P +F + +
Sbjct: 74 KPNLSSRVFHLVTRRDI-FLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVV 132
Query: 175 KACTDVGDSRVGRAIHAQLAKRDE-EADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNV 233
AC ++ VG +H + K + + V + + FY +CG D VF+ MP R+V
Sbjct: 133 SACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDV 192
Query: 234 VSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWI---TLTTVLPICAQLTALHSGKE 290
V+W +I+G G+ L M G TL C+ L AL G+
Sbjct: 193 VAWTAIISGHVQNGESEGGLGYLCKMH-SAGSDVDKPNPRTLECGFQACSNLGALKEGRC 251
Query: 291 IHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQ 350
+HG VK+G + + + +++ Y+K G+ F + +D+ SW +++A + +G
Sbjct: 252 LHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGD 311
Query: 351 IEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM------QDYGVQPS 404
+E++ D+F EM + PDG+ L++ L +G+ F + D V S
Sbjct: 312 MEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNS 371
Query: 405 LEHYACLVDILGRSGKL 421
L C ++L + KL
Sbjct: 372 LLSMYCKFELLSVAEKL 388
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 229/407 (56%), Gaps = 35/407 (8%)
Query: 151 ALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLR 210
A+ VYR + A +P F F LK V D GR IH Q+ ++ V L++
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 211 FYVECGCSGDVLRVF-------------------------------EVMP--QRNVVSWN 237
Y CG GD ++F E+MP RN VSW
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT 219
Query: 238 TLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVK 297
+I+G++ G+ E ++ F+ M L E + +TL VL CA L +L G+ I +
Sbjct: 220 CVISGYAKSGRASEAIEVFQRM-LMENVEPDEVTLLAVLSACADLGSLELGERICSYVDH 278
Query: 298 SGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDL 357
G L NA++DMYAK G+I VF+ + +++ +W T++AG + +G +A+ +
Sbjct: 279 RGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAM 338
Query: 358 FDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILG 416
F+ M+++ +RP+ +TF+++LS CSH G G++ FN M+ YG+ P++EHY C++D+LG
Sbjct: 339 FNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLG 398
Query: 417 RSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVM 476
R+GKL EA V ++MP K + +IWGSLL + + ++ L E A L ++EPNN+GNY++
Sbjct: 399 RAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYML 458
Query: 477 LSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAG 523
L+N+Y++ G W+ + +R MM G+KK AG S I+++ R++ F++G
Sbjct: 459 LANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISG 505
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 157/343 (45%), Gaps = 17/343 (4%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
++ L+ + S L +K+ +L +++ + + L+ Y G +DEAR +
Sbjct: 154 VTGLIQMYFSCGGLGDARKMFDEML------VKDVNVWNALLAGYGKVGEMDEARSLL-- 205
Query: 126 EEEDP----PESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVG 181
E P E W + GY+++ + EA+ V++ ML +VEP L AC D+G
Sbjct: 206 -EMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 182 DSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIA 241
+G I + + R +NNA++ Y + G L VFE + +RNVV+W T+IA
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 242 GFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI-VKSGK 300
G + G E L F M +K G+ + +T +L C+ + + GK + + K G
Sbjct: 325 GLATHGHGAEALAMFNRM-VKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGI 383
Query: 301 KADRPLLNALMDMYAKCGSIGYCKKVFDGMESK-DLTSWNTMLAGYSINGQIEKAIDLFD 359
+ ++D+ + G + +V M K + W ++LA +++ +E
Sbjct: 384 HPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALS 443
Query: 360 EMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQ 402
E+I+ G ++ L + S+ G E + N+M+ GV+
Sbjct: 444 ELIKLEPNNSG-NYMLLANLYSNLGRWDESRMMRNMMKGIGVK 485
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/501 (31%), Positives = 266/501 (53%), Gaps = 40/501 (7%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
L+ + S K++ H +H ++ + ++ + +LI + S +D A VF
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHD--QDAFVVFELIRVCSTLDSVDYAYDVFS-YVS 88
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRA 188
+P ++ AM G+ + S + + +Y M+ SV P N+ + LKAC D +V R
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCRE 144
Query: 189 IHAQLAKR-----------------------------DE--EADQVVNNALLRFYVECGC 217
IHAQ+ K DE + D V ++ Y ECG
Sbjct: 145 IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 204
Query: 218 SGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLP 277
+ L +F+ + ++ V W +I G ++ + L+ FR MQ+ E + + T VL
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQM-ENVSANEFTAVCVLS 263
Query: 278 ICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTS 337
C+ L AL G+ +H + + + NAL++MY++CG I ++VF M KD+ S
Sbjct: 264 ACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVIS 323
Query: 338 WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ 397
+NTM++G +++G +AI+ F +M+ RP+ +T V+LL+ CSH GL G + FN M+
Sbjct: 324 YNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMK 383
Query: 398 D-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
+ V+P +EHY C+VD+LGR G+L+EA N+P++ + G+LL++C++ GN+ L
Sbjct: 384 RVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELG 443
Query: 457 ETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQR 516
E A+RLFE E ++G YV+LSN+YA +G W+ +RE M GI+K+ GCS I++ +
Sbjct: 444 EKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQ 503
Query: 517 IHTFVAGGSSDFRSSAEYLKI 537
IH F+ G + A Y ++
Sbjct: 504 IHEFLVGDIAHPHKEAIYQRL 524
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/495 (32%), Positives = 266/495 (53%), Gaps = 50/495 (10%)
Query: 90 LHSKGRVIENPTLKSKL----------ITLYSVCGRLDEARRVFQDEEEDPPESV--WVA 137
L S G +I LK +L I +++ CG ++ AR+VF +E P + W
Sbjct: 171 LSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVF---DESPVRDLVSWNC 227
Query: 138 MAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD 197
+ GY + +++A+ VY+ M + V+P + + +C+ +GD G+ + + +
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG 287
Query: 198 EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQG------KVFE 251
+ NAL+ + +CG + R+F+ + +R +VSW T+I+G++ G K+F+
Sbjct: 288 LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFD 347
Query: 252 TLDA-----FRAM-----QLKEGMGF--------------SWITLTTVLPICAQLTALHS 287
++ + AM Q K G IT+ L C+QL AL
Sbjct: 348 DMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDV 407
Query: 288 GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSI 347
G IH I K + L +L+DMYAKCG+I VF G+++++ ++ ++ G ++
Sbjct: 408 GIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLAL 467
Query: 348 NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLE 406
+G AI F+EMI + I PD ITF+ LLS C H G+ G+ +F+ M+ + + P L+
Sbjct: 468 HGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLK 527
Query: 407 HYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEI 466
HY+ +VD+LGR+G L+EA + +MPM+ ++WG+LL CR+ GNV L E AA++L E+
Sbjct: 528 HYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLEL 587
Query: 467 EPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSS 526
+P+++G YV+L +Y +A MWE KR R MM RG++K GCS I++ + F+
Sbjct: 588 DPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRD-- 645
Query: 527 DFRSSAEYLKIWNAL 541
+S E KI++ L
Sbjct: 646 --KSRPESEKIYDRL 658
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 197/414 (47%), Gaps = 44/414 (10%)
Query: 84 KLHQHLLHSKGRVIEN-----PTLKSKLITL--YSVCGRLDEARRVFQDEEEDPPESVWV 136
KL HL + ++I N P S+LI S LD + ++ + E +P W
Sbjct: 64 KLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIE-NPNIFSWN 122
Query: 137 AMAIGYSRNRLSKEALLVYRDMLARSV---EPGNFAFSVALKACTDVGDSRVGRAIHAQL 193
G+S + KE+ L+Y+ ML P +F + V K C D+ S +G I +
Sbjct: 123 VTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHV 182
Query: 194 AKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETL 253
K E V+NA + + CG + +VF+ P R++VSWN LI G+ G+ + +
Sbjct: 183 LKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAI 242
Query: 254 DAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDM 313
++ M+ EG+ +T+ ++ C+ L L+ GKE + + ++G + PL+NALMDM
Sbjct: 243 YVYKLME-SEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDM 301
Query: 314 YAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYS--------------------------I 347
++KCG I +++FD +E + + SW TM++GY+ I
Sbjct: 302 FSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMI 361
Query: 348 NGQI-----EKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQ 402
G + + A+ LF EM SN +PD IT + LS CS G G ++ Y +
Sbjct: 362 GGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLS 421
Query: 403 PSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
++ LVD+ + G + EAL+V + + S + + +++ L G+ S A
Sbjct: 422 LNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT-YTAIIGGLALHGDASTA 474
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/446 (33%), Positives = 237/446 (53%), Gaps = 40/446 (8%)
Query: 116 LDEARRVFQDEEEDPPESVWVAMAIGYSRNR--LSKEALLVYRDMLARSV-EPGNFAFSV 172
L AR +F D P ++ A+ YS + + A +R M+ RSV P +F + +
Sbjct: 73 LSYARFIF-DRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 173 ALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVEC----------------- 215
LK+ + + +H L K VV ALL Y
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 216 ------------GCSGDV---LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQ 260
SGD+ + +FE MP+R+V SWN ++A + G E + FR M
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 261 LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI 320
+ + + +T+ VL CAQ L K IH + +D + N+L+D+Y KCG++
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 321 GYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI---RPDGITFVSLL 377
VF K LT+WN+M+ ++++G+ E+AI +F+EM++ NI +PD ITF+ LL
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
Query: 378 SGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLS 436
+ C+H GL S+G+ +F+LM + +G++P +EHY CL+D+LGR+G+ DEAL V M MK
Sbjct: 372 NACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKAD 431
Query: 437 GSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREM 496
+IWGSLLN+C++ G++ LAE A + L + PNN G M++N+Y + G WE +R R+M
Sbjct: 432 EAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKM 491
Query: 497 MAIRGIKKDAGCSWIQIKQRIHTFVA 522
+ + K G S I+I +H F +
Sbjct: 492 IKHQNAYKPPGWSRIEIDNEVHQFYS 517
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 147/353 (41%), Gaps = 48/353 (13%)
Query: 59 TPYQDEDISQ-LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKL----------- 106
TPY S L+H + + + LLHS + + TL +L
Sbjct: 136 TPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVS 195
Query: 107 ----ITLYSVCGRLDEARRVFQD-EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
++ Y+ G + A +F+D E D P W A+ ++N L EA+ ++R M+
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPS--WNAILAACTQNGLFLEAVSLFRRMINE 253
Query: 162 -SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
S+ P L AC G ++ + IHA +RD +D V+N+L+ Y +CG +
Sbjct: 254 PSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEE 313
Query: 221 VLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLK--EGMGFSWITLTTVLPI 278
VF++ ++++ +WN++I F+ G+ E + F M + IT +L
Sbjct: 314 ASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNA 373
Query: 279 CAQLTALHSGKEIHGQIVKSGKKADRPLLN------------ALMDMYAKCGSIGYCKKV 326
C HG +V G+ + N L+D+ + G +V
Sbjct: 374 CT-----------HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEV 422
Query: 327 FDGMESK-DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLS 378
M+ K D W ++L I+G ++ A ++ N P+ +V++++
Sbjct: 423 MSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALN--PNNGGYVAMMA 473
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 221/385 (57%), Gaps = 7/385 (1%)
Query: 153 LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFY 212
L++ E +F + + A +G R + +++KRD V NA++ Y
Sbjct: 103 LLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVP----VWNAMITGY 158
Query: 213 VECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
G + +F+ MP++NV SW T+I+GFS G E L F M+ + + + IT+
Sbjct: 159 QRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITV 218
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM-E 331
+VLP CA L L G+ + G ++G + + NA ++MY+KCG I K++F+ +
Sbjct: 219 VSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGN 278
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
++L SWN+M+ + +G+ ++A+ LF +M+R +PD +TFV LL C H G+ +GQ+
Sbjct: 279 QRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQE 338
Query: 392 FFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD 450
F M++ + + P LEHY C++D+LGR GKL EA + + MPMK +WG+LL +C
Sbjct: 339 LFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFH 398
Query: 451 GNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSW 510
GNV +AE A+E LF++EP N GN V++SNIYA W+GV R+R++M + K AG S+
Sbjct: 399 GNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSY 458
Query: 511 -IQIKQRIHTFVAGGSSDFRSSAEY 534
+++ +H F S RS Y
Sbjct: 459 FVEVGVDVHKFTVEDKSHPRSYEIY 483
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 236 WNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI 295
+N LI + + E++ + + +G+ S T + A ++ + +H Q
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYNLLSF-DGLRPSHHTFNFIFAASASFSSARPLRLLHSQF 108
Query: 296 VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAI 355
+SG ++D L+ YAK G++ ++VFD M +D+ WN M+ GY G ++ A+
Sbjct: 109 FRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAM 168
Query: 356 DLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDI 414
+LFD M R N+ ++ +++SG S +G SE K F M+ D V+P+ + +V +
Sbjct: 169 ELFDSMPRKNV----TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN---HITVVSV 221
Query: 415 LGRSGKLDEALTVARNM 431
L L E L + R +
Sbjct: 222 LPACANLGE-LEIGRRL 237
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 271/507 (53%), Gaps = 8/507 (1%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRK--SLEHGQKLHQHLLH 91
N +K ++ +EAL ++ +++S + S + +L G +LH +++
Sbjct: 355 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI- 413
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
K N + + LI +YS C R F D W + GY++N EA
Sbjct: 414 -KHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL-RMHDKDLISWTTVIAGYAQNDCHVEA 471
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
L ++RD+ + +E L+A + + + + IH + ++ D V+ N L+
Sbjct: 472 LELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDV 530
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
Y +C G RVFE + ++VVSW ++I+ + G E ++ FR M ++ G+ +
Sbjct: 531 YGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM-VETGLSADSVA 589
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME 331
L +L A L+AL+ G+EIH +++ G + + A++DMYA CG + K VFD +E
Sbjct: 590 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE 649
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
K L + +M+ Y ++G + A++LFD+M N+ PD I+F++LL CSH+GL EG+
Sbjct: 650 RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRG 709
Query: 392 FFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD 450
F +M+ +Y ++P EHY CLVD+LGR+ + EA + M + + +W +LL +CR
Sbjct: 710 FLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSH 769
Query: 451 GNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSW 510
+ E AA+RL E+EP N GN V++SN++A+ G W V++VR M G++K GCSW
Sbjct: 770 SEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSW 829
Query: 511 IQIKQRIHTFVAGGSSDFRSSAEYLKI 537
I++ ++H F A S S Y K+
Sbjct: 830 IEMDGKVHKFTARDKSHPESKEIYEKL 856
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 188/390 (48%), Gaps = 8/390 (2%)
Query: 31 PPLNPTLKSLCKSGKLEEAL-RLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHL 89
P P+ K C G L EA RL S N +P E + +L LC R+++ G++LH +
Sbjct: 49 PVQVPSPKLACFDGVLTEAFQRLDVSENNSPV--EAFAYVLELCGKRRAVSQGRQLHSRI 106
Query: 90 LHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSK 149
+ E L KL+ +Y CG LD+A +VF DE D W M Y N
Sbjct: 107 FKTFPS-FELDFLAGKLVFMYGKCGSLDDAEKVF-DEMPDRTAFAWNTMIGAYVSNGEPA 164
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
AL +Y +M V G +F LKAC + D R G +H+ L K + + NAL+
Sbjct: 165 SALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALV 224
Query: 210 RFYVECGCSGDVLRVFEVMPQR-NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS 268
Y + R+F+ ++ + V WN++++ +S GK ETL+ FR M + G +
Sbjct: 225 SMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT-GPAPN 283
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL-NALMDMYAKCGSIGYCKKVF 327
T+ + L C + GKEIH ++KS + + NAL+ MY +CG + +++
Sbjct: 284 SYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL 343
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
M + D+ +WN+++ GY N ++A++ F +MI + + D ++ S+++
Sbjct: 344 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 388 EGQKFFNLMQDYGVQPSLEHYACLVDILGR 417
G + + +G +L+ L+D+ +
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 196/413 (47%), Gaps = 36/413 (8%)
Query: 69 LLHLCISRKSLEHGQKLHQHLL----HSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQ 124
LL C + + G +LH L+ HS G ++ + L+++Y+ L ARR+F
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIV------NALVSMYAKNDDLSAARRLFD 241
Query: 125 DEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSR 184
+E +W ++ YS + S E L ++R+M P ++ AL AC ++
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 185 VGRAIHAQLAKRDEEADQV-VNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
+G+ IHA + K + ++ V NAL+ Y CG R+ M +VV+WN+LI G+
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKAD 303
E L+ F M + G +++T+++ +L+ L +G E+H ++K G ++
Sbjct: 362 VQNLMYKEALEFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420
Query: 304 RPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR 363
+ N L+DMY+KC Y + F M KDL SW T++AGY+ N +A++LF ++ +
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480
Query: 364 SNIRPDGITFVSLLSGCS-----------HSGLTSEGQKFFNLMQDYGVQPSLEHYACLV 412
+ D + S+L S H + +G + D +Q LV
Sbjct: 481 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG------LLDTVIQNE------LV 528
Query: 413 DILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE 465
D+ G+ + A V ++ K S W S+++S L+GN S A R+ E
Sbjct: 529 DVYGKCRNMGYATRVFESIKGKDVVS-WTSMISSSALNGNESEAVELFRRMVE 580
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 197/401 (49%), Gaps = 19/401 (4%)
Query: 34 NPTLKSLCKSGKLEEALRL-----IESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQH 88
N L S SGK E L L + P P Y I L C + G+++H
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYT---IVSALTACDGFSYAKLGKEIHAS 309
Query: 89 LLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLS 148
+L S E + LI +Y+ CG++ +A R+ + + + W ++ GY +N +
Sbjct: 310 VLKSSTHSSELYVCNA-LIAMYTRCGKMPQAERILR-QMNNADVVTWNSLIKGYVQNLMY 367
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
KEAL + DM+A + + + + A + + G +HA + K +++ V N L
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427
Query: 209 LRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS 268
+ Y +C + + R F M ++++SW T+IAG++ E L+ FR + K+ M
Sbjct: 428 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA-KKRMEID 486
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFD 328
+ L ++L + L ++ KEIH I++ G D + N L+D+Y KC ++GY +VF+
Sbjct: 487 EMILGSILRASSVLKSMLIVKEIHCHILRKG-LLDTVIQNELVDVYGKCRNMGYATRVFE 545
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSE 388
++ KD+ SW +M++ ++NG +A++LF M+ + + D + + +LS + ++
Sbjct: 546 SIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNK 605
Query: 389 GQKF--FNLMQDYGVQPSL-----EHYACLVDILGRSGKLD 422
G++ + L + + ++ S+ + YAC D+ D
Sbjct: 606 GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFD 646
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 132/267 (49%), Gaps = 6/267 (2%)
Query: 169 AFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD-QVVNNALLRFYVECGCSGDVLRVFEV 227
AF+ L+ C GR +H+++ K + + L+ Y +CG D +VF+
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 228 MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHS 287
MP R +WNT+I + G+ L + M++ EG+ + +L CA+L + S
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV-EGVPLGLSSFPALLKACAKLRDIRS 200
Query: 288 GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK-DLTSWNTMLAGYS 346
G E+H +VK G + ++NAL+ MYAK + +++FDG + K D WN++L+ YS
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 347 INGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLE 406
+G+ + ++LF EM + P+ T VS L+ C G++ + S E
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS-E 319
Query: 407 HYAC--LVDILGRSGKLDEALTVARNM 431
Y C L+ + R GK+ +A + R M
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQM 346
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 125/301 (41%), Gaps = 38/301 (12%)
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLL-NALMDMYAKCGSIGYCKKVFDGMESK 333
VL +C + A+ G+++H +I K+ + L L+ MY KCGS+ +KVFD M +
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGI-----TFVSLLSGCSHSGLTSE 388
+WNTM+ Y NG+ A+ L+ N+R +G+ +F +LL C+
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALY-----WNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 389 GQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCR 448
G + +L+ G + LV + ++ L A + K +W S+L+S
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 449 LDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGC 508
G SL R + +Y ++S + A G
Sbjct: 261 TSGK-SLETLELFREMHMTGPAPNSYTIVSALTACDGF---------------------- 297
Query: 509 SWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVM 568
S+ ++ + IH V S+ S+E L + NAL G +P + +L +N V
Sbjct: 298 SYAKLGKEIHASVLKSSTH---SSE-LYVCNALIAMYTRCGKMPQAERILRQMNNADVVT 353
Query: 569 W 569
W
Sbjct: 354 W 354
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 160/509 (31%), Positives = 256/509 (50%), Gaps = 77/509 (15%)
Query: 98 ENPTLKSKLITLYSVCGRLDEARRVF---------------------------------- 123
EN + ++L+TLY GR+ +A +F
Sbjct: 191 ENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWM 250
Query: 124 QDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS 183
Q EE P E W ++ +S+ ++ L + M A +V C ++
Sbjct: 251 QREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEAL 310
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
+ +H + K E NAL+ Y + G D +F + + + SWN+LI F
Sbjct: 311 SIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSF 370
Query: 244 SGQGKVFE---------------------------------------TLDAFRAMQLKEG 264
GK+ E +L+ FR MQ +
Sbjct: 371 VDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKV 430
Query: 265 MGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
+ S +T+ +L ICA+L AL+ G+EIHG ++++ + + NAL++MYAKCG +
Sbjct: 431 LANS-VTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGS 489
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
VF+ + KDL SWN+++ GY ++G EKA+ +FD MI S PDGI V++LS CSH+G
Sbjct: 490 LVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAG 549
Query: 385 LTSEGQK-FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSL 443
L +G++ F+++ + +G++P EHYAC+VD+LGR G L EA + +NMPM+ + G+L
Sbjct: 550 LVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGAL 609
Query: 444 LNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIK 503
LNSCR+ NV +AE A +L +EP G+Y++LSNIY+ G WE VR + + +K
Sbjct: 610 LNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLK 669
Query: 504 KDAGCSWIQIKQRIHTFVAGG--SSDFRS 530
K +G SWI++K++ + F +G S+F +
Sbjct: 670 KVSGSSWIEVKKKKYKFSSGSIVQSEFET 698
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 179/388 (46%), Gaps = 46/388 (11%)
Query: 68 QLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEE 127
LL LC++ + +++H +L S + + +L + LI++Y+ G L +AR VF+
Sbjct: 61 HLLGLCLTA---QQCRQVHAQVLLSD-FIFRSGSLAANLISVYARLGLLLDARNVFETVS 116
Query: 128 EDPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV 185
+ W ++ + L + AL +YR M R + + + L+AC +G +
Sbjct: 117 LVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGL 176
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
RA H Q+ + + + V N LL Y + G GD +F MP RN +SWN +I GFS
Sbjct: 177 CRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQ 236
Query: 246 Q-----------------------------------GKVFETLDAFRAMQLKEGMGFSWI 270
+ GK + L F M++ G S
Sbjct: 237 EYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMS-GNAVSGE 295
Query: 271 TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM 330
L +CA+L AL +++HG ++K G + P NAL+ +Y K G + + +F +
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI 355
Query: 331 ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR----SNIRPDGITFVSLLSGCSHSGLT 386
+K + SWN+++ + G++++A+ LF E+ N++ + +T+ S++ GC+ G
Sbjct: 356 RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRG 415
Query: 387 SEGQKFFNLMQDYGVQPSLEHYACLVDI 414
+ ++F MQ V + C++ I
Sbjct: 416 DDSLEYFRQMQFSKVLANSVTICCILSI 443
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 11/250 (4%)
Query: 187 RAIHAQLAKRDE--EADQVVNNALLRFYVECGCSGDVLRVFEVMPQ---RNVVSWNTLIA 241
R +HAQ+ D + + N L+ Y G D VFE + ++ WN+++
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILK 131
Query: 242 GFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKK 301
G L+ +R M+ + G +I L +L C L + H Q+++ G K
Sbjct: 132 ANVSHGLYENALELYRGMRQRGLTGDGYI-LPLILRACRYLGRFGLCRAFHTQVIQIGLK 190
Query: 302 ADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM 361
+ ++N L+ +Y K G +G +F M ++ SWN M+ G+S E A+ +F+ M
Sbjct: 191 ENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWM 250
Query: 362 IRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKL 421
R +PD +T+ S+LS S G + K+F+LM+ G S E A +
Sbjct: 251 QREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAEL--- 307
Query: 422 DEALTVARNM 431
EAL++A +
Sbjct: 308 -EALSIAEKV 316
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 136/343 (39%), Gaps = 42/343 (12%)
Query: 29 KPPPLNPTLKSLCKS--GKLEEALRLIE--SPNPTPYQDEDISQLLHLCISRKSLEHGQK 84
KP + T C S GK E+ L+ + E ++ +C ++L +K
Sbjct: 256 KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEK 315
Query: 85 LHQH---------------LLHSKG------------RVIENPTLKS--KLITLYSVCGR 115
+H + L+H G R I N ++S LIT + G+
Sbjct: 316 VHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGK 375
Query: 116 LDEARRVFQDEEE-------DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNF 168
LDEA +F + EE W ++ G + ++L +R M V +
Sbjct: 376 LDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSV 435
Query: 169 AFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVM 228
L C ++ +GR IH + + + +V NAL+ Y +CG + VFE +
Sbjct: 436 TICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI 495
Query: 229 PQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSG 288
++++SWN++I G+ G + L F M + G I L VL C+ + G
Sbjct: 496 RDKDLISWNSIIKGYGMHGFAEKALSMFDRM-ISSGFHPDGIALVAVLSACSHAGLVEKG 554
Query: 289 KEIHGQIVKS-GKKADRPLLNALMDMYAKCGSIGYCKKVFDGM 330
+EI + K G + + ++D+ + G + ++ M
Sbjct: 555 REIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 124/298 (41%), Gaps = 24/298 (8%)
Query: 289 KEIHGQIVKSGKKADRPLLNA-LMDMYAKCGSIGYCKKVFDGMES---KDLTSWNTMLAG 344
+++H Q++ S L A L+ +YA+ G + + VF+ + DL WN++L
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 345 YSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPS 404
+G E A++L+ M + + DG +L C + G + F + G++ +
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKEN 192
Query: 405 LEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLF 464
L L+ + ++G++ +A + MP++ S W ++ + + A E +
Sbjct: 193 LHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMS-WNVMIKGFSQEYDCESAVKIFEWMQ 251
Query: 465 --EIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRG-----------IKKDAGCSWI 511
E +P+ +LS ++ G +E V + +M + G A +
Sbjct: 252 REEFKPDEVTWTSVLS-CHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEAL 310
Query: 512 QIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMW 569
I +++H +V G + EYL NAL + G + + + + I + W
Sbjct: 311 SIAEKVHGYVIKGGFE-----EYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESW 363
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/597 (28%), Positives = 290/597 (48%), Gaps = 82/597 (13%)
Query: 31 PPLNPTLKSLC----------KSGKLEEALRLIESPNPT----PYQDEDISQLLHLCISR 76
P NP + +C +L +A+ +ES P+ + ++ LL C
Sbjct: 2 PISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPF--DLLASLLQQCGDT 59
Query: 77 KSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEE--------- 127
KSL+ G+ +H+HL G N L + LI +Y CG+ +A +VF
Sbjct: 60 KSLKQGKWIHRHL-KITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNN 118
Query: 128 ------------------EDPPES---VWVAMAIGYSRNRLSKEALLVYRDMLARSVEPG 166
+ PE W M IGY+++ EAL Y++ ++
Sbjct: 119 MVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 167 NFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFE 226
F+F+ L AC ++ R H Q+ ++ V++ +++ Y +CG R F+
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 227 VM-------------------------------PQRNVVSWNTLIAGFSGQGKVFETLDA 255
M P++N VSW LIAG+ QG LD
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 256 FRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYA 315
FR M + G+ T ++ L A + +L GKEIHG ++++ + + ++++L+DMY+
Sbjct: 299 FRKM-IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYS 357
Query: 316 KCGSIGYCKKVFDGMESK-DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFV 374
K GS+ ++VF + K D WNTM++ + +G KA+ + D+MI+ ++P+ T V
Sbjct: 358 KSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV 417
Query: 375 SLLSGCSHSGLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPM 433
+L+ CSHSGL EG ++F M +G+ P EHYACL+D+LGR+G E + MP
Sbjct: 418 VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPF 477
Query: 434 KLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRV 493
+ IW ++L CR+ GN L + AA+ L +++P ++ Y++LS+IYAD G WE V+++
Sbjct: 478 EPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKL 537
Query: 494 REMMAIRGIKKDAGCSWIQIKQRIHTF-VAGGSSDFRSSAEYLKIWNALSNAIKDSG 549
R +M R + K+ SWI+I++++ F V+ GS E I + L+ I++
Sbjct: 538 RGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIEEEA 594
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/449 (33%), Positives = 248/449 (55%), Gaps = 13/449 (2%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
S ++ LY CG++DEA +F + W M G+++ S +A+ YR+M
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDV-ICWTTMVTGFAQAGKSLKAVEFYREMQNEGF 213
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR 223
L+A D+GD+++GR++H L + + VV +L+ Y + G R
Sbjct: 214 GRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASR 273
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS--WITLTTVLPICAQ 281
VF M + VSW +LI+GF+ G + +A MQ +GF +TL VL C+Q
Sbjct: 274 VFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ---SLGFQPDLVTLVGVLVACSQ 330
Query: 282 LTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTM 341
+ +L +G+ +H I+K DR ALMDMY+KCG++ +++F+ + KDL WNTM
Sbjct: 331 VGSLKTGRLVHCYILKR-HVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTM 389
Query: 342 LAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYG 400
++ Y I+G ++ + LF +M SNI PD TF SLLS SHSGL +GQ +F++M Y
Sbjct: 390 ISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYK 449
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAA 460
+QPS +HY CL+D+L R+G+++EAL + + + + IW +LL+ C N+S+ + AA
Sbjct: 450 IQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAA 509
Query: 461 ERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTF 520
++ ++ P++ G ++SN +A A W+ V +VR++M ++K G S I++ + TF
Sbjct: 510 NKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTF 569
Query: 521 VAGGSSDFRSSAEY--LKIWNALSNAIKD 547
+ D Y L++ L I+D
Sbjct: 570 LM---EDLSHHEHYHMLQVLRNLKTEIRD 595
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 202/423 (47%), Gaps = 23/423 (5%)
Query: 72 LCISR-KSLEHGQKLHQHLLH------SKGRVIENPTLKSKLITLYSVCGRLDE---ARR 121
LC R K L+ KL +H+ S G ++ ++ LI + CGR+ E AR+
Sbjct: 15 LCPKRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLI---ASCGRIGEISYARK 71
Query: 122 VFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVG 181
VF DE SV+ +M + YSR + E L +Y M+A ++P + F++ +KAC
Sbjct: 72 VF-DELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGL 130
Query: 182 DSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIA 241
G A+ + + D V +++L Y++CG + +F M +R+V+ W T++
Sbjct: 131 VLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVT 190
Query: 242 GFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKK 301
GF+ GK + ++ +R MQ EG G + + +L L G+ +HG + ++G
Sbjct: 191 GFAQAGKSLKAVEFYREMQ-NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLP 249
Query: 302 ADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM 361
+ + +L+DMYAK G I +VF M K SW ++++G++ NG KA + EM
Sbjct: 250 MNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEM 309
Query: 362 IRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKL 421
+PD +T V +L CS G G+ + V + A L+D+ + G L
Sbjct: 310 QSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATA-LMDMYSKCGAL 368
Query: 422 DEALTVARNMPMKLSGSIWGSLLNSCRLDGN----VSLAETAAERLFEIEPNNAGNYVML 477
+ + ++ K W ++++ + GN VSL E IEP++A +L
Sbjct: 369 SSSREIFEHVGRK-DLVCWNTMISCYGIHGNGQEVVSLFLKMTES--NIEPDHATFASLL 425
Query: 478 SNI 480
S +
Sbjct: 426 SAL 428
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/488 (32%), Positives = 256/488 (52%), Gaps = 6/488 (1%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPY--QDEDISQLLHLCISRKSLEHGQKLHQHLLHSKG 94
+ S C+ G L EA++LI+ + + E ++ LL LC S ++ L+
Sbjct: 120 INSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDE 179
Query: 95 RVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLV 154
R+ E+ L + L+ +Y A VF D+ E E W AM G N+ + + +
Sbjct: 180 RMQESVLLSTALVDMYLKFDDHAAAFHVF-DQMEVKNEVSWTAMISGCVANQNYEMGVDL 238
Query: 155 YRDMLARSVEPGNFAFSVALKACTDVG-DSRVGRAIHAQLAKRDEEADQVVNNALLRFYV 213
+R M ++ P L AC ++ S + + IH + AD+ + A + Y
Sbjct: 239 FRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC 298
Query: 214 ECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLT 273
CG +FE R+VV W+++I+G++ G E ++ M+ KEG+ + +TL
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR-KEGIEANSVTLL 357
Query: 274 TVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK 333
++ C T L +H QI+K G + L NAL+DMYAKCGS+ ++VF + K
Sbjct: 358 AIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK 417
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
DL SW++M+ Y ++G +A+++F MI+ D + F+++LS C+H+GL E Q F
Sbjct: 418 DLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF 477
Query: 394 NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNV 453
Y + +LEHYAC +++LGR GK+D+A V NMPMK S IW SLL++C G +
Sbjct: 478 TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRL 537
Query: 454 SLA-ETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQ 512
+A + A L + EP+N NYV+LS I+ ++G + + VR +M R + K G S I+
Sbjct: 538 DVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Query: 513 IKQRIHTF 520
+ +I +
Sbjct: 598 PELQIEDY 605
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 7/245 (2%)
Query: 141 GYSRNRLSKEALLVYRDMLARSVEPGNFA--FSVALKACTDVGDS-RVGRAIHAQLAKRD 197
G ++ EAL +Y+ + S+ F +KAC + +G +H K
Sbjct: 19 GLVSDQFYDEALRLYK-LKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAG 77
Query: 198 EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFR 257
+ D VV+N+L+ Y + V +VF+ M R+ VS+ ++I G ++E + +
Sbjct: 78 ADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIK 137
Query: 258 AMQLKEGMGFSWITLTTVLPICAQL-TALHSGKEIHGQIVKSGKKADRPLLN-ALMDMYA 315
M + S + + ++L +C ++ ++ + H ++ + + LL+ AL+DMY
Sbjct: 138 EMYFYGFIPKSEL-VASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYL 196
Query: 316 KCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVS 375
K VFD ME K+ SW M++G N E +DLF M R N+RP+ +T +S
Sbjct: 197 KFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLS 256
Query: 376 LLSGC 380
+L C
Sbjct: 257 VLPAC 261
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 266 GFSWITLTTVLPICA-QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
GF+ I L +V+ CA Q G ++H +K+G D + N+L+ MYAK +
Sbjct: 44 GFTAI-LPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVR 102
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
KVFD M +D S+ +++ +G + +A+ L EM P SLL+ C+ G
Sbjct: 103 KVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMG 162
Query: 385 LTSEGQKFFN--LMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGS 442
+S+ + F+ ++ D +Q S+ LVD+ + A V M +K S W +
Sbjct: 163 SSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVS-WTA 221
Query: 443 LLNSCRLDGNVSL 455
+++ C + N +
Sbjct: 222 MISGCVANQNYEM 234
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 248/481 (51%), Gaps = 47/481 (9%)
Query: 68 QLLHLCISRKSL-EHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRL---DEARRVF 123
+LLH +R L E L +H LH ++ + S+CG L D A RVF
Sbjct: 9 RLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAH---------FISICGSLSNSDYANRVF 59
Query: 124 QDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS 183
++P V+ AM YS E+L + M +R + + ++ LK+C+ + D
Sbjct: 60 S-HIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDL 118
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
R G+ +H +L + + ++ Y G GD +VF+ M +RNVV WN +I GF
Sbjct: 119 RFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGF 178
Query: 244 SGQGKVFETLDAFRAMQ------------------------------LKEGMGFSWITLT 273
G V L F+ M + +G T+
Sbjct: 179 CDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVV 238
Query: 274 TVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL-NALMDMYAKCGSIGYCKKVFDGMES 332
TVLPI A L L +GK IH SG D + NAL+D Y K G + +F M+
Sbjct: 239 TVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQR 298
Query: 333 KDLTSWNTMLAGYSINGQIEKAIDLFDEMIR-SNIRPDGITFVSLLSGCSHSGLTSEGQK 391
+++ SWNT+++G ++NG+ E IDLFD MI + P+ TF+ +L+ CS++G G++
Sbjct: 299 RNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEE 358
Query: 392 FFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD 450
F LM + + ++ EHY +VD++ RSG++ EA +NMP+ + ++WGSLL++CR
Sbjct: 359 LFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSH 418
Query: 451 GNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSW 510
G+V LAE AA L +IEP N+GNYV+LSN+YA+ G W+ V++VR +M ++K G S
Sbjct: 419 GDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQST 478
Query: 511 I 511
I
Sbjct: 479 I 479
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/470 (31%), Positives = 251/470 (53%), Gaps = 71/470 (15%)
Query: 111 SVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAF 170
SV G L A ++F DE P S+ + G +++ ++ + +Y +M R V P + F
Sbjct: 57 SVPGALKYAHKLF-DEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTF 115
Query: 171 SVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSG----------- 219
+ LKAC+ + G A H ++ + ++ V NAL+ F+ CG G
Sbjct: 116 TFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAK 175
Query: 220 --------------------DVLRVFEVMP------------------------------ 229
+ +R+F+ MP
Sbjct: 176 AHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 230 -QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSG 288
+++VV+WN +I+G+ G E L F+ M+ G +T+ ++L CA L L +G
Sbjct: 236 TEKDVVTWNAMISGYVNCGYPKEALGIFKEMR-DAGEHPDVVTILSLLSACAVLGDLETG 294
Query: 289 KEIHGQI-----VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLA 343
K +H I V S P+ NAL+DMYAKCGSI +VF G++ +DL++WNT++
Sbjct: 295 KRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIV 354
Query: 344 GYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQ 402
G +++ E +I++F+EM R + P+ +TF+ ++ CSHSG EG+K+F+LM+D Y ++
Sbjct: 355 GLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIE 413
Query: 403 PSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAER 462
P+++HY C+VD+LGR+G+L+EA +M ++ + +W +LL +C++ GNV L + A E+
Sbjct: 414 PNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEK 473
Query: 463 LFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQ 512
L + + +G+YV+LSNIYA G W+GV++VR+M +KK G S I+
Sbjct: 474 LLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 148/327 (45%), Gaps = 27/327 (8%)
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL 282
++F+ +P+ +V N ++ G + K +T+ + M+ K G+ T T VL C++L
Sbjct: 67 KLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEME-KRGVSPDRYTFTFVLKACSKL 125
Query: 283 TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTML 342
+G HG++V+ G + + NAL+ +A CG +G ++FD +W++M
Sbjct: 126 EWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMT 185
Query: 343 AGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQ 402
+GY+ G+I++A+ LFDEM D + + +++GC ++ F D +
Sbjct: 186 SGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELF----DRFTE 237
Query: 403 PSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGS-----IWGSLLNSCRLDGNVSLAE 457
+ + ++ G EAL + + M+ +G SLL++C + G++ +
Sbjct: 238 KDVVTWNAMISGYVNCGYPKEALGIFKE--MRDAGEHPDVVTILSLLSACAVLGDLETGK 295
Query: 458 TAAERLFEIEPNNAGNYV------MLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWI 511
+ E ++ YV L ++YA G + R + RG+K +W
Sbjct: 296 RLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSID-----RAIEVFRGVKDRDLSTWN 350
Query: 512 QIKQRIHTFVAGGSSDFRSSAEYLKIW 538
+ + A GS + + LK+W
Sbjct: 351 TLIVGLALHHAEGSIEMFEEMQRLKVW 377
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 126/333 (37%), Gaps = 64/333 (19%)
Query: 289 KEIHGQIVKSGKKADRPLLNALMDMYAKC----GSIGYCKKVFDGMESKDLTSWNTMLAG 344
K+IH +V +G ++ ++ L+ Y+ G++ Y K+FD + D++ N +L G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRG 86
Query: 345 YSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKF--------FNLM 396
+ + + EK + L+ EM + + PD TF +L CS S G F F L
Sbjct: 87 SAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLN 146
Query: 397 Q--------------DYGVQPSLEH---------YACLVDILGRSGKLDEALTVARNMPM 433
+ D G+ L ++ + + GK+DEA+ + MP
Sbjct: 147 EYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPY 206
Query: 434 KLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRV 493
K W ++ C + A +R E + + + + Y + G
Sbjct: 207 K-DQVAWNVMITGCLKCKEMDSARELFDRFTE---KDVVTWNAMISGYVNCGY------P 256
Query: 494 REMMAIRGIKKDAG--------------CSW---IQIKQRIHTFVAGGSSDFRSSAEYLK 536
+E + I +DAG C+ ++ +R+H ++ +S S
Sbjct: 257 KEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTP 316
Query: 537 IWNALSNAIKDSGYIPNTDVVLHDINEEMKVMW 569
IWNAL + G I V + + W
Sbjct: 317 IWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTW 349
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/431 (32%), Positives = 240/431 (55%), Gaps = 5/431 (1%)
Query: 101 TLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
T+ + +I+ Y+ CG + +A+RVF W +M G+S++ L + A ++ M
Sbjct: 239 TICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQR 298
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVE--CGCS 218
VE + ++ L AC+ G+++H + K+ E NAL+ Y++ G
Sbjct: 299 HWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTM 358
Query: 219 GDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPI 278
D L +FE + ++++SWN++I GF+ +G + + F ++ E + + +L
Sbjct: 359 EDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE-IKVDDYAFSALLRS 417
Query: 279 CAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT-S 337
C+ L L G++IH KSG ++ ++++L+ MY+KCG I +K F + SK T +
Sbjct: 418 CSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVA 477
Query: 338 WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ 397
WN M+ GY+ +G + ++DLF +M N++ D +TF ++L+ CSH+GL EG + NLM+
Sbjct: 478 WNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLME 537
Query: 398 D-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
Y +QP +EHYA VD+LGR+G +++A + +MP+ + + L CR G + +A
Sbjct: 538 PVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMA 597
Query: 457 ETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQR 516
A L EIEP + YV LS++Y+D WE V++MM RG+KK G SWI+I+ +
Sbjct: 598 TQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQ 657
Query: 517 IHTFVAGGSSD 527
+ F A S+
Sbjct: 658 VKAFNAEDRSN 668
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 160/341 (46%), Gaps = 4/341 (1%)
Query: 97 IENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYR 156
I + + ++++ Y G L A +F DE W M GY+ ++A ++
Sbjct: 32 ISDIYVSNRILDSYIKFGFLGYANMLF-DEMPKRDSVSWNTMISGYTSCGKLEDAWCLFT 90
Query: 157 DMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECG 216
M + ++FS LK V +G +H + K E + V ++L+ Y +C
Sbjct: 91 CMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCE 150
Query: 217 CSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL 276
D F+ + + N VSWN LIAGF + M++K + T +L
Sbjct: 151 RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 277 PICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM-ESKDL 335
+ + K++H +++K G + + + NA++ YA CGS+ K+VFDG+ SKDL
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDL 270
Query: 336 TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNL 395
SWN+M+AG+S + E A +LF +M R + D T+ LLS CS G+ +
Sbjct: 271 ISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGM 330
Query: 396 MQDYGVQPSLEHYACLVDILGR--SGKLDEALTVARNMPMK 434
+ G++ L+ + + +G +++AL++ ++ K
Sbjct: 331 VIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK 371
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQI 351
H +K G +D + N ++D Y K G +GY +FD M +D SWNTM++GY+ G++
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 352 EKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACL 411
E A LF M RS DG +F LL G + G++ L+ G + ++ + L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 412 VDILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
VD+ + ++++A + + S S W +L+
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVS-WNALI 174
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDED--ISQLLHLCISRKSLEHGQKLHQHLLH 91
N + + G E+A++ + + +D S LL C +L+ GQ++H L
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA--LA 434
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
+K + N + S LI +YS CG ++ AR+ FQ W AM +GY+++ L + +
Sbjct: 435 TKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVS 494
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVG 181
L ++ M ++V+ + F+ L AC+ G
Sbjct: 495 LDLFSQMCNQNVKLDHVTFTAILTACSHTG 524
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 235/422 (55%), Gaps = 11/422 (2%)
Query: 99 NPTLKSKLI-TLYSVCGRLDEARRVFQD------EEEDPPESVWVAMAIGYSRNRLSKEA 151
+P ++KL+ TL S C L RR+ D ++ P +W + Y R+ +A
Sbjct: 42 SPQDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDA 101
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
+ VY M+ +V P ++ + +KA + D +G+ +H+ + D+ + +
Sbjct: 102 IQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITL 161
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
Y + G + +VF+ P+R + SWN +I G + G+ E ++ F M+ + G+ T
Sbjct: 162 YCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMK-RSGLEPDDFT 220
Query: 272 LTTVLPICAQLTALHSGKEIHGQIV--KSGKKADRPLLNALMDMYAKCGSIGYCKKVFDG 329
+ +V C L L ++H ++ K+ +K+D +LN+L+DMY KCG + +F+
Sbjct: 221 MVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEE 280
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG 389
M +++ SW++M+ GY+ NG +A++ F +M +RP+ ITFV +LS C H GL EG
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
Query: 390 QKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCR 448
+ +F +M+ ++ ++P L HY C+VD+L R G+L EA V MPMK + +WG L+ C
Sbjct: 341 KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCE 400
Query: 449 LDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGC 508
G+V +AE A + E+EP N G YV+L+N+YA GMW+ V+RVR++M + + K
Sbjct: 401 KFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAY 460
Query: 509 SW 510
S+
Sbjct: 461 SY 462
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 5/220 (2%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQHLLH 91
N + L +G+ EA+ + + + +D + + C L +LH+ +L
Sbjct: 187 NAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQ 246
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
+K + + + LI +Y CGR+D A +F++ + S W +M +GY+ N + EA
Sbjct: 247 AKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVS-WSSMIVGYAANGNTLEA 305
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDE-EADQVVNNALLR 210
L +R M V P F L AC G G+ A + E E ++
Sbjct: 306 LECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVD 365
Query: 211 FYVECGCSGDVLRVFEVMPQR-NVVSWNTLIAGFSGQGKV 249
G + +V E MP + NV+ W L+ G G V
Sbjct: 366 LLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDV 405
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 258/502 (51%), Gaps = 39/502 (7%)
Query: 67 SQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKL-ITLYSVCGRLDEARRVFQD 125
S L H C KS+ K+H LL + G E P + L + S G +D A + F
Sbjct: 12 SILRHQC---KSMSELYKIHT-LLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYK-FLS 66
Query: 126 EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV 185
+ DPP W + G+S +R ++++ VY ML + P + + +K+ + + + ++
Sbjct: 67 KLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKL 126
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVEC----------------------------GC 217
G ++H + K E D + N L+ Y
Sbjct: 127 GGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAK 186
Query: 218 SGDVLR---VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
SGDV+ VF+ M +R+VV+W+++I G+ +G+ + L+ F M + +T+ +
Sbjct: 187 SGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVS 246
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF--DGMES 332
V+ CA L AL+ GK +H I+ L +L+DMYAKCGSIG VF ++
Sbjct: 247 VICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE 306
Query: 333 KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKF 392
D WN ++ G + +G I +++ LF +M S I PD ITF+ LL+ CSH GL E F
Sbjct: 307 TDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHF 366
Query: 393 FNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGN 452
F +++ G +P EHYAC+VD+L R+G + +A MP+K +GS+ G+LLN C GN
Sbjct: 367 FKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGN 426
Query: 453 VSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQ 512
+ LAET ++L E++P+N G YV L+N+YA + + +RE M +G+KK AG S +
Sbjct: 427 LELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILD 486
Query: 513 IKQRIHTFVAGGSSDFRSSAEY 534
+ H F+A + F S Y
Sbjct: 487 LDGTRHRFIAHDKTHFHSDKIY 508
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/481 (30%), Positives = 250/481 (51%), Gaps = 40/481 (8%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARS-VE 164
+IT Y+ C ++ AR+VF DE + W +M GYS++ ++ +Y+ MLA S +
Sbjct: 173 MITYYTKCDNIESARKVF-DEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFK 231
Query: 165 PGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRV 224
P +AC D G +H ++ + + D + NA++ FY +CG +
Sbjct: 232 PNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARAL 291
Query: 225 FEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS-W-------------- 269
F+ M +++ V++ +I+G+ G V E + F M E +G S W
Sbjct: 292 FDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM---ESIGLSTWNAMISGLMQNNHHE 348
Query: 270 ------------------ITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALM 311
+TL+++LP + L GKEIH +++G + + +++
Sbjct: 349 EVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSII 408
Query: 312 DMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGI 371
D YAK G + ++VFD + + L +W ++ Y+++G + A LFD+M +PD +
Sbjct: 409 DNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDV 468
Query: 372 TFVSLLSGCSHSGLTSEGQKFFN-LMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARN 430
T ++LS +HSG + Q F+ ++ Y ++P +EHYAC+V +L R+GKL +A+
Sbjct: 469 TLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISK 528
Query: 431 MPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGV 490
MP+ +WG+LLN + G++ +A A +RLFE+EP N GNY +++N+Y AG WE
Sbjct: 529 MPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEA 588
Query: 491 KRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGY 550
+ VR M G+KK G SWI+ ++ + +F+A SS RS Y +I L ++ D Y
Sbjct: 589 EMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMY-EIIEGLVESMSDKEY 647
Query: 551 I 551
I
Sbjct: 648 I 648
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 175/393 (44%), Gaps = 46/393 (11%)
Query: 83 QKLHQHLLHSKGRVI-----ENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVA 137
+L H+L R++ + L SKLI+ Y+ R +A VF DE + A
Sbjct: 35 HRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVF-DEITVRNAFSYNA 93
Query: 138 MAIGYSRNRLSKEALLVYRDMLARS------VEPGNFAFSVALKA---CTDVGDSRVGRA 188
+ I Y+ + +A ++ + S P + + S LKA C D + R
Sbjct: 94 LLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQ 153
Query: 189 IHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGK 248
+H + + ++D V N ++ +Y +C +VF+ M +R+VVSWN++I+G+S G
Sbjct: 154 VHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGS 213
Query: 249 VFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLN 308
+ ++AM + +T+ +V C Q + L G E+H +++++ + D L N
Sbjct: 214 FEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCN 273
Query: 309 ALMDMYAKCGSIGYCKKVFDGMESKD-------------------------------LTS 337
A++ YAKCGS+ Y + +FD M KD L++
Sbjct: 274 AVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLST 333
Query: 338 WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ 397
WN M++G N E+ I+ F EMIR RP+ +T SLL ++S G++
Sbjct: 334 WNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAI 393
Query: 398 DYGVQPSLEHYACLVDILGRSGKLDEALTVARN 430
G ++ ++D + G L A V N
Sbjct: 394 RNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDN 426
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 228/427 (53%), Gaps = 11/427 (2%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP 165
L + + G + A +VF + E +W +M GY N+ L+ R S E
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNV-VLWTSMINGYLLNK----DLVSARRYFDLSPER 88
Query: 166 GNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVF 225
++ + ++G+ R++ Q+ RD + N +L Y G RVF
Sbjct: 89 DIVLWNTMISGYIEMGNMLEARSLFDQMPCRD----VMSWNTVLEGYANIGDMEACERVF 144
Query: 226 EVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTAL 285
+ MP+RNV SWN LI G++ G+V E L +F+ M + + + T+T VL CA+L A
Sbjct: 145 DDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 286 HSGKEIHGQIVKSG-KKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAG 344
GK +H G K D + NAL+DMY KCG+I +VF G++ +DL SWNTM+ G
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING 264
Query: 345 YSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQP 403
+ +G +A++LF EM S I PD +TFV +L C H GL +G +FN M D+ + P
Sbjct: 265 LAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMP 324
Query: 404 SLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERL 463
+EH C+VD+L R+G L +A+ MP+K IW +LL + ++ V + E A E L
Sbjct: 325 EIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEEL 384
Query: 464 FEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAG 523
++EP N N+VMLSNIY DAG ++ R++ M G KK+AG SWI+ + F +
Sbjct: 385 IKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSS 444
Query: 524 GSSDFRS 530
G R+
Sbjct: 445 GEKHPRT 451
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 31/236 (13%)
Query: 34 NPTLKSLCKSGKLEEAL----RLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHL 89
N +K ++G++ E L R+++ + P D ++ +L C + + G+ +H++
Sbjct: 156 NGLIKGYAQNGRVSEVLGSFKRMVDEGSVVP-NDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 90 LHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSK 149
+ G + +K+ LI +Y CG ++ A VF+ + S W M G + +
Sbjct: 215 -ETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLIS-WNTMINGLAAHGHGT 272
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
EAL ++ +M + P F L AC +G G A + + +++
Sbjct: 273 EALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM---------FTDFSIM 323
Query: 210 RFYVECGCSGDVL----------RVFEVMPQR-NVVSWNTLIAGFSGQGKVFETLD 254
CGC D+L MP + + V W TL+ G KV++ +D
Sbjct: 324 PEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL----GASKVYKKVD 375
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 255/480 (53%), Gaps = 6/480 (1%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHS 92
+N + S +S K +A+RL + ++ S L + L G+++H + L
Sbjct: 421 VNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV-LDCLNLGKQVHGYTL-- 477
Query: 93 KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL 152
K ++ + T+ S L TLYS CG L+E+ ++FQ + W +M G++ +EA+
Sbjct: 478 KSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKD-NACWASMISGFNEYGYLREAI 536
Query: 153 LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFY 212
++ +ML P + L C+ G+ IH + + + +AL+ Y
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMY 596
Query: 213 VECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
+CG +V++ +P+ + VS ++LI+G+S G + + FR M + G +
Sbjct: 597 SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS-GFTMDSFAI 655
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES 332
+++L A G ++H I K G + + ++L+ MY+K GSI C K F +
Sbjct: 656 SSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING 715
Query: 333 KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKF 392
DL +W ++A Y+ +G+ +A+ +++ M +PD +TFV +LS CSH GL E
Sbjct: 716 PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFH 775
Query: 393 FNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG 451
N M +DYG++P HY C+VD LGRSG+L EA + NM +K +WG+LL +C++ G
Sbjct: 776 LNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHG 835
Query: 452 NVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWI 511
V L + AA++ E+EP++AG Y+ LSNI A+ G W+ V+ R++M G++K+ G S +
Sbjct: 836 EVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 168/327 (51%), Gaps = 8/327 (2%)
Query: 99 NPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDM 158
+ ++ + LI++YS G +D + +VF+D ++ +++ M +S+++ +A+ ++ M
Sbjct: 385 DSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRM 444
Query: 159 LARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCS 218
L + F+ L + +G+ +H K D V ++L Y +CG
Sbjct: 445 LQEGLRTDEFSVCSLLSVLDCL---NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSL 501
Query: 219 GDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPI 278
+ ++F+ +P ++ W ++I+GF+ G + E + F M L +G TL VL +
Sbjct: 502 EESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM-LDDGTSPDESTLAAVLTV 560
Query: 279 CAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSW 338
C+ +L GKEIHG +++G L +AL++MY+KCGS+ ++V+D + D S
Sbjct: 561 CSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSC 620
Query: 339 NTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD 398
+++++GYS +G I+ LF +M+ S D S+L + S +S G + +
Sbjct: 621 SSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITK 680
Query: 399 YGV--QPSLEHYACLVDILGRSGKLDE 423
G+ +PS+ + L+ + + G +D+
Sbjct: 681 IGLCTEPSVG--SSLLTMYSKFGSIDD 705
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 192/405 (47%), Gaps = 16/405 (3%)
Query: 46 LEEALRLIESPNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLK 103
EE+LR + ++ +IS ++ C + ++ + + H + E ++
Sbjct: 131 FEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYE--VVE 188
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
S LI ++S R ++A +VF+D W + G RN+ ++ +M
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLS-ANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ 247
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR 223
+P ++ +S L AC + R G+ + A++ K E D V A++ Y +CG + +
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAME 306
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLT 283
VF +P +VVSW +++G++ F L+ F+ M+ G+ + T+T+V+ C + +
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR-HSGVEINNCTVTSVISACGRPS 365
Query: 284 ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF---DGMESKDLTSWNT 340
+ ++H + KSG D + AL+ MY+K G I ++VF D ++ +++ N
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NV 423
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
M+ +S + + KAI LF M++ +R D + SLLS L G++ G
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---GKQVHGYTLKSG 480
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLN 445
+ L + L + + G L+E+ + + +P K + W S+++
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK-DNACWASMIS 524
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 142/321 (44%), Gaps = 3/321 (0%)
Query: 102 LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
L L++ YS G + +A ++F D P M GY ++RL +E+L + M
Sbjct: 86 LTKSLLSWYSNSGSMADAAKLF-DTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFL 144
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV 221
E ++ + AC+ + + K +VV +AL+ + + D
Sbjct: 145 GFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDA 204
Query: 222 LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQ 281
+VF NV WNT+IAG D F M + S+ T ++VL CA
Sbjct: 205 YKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSY-TYSSVLAACAS 263
Query: 282 LTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTM 341
L L GK + +++K G + D + A++D+YAKCG + +VF + + + SW M
Sbjct: 264 LEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 342 LAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGV 401
L+GY+ + A+++F EM S + + T S++S C + E + + G
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 402 QPSLEHYACLVDILGRSGKLD 422
A L+ + +SG +D
Sbjct: 383 YLDSSVAAALISMYSKSGDID 403
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 13/255 (5%)
Query: 184 RVGRAIHAQLAKRDE-EADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAG 242
R + + A L +R D + +LL +Y G D ++F+ +PQ +VVS N +I+G
Sbjct: 65 RTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISG 124
Query: 243 FSGQGKVFETLDAFRAMQLKEGMGF--SWITLTTVLPICAQLTALHSGKEIHGQIVKSGK 300
+ E+L F M +GF + I+ +V+ C+ L A + + +K G
Sbjct: 125 YKQHRLFEESLRFFSKMHF---LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGY 181
Query: 301 KADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDE 360
+ +AL+D+++K KVF S ++ WNT++AG N DLF E
Sbjct: 182 FFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHE 241
Query: 361 MIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEH-YAC--LVDILGR 417
M +PD T+ S+L+ C+ + E +F ++Q ++ E + C +VD+ +
Sbjct: 242 MCVGFQKPDSYTYSSVLAACA----SLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAK 297
Query: 418 SGKLDEALTVARNMP 432
G + EA+ V +P
Sbjct: 298 CGHMAEAMEVFSRIP 312
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 166/555 (29%), Positives = 267/555 (48%), Gaps = 70/555 (12%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRV 96
+ ++G+ +EA + + P ++D S +L R K ++ + +G
Sbjct: 151 ITGFVRAGRFDEA-EFLYAETPVKFRDSVASNVLLSGYLRAG-----KWNEAVRVFQGMA 204
Query: 97 IENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYR 156
++ S ++ Y GR+ +AR +F D + W AM GY + ++ ++
Sbjct: 205 VKEVVSCSSMVHGYCKMGRIVDARSLF-DRMTERNVITWTAMIDGYFKAGFFEDGFGLFL 263
Query: 157 DMLARS-VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVEC 215
M V+ + +V KAC D R G IH +++ E D + N+L+ Y +
Sbjct: 264 RMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKL 323
Query: 216 GCSGDVLRVFEVMPQRNVVSWNTLIAG-------------------------------FS 244
G G+ VF VM ++ VSWN+LI G FS
Sbjct: 324 GYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFS 383
Query: 245 GQGKVFETLDAFRAMQLKEGMGFS-----------------WI-------------TLTT 274
G+G++ + ++ F M K+ + ++ W T ++
Sbjct: 384 GKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSS 443
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKD 334
VL A L L G +IHG++VK D + N+L+ MY KCG+ K+F + +
Sbjct: 444 VLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPN 503
Query: 335 LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFN 394
+ S+NTM++GYS NG +KA+ LF + S P+G+TF++LLS C H G G K+F
Sbjct: 504 IVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFK 563
Query: 395 LMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNV 453
M+ Y ++P +HYAC+VD+LGRSG LD+A + MP K +WGSLL++ + V
Sbjct: 564 SMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRV 623
Query: 454 SLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQI 513
LAE AA++L E+EP++A YV+LS +Y+ G R+ + + IKKD G SWI +
Sbjct: 624 DLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIIL 683
Query: 514 KQRIHTFVAGGSSDF 528
K +H F+AG S
Sbjct: 684 KGEVHNFLAGDESQL 698
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 137/342 (40%), Gaps = 62/342 (18%)
Query: 114 GRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVA 173
G L EA +F+ S W+AM Y+ N +A V+ +M R N +
Sbjct: 64 GNLQEAEAIFRQMSNRSIVS-WIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAM 122
Query: 174 LKACTDVGDS-----------------------RVGRAIHAQLAKRDEEA---DQVVNNA 207
+K D+G + R GR A+ + D V +N
Sbjct: 123 IKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNV 182
Query: 208 LLRFYVECGCSGDVLRVFE-------------------------------VMPQRNVVSW 236
LL Y+ G + +RVF+ M +RNV++W
Sbjct: 183 LLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITW 242
Query: 237 NTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIV 296
+I G+ G + F M+ + + + TL + C G +IHG +
Sbjct: 243 TAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVS 302
Query: 297 KSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAID 356
+ + D L N+LM MY+K G +G K VF M++KD SWN+++ G QI +A +
Sbjct: 303 RMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYE 362
Query: 357 LFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD 398
LF++M D +++ ++ G S G S+ + F +M +
Sbjct: 363 LFEKM----PGKDMVSWTDMIKGFSGKGEISKCVELFGMMPE 400
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 181 GDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLI 240
G+ + AI Q++ R V A++ Y E G +VF+ MP R S+N +I
Sbjct: 64 GNLQEAEAIFRQMSNRS----IVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 241 AGFSGQ----GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIV 296
GK +E + E S+ T+ T + +G+ + +
Sbjct: 120 TAMIKNKCDLGKAYELF-----CDIPEKNAVSYATMITGF--------VRAGRFDEAEFL 166
Query: 297 KSG---KKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEK 353
+ K D N L+ Y + G +VF GM K++ S ++M+ GY G+I
Sbjct: 167 YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 354 AIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
A LFD M N+ IT+ +++ G +G +G F M+ G
Sbjct: 227 ARSLFDRMTERNV----ITWTAMIDGYFKAGFFEDGFGLFLRMRQEG 269
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 308 NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM-IRSNI 366
N+ + +A+ G++ + +F M ++ + SW M++ Y+ NG++ KA +FDEM +R
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 367 RPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALT 426
+ + + + C L + F ++ + V YA ++ R+G+ DEA
Sbjct: 114 SYNAMITAMIKNKCD---LGKAYELFCDIPEKNAVS-----YATMITGFVRAGRFDEAEF 165
Query: 427 VARNMPMKLSGSIWGSLLNSCRL 449
+ P+K S+ ++L S L
Sbjct: 166 LYAETPVKFRDSVASNVLLSGYL 188
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 227/442 (51%), Gaps = 13/442 (2%)
Query: 78 SLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVA 137
+L G+ +H + ++ + +K+ ++ +Y+ + ARRVF D + E W A
Sbjct: 220 ALREGKAVHGYC--TRMGFSNDLVVKTGILDVYAKSKCIIYARRVF-DLDFKKNEVTWSA 276
Query: 138 MAIGYSRNRLSKEALLVYRDMLARS----VEPGNFAFSVALKACTDVGDSRVGRAIHAQL 193
M GY N + KEA V+ ML V P A + L C GD GR +H
Sbjct: 277 MIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYA 334
Query: 194 AKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETL 253
K D V N ++ FY + G D R F + ++V+S+N+LI G + E+
Sbjct: 335 VKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESF 394
Query: 254 DAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDM 313
F M+ G+ TL VL C+ L AL G HG V G + + NALMDM
Sbjct: 395 RLFHEMR-TSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDM 453
Query: 314 YAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITF 373
Y KCG + K+VFD M +D+ SWNTML G+ I+G ++A+ LF+ M + + PD +T
Sbjct: 454 YTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTL 513
Query: 374 VSLLSGCSHSGLTSEGQKFFNLMQ--DYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
+++LS CSHSGL EG++ FN M D+ V P ++HY C+ D+L R+G LDEA M
Sbjct: 514 LAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM 573
Query: 432 PMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVK 491
P + + G+LL++C N L ++++ + + V+LSN Y+ A WE
Sbjct: 574 PFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTE-SLVLLSNTYSAAERWEDAA 632
Query: 492 RVREMMAIRGIKKDAGCSWIQI 513
R+R + RG+ K G SW+ +
Sbjct: 633 RIRMIQKKRGLLKTPGYSWVDV 654
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 188/386 (48%), Gaps = 11/386 (2%)
Query: 68 QLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEE 127
LL CI ++L GQ +HQHLL + + + T+ L LY+ C ++ AR VF DE
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLL-KRSLTLSSSTVLVNLTRLYASCNEVELARHVF-DEI 61
Query: 128 EDPPES--VWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV 185
P + W M Y+ N +++AL +Y ML V P + + LKAC +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
G+ IH+ + D D V AL+ FY +CG ++VF+ MP+R++V+WN +I+GFS
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
+ + + F M+ +G+ + T+ + P + AL GK +HG + G D
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
+ ++D+YAK I Y ++VFD K+ +W+ M+ GY N I++A ++F +M+ ++
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 366 ----IRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKL 421
+ P I + L GC+ G S G+ G L ++ + G L
Sbjct: 302 NVAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSL 359
Query: 422 DEALTVARNMPMKLSGSIWGSLLNSC 447
+A + +K S + SL+ C
Sbjct: 360 CDAFRQFSEIGLKDVIS-YNSLITGC 384
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 111/264 (42%), Gaps = 44/264 (16%)
Query: 170 FSVALKACTDVGDSRVGRAIHAQLAKRD---EEADQVVNNALLRFYVECGCSGDVLRVFE 226
F L+ C + +G+ IH L KR + +VN L R Y C VF+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN--LTRLYASCNEVELARHVFD 59
Query: 227 VMP--QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTA 284
+P + N ++W+ +I ++ + LD + M L G+ + T VL CA L A
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKM-LNSGVRPTKYTYPFVLKACAGLRA 118
Query: 285 LHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAG 344
+ GK IH + S D + AL+D YAKCG
Sbjct: 119 IDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCG-------------------------- 152
Query: 345 YSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS-HSGLTSEGQKFFNLMQDYGVQP 403
++E AI +FDEM + D + + +++SG S H LT F ++ + G+ P
Sbjct: 153 -----ELEMAIKVFDEMPKR----DMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSP 203
Query: 404 SLEHYACLVDILGRSGKLDEALTV 427
+L + LGR+G L E V
Sbjct: 204 NLSTIVGMFPALGRAGALREGKAV 227
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 7/154 (4%)
Query: 47 EEALRLIESPNPTPYQDEDISQLLHL---CISRKSLEHGQKLHQHLLHSKGRVIENPTLK 103
EE+ RL + + DI+ LL + C +L HG H + + V N ++
Sbjct: 391 EESFRLFHEMRTSGIR-PDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAV--NTSIC 447
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
+ L+ +Y+ CG+LD A+RVF + S W M G+ + L KEAL ++ M V
Sbjct: 448 NALMDMYTKCGKLDVAKRVFDTMHKRDIVS-WNTMLFGFGIHGLGKEALSLFNSMQETGV 506
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD 197
P L AC+ G G+ + +++ D
Sbjct: 507 NPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGD 540
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 223/422 (52%), Gaps = 40/422 (9%)
Query: 114 GRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVA 173
G L +ARR+F DE W M GY+R R +A ++ M R+ ++S
Sbjct: 199 GELRDARRLF-DEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERN----TVSWSTM 253
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNV 233
+ + GD + R + ++ +P +NV
Sbjct: 254 VMGYSKAGDMEMARVMFDKMP---------------------------------LPAKNV 280
Query: 234 VSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHG 293
V+W +IAG++ +G + E D + G+ F + ++L C + L G IH
Sbjct: 281 VTWTIIIAGYAEKGLLKEA-DRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS 339
Query: 294 QIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEK 353
+ +S ++ +LNAL+DMYAKCG++ VF+ + KDL SWNTML G ++G ++
Sbjct: 340 ILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKE 399
Query: 354 AIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLV 412
AI+LF M R IRPD +TF+++L C+H+GL EG +F M+ Y + P +EHY CLV
Sbjct: 400 AIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLV 459
Query: 413 DILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAG 472
D+LGR G+L EA+ V + MPM+ + IWG+LL +CR+ V +A+ + L +++P + G
Sbjct: 460 DLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPG 519
Query: 473 NYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSA 532
NY +LSNIYA A WEGV +R M G++K +G S ++++ IH F S +S
Sbjct: 520 NYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQ 579
Query: 533 EY 534
Y
Sbjct: 580 IY 581
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 189/379 (49%), Gaps = 17/379 (4%)
Query: 78 SLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVA 137
+L ++LH ++ + + E+ + KLI+ S+C + + A RVF +E P + +
Sbjct: 31 NLNQVKQLHAQII--RRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQE-PNVHLCNS 87
Query: 138 MAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD 197
+ +++N +A V+ +M + NF + LKAC+ V + +H + K
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 198 EEADQVVNNALLRFYVECGCSG--DVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDA 255
+D V NAL+ Y CG G D +++FE M +R+ VSWN+++ G G++ +
Sbjct: 148 LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRL 207
Query: 256 FRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYA 315
F M ++ + SW T+ C +++ ++ + + + + ++ Y+
Sbjct: 208 FDEMPQRDLI--SWNTMLDGYARCREMSKAF-------ELFEKMPERNTVSWSTMVMGYS 258
Query: 316 KCGSIGYCKKVFDGM--ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITF 373
K G + + +FD M +K++ +W ++AGY+ G +++A L D+M+ S ++ D
Sbjct: 259 KAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAV 318
Query: 374 VSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPM 433
+S+L+ C+ SGL S G + ++++ + + L+D+ + G L +A V ++P
Sbjct: 319 ISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK 378
Query: 434 KLSGSIWGSLLNSCRLDGN 452
K S W ++L+ + G+
Sbjct: 379 KDLVS-WNTMLHGLGVHGH 396
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 18/223 (8%)
Query: 276 LPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDL 335
LP CA L + K++H QI++ D + L+ + C +VF+ ++ ++
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 336 TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNL 395
N+++ ++ N Q +A +F EM R + D T+ LL CS + N
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 396 MQDYGVQPSLEHYACLVDILGRSGKLD--EALTVARNMPMKLSGSIWGSLLNSCRLDGNV 453
++ G+ + L+D R G L +A+ + M + + S W S+L G +
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGGLVKAGEL 201
Query: 454 SLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREM 496
A RLF+ P ++ + M +G R REM
Sbjct: 202 R----DARRLFDEMPQR--------DLISWNTMLDGYARCREM 232
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/458 (32%), Positives = 239/458 (52%), Gaps = 11/458 (2%)
Query: 73 CISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPE 132
C + + G+ +H L K + + + LI +Y+ CG++ AR++F DE +
Sbjct: 142 CAKLEEIGVGRSVHSSLF--KVGLERDVHINHSLIMMYAKCGQVGYARKLF-DEITERDT 198
Query: 133 SVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQ 192
W +M GYS +K+A+ ++R M EP L AC+ +GD R GR +
Sbjct: 199 VSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEM 258
Query: 193 LAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFET 252
+ + + L+ Y +CG RVF M +++ V+W +I +S GK E
Sbjct: 259 AITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEA 318
Query: 253 LDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMD 312
F M+ K G+ TL+TVL C + AL GK+I + + + + L+D
Sbjct: 319 FKLFFEME-KTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVD 377
Query: 313 MYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGIT 372
MY KCG + +VF+ M K+ +WN M+ Y+ G ++A+ LFD M ++ P IT
Sbjct: 378 MYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDIT 434
Query: 373 FVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
F+ +LS C H+GL +G ++F+ M +G+ P +EHY ++D+L R+G LDEA
Sbjct: 435 FIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERF 494
Query: 432 PMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEI-EPNNAGNYVMLSNIYADAGMWEGV 490
P K + ++L +C +V++ E A L E+ E NAGNYV+ SN+ AD MW+
Sbjct: 495 PGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDES 554
Query: 491 KRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDF 528
++R +M RG+ K GCSWI+I+ + F+AG SD+
Sbjct: 555 AKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG--SDY 590
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 215/441 (48%), Gaps = 14/441 (3%)
Query: 63 DEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRV 122
+ D LL CIS L Q Q LLHS +E P LI G + + +
Sbjct: 37 ERDFLFLLKKCISVNQLRQIQA--QMLLHS----VEKPNF---LIPKAVELGDFNYSSFL 87
Query: 123 FQDEEEDPPESVWVAMAIGYSRNRLSKEALL-VYRDMLARSVEPGNFAFSVALKACTDVG 181
F EE P + M G + EA L +YR M ++P F ++ AC +
Sbjct: 88 FSVTEE-PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 182 DSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIA 241
+ VGR++H+ L K E D +N++L+ Y +CG G ++F+ + +R+ VSWN++I+
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMIS 206
Query: 242 GFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKK 301
G+S G + +D FR M+ +EG TL ++L C+ L L +G+ + +
Sbjct: 207 GYSEAGYAKDAMDLFRKME-EEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG 265
Query: 302 ADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM 361
L + L+ MY KCG + ++VF+ M KD +W M+ YS NG+ +A LF EM
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Query: 362 IRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKL 421
++ + PD T ++LS C G G++ + +Q ++ LVD+ G+ G++
Sbjct: 326 EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 385
Query: 422 DEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIY 481
+EAL V MP+K + + W +++ + G+ A +R+ + P++ +LS
Sbjct: 386 EEALRVFEAMPVK-NEATWNAMITAYAHQGHAKEALLLFDRM-SVPPSDITFIGVLSACV 443
Query: 482 ADAGMWEGVKRVREMMAIRGI 502
+ +G + EM ++ G+
Sbjct: 444 HAGLVHQGCRYFHEMSSMFGL 464
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 256/448 (57%), Gaps = 13/448 (2%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP 165
L+ +YS CG + ++ VF E S W M + +N L E L++ +M + +
Sbjct: 359 LMVMYSRCGSVHKSFGVFLSMRERDVVS-WNTMISAFVQNGLDDEGLMLVYEMQKQGFKI 417
Query: 166 GNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVF 225
+ L A +++ + +G+ HA L ++ + + + N+ L+ Y + G ++F
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSGLIRISQKLF 476
Query: 226 EV--MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLT 283
E +R+ +WN++I+G++ G +T FR M L++ + + +T+ ++LP C+Q+
Sbjct: 477 EGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM-LEQNIRPNAVTVASILPACSQIG 535
Query: 284 ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLA 343
++ GK++HG ++ + + +AL+DMY+K G+I Y + +F + ++ ++ TM+
Sbjct: 536 SVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMIL 595
Query: 344 GYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQ 402
GY +G E+AI LF M S I+PD ITFV++LS CS+SGL EG K F M++ Y +Q
Sbjct: 596 GYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQ 655
Query: 403 PSLEHYACLVDILGRSGKLDEALTVARNMPMKLS-GSIWGSLLNSCRLDGNVSLAETAAE 461
PS EHY C+ D+LGR G+++EA + + + + +WGSLL SC+L G + LAET +E
Sbjct: 656 PSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSE 715
Query: 462 RL--FEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHT 519
RL F+ N +G V+LSN+YA+ W+ V +VR M +G+KK+ G S I+I ++
Sbjct: 716 RLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNC 775
Query: 520 FVAGGSSDFRSSAEYLKIWNALSNAIKD 547
FV+ SS +I++ + KD
Sbjct: 776 FVSRDQEHPHSS----EIYDVIDGLAKD 799
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 155/308 (50%), Gaps = 18/308 (5%)
Query: 98 ENPTLKSKLITLYSVC--GRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVY 155
+ P+++S+L +C G AR++F D P +W + IG+ N L EALL Y
Sbjct: 38 QTPSIRSRL---SKICQDGNPQLARQLF-DAIPKPTTVLWNTIIIGFICNNLPHEALLFY 93
Query: 156 RDM--LARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYV 213
M A + +S LKAC + + + G+A+H L + + + +VV+N+L+ YV
Sbjct: 94 SRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYV 153
Query: 214 ECGCSGD------VLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
C + D V +VF+ M ++NVV+WNTLI+ + G+ E F M E +
Sbjct: 154 SCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME-VKP 212
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKK--ADRPLLNALMDMYAKCGSIGYCKK 325
S ++ V P + ++ +G ++K G + D ++++ + MYA+ G I ++
Sbjct: 213 SPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRR 272
Query: 326 VFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN-IRPDGITFVSLLSGCSHSG 384
VFD +++ WNTM+ Y N + ++I+LF E I S I D +T++ S S
Sbjct: 273 VFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQ 332
Query: 385 LTSEGQKF 392
G++F
Sbjct: 333 QVELGRQF 340
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 206/494 (41%), Gaps = 59/494 (11%)
Query: 30 PPPLNPT-------LKSLCKSGKLEEALRLIES-PNPT---------------------- 59
PP L P L +C+ G + A +L ++ P PT
Sbjct: 32 PPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALL 91
Query: 60 ---------PYQDED---ISQLLHLCISRKSLEHGQKLHQHL---LHSKGRVIENPTLKS 104
P+ + D S L C K+L+ G+ +H HL L + RV+ N +
Sbjct: 92 FYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNM 151
Query: 105 KLITLYSV-CGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
+ L + C D R+VF D W + Y + + EA + M+ V
Sbjct: 152 YVSCLNAPDCFEYDVVRKVF-DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEV 210
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEE--ADQVVNNALLRFYVECGCSGDV 221
+P +F A + + + + K +E D V ++ + Y E G
Sbjct: 211 KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESS 270
Query: 222 LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAF-RAMQLKEGMGFSWITLTTVLPICA 280
RVF+ +RN+ WNT+I + + E+++ F A+ KE + +T +
Sbjct: 271 RRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVS-DEVTYLLAASAVS 329
Query: 281 QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNT 340
L + G++ HG + K+ ++ ++N+LM MY++CGS+ VF M +D+ SWNT
Sbjct: 330 ALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNT 389
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
M++ + NG ++ + L EM + + D IT +LLS S+ G++ + G
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Query: 401 VQ-PSLEHYACLVDILGRSG--KLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAE 457
+Q + Y L+D+ +SG ++ + L + + W S+++ +G+
Sbjct: 450 IQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAER-DQATWNSMISGYTQNGHTEKTF 506
Query: 458 TAAERLFE--IEPN 469
++ E I PN
Sbjct: 507 LVFRKMLEQNIRPN 520
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 243/439 (55%), Gaps = 11/439 (2%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
+L C L+ G ++H + KG N ++S L++LY+ CG+++EAR F +E
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSV--EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE 176
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRA 188
S W AM GY+ N + + +++ ML +P F F L+A V +
Sbjct: 177 RDLVS-WNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSE 235
Query: 189 IHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGK 248
+H K + +L+ YV+CG + ++ E +R+++S LI GFS Q
Sbjct: 236 LHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNN 295
Query: 249 -VFETLDAFRAM-QLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGK-KADRP 305
+ D F+ M ++K M + ++++L IC + ++ G++IHG +KS + + D
Sbjct: 296 CTSDAFDIFKDMIRMKTKM--DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVA 353
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
L N+L+DMYAK G I F+ M+ KD+ SW +++AGY +G EKAIDL++ M
Sbjct: 354 LGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER 413
Query: 366 IRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEA 424
I+P+ +TF+SLLS CSH+G T G K ++ M +G++ EH +C++D+L RSG L+EA
Sbjct: 414 IKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA 473
Query: 425 LTVARNMP--MKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYA 482
+ R+ + LS S WG+ L++CR GNV L++ AA +L +EP NY+ L+++YA
Sbjct: 474 YALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYA 533
Query: 483 DAGMWEGVKRVREMMAIRG 501
G W+ R++M G
Sbjct: 534 ANGAWDNALNTRKLMKESG 552
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 187/405 (46%), Gaps = 12/405 (2%)
Query: 83 QKLHQHLLHSKGRVIENP-----TLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVA 137
Q + + LL G I N LK LI LY G + AR++F D W A
Sbjct: 25 QNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLF-DRISKRDVVSWTA 83
Query: 138 MAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD 197
M +SR +ALL++++M V+ F + LK+C D+G + G IH + K +
Sbjct: 84 MISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGN 143
Query: 198 EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFR 257
+ +V +ALL Y CG + F+ M +R++VSWN +I G++ + F+
Sbjct: 144 CAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQ 203
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M L EG T ++L + L E+HG +K G L+ +L++ Y KC
Sbjct: 204 LM-LTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKC 262
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYS-INGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
GS+ K+ +G + +DL S ++ G+S N A D+F +MIR + D + S+
Sbjct: 263 GSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSM 322
Query: 377 LSGCSHSGLTSEGQKFFNL-MQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKL 435
L C+ + G++ ++ ++ + L+D+ +SG++++A+ M K
Sbjct: 323 LKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKD 382
Query: 436 SGSIWGSLLNSCRLDGNVSLAETAAERL--FEIEPNNAGNYVMLS 478
S W SL+ GN A R+ I+PN+ +LS
Sbjct: 383 VRS-WTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 1/205 (0%)
Query: 173 ALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRN 232
ALK C+ + IH ++ + + L+ Y++ G ++F+ + +R+
Sbjct: 18 ALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRD 77
Query: 233 VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIH 292
VVSW +I+ FS G + L F+ M +E + + T +VL C L L G +IH
Sbjct: 78 VVSWTAMISRFSRCGYHPDALLLFKEMH-REDVKANQFTYGSVLKSCKDLGCLKEGMQIH 136
Query: 293 GQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIE 352
G + K + + +AL+ +YA+CG + + FD M+ +DL SWN M+ GY+ N +
Sbjct: 137 GSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACAD 196
Query: 353 KAIDLFDEMIRSNIRPDGITFVSLL 377
+ LF M+ +PD TF SLL
Sbjct: 197 TSFSLFQLMLTEGKKPDCFTFGSLL 221
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 223/399 (55%), Gaps = 3/399 (0%)
Query: 114 GRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVA 173
G ++ RR+F + P S W AM GYS +EA+ +R M ++++P SV
Sbjct: 364 GDVETGRRIFSSIPQ-PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVI 422
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFE-VMPQRN 232
L +C + G+ IH + + + + + + L+ Y EC +F+ + + +
Sbjct: 423 LSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELD 482
Query: 233 VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIH 292
+ WN++I+GF + L FR M + + + TVL C++L +L G++ H
Sbjct: 483 IACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFH 542
Query: 293 GQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIE 352
G +VKSG +D + AL DMY KCG I ++ FD + K+ WN M+ GY NG+ +
Sbjct: 543 GLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGD 602
Query: 353 KAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACL 411
+A+ L+ +MI S +PDGITFVS+L+ CSHSGL G + + MQ +G++P L+HY C+
Sbjct: 603 EAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICI 662
Query: 412 VDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNA 471
VD LGR+G+L++A +A P K S +W LL+SCR+ G+VSLA AE+L ++P ++
Sbjct: 663 VDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSS 722
Query: 472 GNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSW 510
YV+LSN Y+ W+ ++ +M + K G SW
Sbjct: 723 AAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 166/355 (46%), Gaps = 19/355 (5%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP 165
+T G L EA VF E S W M R ++AL+VY+ M+ P
Sbjct: 78 FLTFRCKVGDLGEACEVFDGMPERDVVS-WNNMISVLVRKGFEEKALVVYKRMVCDGFLP 136
Query: 166 GNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV-LRV 224
F + L AC+ V D G H K + + V NALL Y +CG D +RV
Sbjct: 137 SRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRV 196
Query: 225 FEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPI------ 278
FE + Q N VS+ +I G + + KV E + FR M ++G+ + L+ +L I
Sbjct: 197 FESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM-CEKGVQVDSVCLSNILSISAPREG 255
Query: 279 CAQLTALHS---GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDL 335
C L+ ++ GK+IH ++ G D L N+L+++YAK + + +F M ++
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 336 TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNL 395
SWN M+ G+ + +K+++ M S +P+ +T +S+L C SG G++ F+
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS 375
Query: 396 MQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMP---MKLSGSIWGSLLNSC 447
+ QPS+ + ++ +EA++ R M +K + +L+SC
Sbjct: 376 IP----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 155/336 (46%), Gaps = 10/336 (2%)
Query: 34 NPTLKSLCKSGKLEEAL---RLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLL 90
N L EEA+ R ++ N P +S +L C + LE G+++H ++
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKP-DKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 91 HSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKE 150
++ + +N + S LI +YS C +++ + +F D + + W +M G+ N L +
Sbjct: 444 RTE--ISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTK 501
Query: 151 ALLVYRDMLARSVE-PGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
AL+++R M +V P +F+ L +C+ + GR H + K +D V AL
Sbjct: 502 ALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALT 561
Query: 210 RFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSW 269
Y +CG + F+ + ++N V WN +I G+ G+ E + +R M + G
Sbjct: 562 DMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM-ISSGEKPDG 620
Query: 270 ITLTTVLPICAQLTALHSGKEIHGQIVK-SGKKADRPLLNALMDMYAKCGSIGYCKKVFD 328
IT +VL C+ + +G EI + + G + + ++D + G + +K+ +
Sbjct: 621 ITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAE 680
Query: 329 GMESKDLTS-WNTMLAGYSINGQIEKAIDLFDEMIR 363
K + W +L+ ++G + A + ++++R
Sbjct: 681 ATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMR 716
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 159/371 (42%), Gaps = 47/371 (12%)
Query: 88 HLLHSKGRVIENPTLKSKLITLYSVCGRL-DEARRVFQDEEEDPPESVWVAMAIGYSRNR 146
H + K + +N + + L+++Y+ CG + D RVF+ + P E + A+ G +R
Sbjct: 161 HGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ-PNEVSYTAVIGGLAREN 219
Query: 147 LSKEALLVYRDMLARSVEPGNFAFSVALK---------ACTDVGDSRVGRAIHAQLAKRD 197
EA+ ++R M + V+ + S L + +++ + +G+ IH +
Sbjct: 220 KVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLG 279
Query: 198 EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFR 257
D +NN+LL Y + +F MP+ NVVSWN +I GF + + ++++
Sbjct: 280 FGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLT 339
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M+ G + +T +VL C + + +G+
Sbjct: 340 RMR-DSGFQPNEVTCISVLGACFRSGDVETGR---------------------------- 370
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
++F + +++WN ML+GYS E+AI F +M N++PD T +L
Sbjct: 371 -------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVIL 423
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSG 437
S C+ G++ ++ + + + L+ + K++ + + + +L
Sbjct: 424 SSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDI 483
Query: 438 SIWGSLLNSCR 448
+ W S+++ R
Sbjct: 484 ACWNSMISGFR 494
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECG---------------------------CS 218
G+ IH + + ++D + N LL Y+ECG C
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 219 ----GDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
G+ VF+ MP+R+VVSWN +I+ +G + L ++ M + +G S TL +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM-VCDGFLPSRFTLAS 143
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI-GYCKKVFDGMESK 333
VL C+++ G HG VK+G + + NAL+ MYAKCG I Y +VF+ +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLS 378
+ S+ ++ G + ++ +A+ +F M ++ D + ++LS
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 287 SGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYS 346
SGK IHG IV+ G K+D L N L+D+Y +CG Y +KVFD M +D+ SWN L
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 347 INGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLE 406
G + +A ++FD M ++ +++ +++S G + + M G PS
Sbjct: 84 KVGDLGEACEVFDGMPERDV----VSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPS-- 137
Query: 407 HYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETA------- 459
L +L K+ + + M+ G + L+ GN L+ A
Sbjct: 138 -RFTLASVLSACSKVLDGV-----FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD 191
Query: 460 -AERLFE--IEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGC 508
R+FE +PN ++ + + + E V+ R +M +G++ D+ C
Sbjct: 192 YGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFR-LMCEKGVQVDSVC 242
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 168/567 (29%), Positives = 266/567 (46%), Gaps = 74/567 (13%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQHLLH 91
N L S + G +EA+ L + + +D S +L C S +++ G+K+ Q L+
Sbjct: 39 NTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKI-QSLVI 97
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDP-PESVWVAMAIGYSRNRLSKE 150
G P + + LI +Y C A +VF+D D E W ++ Y +
Sbjct: 98 RSGFCASLP-VNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEA 156
Query: 151 ALLVY-------------------------------RDMLARSVEPGNFAFSVALKACT- 178
AL V+ ++ML +P + FS + AC+
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSA 216
Query: 179 DVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR--------------- 223
D + GR +HA + K + N++L FY + G D +R
Sbjct: 217 DSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNS 276
Query: 224 ----------------VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
VF + P++N+V+W T+I G+ G + L F M +K G+
Sbjct: 277 IIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM-MKSGVDS 335
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF 327
VL C+ L L GK IHG ++ G + + NAL+++YAKCG I + F
Sbjct: 336 DHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAF 395
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
+ +KDL SWNTML + ++G ++A+ L+D MI S I+PD +TF+ LL+ CSHSGL
Sbjct: 396 GDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVE 455
Query: 388 EGQKFF-NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLS----GSIWGS 442
EG F ++++DY + ++H C++D+ GR G L EA +A ++ S W +
Sbjct: 456 EGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWET 515
Query: 443 LLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGI 502
LL +C + L ++ L EP+ ++V+LSN+Y G W+ + VR M RG+
Sbjct: 516 LLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGM 575
Query: 503 KKDAGCSWIQIKQRIHTFVAGGSSDFR 529
KK GCSWI++ ++ TFV G SS R
Sbjct: 576 KKTPGCSWIEVGNQVSTFVVGDSSHPR 602
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 162/388 (41%), Gaps = 68/388 (17%)
Query: 102 LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
L SK+ +L + GR+ AR+VF D + W M YSR L +EA+ ++ +
Sbjct: 7 LTSKIASL-AKSGRIASARQVF-DGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFS 64
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECG----- 216
+P +++F+ L C +G+ + GR I + + + A VNN+L+ Y +C
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 217 -----------------CS-----------GDVLRVFEVMPQRNVVSWNTLIAGFSGQGK 248
CS L VF MP+R +WN +I+G + GK
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 249 VFETLDAFRAMQLKEGMGFSWITLTTVLPIC-AQLTALHSGKEIHGQIVKSGKKADRPLL 307
+ L F+ M L+ T ++++ C A + + G+ +H ++K+G +
Sbjct: 185 LESCLSLFKEM-LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 308 NALMDMYAKCGS----------------------IGYCKK---------VFDGMESKDLT 336
N+++ Y K GS I C K VF K++
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIV 303
Query: 337 SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM 396
+W TM+ GY NG E+A+ F EM++S + D + ++L CS L G+ +
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL 363
Query: 397 QDYGVQPSLEHYACLVDILGRSGKLDEA 424
G Q LV++ + G + EA
Sbjct: 364 IHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 162/390 (41%), Gaps = 51/390 (13%)
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL 282
+VF+ MP+ + V+WNT++ +S G E + F ++ + + + T +L CA L
Sbjct: 25 QVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDY-SFTAILSTCASL 83
Query: 283 TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCG------------------SIGYCK 324
+ G++I +++SG A P+ N+L+DMY KC + +C
Sbjct: 84 GNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCS 143
Query: 325 KVFDGMESKDLTS---------------WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPD 369
+F M ++ + WN M++G++ G++E + LF EM+ S +PD
Sbjct: 144 LLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPD 203
Query: 370 GITFVSLLSGCS-HSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVA 428
TF SL++ CS S G+ +M G ++E ++ + G D+A+
Sbjct: 204 CYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMREL 263
Query: 429 RNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEP-NNAGNYVMLSNIYADAGMW 487
++ + L+ W S++++C G E A E +F + P N + + Y G
Sbjct: 264 ESIEV-LTQVSWNSIIDACMKIGET---EKALE-VFHLAPEKNIVTWTTMITGYGRNGDG 318
Query: 488 EGVKRVREMMAIRGIKKDA--------GCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWN 539
E R M G+ D CS + + H + G Y + N
Sbjct: 319 EQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLG--HGKMIHGCLIHCGFQGYAYVGN 376
Query: 540 ALSNAIKDSGYIPNTDVVLHDINEEMKVMW 569
AL N G I D DI + V W
Sbjct: 377 ALVNLYAKCGDIKEADRAFGDIANKDLVSW 406
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 315 AKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFV 374
AK G I ++VFDGM D +WNTML YS G ++AI LF ++ S+ +PD +F
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 375 SLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
++LS C+ G G+K +L+ G SL L+D+ G+ A V R+M
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 435 LSGSI-WGSLL 444
+ W SLL
Sbjct: 135 SRNEVTWCSLL 145
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 235/436 (53%), Gaps = 7/436 (1%)
Query: 79 LEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEE--EDPPESVWV 136
L G++LH ++ K + +P S LI +YS CG L A VF E+ + +VW
Sbjct: 254 LTMGKQLHCCVV--KSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWN 311
Query: 137 AMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKR 196
+M G+ N ++ AL + + + ++ S ALK C + + R+G +H+ +
Sbjct: 312 SMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVS 371
Query: 197 DEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAF 256
E D +V + L+ + G D ++F +P +++++++ LI G G F
Sbjct: 372 GYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLF 431
Query: 257 RAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAK 316
R + +K G+ ++ +L +C+ L +L GK+IHG +K G +++ AL+DMY K
Sbjct: 432 REL-IKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVK 490
Query: 317 CGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
CG I +FDGM +D+ SW ++ G+ NG++E+A F +MI I P+ +TF+ L
Sbjct: 491 CGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGL 550
Query: 377 LSGCSHSGLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKL 435
LS C HSGL E + M+ +YG++P LEHY C+VD+LG++G EA + MP++
Sbjct: 551 LSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEP 610
Query: 436 SGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVRE 495
+IW SLL +C N L AE+L + P++ Y LSN YA GMW+ + +VRE
Sbjct: 611 DKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVRE 670
Query: 496 MMAIRGIKKDAGCSWI 511
G K++G SWI
Sbjct: 671 AAKKLG-AKESGMSWI 685
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 198/426 (46%), Gaps = 41/426 (9%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
I+ L C ++ + G+ + H++ K + +N + + +I++Y L +A +VF D
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVI--KQGISQNVFIANNVISMYVDFRLLSDAHKVF-D 64
Query: 126 EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGN-FAFSVALKACTDVGDSR 184
E + W M GY+ + +A+ +YR ML E N F +S LKAC VGD +
Sbjct: 65 EMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQ 124
Query: 185 VGRAIHAQLAKRDEEADQVVNNALLRFYVE------------------------------ 214
+G ++ ++ K + D V+ N+++ YV+
Sbjct: 125 LGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYC 184
Query: 215 -CGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLT 273
G + + +F MPQ NVVSWN LI+GF +G L+ MQ +EG+ L
Sbjct: 185 KAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQ-REGLVLDGFALP 242
Query: 274 TVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME-- 331
L C+ L GK++H +VKSG ++ ++AL+DMY+ CGS+ Y VF +
Sbjct: 243 CGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 332 -SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQ 390
+ + WN+ML+G+ IN + E A+ L ++ +S++ D T L C + G
Sbjct: 303 VNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGL 362
Query: 391 KFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD 450
+ +L+ G + + LVD+ G + +A + +P K + G L+ C
Sbjct: 363 QVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG-LIRGCVKS 421
Query: 451 GNVSLA 456
G SLA
Sbjct: 422 GFNSLA 427
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
+S +L +C S SL G+++H L KG E P + L+ +Y CG +D +F
Sbjct: 446 VSNILKVCSSLASLGWGKQIHG-LCIKKGYESE-PVTATALVDMYVKCGEIDNGVVLFDG 503
Query: 126 EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVG 181
E S W + +G+ +N +EA + M+ +EP F L AC G
Sbjct: 504 MLERDVVS-WTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSG 558
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 156/480 (32%), Positives = 252/480 (52%), Gaps = 20/480 (4%)
Query: 69 LLHLCISRKSLE--HGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDE 126
L LC S K L HGQ +H L + +I S L S+ L AR +
Sbjct: 19 FLKLCSSIKHLLQIHGQ-IHLSSLQNDSFIISELVRVSSL----SLAKDLAFARTLLLHS 73
Query: 127 EEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVG 186
+ P S W ++ GYS + E++ VY +M R ++P F LKAC G
Sbjct: 74 SDSTP-STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAG 132
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQ 246
R I ++ K + D V N L+ Y C + D +VF+ M +RNVVSWN+++
Sbjct: 133 RQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVEN 192
Query: 247 GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPL 306
GK+ + F M G F T V+ + A L GK +H Q++ + + L
Sbjct: 193 GKLNLVFECFCEMI---GKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRL 249
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR-SN 365
AL+DMYAK G + Y + VF+ M K++ +W+ M+ G + G E+A+ LF +M++ S+
Sbjct: 250 GTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESS 309
Query: 366 IRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEA 424
+RP+ +TF+ +L CSH+GL +G K+F+ M+ + ++P + HY +VDILGR+G+L+EA
Sbjct: 310 VRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEA 369
Query: 425 LTVARNMPMKLSGSIWGSLLNSCRL---DGNVSLAETAAERLFEIEPNNAGNYVMLSNIY 481
+ MP + +W +LL++C + + + + E +RL E+EP +GN V+++N +
Sbjct: 370 YDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRF 429
Query: 482 ADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNAL 541
A+A MW VR +M +KK AG S +++ H F +G + +EY+ I+ L
Sbjct: 430 AEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSG----YDPRSEYVSIYELL 485
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 267/503 (53%), Gaps = 19/503 (3%)
Query: 34 NPTLKSLCKSGKLEEALRLI-----ESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQH 88
N + + G EE L L+ + N T Y + + + ++ +E G +H +
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 89 LLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSR-- 144
+K + + +++ L+ +Y+ G L EA ++F P ++V + AM G+ +
Sbjct: 278 T--AKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLM---PSKNVVTYNAMISGFLQMD 332
Query: 145 ---NRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
+ S EA ++ DM R +EP FSV LKAC+ GR IHA + K + ++D
Sbjct: 333 EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
+ + +AL+ Y G + D ++ F ++++ SW ++I ++ D FR +
Sbjct: 393 EFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL-F 451
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
+ T++ ++ CA AL SG++I G +KSG A + + + MYAK G++
Sbjct: 452 SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMP 511
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
+VF +++ D+ +++ M++ + +G +A+++F+ M I+P+ F+ +L C
Sbjct: 512 LANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571
Query: 382 HSGLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIW 440
H GL ++G K+F M+ DY + P+ +H+ CLVD+LGR+G+L +A + + + W
Sbjct: 572 HGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTW 631
Query: 441 GSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIR 500
+LL+SCR+ + + + AERL E+EP +G+YV+L NIY D+G+ + VRE+M R
Sbjct: 632 RALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDR 691
Query: 501 GIKKDAGCSWIQIKQRIHTFVAG 523
G+KK+ SWI I + H+F
Sbjct: 692 GVKKEPALSWIVIGNQTHSFAVA 714
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 140/297 (47%), Gaps = 12/297 (4%)
Query: 147 LSKEALLVYRDMLARSVEPGNFA-----FSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
++K L YR L+ +P N A + + + G +G+ H + K
Sbjct: 23 ITKRVGLGYR-FLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPC 81
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
+ N LL Y +C G ++F+ MP+RN++S+N+LI+G++ G + ++ F ++
Sbjct: 82 LYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELF--LEA 139
Query: 262 KEG-MGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI 320
+E + T L C + L G+ +HG +V +G L+N L+DMY+KCG +
Sbjct: 140 REANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKL 199
Query: 321 GYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGC 380
+FD + +D SWN++++GY G E+ ++L +M R + S+L C
Sbjct: 200 DQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC 259
Query: 381 S---HSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
+ G +G G++ + L+D+ ++G L EA+ + MP K
Sbjct: 260 CINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK 316
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 168/378 (44%), Gaps = 12/378 (3%)
Query: 56 PNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGR 115
P T E L S+ G+ H H++ K + L + L+ +Y C
Sbjct: 40 PKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMI--KSSLNPCLYLLNNLLNMYCKCRE 97
Query: 116 LDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALK 175
L AR++F E S + ++ GY++ ++A+ ++ + +++ F ++ AL
Sbjct: 98 LGFARQLFDRMPERNIIS-FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 176 ACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVS 235
C + D +G +H + + N L+ Y +CG + +F+ +R+ VS
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 236 WNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICA---QLTALHSGKEIH 292
WN+LI+G+ G E L+ M ++G+ + L +VL C + G IH
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMH-RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH 275
Query: 293 GQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQI- 351
K G + D + AL+DMYAK GS+ K+F M SK++ ++N M++G+ +I
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEIT 335
Query: 352 ----EKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEH 407
+A LF +M R + P TF +L CS + G++ L+ Q
Sbjct: 336 DEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFI 395
Query: 408 YACLVDILGRSGKLDEAL 425
+ L+++ G ++ +
Sbjct: 396 GSALIELYALMGSTEDGM 413
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/462 (29%), Positives = 253/462 (54%), Gaps = 8/462 (1%)
Query: 79 LEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WV 136
LE G+ LH ++ + V + LK+ LIT+Y CG+ + + RV E P + V W
Sbjct: 261 LEMGRMLHCQIVKTGFDV--DMHLKTALITMYLKCGKEEASYRVL---ETIPNKDVVCWT 315
Query: 137 AMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKR 196
M G R +++AL+V+ +ML + + A + + +C +G +G ++H + +
Sbjct: 316 VMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 197 DEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAF 256
D N+L+ Y +CG L +FE M +R++VSWN +I+G++ + + L F
Sbjct: 376 GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 257 RAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAK 316
M+ K T+ ++L C+ AL GK IH +++S + + AL+DMY+K
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSK 495
Query: 317 CGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
CG + ++ FD + KD+ SW ++AGY +G+ + A++++ E + S + P+ + F+++
Sbjct: 496 CGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAV 555
Query: 377 LSGCSHSGLTSEGQKFF-NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKL 435
LS CSH+G+ +G K F ++++D+GV+P+ EH AC+VD+L R+ ++++A + +
Sbjct: 556 LSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRP 615
Query: 436 SGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVRE 495
S + G +L++CR +G + + E + E++P +AG+YV L + +A W+ V
Sbjct: 616 SIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWN 675
Query: 496 MMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKI 537
M G+KK G S I++ + TF +S + LK+
Sbjct: 676 QMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDTVSLLKL 717
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 200/406 (49%), Gaps = 8/406 (1%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGY-SRNRLSKEALLVYRDMLARS 162
+ ++ LY C + +A+ +F D+ E W M GY S +S+ L+YR M
Sbjct: 183 NSMLNLYCKCDHVGDAKDLF-DQMEQRDMVSWNTMISGYASVGNMSEILKLLYR-MRGDG 240
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL 222
+ P F +L + D +GR +H Q+ K + D + AL+ Y++CG
Sbjct: 241 LRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASY 300
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL 282
RV E +P ++VV W +I+G G+ + L F M L+ G S + +V+ CAQL
Sbjct: 301 RVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEM-LQSGSDLSSEAIASVVASCAQL 359
Query: 283 TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTML 342
+ G +HG +++ G D P LN+L+ MYAKCG + +F+ M +DL SWN ++
Sbjct: 360 GSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAII 419
Query: 343 AGYSINGQIEKAIDLFDEM-IRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGV 401
+GY+ N + KA+ LF+EM ++ + D T VSLL CS +G G+ ++ +
Sbjct: 420 SGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFI 479
Query: 402 QPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA-ETAA 460
+P LVD+ + G L+ A ++ K S WG L+ G +A E +
Sbjct: 480 RPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGFHGKGDIALEIYS 538
Query: 461 ERLFE-IEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
E L +EPN+ +LS+ + + +G+K M+ G++ +
Sbjct: 539 EFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPN 584
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 168/363 (46%), Gaps = 7/363 (1%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
LL C S + L G +HQ +L + + + S L+ LY+ G L AR+VF++ E
Sbjct: 52 LLKACASLQRLSFGLSIHQQVLVNGFS--SDFYISSSLVNLYAKFGLLAHARKVFEEMRE 109
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRA 188
W AM YSR + EA + +M + ++PG L ++ +
Sbjct: 110 RDVVH-WTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QC 165
Query: 189 IHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGK 248
+H + D V N++L Y +C GD +F+ M QR++VSWNT+I+G++ G
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225
Query: 249 VFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLN 308
+ E L M+ +G+ T L + + L G+ +H QIVK+G D L
Sbjct: 226 MSEILKLLYRMR-GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 309 ALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRP 368
AL+ MY KCG +V + + +KD+ W M++G G+ EKA+ +F EM++S
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 369 DGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVA 428
S+++ C+ G G + +G L+ + + G LD++L +
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIF 404
Query: 429 RNM 431
M
Sbjct: 405 ERM 407
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 134/286 (46%), Gaps = 4/286 (1%)
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
K+ L + MLA + P F F LKAC + G +IH Q+ +D ++++L
Sbjct: 28 KQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSL 87
Query: 209 LRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS 268
+ Y + G +VFE M +R+VV W +I +S G V E M+ +G+
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRF-QGIKPG 146
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFD 328
+TL +L ++T L +H V G D ++N+++++Y KC +G K +FD
Sbjct: 147 PVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSE 388
ME +D+ SWNTM++GY+ G + + + L M +RPD TF + LS
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 389 GQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
G+ + G + L+ + + GK + + V +P K
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 236 WNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI 295
+N+ I S G + L F +M L + T ++L CA L L G IH Q+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSM-LANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 296 VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAI 355
+ +G +D + ++L+++YAK G + + +KVF+ M +D+ W M+ YS G + +A
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 356 DLFDEMIRSNIRPDGITFVSLLSG 379
L +EM I+P +T + +LSG
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSG 156
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 139/433 (32%), Positives = 226/433 (52%), Gaps = 37/433 (8%)
Query: 135 WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTD-------VGD----- 182
W + +RN EA + DM VEP + F L C D +GD
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGY 98
Query: 183 ----------SRVGRAIHAQLAKRD------------EEADQVVNNALLRFYVECGCSGD 220
VG AI +KR E+ + V N ++ Y+ G +
Sbjct: 99 ACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDN 158
Query: 221 VLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICA 280
++F+ MP+R+++SW +I GF +G E L FR MQ+ G+ ++ + L C
Sbjct: 159 AAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQI-SGVKPDYVAIIAALNACT 217
Query: 281 QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNT 340
L AL G +H ++ K + + N+L+D+Y +CG + + ++VF ME + + SWN+
Sbjct: 218 NLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNS 277
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ-DY 399
++ G++ NG +++ F +M +PD +TF L+ CSH GL EG ++F +M+ DY
Sbjct: 278 VIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDY 337
Query: 400 GVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG-NVSLAET 458
+ P +EHY CLVD+ R+G+L++AL + ++MPMK + + GSLL +C G N+ LAE
Sbjct: 338 RISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAER 397
Query: 459 AAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIH 518
+ L ++ + NYV+LSN+YA G WEG ++R M G+KK G S I+I +H
Sbjct: 398 LMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMH 457
Query: 519 TFVAGGSSDFRSS 531
F+AG ++ ++
Sbjct: 458 VFMAGDNAHVETT 470
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 9/216 (4%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPYQDEDISQL--LHLCISRKSLEHGQKLHQHLLHSKG 94
+ K G EEAL + + + ++ + L+ C + +L G +H+++L
Sbjct: 178 INGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDF 237
Query: 95 RVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLV 154
+ N + + LI LY CG ++ AR+VF + E+ S W ++ +G++ N + E+L+
Sbjct: 238 K--NNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS-WNSVIVGFAANGNAHESLVY 294
Query: 155 YRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNN--ALLRFY 212
+R M + +P F+ AL AC+ VG G + Q+ K D + + L+ Y
Sbjct: 295 FRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-YFQIMKCDYRISPRIEHYGCLVDLY 353
Query: 213 VECGCSGDVLRVFEVMPQR-NVVSWNTLIAGFSGQG 247
G D L++ + MP + N V +L+A S G
Sbjct: 354 SRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 11/179 (6%)
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
S+ SW + + + NG++ +A F +M + + P+ ITF++LLSGC TS +
Sbjct: 33 SETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGD--FTSGSEA 90
Query: 392 FFNLMQDYGVQPSLEHYACLVD--ILG---RSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
+L+ Y + L+ +V I+G + G+ +A V M K S + W ++++
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVT-WNTMIDG 149
Query: 447 CRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
G V + AA+ ++ + ++ + N + G E M I G+K D
Sbjct: 150 YMRSGQV---DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 249/462 (53%), Gaps = 10/462 (2%)
Query: 101 TLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
++ +KLIT Y CG R VF D A+ G N L ++ L ++ M
Sbjct: 191 SVGNKLITSYFKCGCSVSGRGVF-DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRR 249
Query: 161 RSVEPGNFAFSVALKACTDVGDSRV--GRAIHAQLAKRDEEADQVVNNALLRFYVECGCS 218
V P + + AL AC+ G R+ G+ IHA L K E++ + +AL+ Y +CG
Sbjct: 250 GLVHPNSVTYLSALAACS--GSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSI 307
Query: 219 GDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPI 278
D +FE + + VS ++ G + G E + F M L+ G+ ++ VL +
Sbjct: 308 EDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRM-LQAGVEIDANVVSAVLGV 366
Query: 279 CAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSW 338
+L GK++H ++K + + N L++MY+KCG + + VF M ++ SW
Sbjct: 367 SFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSW 426
Query: 339 NTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD 398
N+M+A ++ +G A+ L++EM ++P +TF+SLL CSH GL +G++ N M++
Sbjct: 427 NSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKE 486
Query: 399 -YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAE 457
+G++P EHY C++D+LGR+G L EA + ++P+K IW +LL +C G+ + E
Sbjct: 487 VHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGE 546
Query: 458 TAAERLFEIEPNNAGNYVMLSNIYADAGMW-EGVKRVREMMAIRGIKKDAGCSWIQIKQR 516
AAE+LF+ P+++ +++++NIY+ G W E K ++ M A+ G+ K+ G S I+I+ +
Sbjct: 547 YAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAM-GVTKETGISSIEIEHK 605
Query: 517 IHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVL 558
H+FV ++ A Y + + L + D GY P+ +L
Sbjct: 606 THSFVVEDKLHPQAEAIY-DVLSGLFPVMVDEGYRPDKRFIL 646
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 192/410 (46%), Gaps = 22/410 (5%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAI--GYSRNRLSKEALLVYRDMLAR 161
+ L++LY+ CG+L +A ++F +E P V + G+ RNR ++ ++ + ML
Sbjct: 94 NSLLSLYAKCGKLVDAIKLF---DEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG- 149
Query: 162 SVEPGNF---AFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCS 218
G F ++ L C V + IHA + + V N L+ Y +CGCS
Sbjct: 150 ---SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCS 206
Query: 219 GDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL-KEGMGF-SWITLTTVL 276
VF+ M RNV++ +I+G + ++ E D R L + G+ + +T + L
Sbjct: 207 VSGRGVFDGMSHRNVITLTAVISGLI-ENELHE--DGLRLFSLMRRGLVHPNSVTYLSAL 263
Query: 277 PICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT 336
C+ + G++IH + K G +++ + +ALMDMY+KCGSI +F+ D
Sbjct: 264 AACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEV 323
Query: 337 SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM 396
S +L G + NG E+AI F M+++ + D ++L G++ +L+
Sbjct: 324 SMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLV 383
Query: 397 QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
+ L+++ + G L ++ TV R MP + S W S++ + G+ A
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS-WNSMIAAFARHGHGLAA 442
Query: 457 ETAAERL--FEIEPNNAGNYVMLSNIYADAGMWE-GVKRVREMMAIRGIK 503
E + E++P + ++ L + + G+ + G + + EM + GI+
Sbjct: 443 LKLYEEMTTLEVKPTDV-TFLSLLHACSHVGLIDKGRELLNEMKEVHGIE 491
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 127/254 (50%), Gaps = 14/254 (5%)
Query: 185 VGRAIHAQLAKRDE-----EAD-----QVVNNALLRFYVECGCSGDVLRVFEVMPQRNVV 234
+G +HA + K E +AD VV N+LL Y +CG D +++F+ MP R+V+
Sbjct: 63 LGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVI 122
Query: 235 SWNTLIAGFSGQGKVFETLDAFRAMQLKEGMG-FSWITLTTVLPICAQLTALHSGKEIHG 293
S N + GF + ET F ++ G G F TLT VL +C K IH
Sbjct: 123 SQNIVFYGFL---RNRETESGFVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHA 179
Query: 294 QIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEK 353
+ SG + + N L+ Y KCG + VFDGM +++ + +++G N E
Sbjct: 180 LAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHED 239
Query: 354 AIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVD 413
+ LF M R + P+ +T++S L+ CS S EGQ+ L+ YG++ L + L+D
Sbjct: 240 GLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMD 299
Query: 414 ILGRSGKLDEALTV 427
+ + G +++A T+
Sbjct: 300 MYSKCGSIEDAWTI 313
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 251/477 (52%), Gaps = 9/477 (1%)
Query: 70 LHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED 129
L C + +++G+ +H H++ +G + + + L T+Y+ CG + + +F++ E
Sbjct: 216 LKACAGLRQVKYGKAIHTHVI-VRG-FVTTLCVANSLATMYTECGEMQDGLCLFENMSER 273
Query: 130 PPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAI 189
S W ++ + Y R +A+ + M V P F+ AC + G +
Sbjct: 274 DVVS-WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQL 332
Query: 190 HAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKV 249
H + V+N++++ Y CG +F+ M R+++SW+T+I G+ G
Sbjct: 333 HCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFG 392
Query: 250 FETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNA 309
E F M+ + G + L ++L + + + G+++H + G + + + ++
Sbjct: 393 EEGFKYFSWMR-QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSS 451
Query: 310 LMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPD 369
L++MY+KCGSI +F + D+ S M+ GY+ +G+ ++AIDLF++ ++ RPD
Sbjct: 452 LINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPD 511
Query: 370 GITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVA 428
+TF+S+L+ C+HSG G +FN+MQ+ Y ++P+ EHY C+VD+L R+G+L +A +
Sbjct: 512 SVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMI 571
Query: 429 RNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWE 488
M K +W +LL +C+ G++ AAER+ E++P A V L+NIY+ G E
Sbjct: 572 NEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLE 631
Query: 489 GVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAI 545
VR+ M +G+ K+ G S I+IK + FV+G F +E I+N L A+
Sbjct: 632 EAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSG--DRFHPQSE--DIYNILELAV 684
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 144/322 (44%), Gaps = 8/322 (2%)
Query: 114 GRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDM--LARSVEPGNFAFS 171
G L AR+VF D+ W ++ Y S EAL+++ M + +V P S
Sbjct: 54 GNLRAARQVF-DKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 172 VALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR 231
V LKAC + G ++HA K + V ++LL Y G RVF MP R
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR 172
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
N V+W +I G G+ E L F M E + ++ T L CA L + GK I
Sbjct: 173 NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTY-TFAIALKACAGLRQVKYGKAI 231
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSI--GYCKKVFDGMESKDLTSWNTMLAGYSING 349
H ++ G + N+L MY +CG + G C +F+ M +D+ SW +++ Y G
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLC--LFENMSERDVVSWTSLIVAYKRIG 289
Query: 350 QIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYA 409
Q KA++ F +M S + P+ TF S+ S C+ G++ + G+ SL
Sbjct: 290 QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 410 CLVDILGRSGKLDEALTVARNM 431
++ + G L A + + M
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGM 371
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 128/296 (43%), Gaps = 6/296 (2%)
Query: 60 PYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEA 119
P ++ + + C S L G++LH ++L S G + ++ ++ + ++ +YS CG L A
Sbjct: 307 PPNEQTFASMFSACASLSRLVWGEQLHCNVL-SLG-LNDSLSVSNSMMKMYSTCGNLVSA 364
Query: 120 RRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTD 179
+FQ S W + GY + +E + M +P +FA + L +
Sbjct: 365 SVLFQGMRCRDIIS-WSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGN 423
Query: 180 VGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTL 239
+ GR +HA E + V ++L+ Y +CG + +F + ++VS +
Sbjct: 424 MAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAM 483
Query: 240 IAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKS- 298
I G++ GK E +D F LK G +T +VL C L G + ++
Sbjct: 484 INGYAEHGKSKEAIDLFEK-SLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETY 542
Query: 299 GKKADRPLLNALMDMYAKCGSIGYCKKVFDGME-SKDLTSWNTMLAGYSINGQIEK 353
+ + ++D+ + G + +K+ + M KD W T+L G IE+
Sbjct: 543 NMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIER 598
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 4/276 (1%)
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE-G 264
N+ LR + G +VF+ MP ++VSW ++I + E L F AM++ +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 265 MGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
+ L+ VL C Q + + G+ +H VK+ + + ++L+DMY + G I
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
+VF M ++ +W ++ G G+ ++ + F EM RS D TF L C+
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 385 LTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
G+ + G +L L + G++ + L + NM + S W SL+
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVS-WTSLI 282
Query: 445 NSC-RLDGNVSLAETAAE-RLFEIEPNNAGNYVMLS 478
+ R+ V ET + R ++ PN M S
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFS 318
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 251/486 (51%), Gaps = 39/486 (8%)
Query: 47 EEALRLIESPN--PTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKS 104
+E LR SP+ PY +L C + ++ G +H ++ + V N + +
Sbjct: 96 QEMLRKGYSPDYFTFPY-------VLKACSGLRDIQFGSCVHGFVVKTGFEV--NMYVST 146
Query: 105 KLITLYSVCGRLDEARRVFQDEEEDPPE---SVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
L+ +Y CG ++ RVF ED P+ W ++ G+ N +A+ +R+M +
Sbjct: 147 CLLHMYMCCGEVNYGLRVF----EDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLA--------KRDEEADQVVNNALLRFYV 213
V+ L AC D G+ H L + + ++ +L+ Y
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 214 ECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLT 273
+CG +F+ MP+R +VSWN++I G+S G E L F M L G+ +T
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM-LDLGIAPDKVTFL 321
Query: 274 TVLPI-----CAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFD 328
+V+ C+QL G+ IH + K+G D ++ AL++MYAK G KK F+
Sbjct: 322 SVIRASMIQGCSQL-----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFE 376
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMI-RSNIRPDGITFVSLLSGCSHSGLTS 387
+E KD +W ++ G + +G +A+ +F M + N PDGIT++ +L CSH GL
Sbjct: 377 DLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVE 436
Query: 388 EGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
EGQ++F M+D +G++P++EHY C+VDIL R+G+ +EA + + MP+K + +IWG+LLN
Sbjct: 437 EGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
Query: 447 CRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
C + N+ L + + E E +G YV+LSNIYA AG W VK +RE M + + K
Sbjct: 497 CDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVL 556
Query: 507 GCSWIQ 512
G S ++
Sbjct: 557 GHSSVE 562
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 178/358 (49%), Gaps = 13/358 (3%)
Query: 88 HLLHSKGRVIENPTLKSKLITLYSVCGR---LDEARRVFQDEEEDPPESVWVAMAIGYSR 144
H L K VI N S+LI + C L AR VF+ + P +W +M GYS
Sbjct: 26 HGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE-SIDCPSVYIWNSMIRGYSN 84
Query: 145 NRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVV 204
+ +AL+ Y++ML + P F F LKAC+ + D + G +H + K E + V
Sbjct: 85 SPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYV 144
Query: 205 NNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEG 264
+ LL Y+ CG LRVFE +PQ NVV+W +LI+GF + + ++AFR MQ G
Sbjct: 145 STCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQ-SNG 203
Query: 265 MGFSWITLTTVLPICAQLTALHSGKEIHGQI--------VKSGKKADRPLLNALMDMYAK 316
+ + + +L C + + +GK HG + +S + L +L+DMYAK
Sbjct: 204 VKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAK 263
Query: 317 CGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
CG + + +FDGM + L SWN+++ GYS NG E+A+ +F +M+ I PD +TF+S+
Sbjct: 264 CGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSV 323
Query: 377 LSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
+ G + GQ + G LV++ ++G + A ++ K
Sbjct: 324 IRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 381
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 202/378 (53%), Gaps = 33/378 (8%)
Query: 170 FSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMP 229
FS+ALK+C +G ++HA K + ++ V ALL Y +C ++F+ +P
Sbjct: 51 FSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIP 110
Query: 230 QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL---------------------------- 261
QRN V WN +I+ ++ GKV E ++ + AM +
Sbjct: 111 QRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFY 170
Query: 262 KEGMGFSW----ITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
++ + F + ITL ++ C+ + A KEIH ++ + L + L++ Y +C
Sbjct: 171 RKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRC 230
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
GSI Y + VFD ME +D+ +W+++++ Y+++G E A+ F EM + + PD I F+++L
Sbjct: 231 GSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVL 290
Query: 378 SGCSHSGLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLS 436
CSH+GL E +F MQ DYG++ S +HY+CLVD+L R G+ +EA V + MP K +
Sbjct: 291 KACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPT 350
Query: 437 GSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREM 496
WG+LL +CR G + LAE AA L +EP N NYV+L IY G E +R+R
Sbjct: 351 AKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLK 410
Query: 497 MAIRGIKKDAGCSWIQIK 514
M G+K G SW K
Sbjct: 411 MKESGVKVSPGSSWCLFK 428
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 146/341 (42%), Gaps = 19/341 (5%)
Query: 78 SLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVA 137
S+ H +KL + N + + +I+ Y+ CG++ EA +++ + P ES + A
Sbjct: 98 SVSHARKLFDEIPQ------RNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNA 151
Query: 138 MAIGY-SRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKR 196
+ G S A+ YR M+ +P + AC+ +G R+ + IH+ +
Sbjct: 152 IIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRN 211
Query: 197 DEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAF 256
E + + L+ Y CG V VF+ M R+VV+W++LI+ ++ G L F
Sbjct: 212 LIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTF 271
Query: 257 RAMQLKEGMGFSWITLTTVLPICAQL----TALHSGKEIHGQIVKSGKKADRPLLNALMD 312
+ M+L + + I VL C+ AL K + G G +A + + L+D
Sbjct: 272 QEMELAK-VTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDY---GLRASKDHYSCLVD 327
Query: 313 MYAKCGSIGYCKKVFDGMESKDLT-SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGI 371
+ ++ G KV M K +W +L G+IE A E++ + P+
Sbjct: 328 VLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLM--VEPENP 385
Query: 372 TFVSLLSGCSHS-GLTSEGQKFFNLMQDYGVQPSLEHYACL 411
LL S G E ++ M++ GV+ S CL
Sbjct: 386 ANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCL 426
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 117/269 (43%), Gaps = 37/269 (13%)
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
++S ++ ++ QG + L+ F M + + L CA G +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQI 351
H VKS ++ + AL+DMY KC S+ + +K+FD + ++ WN M++ Y+ G++
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 352 EKAIDLFD---------------------------------EMIRSNIRPDGITFVSLLS 378
++A++L++ +MI +P+ IT ++L+S
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 379 GCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGS 438
CS G ++ + ++P + + LV+ GR G + V +M +
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR-DVV 249
Query: 439 IWGSLLNSCRLDGNVSLAETAAERLFEIE 467
W SL+++ L G+ AE+A + E+E
Sbjct: 250 AWSSLISAYALHGD---AESALKTFQEME 275
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/429 (33%), Positives = 237/429 (55%), Gaps = 16/429 (3%)
Query: 91 HSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKE 150
+ K ++ N T+ T+YS A +VF+ EE + W M Y++ +L K
Sbjct: 319 YEKYTLVSNATM-----TMYSSFEDFGAAHKVFESLEEKDLVT-WNTMISSYNQAKLGKS 372
Query: 151 ALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLR 210
A+ VY+ M V+P F F L D+ V + A + K + ++NAL+
Sbjct: 373 AMSVYKRMHIIGVKPDEFTFGSLLATSLDLD---VLEMVQACIIKFGLSSKIEISNALIS 429
Query: 211 FYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF-SW 269
Y + G +FE ++N++SWN +I+GF G FE L+ F + E
Sbjct: 430 AYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDA 489
Query: 270 ITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDG 329
TL+T+L IC ++L G + H +++ G+ + + NAL++MY++CG+I +VF+
Sbjct: 490 YTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQ 549
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMI-RSNIRPDGITFVSLLSGCSHSGLTSE 388
M KD+ SWN++++ YS +G+ E A++ + M + PD TF ++LS CSH+GL E
Sbjct: 550 MSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEE 609
Query: 389 GQKFFNLMQDY-GVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGS---IWGSLL 444
G + FN M ++ GV +++H++CLVD+LGR+G LDEA ++ + + K GS +W +L
Sbjct: 610 GLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVK-ISEKTIGSRVDVWWALF 668
Query: 445 NSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKK 504
++C G++ L + A+ L E E ++ YV LSNIYA AGMW+ + R + + G K
Sbjct: 669 SACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMK 728
Query: 505 DAGCSWIQI 513
GCSW+++
Sbjct: 729 QRGCSWMRL 737
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 214/497 (43%), Gaps = 66/497 (13%)
Query: 90 LHSKGRVIENPTLKS--KLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRL 147
L K I+ P + S L++ G ++ A VF E ++W AM G +
Sbjct: 111 LKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGY 170
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNA 207
+ ++ ++R+M V F F+ L C D G G+ +H+ + K V NA
Sbjct: 171 HETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNA 229
Query: 208 LLRFYVECGCSGDVLRVFEV--MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
L+ Y C D VFE + R+ V++N +I G +G K E+L FR M L+ +
Sbjct: 230 LITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAG-FKRDESLLVFRKM-LEASL 287
Query: 266 GFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKK 325
+ +T +V+ C + G ++HG +K+G + + NA M MY+ G K
Sbjct: 288 RPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHK 344
Query: 326 VFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGL 385
VF+ +E KDL +WNTM++ Y+ + A+ ++ M ++PD TF SLL+
Sbjct: 345 VFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLA------- 397
Query: 386 TSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLN 445
TS ++Q AC++ G S K++ I +L++
Sbjct: 398 TSLDLDVLEMVQ-----------ACIIK-FGLSSKIE----------------ISNALIS 429
Query: 446 SCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMA--IRGIK 503
+ +G + A+ ER + N ++S Y + +EG++R ++ +R I
Sbjct: 430 AYSKNGQIEKADLLFER--SLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR-IL 486
Query: 504 KDA-----------GCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIP 552
DA S + + + H +V F+ + I NAL N G I
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLR-HGQFKETL----IGNALINMYSQCGTIQ 541
Query: 553 NTDVVLHDINEEMKVMW 569
N+ V + ++E+ V W
Sbjct: 542 NSLEVFNQMSEKDVVSW 558
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 216/392 (55%), Gaps = 5/392 (1%)
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL 222
VEP +A V L+ C + G+ IHAQ+ ++ + LL Y G
Sbjct: 106 VEPETYA--VLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAG 163
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL 282
+F + R+++ WN +I+G+ +G E L + M+ + + T +V C+ L
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQY-TFASVFRACSAL 222
Query: 283 TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTML 342
L GK H ++K K++ + +AL+DMY KC S +VFD + ++++ +W +++
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 343 AGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG-QKFFNLMQDYGV 401
+GY +G++ + + F++M RP+ +TF+ +L+ C+H GL +G + F+++ +DYG+
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGI 342
Query: 402 QPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAE 461
+P +HYA +VD LGR+G+L EA P K +WGSLL +CR+ GNV L E AA
Sbjct: 343 EPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAAT 402
Query: 462 RLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFV 521
+ E++P N GNYV+ +N YA G+ E +VR M G+KKD G S I+++ +H F+
Sbjct: 403 KFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFM 462
Query: 522 AGGSSDFRSSAEYLKIWNALSNAIKDSGYIPN 553
+S S Y K+ + +++ D Y P+
Sbjct: 463 KDDTSHRLSEKIYKKV-HEMTSFFMDIDYYPD 493
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 181/384 (47%), Gaps = 18/384 (4%)
Query: 26 HNHKPPPLNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKL 85
+ K L+ TLK LC +G+L+EA+ L+ S + E + LL C RK G+++
Sbjct: 72 NQRKTEKLDKTLKGLCVTGRLKEAVGLLWSSG-LQVEPETYAVLLQECKQRKEYTKGKRI 130
Query: 86 HQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEE--EDPPESVWVAMAIGYS 143
H + G + N LK KL+ LY++ G L A +F+ + + P W AM GY
Sbjct: 131 HAQMF-VVGFAL-NEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIP---WNAMISGYV 185
Query: 144 RNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQV 203
+ L +E L +Y DM + P + F+ +AC+ + G+ HA + KR +++ +
Sbjct: 186 QKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNII 245
Query: 204 VNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE 263
V++AL+ Y +C D RVF+ + RNV++W +LI+G+ GKV E L F M+ +E
Sbjct: 246 VDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMK-EE 304
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKE-IHGQIVKSGKKADRPLLNALMDMYAKCGSIGY 322
G + +T VL C + G E + G + + A++D + G +
Sbjct: 305 GCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQE 364
Query: 323 CKKVFDGMESKDLTS-WNTMLAGYSINGQI---EKAIDLFDEMIRSNIRPDGITFVSLLS 378
+ K+ W ++L I+G + E A F E+ +N G +V +
Sbjct: 365 AYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTN----GGNYVVFAN 420
Query: 379 GCSHSGLTSEGQKFFNLMQDYGVQ 402
G + GL K M++ GV+
Sbjct: 421 GYASCGLREAASKVRRKMENAGVK 444
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/521 (29%), Positives = 278/521 (53%), Gaps = 47/521 (9%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLL-HSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQ 124
I +L +C L G+++H ++L HS ++E+ ++ + LI+ Y+ G A F
Sbjct: 333 IISILPVCAQLTDLASGKEIHSYILRHS--YLLEDTSVGNALISFYARFGDTSAAYWAFS 390
Query: 125 DEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDV-GDS 183
S W A+ ++ + + L + +L ++ + LK C +V G
Sbjct: 391 LMSTKDIIS-WNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIG 449
Query: 184 RV----GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR-NVVSWNT 238
+V G ++ A L +EE + NALL Y +CG ++F + +R +VS+N+
Sbjct: 450 KVKEVHGYSVKAGLLHDEEEPK--LGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNS 507
Query: 239 LIAGFSGQG------------------------KVF-------ETLDAFRAMQLKEGMGF 267
L++G+ G +++ E + FR +Q + GM
Sbjct: 508 LLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQAR-GMRP 566
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF 327
+ +T+ +LP+CAQL +LH ++ HG I++ G D L L+D+YAKCGS+ + VF
Sbjct: 567 NTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVF 625
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
+DL + M+AGY+++G+ ++A+ ++ M SNI+PD + ++L+ C H+GL
Sbjct: 626 QSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQ 685
Query: 388 EGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
+G + ++ ++ +G++P++E YAC VD++ R G+LD+A + MP++ + +IWG+LL +
Sbjct: 686 DGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRA 745
Query: 447 CRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
C + L + A L + E ++ GN+V++SN+YA WEGV +R +M + +KK A
Sbjct: 746 CTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPA 805
Query: 507 GCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKD 547
GCSW+++ + + FV+G S R + + + NAL +K+
Sbjct: 806 GCSWLEVDGQRNVFVSGDCSHPRRDSIF-DLVNALYLQMKE 845
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/520 (23%), Positives = 235/520 (45%), Gaps = 40/520 (7%)
Query: 45 KLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKS 104
+ +A+ + P P+ + +L LC+ +G+ +H +++ K + ++ + +
Sbjct: 107 RFFKAMHFADEPKPSSVT---FAIVLPLCVRLGDSYNGKSMHSYII--KAGLEKDTLVGN 161
Query: 105 KLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVE 164
L+++Y+ G + D D W A+ G+S N + +A + ML E
Sbjct: 162 ALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTE 221
Query: 165 PGNFAFSVALKACTDVGDS---RVGRAIHAQLAKRDEEADQV-VNNALLRFYVECGCSGD 220
P + L C + + R GR IH+ + +R V V N+L+ FY+ G +
Sbjct: 222 PNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEE 281
Query: 221 VLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICA 280
+F M +++VSWN +IAG++ + F+ F + K + +T+ ++LP+CA
Sbjct: 282 AASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCA 341
Query: 281 QLTALHSGKEIHGQIVK-SGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWN 339
QLT L SGKEIH I++ S D + NAL+ YA+ G F M +KD+ SWN
Sbjct: 342 QLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWN 401
Query: 340 TMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDY 399
+L ++ + + + ++L ++ I D +T +SLL C + +G + Y
Sbjct: 402 AILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC----INVQGIGKVKEVHGY 457
Query: 400 GVQPSLEHYA-------CLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGN 452
V+ L H L+D + G ++ A + + + + + SLL+ G
Sbjct: 458 SVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSG- 516
Query: 453 VSLAETAAERLF-EIEPNNAGNYVMLSNIYADAGMW-EGVKRVREMMAIRGIKKD----- 505
+ A+ LF E+ + + ++ IYA++ E + RE+ A RG++ +
Sbjct: 517 ---SHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA-RGMRPNTVTIM 572
Query: 506 ------AGCSWIQIKQRIHTFVA-GGSSDFRSSAEYLKIW 538
A + + + ++ H ++ GG D R L ++
Sbjct: 573 NLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGTLLDVY 612
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 134/273 (49%), Gaps = 12/273 (4%)
Query: 170 FSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMP 229
F +KAC V D GRA+H + K A V+ ++L Y +C D ++F M
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 230 QRNVVSWNTLIAGFSGQ-GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSG 288
+ V WN ++ G S G+ ET+ F+AM + S +T VLP+C +L ++G
Sbjct: 84 SLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG 141
Query: 289 KEIHGQIVKSGKKADRPLLNALMDMYAKCGSI---GYCKKVFDGMESKDLTSWNTMLAGY 345
K +H I+K+G + D + NAL+ MYAK G I Y FDG+ KD+ SWN ++AG+
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY--TAFDGIADKDVVSWNAIIAGF 199
Query: 346 SINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS----HSGLTSEGQKFFNLMQDYGV 401
S N + A F M++ P+ T ++L C+ + S Q ++Q +
Sbjct: 200 SENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 402 QPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
Q + LV R G+++EA ++ M K
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK 292
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 259 MQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCG 318
+L G G V+ CA ++ L SG+ +HG + K G A + ++++MYAKC
Sbjct: 11 FRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCR 70
Query: 319 SIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIE-----KAIDLFDEMIRSNIRPDGITF 373
+ C+K+F M+S D WN +L G S++ E KA+ DE +P +TF
Sbjct: 71 RMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEP-----KPSSVTF 125
Query: 374 VSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLE 406
+L C G + G+ M Y ++ LE
Sbjct: 126 AIVLPLCVRLGDSYNGKS----MHSYIIKAGLE 154
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 151/514 (29%), Positives = 263/514 (51%), Gaps = 23/514 (4%)
Query: 26 HNHKPPPLNPTLKSLCKSGKLEEALR-----LIESPNPTPYQDEDISQLLHLCISRKSLE 80
+N N + K+ K+E+ L L+ +PT + S +L+ C S
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFT---YSIVLNGCSKLGSYS 317
Query: 81 HGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAI 140
G+ +H ++ S + + L + L+ +Y CG + EA VF +P W ++
Sbjct: 318 LGKLIHARIIVSDS--LADLPLDNALLDMYCSCGDMREAFYVF-GRIHNPNLVSWNSIIS 374
Query: 141 GYSRNRLSKEALLVYRDMLARSV-EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEE 199
G S N ++A+L+YR +L S P + FS A+ A + G+ +H Q+ K E
Sbjct: 375 GCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYE 434
Query: 200 ADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAM 259
V LL Y + + +VF+VM +R+VV W +I G S G + F M
Sbjct: 435 RSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM 494
Query: 260 QLKEGM--GFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
++ GFS L++V+ C+ + L G+ H +++G + AL+DMY K
Sbjct: 495 YREKNRSDGFS---LSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKN 551
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
G + +F + DL WN+ML YS +G +EKA+ F++++ + PD +T++SLL
Sbjct: 552 GKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLL 611
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALT-VARNMPMKLS 436
+ CSH G T +G+ +N M++ G++ +HY+C+V+++ ++G +DEAL + ++ P
Sbjct: 612 AACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQ 671
Query: 437 GSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREM 496
+W +LL++C N+ + AAE++ +++P + +++LSN+YA G WE V +R
Sbjct: 672 AELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRR- 730
Query: 497 MAIRGI--KKDAGCSWIQI-KQRIHTFVAGGSSD 527
IRG+ KD G SWI++ F +G S+
Sbjct: 731 -KIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSN 763
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 199/413 (48%), Gaps = 15/413 (3%)
Query: 56 PNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGR 115
PN + + + L+ +C + + G L+ ++ K +N +++ ++ +YS CG
Sbjct: 197 PNSSTF-----TSLVQVCAVLEDVLMGSSLNSQII--KLGYSDNVVVQTSVLGMYSSCGD 249
Query: 116 LDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALK 175
L+ ARR+F D + W M +G +N ++ L+ +R+ML V+P F +S+ L
Sbjct: 250 LESARRIF-DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLN 308
Query: 176 ACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVS 235
C+ +G +G+ IHA++ D AD ++NALL Y CG + VF + N+VS
Sbjct: 309 GCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVS 368
Query: 236 WNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI 295
WN++I+G S G + + +R + T + + A+ GK +HGQ+
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV 428
Query: 296 VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAI 355
K G + + L+ MY K +KVFD M+ +D+ W M+ G+S G E A+
Sbjct: 429 TKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAV 488
Query: 356 DLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDIL 415
F EM R R DG + S++ CS + +G+ F L G + LVD+
Sbjct: 489 QFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMY 548
Query: 416 GRSGKLDEALTV---ARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE 465
G++GK + A T+ A N +K W S+L + G V A + E++ E
Sbjct: 549 GKNGKYETAETIFSLASNPDLK----CWNSMLGAYSQHGMVEKALSFFEQILE 597
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 178/332 (53%), Gaps = 15/332 (4%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHS-KGRVIENPTLKSKLITLYSVCGRLDEARRVFQ 124
+ +L C+S L+ +++H +L + G E+P + LI++Y CG L++AR+VF
Sbjct: 97 VVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVF- 155
Query: 125 DEEEDPPESV--WVAMAIGYSRN-RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVG 181
++ P +V + A+ YSRN + A + M V+P + F+ ++ C +
Sbjct: 156 --DKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLE 213
Query: 182 DSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIA 241
D +G ++++Q+ K + VV ++L Y CG R+F+ + R+ V+WNT+I
Sbjct: 214 DVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIV 273
Query: 242 GFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKK 301
G K+ + L FR M L G+ + T + VL C++L + GK IH +I+ S
Sbjct: 274 GSLKNDKIEDGLMFFRNM-LMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSL 332
Query: 302 ADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM 361
AD PL NAL+DMY CG + VF + + +L SWN++++G S NG E+A+ ++ +
Sbjct: 333 ADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRL 392
Query: 362 IR-SNIRPDGITFVSLLSGCSHSGLTSEGQKF 392
+R S RPD TF + +S T+E ++F
Sbjct: 393 LRMSTPRPDEYTFSAAISA------TAEPERF 418
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 178/405 (43%), Gaps = 29/405 (7%)
Query: 98 ENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRD 157
E P + LI++Y C L++AR+VF ++ P ++ + +S + L +
Sbjct: 20 EYPYANNNLISMYVRCSSLEQARKVF---DKMPQRNIVTLFGLSAVFEYVSMGSSLHSQI 76
Query: 158 MLARSVE-----PGN-FAFSVA--LKACTDVGDSRVGRAIHAQLAKRDEEA---DQVVNN 206
+ S + P N A SV + C + + R IHA + A NN
Sbjct: 77 IKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANN 136
Query: 207 ALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMG 266
L+ YV CG +VF+ MP RNVVS+N L + +S A A L M
Sbjct: 137 NLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDF-----ASYAFPLTTHMA 191
Query: 267 FSWI-----TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
F ++ T T+++ +CA L + G ++ QI+K G + + +++ MY+ CG +
Sbjct: 192 FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLE 251
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
+++FD + ++D +WNTM+ G N +IE + F M+ S + P T+ +L+GCS
Sbjct: 252 SARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCS 311
Query: 382 HSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM--PMKLSGSI 439
G S G+ + L L+D+ G + EA V + P +S
Sbjct: 312 KLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVS--- 368
Query: 440 WGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADA 484
W S+++ C +G A RL + Y + I A A
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 247/488 (50%), Gaps = 42/488 (8%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
+S +L C ++ G ++H L K + + L++ LI LY CG L +R++F D
Sbjct: 124 LSLVLKACSRLGFVKGGMQIHGFL--KKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF-D 180
Query: 126 EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNF-AFSVALKACTDVGDSR 184
+ +M GY + L A ++ M +E N +++ + D
Sbjct: 181 RMPKRDSVSYNSMIDGYVKCGLIVSARELFDLM---PMEMKNLISWNSMISGYAQTSD-- 235
Query: 185 VGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFS 244
G I ++L E D + N+++ YV+ G D +F+VMP+R+VV+W T+I G++
Sbjct: 236 -GVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYA 294
Query: 245 GQGKV-------------------------------FETLDAFRAMQLKEGMGFSWITLT 273
G V E L+ F M+ + + TL
Sbjct: 295 KLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLV 354
Query: 274 TVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK 333
VLP AQL L ++H IV+ L AL+DMY+KCGSI + VF+G+E+K
Sbjct: 355 IVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK 414
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
+ WN M+ G +I+G E A D+ ++ R +++PD ITFV +L+ CSHSGL EG F
Sbjct: 415 SIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCF 474
Query: 394 NLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGN 452
LM + + ++P L+HY C+VDIL RSG ++ A + MP++ + IW + L +C
Sbjct: 475 ELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKE 534
Query: 453 VSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQ 512
E A+ L N +YV+LSN+YA GMW+ V+RVR MM R I+K GCSWI+
Sbjct: 535 FETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIE 594
Query: 513 IKQRIHTF 520
+ R+H F
Sbjct: 595 LDGRVHEF 602
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 212/448 (47%), Gaps = 62/448 (13%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGR---LDEARRV 122
IS +H+ S K+ + ++H L+ K +I+N L ++++ ++ R D AR V
Sbjct: 12 ISSTIHVLGSCKTSDDVNQIHGRLI--KTGIIKNSNLTTRIVLAFASSRRPYLADFARCV 69
Query: 123 FQD---------EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVA 173
F + E EDP +W A+ +S + ++ALL+ ML V F+ S+
Sbjct: 70 FHEYHVCSFSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLV 127
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNV 233
LKAC+ +G + G IH L K +D + N L+ Y++CGC G ++F+ MP+R+
Sbjct: 128 LKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDS 187
Query: 234 VSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT-------VLPICAQLTALH 286
VS+N++I G+ G + + F M ++ SW ++ + + I ++L A
Sbjct: 188 VSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM 247
Query: 287 SGKEI------------HGQIVKSG------KKADRPLLNALMDMYAKCGSIGYCKKVFD 328
K++ HG+I + + D ++D YAK G + + K +FD
Sbjct: 248 PEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFD 307
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR-SNIRPDGITFVSLLSGCSHSGLTS 387
M +D+ ++N+M+AGY N +A+++F +M + S++ PD T V +L + G S
Sbjct: 308 QMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLS 367
Query: 388 EG--------QKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSI 439
+ +K F L GV L+D+ + G + A+ V + K S
Sbjct: 368 KAIDMHLYIVEKQFYLGGKLGV--------ALIDMYSKCGSIQHAMLVFEGIENK-SIDH 418
Query: 440 WGSLLNSCRLDGNVSLAETAAERLFEIE 467
W +++ + G L E+A + L +IE
Sbjct: 419 WNAMIGGLAIHG---LGESAFDMLLQIE 443
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 222/417 (53%), Gaps = 8/417 (1%)
Query: 99 NPTLKSKLITLYSVCGRL-DEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSKEALLVY 155
N L SKL+ YS L + VF P ++ W + +SR+ + +++ ++
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHM---PYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 156 RDMLARS-VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVE 214
M S V P +F + L+AC+ +++ G IH K + V++AL+ YV+
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 215 CGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
G ++F+ MP R+ V + + G+ QG+ L FR M G + + +
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGY-SGFALDSVVMVS 240
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKD 334
+L C QL AL GK +HG ++ L NA+ DMY KC + Y VF M +D
Sbjct: 241 LLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRD 300
Query: 335 LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFN 394
+ SW++++ GY ++G + + LFDEM++ I P+ +TF+ +LS C+H GL + +F
Sbjct: 301 VISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFR 360
Query: 395 LMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVS 454
LMQ+Y + P L+HYA + D + R+G L+EA +MP+K ++ G++L+ C++ GNV
Sbjct: 361 LMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVE 420
Query: 455 LAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWI 511
+ E A L +++P A YV L+ +Y+ AG ++ + +R+ M + I K GCS I
Sbjct: 421 VGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 200/354 (56%), Gaps = 11/354 (3%)
Query: 163 VEPGNFAFSVALKAC-TDVGDSRVGRAIHAQLAKRDEEA--DQVVNNALLRFYVECGCSG 219
V P F + KA D R GRA+HA + K E D+ V AL+ FY CG
Sbjct: 108 VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLR 167
Query: 220 DVLRVFEVMPQRNVVSWNTLIAGFSGQGKV---FETLDAFRAMQLKEGMGFSWITLTTVL 276
+ +FE + + ++ +WNTL+A ++ ++ E L F MQ++ ++L ++
Sbjct: 168 EARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNE----LSLVALI 223
Query: 277 PICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT 336
CA L G H ++K+ ++ + +L+D+Y+KCG + + +KVFD M +D++
Sbjct: 224 KSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVS 283
Query: 337 SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM 396
+N M+ G +++G ++ I+L+ +I + PD TFV +S CSHSGL EG + FN M
Sbjct: 284 CYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSM 343
Query: 397 QD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSL 455
+ YG++P +EHY CLVD+LGRSG+L+EA + MP+K + ++W S L S + G+
Sbjct: 344 KAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFER 403
Query: 456 AETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCS 509
E A + L +E N+GNYV+LSNIYA W V++ RE+M + K G S
Sbjct: 404 GEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 10/279 (3%)
Query: 81 HGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAI 140
HG+ LH H+L V + +++ L+ Y+ CG+L EAR +F+ E P + W +
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE-PDLATWNTLLA 189
Query: 141 GYSRNR---LSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD 197
Y+ + +E LL++ M V P + +K+C ++G+ G H + K +
Sbjct: 190 AYANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNN 246
Query: 198 EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFR 257
+Q V +L+ Y +CGC +VF+ M QR+V +N +I G + G E ++ ++
Sbjct: 247 LTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYK 306
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI-VKSGKKADRPLLNALMDMYAK 316
++ + +G+ T + C+ + G +I + G + L+D+ +
Sbjct: 307 SL-ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGR 365
Query: 317 CGSIGYCKKVFDGMESK-DLTSWNTMLAGYSINGQIEKA 354
G + ++ M K + T W + L +G E+
Sbjct: 366 SGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERG 404
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 242/458 (52%), Gaps = 44/458 (9%)
Query: 102 LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
+++ LI YS GR+ EAR+VF DE + + W M Y R DM
Sbjct: 906 IQTTLIDFYSATGRIREARKVF-DEMPERDDIAWTTMVSAYRR----------VLDM--- 951
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV 221
D +S LA + E ++ +N L+ Y+ G
Sbjct: 952 -----------------DSANS---------LANQMSEKNEATSNCLINGYMGLGNLEQA 985
Query: 222 LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQ 281
+F MP ++++SW T+I G+S + E + F M ++EG+ +T++TV+ CA
Sbjct: 986 ESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM-MEEGIIPDEVTMSTVISACAH 1044
Query: 282 LTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTM 341
L L GKE+H +++G D + +AL+DMY+KCGS+ VF + K+L WN++
Sbjct: 1045 LGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSI 1104
Query: 342 LAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF-NLMQDYG 400
+ G + +G ++A+ +F +M +++P+ +TFVS+ + C+H+GL EG++ + +++ DY
Sbjct: 1105 IEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYS 1164
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAA 460
+ ++EHY +V + ++G + EAL + NM + + IWG+LL+ CR+ N+ +AE A
Sbjct: 1165 IVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAF 1224
Query: 461 ERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD-AGCSWIQIKQRIHT 519
+L +EP N+G Y +L ++YA+ W V +R M GI+K G S I+I +R H
Sbjct: 1225 NKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHL 1284
Query: 520 FVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVV 557
F A S +S E + + + + + +GY+ T+ V
Sbjct: 1285 FAAADKS-HSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 131/302 (43%), Gaps = 40/302 (13%)
Query: 98 ENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSKEALLVY 155
+N + LI Y G L++A +F + P + + W M GYS+N+ +EA+ V+
Sbjct: 964 KNEATSNCLINGYMGLGNLEQAESLFN---QMPVKDIISWTTMIKGYSQNKRYREAIAVF 1020
Query: 156 RDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVEC 215
M+ + P S + AC +G +G+ +H + D + +AL+ Y +C
Sbjct: 1021 YKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKC 1080
Query: 216 GCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTV 275
G L VF +P++N+ WN++I G + G E L F M++ E + + +T +V
Sbjct: 1081 GSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEM-ESVKPNAVTFVSV 1139
Query: 276 LPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDL 335
C H +V G++ R +++D Y+ ++ +
Sbjct: 1140 FTACT-----------HAGLVDEGRRIYR----SMIDDYSIVSNVEH------------- 1171
Query: 336 TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS-HSGLTSEGQKFFN 394
+ M+ +S G I +A++L M P+ + + +LL GC H L F
Sbjct: 1172 --YGGMVHLFSKAGLIYEALELIGNM---EFEPNAVIWGALLDGCRIHKNLVIAEIAFNK 1226
Query: 395 LM 396
LM
Sbjct: 1227 LM 1228
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 129/334 (38%), Gaps = 69/334 (20%)
Query: 228 MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHS 287
M + NV +N L GF +L+ + M L++ + S T +++ + A A
Sbjct: 831 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRM-LRDSVSPSSYTYSSL--VKASSFASRF 887
Query: 288 GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYS- 346
G+ + I K G + L+D Y+ G I +KVFD M +D +W TM++ Y
Sbjct: 888 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 947
Query: 347 -------------------------IN-----GQIEKAIDLFDE---------------- 360
IN G +E+A LF++
Sbjct: 948 VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY 1007
Query: 361 ---------------MIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSL 405
M+ I PD +T +++S C+H G+ G++ G +
Sbjct: 1008 SQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDV 1067
Query: 406 EHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG--NVSLAETAAERL 463
+ LVD+ + G L+ AL V N+P K + W S++ G +L A +
Sbjct: 1068 YIGSALVDMYSKCGSLERALLVFFNLPKK-NLFCWNSIIEGLAAHGFAQEALKMFAKMEM 1126
Query: 464 FEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMM 497
++P NA +V + AG+ + +R+ M
Sbjct: 1127 ESVKP-NAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 237/469 (50%), Gaps = 33/469 (7%)
Query: 99 NPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDM 158
+ ++ +I Y G +D+A VF E W + GY++N +EAL + M
Sbjct: 192 DSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM 251
Query: 159 LARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECG-- 216
++ +F L + + ++G+ +HA++ K +++ V++ ++ Y +CG
Sbjct: 252 EENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNM 311
Query: 217 --------------------------CSGDVL---RVFEVMPQRNVVSWNTLIAGFSGQG 247
G ++ R+F+ + ++N+V W + G+
Sbjct: 312 KYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLR 371
Query: 248 KVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL 307
+ L+ RA E + + +VL C+ + GKEIHG +++G D+ L+
Sbjct: 372 QPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV 431
Query: 308 NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIR 367
A +DMY+KCG++ Y +++FD +D +N M+AG + +G K+ F++M +
Sbjct: 432 TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFK 491
Query: 368 PDGITFVSLLSGCSHSGLTSEGQKFF-NLMQDYGVQPSLEHYACLVDILGRSGKLDEALT 426
PD ITF++LLS C H GL EG+K+F ++++ Y + P HY C++D+ G++ +LD+A+
Sbjct: 492 PDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIE 551
Query: 427 VARNM-PMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAG 485
+ + ++ I G+ LN+C + N L + E+L IE +N Y+ ++N YA +G
Sbjct: 552 LMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSG 611
Query: 486 MWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEY 534
W+ ++R+R M + ++ +GCSW I ++ H F + S + + A Y
Sbjct: 612 RWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIY 660
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 143/268 (53%), Gaps = 22/268 (8%)
Query: 206 NALLRFYVECGCSGDVLRVFEVMP-QRNVVSWNTLIAGFS-GQGKVFETLDAFRAMQLKE 263
NA++ YV+ + +FE +R+++++NTL++GF+ G E ++ F M KE
Sbjct: 58 NAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKE 117
Query: 264 GMGFSWI---TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI 320
WI T+TT++ + A+LT + G+++HG +VK+G + +++L+ MY+KCG
Sbjct: 118 KDDI-WIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKF 176
Query: 321 GYCKKVFDG--MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLS 378
+F+G +E D + N M+A Y G I+KA+ +F R+ D I++ +L++
Sbjct: 177 KEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVF---WRNPELNDTISWNTLIA 233
Query: 379 GCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKL--S 436
G + +G E K M++ G++ + ++++L ++L + + + ++ +
Sbjct: 234 GYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSL----KSLKIGKEVHARVLKN 289
Query: 437 GSIWGSLLNSCRLD-----GNVSLAETA 459
GS ++S +D GN+ AE+A
Sbjct: 290 GSYSNKFVSSGIVDVYCKCGNMKYAESA 317
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQI 351
H + +KSG N L+++Y+K G + + VFD M +++ SWN ++A Y +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 352 EKAIDLFDEMIRSNIRPDGITFVSLLSGCSHS-GLTSEGQKFFNLMQ 397
++A +LF+ N D IT+ +LLSG + + G SE + F M
Sbjct: 71 KEARELFES---DNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMH 114
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 223/426 (52%), Gaps = 11/426 (2%)
Query: 102 LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSR-NRLSKEALLVYRDMLA 160
+ + ++ +Y+ G++ AR F DE E W A+ GY R L + L +
Sbjct: 115 VSTGVVDMYAKFGKMGCARNAF-DEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV 173
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
+ V ++ + GD R + ++ + + ++ Y
Sbjct: 174 KDV----VIYNAMMDGFVKSGDMTSARRLFDEMTHKT----VITWTTMIHGYCNIKDIDA 225
Query: 221 VLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICA 280
++F+ MP+RN+VSWNT+I G+ + E + F+ MQ + +T+ +VLP +
Sbjct: 226 ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 281 QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNT 340
AL G+ H + + + A++DMY+KCG I K++FD M K + SWN
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNA 345
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
M+ GY++NG A+DLF M+ +PD IT +++++ C+H GL EG+K+F++M++ G
Sbjct: 346 MIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMG 404
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAA 460
+ +EHY C+VD+LGR+G L EA + NMP + +G I S L++C ++ AE
Sbjct: 405 LNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERIL 464
Query: 461 ERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTF 520
++ E+EP N GNYV+L N+YA W+ V+ +M KK+ GCS I+I + F
Sbjct: 465 KKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEF 524
Query: 521 VAGGSS 526
++G ++
Sbjct: 525 ISGDTT 530
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 167/369 (45%), Gaps = 29/369 (7%)
Query: 99 NPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDM 158
N + +K + + + + AR++F + + +M Y R ++ +YRD+
Sbjct: 9 NVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDL 68
Query: 159 LARS-VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGC 217
+ P NF F+ K+C+ G +H+Q+ + AD V+ ++ Y + G
Sbjct: 69 RKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGK 128
Query: 218 SGDVLRVFEVMPQRNVVSWNTLIAGFSGQG------KVFETLDAFRAMQLKEGMGFSWIT 271
G F+ MP R+ VSW LI+G+ G K+F+ + + + + M ++
Sbjct: 129 MGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVK 188
Query: 272 ---LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFD 328
+T+ + ++T H ++ ++ Y I +K+FD
Sbjct: 189 SGDMTSARRLFDEMT--------HKTVIT---------WTTMIHGYCNIKDIDAARKLFD 231
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM-IRSNIRPDGITFVSLLSGCSHSGLTS 387
M ++L SWNTM+ GY N Q ++ I LF EM +++ PD +T +S+L S +G S
Sbjct: 232 AMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALS 291
Query: 388 EGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
G+ +Q + ++ ++D+ + G++++A + MP K S W ++++
Sbjct: 292 LGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS-WNAMIHGY 350
Query: 448 RLDGNVSLA 456
L+GN A
Sbjct: 351 ALNGNARAA 359
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 237/438 (54%), Gaps = 44/438 (10%)
Query: 80 EHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMA 139
E G+ +H +L K + + S LI +YS G + AR+VF D E V+ AM
Sbjct: 134 EFGKMIHCLVL--KFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDL-VVFNAMI 190
Query: 140 IGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEE 199
GY+ N + EAL + +DM ++P
Sbjct: 191 SGYANNSQADEALNLVKDMKLLGIKP---------------------------------- 216
Query: 200 ADQVVNNALLRFYVECGCSGDVLRVFEVM----PQRNVVSWNTLIAGFSGQGKVFETLDA 255
D + NAL+ + V + E+M + +VVSW ++I+G + + DA
Sbjct: 217 -DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDA 275
Query: 256 FRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYA 315
F+ M L G+ + T+ T+LP C L + GKEIHG V +G + + +AL+DMY
Sbjct: 276 FKQM-LTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYG 334
Query: 316 KCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVS 375
KCG I +F K ++N+M+ Y+ +G +KA++LFD+M + + D +TF +
Sbjct: 335 KCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTA 394
Query: 376 LLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
+L+ CSH+GLT GQ F LMQ+ Y + P LEHYAC+VD+LGR+GKL EA + + M M+
Sbjct: 395 ILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRME 454
Query: 435 LSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVR 494
+WG+LL +CR GN+ LA AA+ L E+EP N+GN ++L+++YA+AG WE V R++
Sbjct: 455 PDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMK 514
Query: 495 EMMAIRGIKKDAGCSWIQ 512
+M+ + ++ G SW++
Sbjct: 515 KMIKKKRFRRFLGSSWVE 532
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 129/246 (52%), Gaps = 1/246 (0%)
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
GR +HA L + L+ FYVECG D +VF+ MP+R++ +I +
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
G E+LD FR M K+G+ + ++L L GK IH ++K ++D
Sbjct: 95 NGYYQESLDFFREMY-KDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
++++L+DMY+K G +G +KVF + +DL +N M++GY+ N Q ++A++L +M
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 366 IRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEAL 425
I+PD IT+ +L+SG SH + + LM G +P + + ++ L + + ++A
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 426 TVARNM 431
+ M
Sbjct: 274 DAFKQM 279
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 178/392 (45%), Gaps = 47/392 (11%)
Query: 82 GQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIG 141
G+ LH HL+ S + + +KL+T Y CG++ +AR+VF DE S V M
Sbjct: 35 GRVLHAHLVTSG--IARLTRIAAKLVTFYVECGKVLDARKVF-DEMPKRDISGCVVMIGA 91
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
+RN +E+L +R+M ++ F LKA ++ D G+ IH + K E+D
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESD 151
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
+ ++L+ Y + G G+ +VF + ++++V +N +I+G++ + E L+ + M+
Sbjct: 152 AFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMK- 210
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
L + P AL SG H +++ +K L +D Y
Sbjct: 211 ----------LLGIKPDVITWNALISGFS-H---MRNEEKVSEILELMCLDGY------- 249
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
D+ SW ++++G N Q EKA D F +M+ + P+ T ++LL C+
Sbjct: 250 ----------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 382 HSGLTSEGQKFFNLMQDYGVQPSLEHY----ACLVDILGRSGKLDEALTVARNMPMKLSG 437
G++ + Y V LE + + L+D+ G+ G + EA+ + R P K +
Sbjct: 300 TLAYMKHGKE----IHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTV 355
Query: 438 SIWGSLLNSCRLDGNVSLAETAAERLFEIEPN 469
+ + C N LA+ A E ++E
Sbjct: 356 TFNSMIF--CY--ANHGLADKAVELFDQMEAT 383
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 239/473 (50%), Gaps = 49/473 (10%)
Query: 79 LEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WV 136
+E G +LH L K + + L+++YS CG A R+F E+ P +SV +
Sbjct: 145 IEGGMQLH--CLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMF---EKVPHKSVVTYN 199
Query: 137 AMAIGYSRNRLSKEALLVYRDMLA-RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAK 195
A G N + V+ M S EP + F A+ AC + + + GR +H + K
Sbjct: 200 AFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 196 RDEEADQVVNNALLRFYVECGCSGDVLRVF-EVMPQRNVVSWNT---------------- 238
++ + + +V AL+ Y +C C VF E+ RN++SWN+
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVE 319
Query: 239 -------------------LIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPIC 279
LI+GFS GKV E F M L M S LT++L C
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM-LSVVMVPSLKCLTSLLSAC 378
Query: 280 AQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK--DLTS 337
+ + L +GKEIHG ++K+ + D +L +L+DMY KCG + +++FD E K D
Sbjct: 379 SDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVF 438
Query: 338 WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ 397
WN M++GY +G+ E AI++F+ + + P TF ++LS CSH G +G + F LMQ
Sbjct: 439 WNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQ 498
Query: 398 -DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
+YG +PS EH C++D+LGRSG+L EA V M S SLL SCR + L
Sbjct: 499 EEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLG 557
Query: 457 ETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCS 509
E AA +L E+EP N +V+LS+IYA WE V+ +R+++ + + K G S
Sbjct: 558 EEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 180/370 (48%), Gaps = 17/370 (4%)
Query: 49 ALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLIT 108
+L +I S +P + LL C + G+ LH ++ + G ++ T + L++
Sbjct: 20 SLDVILSHSPNKFT---FPPLLKSCAKLGDVVQGRILHAQVVKT-GFFVDVFT-ATALVS 74
Query: 109 LYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNF 168
+Y ++ +A +V + E SV A++ G N ++A ++ D AR G
Sbjct: 75 MYMKVKQVTDALKVLDEMPERGIASVNAAVS-GLLENGFCRDAFRMFGD--ARVSGSGMN 131
Query: 169 AFSVA--LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFE 226
+ +VA L C GD G +H K E + V +L+ Y CG R+FE
Sbjct: 132 SVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFE 188
Query: 227 VMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALH 286
+P ++VV++N I+G G + F M+ + +T + CA L L
Sbjct: 189 KVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQ 248
Query: 287 SGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM-ESKDLTSWNTMLAGY 345
G+++HG ++K + + + AL+DMY+KC VF + ++++L SWN++++G
Sbjct: 249 YGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGM 308
Query: 346 SINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSL 405
INGQ E A++LF+++ ++PD T+ SL+SG S G E KFF M + PSL
Sbjct: 309 MINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSL 368
Query: 406 EHYACLVDIL 415
+ CL +L
Sbjct: 369 K---CLTSLL 375
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 156/342 (45%), Gaps = 15/342 (4%)
Query: 165 PGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRV 224
P F F LK+C +GD GR +HAQ+ K D AL+ Y++ D L+V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 225 FEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTA 284
+ MP+R + S N ++G G + F ++ G G + +T+ +VL C
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVS-GSGMNSVTVASVLGGCGD--- 144
Query: 285 LHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAG 344
+ G ++H +KSG + + + +L+ MY++CG ++F+ + K + ++N ++G
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 345 YSINGQIEKAIDLFDEMIR-SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQP 403
NG + +F+ M + S+ P+ +TFV+ ++ C+ G++ L+ Q
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 404 SLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERL 463
L+D+ + A V + + W S+++ ++G ETA E L
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ---HETAVE-L 320
Query: 464 FE------IEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAI 499
FE ++P++A ++S + E K M+++
Sbjct: 321 FEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Query: 34 NPTLKSLCKSGKLEEALRLIE---SPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLL 90
N + + GK+ EA + E S P + ++ LL C +L++G+++H H++
Sbjct: 337 NSLISGFSQLGKVIEAFKFFERMLSVVMVP-SLKCLTSLLSACSDIWTLKNGKEIHGHVI 395
Query: 91 HSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV-WVAMAIGYSRNRLSK 149
+ + + + LI +Y CG ARR+F E P + V W M GY ++ +
Sbjct: 396 KAAAE--RDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECE 453
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAI 189
A+ ++ + VEP F+ L AC+ G+ G I
Sbjct: 454 SAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQI 493
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 162/534 (30%), Positives = 265/534 (49%), Gaps = 55/534 (10%)
Query: 34 NPTLKSLCKSGKLEEALRLI-ESPNPTPYQDEDISQLLHLCISR-KSLEHGQKLHQHLLH 91
N LKSL + L L E Y D ++ I R + + G+K+H + +
Sbjct: 15 NKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV- 73
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSK 149
K + + + + L+ +Y+ G+++ +VF +E P V W + Y N +
Sbjct: 74 -KAGLEFDSYVSNSLMGMYASLGKIEITHKVF---DEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 150 EALLVYRDMLARSVEPGNFAFS-----VALKACTDVGDSRVGRAIHAQLAKRDEEADQVV 204
+A+ V++ M S N F L AC+ + + +G I+ + + E +
Sbjct: 130 DAIGVFKRMSQES----NLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRI 184
Query: 205 NNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFET------------ 252
NAL+ + +CGC VF+ M +NV W +++ G+ G++ E
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 253 -------------------LDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHG 293
L+ FR MQ G+ L ++L CAQ AL GK IHG
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQ-TAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 294 QIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEK 353
I ++ D+ + AL+DMYAKCG I +VF ++ +D SW +++ G ++NG +
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 354 AIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLV 412
A+DL+ EM +R D ITFV++L+ C+H G +EG+K F+ M + + VQP EH +CL+
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 413 DILGRSGKLDEALTVARNMPMKLSGS---IWGSLLNSCRLDGNVSLAETAAERLFEIEPN 469
D+L R+G LDEA + M + + ++ SLL++ R GNV +AE AE+L ++E +
Sbjct: 424 DLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVS 483
Query: 470 NAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAG 523
++ + +L+++YA A WE V VR M GI+K GCS I+I H F+ G
Sbjct: 484 DSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVG 537
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 225/425 (52%), Gaps = 2/425 (0%)
Query: 88 HLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRL 147
H L K ++ + ++ + L+ YS CG L A R++ ++D + ++ Y+
Sbjct: 269 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGL-TSIVSCYAEKGD 327
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNA 207
A++ + ++ A L C +G ++H K +V N
Sbjct: 328 MDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNG 387
Query: 208 LLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
L+ Y + VL +FE + + ++SWN++I+G G+ + F M L G+
Sbjct: 388 LITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLP 447
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF 327
IT+ ++L C+QL L+ GKE+HG +++ + + + AL+DMYAKCG+ + VF
Sbjct: 448 DAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVF 507
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
+++ +WN+M++GYS++G +A+ + EM ++PD ITF+ +LS C+H G
Sbjct: 508 KSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVD 567
Query: 388 EGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
EG+ F M +++G+ P+L+HYA +V +LGR+ EAL + M +K ++WG+LL++
Sbjct: 568 EGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSA 627
Query: 447 CRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
C + + + E A ++F ++ N G YV++SN+YA MW+ V RVR MM G
Sbjct: 628 CIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYL 687
Query: 507 GCSWI 511
G S I
Sbjct: 688 GVSQI 692
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 3/236 (1%)
Query: 146 RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRA--IHAQLAKRDEEADQV 203
+S + ++RD+L S+ P +F S+ L+A T +S + + L K +
Sbjct: 27 EISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVY 86
Query: 204 VNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE 263
V +LL Y++ GC +F+ MP+R+ V WN LI G+S G + F M L++
Sbjct: 87 VKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVM-LQQ 145
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYC 323
G S TL +LP C Q + G+ +HG KSG + D + NAL+ Y+KC +G
Sbjct: 146 GFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSA 205
Query: 324 KKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG 379
+ +F M+ K SWNTM+ YS +G E+AI +F M N+ +T ++LLS
Sbjct: 206 EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 162/358 (45%), Gaps = 15/358 (4%)
Query: 102 LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
+K+ L+ LY G + A+ +F DE + VW A+ GYSRN +A ++ ML +
Sbjct: 87 VKTSLLNLYLKKGCVTSAQMLF-DEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ 145
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV 221
P L C G GR++H AK E D V NAL+ FY +C G
Sbjct: 146 GFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSA 205
Query: 222 LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQ 281
+F M ++ VSWNT+I +S G E + F+ M ++ + S +T+ +
Sbjct: 206 EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM-FEKNVEISPVTIINL------ 258
Query: 282 LTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTM 341
L+A S + +H +VK G D ++ +L+ Y++CG + ++++ + + ++
Sbjct: 259 LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSI 318
Query: 342 LAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGV 401
++ Y+ G ++ A+ F + + ++ D + V +L GC S G + Y +
Sbjct: 319 VSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS----LHGYAI 374
Query: 402 QPSLEHYACLVD-ILGRSGKLDEALTVARNMPMKLSGSI--WGSLLNSCRLDGNVSLA 456
+ L +V+ ++ K D+ TV + W S+++ C G S A
Sbjct: 375 KSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTA 432
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Query: 289 KEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSIN 348
+++ + KSG + +L+++Y K G + + +FD M +D WN ++ GYS N
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHY 408
G A LF M++ P T V+LL C G S+G+ + G++ +
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 409 ACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE 465
L+ + +L A + R M K + S W +++ + G A T + +FE
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVS-WNTMIGAYSQSGLQEEAITVFKNMFE 245
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 253/483 (52%), Gaps = 35/483 (7%)
Query: 42 KSGKLEEALRLIE-------SPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKG 94
++G+ +EA+ L PN ++ +L C + G+ +H + + K
Sbjct: 378 QAGQHDEAISLFRDMMRIHIKPNAVT-----LTSVLQGCAGVAASRLGKSIHCYAI--KA 430
Query: 95 RVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSKEAL 152
+ + +I++Y+ CGR A + F E P + + A+A GY++ + +A
Sbjct: 431 DIESELETATAVISMYAKCGRFSPALKAF---ERLPIKDAVAFNALAQGYTQIGDANKAF 487
Query: 153 LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFY 212
VY++M V P + L+ C D G ++ Q+ K +++ V +AL+ +
Sbjct: 488 DVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMF 547
Query: 213 VECGCSGDVLRVFEVMP-QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
+C + +F+ +++ VSWN ++ G+ G+ E + FR M++ E + +T
Sbjct: 548 TKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKV-EKFQPNAVT 606
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME 331
++ A+L+AL G +H +++ G + P+ N+L+DMYAKCG I +K F +
Sbjct: 607 FVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS 666
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
+K + SWNTML+ Y+ +G A+ LF M + ++PD ++F+S+LS C H+GL EG++
Sbjct: 667 NKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKR 726
Query: 392 FFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD 450
F M + + ++ +EHYAC+VD+LG++G EA+ + R M +K S +WG+LLNS R+
Sbjct: 727 IFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
Query: 451 GNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSW 510
N+ L+ A +L ++EP N +Y +R+ E+ + IKK CSW
Sbjct: 787 CNLWLSNAALCQLVKLEPLNPSHY-------------SQDRRLGEVNNVSRIKKVPACSW 833
Query: 511 IQI 513
I++
Sbjct: 834 IEV 836
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 154/303 (50%), Gaps = 9/303 (2%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDML-ARS 162
++LI YS+ R D +R +F D DP +W +M GY+R L +EAL + M +
Sbjct: 37 NQLINAYSLFQRQDLSRVIF-DSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKG 95
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL 222
++P ++F+ ALKAC D + G IH +A+ E+D + AL+ Y +
Sbjct: 96 IDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSAR 155
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL 282
+VF+ M ++VV+WNT+++G + G L F M+ + ++L ++P ++L
Sbjct: 156 QVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMR-SCCVDIDHVSLYNLIPAVSKL 214
Query: 283 TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTML 342
+ +HG ++K G + L+DMY C + + VF+ + KD +SW TM+
Sbjct: 215 EKSDVCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMM 272
Query: 343 AGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQ 402
A Y+ NG E+ ++LFD M ++R + + S L ++ G +G + DY VQ
Sbjct: 273 AAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIA----IHDYAVQ 328
Query: 403 PSL 405
L
Sbjct: 329 QGL 331
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 184/404 (45%), Gaps = 9/404 (2%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDED---ISQLLHLCISRKSLEHGQKLHQHLL 90
N ++ ++G EAL + D D + L C + G ++H L
Sbjct: 68 NSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHD--L 125
Query: 91 HSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKE 150
++ + + + + L+ +Y L AR+VF D+ W M G ++N S
Sbjct: 126 IAEMGLESDVYIGTALVEMYCKARDLVSARQVF-DKMHVKDVVTWNTMVSGLAQNGCSSA 184
Query: 151 ALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLR 210
ALL++ DM + V+ + + + A + + S V R +H + K+ ++ L+
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG--FIFAFSSGLID 242
Query: 211 FYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWI 270
Y C VFE + +++ SW T++A ++ G E L+ F M+ + + +
Sbjct: 243 MYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR-NYDVRMNKV 301
Query: 271 TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM 330
+ L A + L G IH V+ G D + +LM MY+KCG + +++F +
Sbjct: 302 AAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINI 361
Query: 331 ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQ 390
E +D+ SW+ M+A Y GQ ++AI LF +M+R +I+P+ +T S+L GC+ + G+
Sbjct: 362 EDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGK 421
Query: 391 KFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
++ LE ++ + + G+ AL +P+K
Sbjct: 422 SIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 167/371 (45%), Gaps = 4/371 (1%)
Query: 101 TLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
S LI +Y C L A VF+ E ES W M Y+ N +E L ++ M
Sbjct: 235 AFSSGLIDMYCNCADLYAAESVFE-EVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRN 293
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
V A + AL+A VGD G AIH ++ D V +L+ Y +CG
Sbjct: 294 YDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEI 353
Query: 221 VLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICA 280
++F + R+VVSW+ +IA + G+ E + FR M ++ + + +TLT+VL CA
Sbjct: 354 AEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDM-MRIHIKPNAVTLTSVLQGCA 412
Query: 281 QLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNT 340
+ A GK IH +K+ +++ A++ MYAKCG K F+ + KD ++N
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNA 472
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
+ GY+ G KA D++ M + PD T V +L C+ + G + + +G
Sbjct: 473 LAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHG 532
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNV--SLAET 458
L+++ + L A+ + + S W ++N L G ++A
Sbjct: 533 FDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATF 592
Query: 459 AAERLFEIEPN 469
++ + +PN
Sbjct: 593 RQMKVEKFQPN 603
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 9/193 (4%)
Query: 265 MGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
M ++ L +L C L ++HG ++ SG K L+NA Y+ +
Sbjct: 1 MPINYTNLLLMLRECKNFRCL---LQVHGSLIVSGLKPHNQLINA----YSLFQRQDLSR 53
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN-IRPDGITFVSLLSGCSHS 383
+FD + + WN+M+ GY+ G +A+ F M I PD +F L C+ S
Sbjct: 54 VIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGS 113
Query: 384 GLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSL 443
+G + +L+ + G++ + LV++ ++ L A V M +K W ++
Sbjct: 114 MDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVK-DVVTWNTM 172
Query: 444 LNSCRLDGNVSLA 456
++ +G S A
Sbjct: 173 VSGLAQNGCSSAA 185
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 235/445 (52%), Gaps = 47/445 (10%)
Query: 119 ARRVFQDEEEDPPESVWVAMAI--GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKA 176
A +VF +E P V A A+ + + EA ++ +L + P F F + +
Sbjct: 46 AHKVF---DEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 177 CTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR------------- 223
T D ++G+ +H K ++ V +A+L YV+ D R
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 224 ------------------VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
+F MP+R+VV+WN +I GFS G+ E ++ F M L+EG+
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM-LREGV 221
Query: 266 GF-SWITLTTVLPICAQLTALHSGKEIHGQIVKS-GKKADRPLLNALMDMYAKCGSIGYC 323
+ T + + + + +GK IH +K GK+ + + N+L+ Y+KCG++
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 324 KKVFDGME--SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR-SNIRPDGITFVSLLSGC 380
F+ +E +++ SWN+M+ GY+ NG+ E+A+ +F++M++ +N+RP+ +T + +L C
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 381 SHSGLTSEGQKFFN-LMQDYGVQPSL---EHYACLVDILGRSGKLDEALTVARNMPMKLS 436
+H+GL EG +FN + DY P+L EHYAC+VD+L RSG+ EA + ++MP+
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 437 GSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREM 496
W +LL C++ N LA+ AA ++ E++P + +YVMLSN Y+ W+ V +R
Sbjct: 401 IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 497 MAIRGIKKDAGCSWIQIKQRIHTFV 521
M G+K+ GCSWI+++ +I FV
Sbjct: 461 MKETGLKRFTGCSWIEVRDQIRVFV 485
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 218/387 (56%), Gaps = 18/387 (4%)
Query: 150 EALLVYRDMLARS---VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNN 206
+ALL +R +S V+ + F++ + + S GR IHA + K A +
Sbjct: 46 KALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQK-ASSLDGRQIHALVRKLGFNAVIQIQT 104
Query: 207 ALLRFYVECGCSGDVLRVFEVMPQR-NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
+L+ FY G +VF+ P++ N+V W +I+ ++ E ++ F+ M+ E +
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRME-AEKI 163
Query: 266 GFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKK--ADRPLLNALMDMYAKCGSIGYC 323
+ +T L CA L A+ G+EI+ + +K ++ D L N+L++MY K G
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 324 KKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN------IRPDGITFVSLL 377
+K+FD KD+T++ +M+ GY++NGQ +++++LF +M + I P+ +TF+ +L
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 378 SGCSHSGLTSEGQKFF-NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLS 436
CSHSGL EG++ F +++ DY ++P H+ C+VD+ RSG L +A MP+K +
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 437 GSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREM 496
IW +LL +C L GNV L E R+FE++ ++ G+YV LSNIYA GMW+ ++R+
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 497 MAIRGIKKDAGCSWIQIKQRIHTFVAG 523
+ R + G SWI++ I+ FV+G
Sbjct: 404 VRKRRM---PGKSWIELGSIINEFVSG 427
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 165/347 (47%), Gaps = 27/347 (7%)
Query: 25 HHNHKPPPLNPTLKSLCKSGKLEEAL-----RLIESPNPTPYQDEDISQLLHLCIS---R 76
H + K N TLK +SG+ +AL R +SP+ + S L + +S +
Sbjct: 23 HFHTKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFV----DSFSVLFAIKVSSAQK 78
Query: 77 KSLEHGQKLHQHLLHSKG--RVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV 134
S G+++H L+ G VI+ +++ L+ YS G +D AR+VF + E +
Sbjct: 79 ASSLDGRQIHA-LVRKLGFNAVIQ---IQTSLVGFYSSVGDVDYARQVFDETPEKQNIVL 134
Query: 135 WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLA 194
W AM Y+ N S EA+ +++ M A +E +VAL AC D+G ++G I+++
Sbjct: 135 WTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSI 194
Query: 195 KRDEE--ADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFET 252
KR D + N+LL YV+ G + ++F+ +++V ++ ++I G++ G+ E+
Sbjct: 195 KRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQES 254
Query: 253 LDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSG------KEIHGQIVKSGKKADRPL 306
L+ F+ M+ + + IT V I + HSG + I+ K
Sbjct: 255 LELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAH 314
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMESK-DLTSWNTMLAGYSINGQIE 352
++D++ + G + + + M K + W T+L S++G +E
Sbjct: 315 FGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 220/411 (53%), Gaps = 11/411 (2%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP 165
L++ YS CG L+ + VF E S W M S N+ +A+ ++ +M V P
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVS-WTTMI---SSNK--DDAVSIFLNMRFDGVYP 370
Query: 166 GNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVF 225
F + A + G IH K ++ V N+ + Y + D + F
Sbjct: 371 NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAF 430
Query: 226 EVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICA--QLT 283
E + R ++SWN +I+GF+ G E L F + E M + T +VL A +
Sbjct: 431 EDITFREIISWNAMISGFAQNGFSHEALKMFLSAA-AETMPNEY-TFGSVLNAIAFAEDI 488
Query: 284 ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLA 343
++ G+ H ++K G + + +AL+DMYAK G+I +KVF+ M K+ W ++++
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Query: 344 GYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQ 402
YS +G E ++LF +MI+ N+ PD +TF+S+L+ C+ G+ +G + FN+M + Y ++
Sbjct: 549 AYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLE 608
Query: 403 PSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAER 462
PS EHY+C+VD+LGR+G+L EA + +P S+ S+L SCRL GNV + AE
Sbjct: 609 PSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAEL 668
Query: 463 LFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQI 513
E++P +G+YV + NIYA+ W+ +R+ M + + K+AG SWI +
Sbjct: 669 AMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 719
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 187/389 (48%), Gaps = 14/389 (3%)
Query: 67 SQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDE 126
S L C+ + G +L ++ K + + + + IT+YS G ARRVF DE
Sbjct: 178 STALSFCVGSEGFLLGLQLQSTVV--KTGLESDLVVGNSFITMYSRSGSFRGARRVF-DE 234
Query: 127 EEDPPESVWVAMAIGYSRN-RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV 185
W ++ G S+ EA++++RDM+ VE + +F+ + C D ++
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKL 294
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
R IH KR E+ V N L+ Y +CG V VF M +RNVVSW T+I+
Sbjct: 295 ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD 354
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
+ + F M+ +G+ + +T ++ + G +IHG +K+G ++
Sbjct: 355 -----DAVSIFLNMRF-DGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
+ N+ + +YAK ++ KK F+ + +++ SWN M++G++ NG +A+ +F
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET 468
Query: 366 IRPDGITFVSLLSGCSHSGLTS--EGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDE 423
+ P+ TF S+L+ + + S +GQ+ + G+ + L+D+ + G +DE
Sbjct: 469 M-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 527
Query: 424 ALTVARNMPMKLSGSIWGSLLNSCRLDGN 452
+ V M K + +W S++++ G+
Sbjct: 528 SEKVFNEMSQK-NQFVWTSIISAYSSHGD 555
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 163/345 (47%), Gaps = 15/345 (4%)
Query: 64 EDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVF 123
++++ L L R L+ G ++H + + + ++ +Y GR D A +F
Sbjct: 77 DEVTLCLALKACRGDLKRGCQIHG--FSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 124 QDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS 183
++ DP W + G+ N++ AL M + V F +S AL C
Sbjct: 135 ENLV-DPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGF 190
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
+G + + + K E+D VV N+ + Y G RVF+ M ++++SWN+L++G
Sbjct: 191 LLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL 250
Query: 244 SGQGKV-FETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKA 302
S +G FE + FR M ++EG+ ++ T+V+ C T L ++IHG +K G ++
Sbjct: 251 SQEGTFGFEAVVIFRDM-MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 309
Query: 303 DRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMI 362
+ N LM Y+KCG + K VF M +++ SW TM I+ + A+ +F M
Sbjct: 310 LLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTM-----ISSNKDDAVSIFLNMR 364
Query: 363 RSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGV--QPSL 405
+ P+ +TFV L++ + EG K L G +PS+
Sbjct: 365 FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 152/321 (47%), Gaps = 11/321 (3%)
Query: 172 VALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR 231
+ALKAC GD + G IH + V+NA++ Y + G + L +FE +
Sbjct: 83 LALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDP 140
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
+VVSWNT+++GF F G+ F T +T L C G ++
Sbjct: 141 DVVSWNTILSGFDDNQIALN----FVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL 196
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQI 351
+VK+G ++D + N+ + MY++ GS ++VFD M KD+ SWN++L+G S G
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF 256
Query: 352 E-KAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYAC 410
+A+ +F +M+R + D ++F S+++ C H ++ L G + LE
Sbjct: 257 GFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNI 316
Query: 411 LVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNN 470
L+ + G L+ +V M + S W ++++S + D VS+ R + PN
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVS-WTTMISSNK-DDAVSIFLNM--RFDGVYPNE 372
Query: 471 AGNYVMLSNIYADAGMWEGVK 491
+++ + + + EG+K
Sbjct: 373 VTFVGLINAVKCNEQIKEGLK 393
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 151/444 (34%), Positives = 226/444 (50%), Gaps = 19/444 (4%)
Query: 99 NPTLKSKLITLYSVCGRLDE----ARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLV 154
N SKL+T + L++ A +F D E P V+ M SR+ L
Sbjct: 42 NTYAISKLLTAFLHLPNLNKHFHYASSIF-DSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 155 YRDMLARSVE---PGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEE-ADQVVNNALLR 210
+ M+ E P F + AC VG+ IH + K +D V +LR
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 211 FYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWI 270
YVE D +VF+ +PQ +VV W+ L+ G+ G E L+ F+ M L G+
Sbjct: 161 IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEM-LVRGIEPDEF 219
Query: 271 TLTTVLPICAQLTALHSGKEIHGQIVKSGK--KADRPLLNALMDMYAKCGSIGYCKKVFD 328
++TT L CAQ+ AL GK IH + VK + ++D + AL+DMYAKCG I +VF+
Sbjct: 220 SVTTALTACAQVGALAQGKWIH-EFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFE 278
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN-IRPDGITFVSLLSGCSHSGLTS 387
+ +++ SW ++ GY+ G +KA D + R + I+PD + + +L+ C+H G
Sbjct: 279 KLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLE 338
Query: 388 EGQKFF-NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
EG+ N+ YG+ P EHY+C+VD++ R+G+LD+AL + MPMK S+WG+LLN
Sbjct: 339 EGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
Query: 447 CRLDGNVSLAETAAERLFEIEPNNA----GNYVMLSNIYADAGMWEGVKRVREMMAIRGI 502
CR NV L E A + L ++E N V LSNIY +VR M+ RGI
Sbjct: 399 CRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGI 458
Query: 503 KKDAGCSWIQIKQRIHTFVAGGSS 526
+K G S +++ + FV+G S
Sbjct: 459 RKTPGWSLLEVDGIVTKFVSGDVS 482
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 225/443 (50%), Gaps = 17/443 (3%)
Query: 99 NPTLKSKLITLYSVCGRLDE----ARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLV 154
N SKL+T + L++ A +F D E P V+ M SR+ L
Sbjct: 42 NTYAISKLLTAFLHLPNLNKHFHYASSIF-DSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 155 YRDMLARSVE---PGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEE-ADQVVNNALLR 210
+ M+ E P F + AC VG+ IH + K +D V +LR
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 211 FYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWI 270
YVE D +VF+ +PQ +VV W+ L+ G+ G E L+ FR M +K G+
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVK-GLEPDEF 219
Query: 271 TLTTVLPICAQLTALHSGKEIHGQIVK-SGKKADRPLLNALMDMYAKCGSIGYCKKVFDG 329
++TT L CAQ+ AL GK IH + K S ++D + AL+DMYAKCG I +VF
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKK 279
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN-IRPDGITFVSLLSGCSHSGLTSE 388
+ +++ SW ++ GY+ G +KA+ + + R + I+PD + + +L+ C+H G E
Sbjct: 280 LTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEE 339
Query: 389 GQKFF-NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
G+ N+ Y + P EHY+C+VD++ R+G+LD+AL + MPMK S+WG+LLN C
Sbjct: 340 GRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGC 399
Query: 448 RLDGNVSLAETAAERLFEIEPNNA----GNYVMLSNIYADAGMWEGVKRVREMMAIRGIK 503
R NV L E A + L ++E N V LSNIY +VR M+ RG++
Sbjct: 400 RTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVR 459
Query: 504 KDAGCSWIQIKQRIHTFVAGGSS 526
K G S +++ + FV+G S
Sbjct: 460 KTPGWSVLEVDGNVTKFVSGDVS 482
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 230/418 (55%), Gaps = 16/418 (3%)
Query: 114 GRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFS 171
GR+DEA +F E P V W AM G ++N EA ++ M R++ N +
Sbjct: 185 GRIDEAMNLF---ERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMIT 241
Query: 172 VALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR 231
+ ++R+ A QL + E D N ++ ++ +F+ MP++
Sbjct: 242 GYAQ------NNRIDEA--DQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK 293
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
NV+SW T+I G+ + E L+ F M + + T ++L C+ L L G++I
Sbjct: 294 NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQI 353
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDG--MESKDLTSWNTMLAGYSING 349
H I KS + + + +AL++MY+K G + +K+FD + +DL SWN+M+A Y+ +G
Sbjct: 354 HQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHG 413
Query: 350 QIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF-NLMQDYGVQPSLEHY 408
++AI+++++M + +P +T+++LL CSH+GL +G +FF +L++D + EHY
Sbjct: 414 HGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHY 473
Query: 409 ACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEP 468
CLVD+ GR+G+L + +LS S +G++L++C + VS+A+ +++ E
Sbjct: 474 TCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGS 533
Query: 469 NNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSS 526
++AG YV++SNIYA G E +R M +G+KK GCSW+++ ++ H FV G S
Sbjct: 534 DDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKS 591
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 156/321 (48%), Gaps = 22/321 (6%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
+ +IT Y G + EAR +F + W AM GY R++ A +++++M R+V
Sbjct: 81 THVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV 140
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDE--EADQVVNNALLRFYVECGCSGDV 221
V+ D G ++ GR I L DE E + V N++++ V+ G +
Sbjct: 141 --------VSWNTMID-GYAQSGR-IDKALELFDEMPERNIVSWNSMVKALVQRGRIDEA 190
Query: 222 LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQ 281
+ +FE MP+R+VVSW ++ G + GKV E F M E SW + T AQ
Sbjct: 191 MNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM--PERNIISWNAMITGY---AQ 245
Query: 282 LTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTM 341
+ Q+ + + D N ++ + + + +FD M K++ SW TM
Sbjct: 246 NNRIDEAD----QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTM 301
Query: 342 LAGYSINGQIEKAIDLFDEMIRS-NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
+ GY N + E+A+++F +M+R +++P+ T+VS+LS CS EGQ+ L+
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 401 VQPSLEHYACLVDILGRSGKL 421
Q + + L+++ +SG+L
Sbjct: 362 HQKNEIVTSALLNMYSKSGEL 382
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 52/255 (20%)
Query: 214 ECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLT 273
+ G + ++F+ +P+R+VV+W +I G+ G + E + F + ++ + +W
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNV-VTW---- 112
Query: 274 TVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK 333
TA+ SG Y + + + +F M +
Sbjct: 113 ---------TAMVSG-------------------------YLRSKQLSIAEMLFQEMPER 138
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
++ SWNTM+ GY+ +G+I+KA++LFDEM NI +++ S++ G E F
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLF 194
Query: 394 NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNV 453
M V + +VD L ++GK+DEA + MP + S W +++ + +
Sbjct: 195 ERMPRRDVVS----WTAMVDGLAKNGKVDEARRLFDCMPERNIIS-WNAMITGYAQNNRI 249
Query: 454 SLAETAAERLFEIEP 468
A++LF++ P
Sbjct: 250 D----EADQLFQVMP 260
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 295 IVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKA 354
I S + P L+ K G I +K+FDG+ +D+ +W ++ GY G + +A
Sbjct: 37 IYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREA 96
Query: 355 IDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDI 414
+LFD R + R + +T+ +++SG S S + F M + V + ++D
Sbjct: 97 RELFD---RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS----WNTMIDG 149
Query: 415 LGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERL 463
+SG++D+AL + MP + S W S++ + G + A ER+
Sbjct: 150 YAQSGRIDKALELFDEMPERNIVS-WNSMVKALVQRGRIDEAMNLFERM 197
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 218/421 (51%), Gaps = 44/421 (10%)
Query: 93 KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL 152
+ R +N + +I Y G + AR +F D+ +D W M GY ++A
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLF-DQMKDRDTISWNTMIDGYVHVSRMEDAF 332
Query: 153 LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFY 212
++ +M R N S G + VG N L R Y
Sbjct: 333 ALFSEMPNRDAHSWNMMVS---------GYASVG------------------NVELARHY 365
Query: 213 VECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
FE P+++ VSWN++IA + E +D F M + EG TL
Sbjct: 366 ------------FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNI-EGEKPDPHTL 412
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES 332
T++L L L G ++H QIV D P+ NAL+ MY++CG I +++FD M+
Sbjct: 413 TSLLSASTGLVNLRLGMQMH-QIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKL 471
Query: 333 K-DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQ- 390
K ++ +WN M+ GY+ +G +A++LF M + I P ITFVS+L+ C+H+GL E +
Sbjct: 472 KREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKA 531
Query: 391 KFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD 450
+F ++M Y ++P +EHY+ LV++ G+ +EA+ + +MP + ++WG+LL++CR+
Sbjct: 532 QFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIY 591
Query: 451 GNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSW 510
NV LA AAE + +EP ++ YV+L N+YAD G+W+ +VR M + IKK+ G SW
Sbjct: 592 NNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSW 651
Query: 511 I 511
+
Sbjct: 652 V 652
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 133/323 (41%), Gaps = 53/323 (16%)
Query: 114 GRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVA 173
G + EAR +F+ E + W M GY + R +A ++ M R V N S
Sbjct: 54 GYIAEARDIFEKLEARNTVT-WNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMIS-G 111
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNV 233
+C + R + ++ RD + N ++ Y + G+ L +FE MP+RN
Sbjct: 112 YVSCGGIRFLEEARKLFDEMPSRDSFS----WNTMISGYAKNRRIGEALLLFEKMPERNA 167
Query: 234 VSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT--------LTTVLPICAQLTAL 285
VSW+ +I GF G+V + FR M +K+ + L+ + Q +L
Sbjct: 168 VSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSL 227
Query: 286 HSGKE-----IHGQIVKSGKK----ADRPLL--------------------------NAL 310
SG+E + IV G++ A R L N++
Sbjct: 228 VSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSM 287
Query: 311 MDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDG 370
+ Y K G + + +FD M+ +D SWNTM+ GY ++E A LF EM D
Sbjct: 288 IKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DA 343
Query: 371 ITFVSLLSGCSHSGLTSEGQKFF 393
++ ++SG + G + +F
Sbjct: 344 HSWNMMVSGYASVGNVELARHYF 366
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 51/321 (15%)
Query: 25 HHNHKPP-----PLNPTLKSLCKSGKLEEALRL-----IESPNPTPYQDEDISQLLHLCI 74
H+ K P N + + K+ +EA+ L IE P P+ ++ LL
Sbjct: 364 HYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHT---LTSLLSAST 420
Query: 75 SRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV 134
+L G ++HQ ++ + VI + + + LIT+YS CG + E+RR+F + +
Sbjct: 421 GLVNLRLGMQMHQIVVKT---VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVIT 477
Query: 135 WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLA 194
W AM GY+ + + EAL ++ M + + P + F L AC HA L
Sbjct: 478 WNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACA-----------HAGLV 526
Query: 195 KRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLD 254
DE Q V+ ++ V+++ PQ + +++L+ SGQG+ E +
Sbjct: 527 --DEAKAQFVS---------------MMSVYKIEPQ--MEHYSSLVNVTSGQGQFEEAMY 567
Query: 255 AFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMY 314
+M + W L I + H E ++ ++ P + L +MY
Sbjct: 568 IITSMPFEPDKTV-WGALLDACRIYNNVGLAHVAAEAMSRL---EPESSTPYV-LLYNMY 622
Query: 315 AKCGSIGYCKKVFDGMESKDL 335
A G +V MESK +
Sbjct: 623 ADMGLWDEASQVRMNMESKRI 643
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 299 GKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLF 358
G +A LN ++ + G I + +F+ +E+++ +WNTM++GY ++ +A LF
Sbjct: 39 GFRATNKELNQMI----RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLF 94
Query: 359 DEMIRSNIRPDGITFVSLLSG---CSHSGLTSEGQKFFNLMQDYGVQPSLEHYA--CLVD 413
D M + ++ +T+ +++SG C E +K F+ M PS + ++ ++
Sbjct: 95 DVMPKRDV----VTWNTMISGYVSCGGIRFLEEARKLFDEM------PSRDSFSWNTMIS 144
Query: 414 ILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
++ ++ EAL + MP + + S W +++ +G V A
Sbjct: 145 GYAKNRRIGEALLLFEKMPERNAVS-WSAMITGFCQNGEVDSA 186
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 154/574 (26%), Positives = 268/574 (46%), Gaps = 84/574 (14%)
Query: 34 NPTLKSLCKSGKLEEALRLI-----ESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQH 88
N + ++GK EEA+RL + PT +S L + +E G++ H
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVT---VSTCLSASANMGGVEEGKQSHAI 299
Query: 89 LLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLS 148
+ G ++N L + L+ Y G ++ A VF D + W + GY + L
Sbjct: 300 AI-VNGMELDN-ILGTSLLNFYCKVGLIEYAEMVF-DRMFEKDVVTWNLIISGYVQQGLV 356
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
++A+ + + M ++ + + A + ++G+ + + E+D V+ + +
Sbjct: 357 EDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTV 416
Query: 209 LRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIA-----GFSGQ----------------- 246
+ Y +CG D +VF+ +++++ WNTL+A G SG+
Sbjct: 417 MDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNV 476
Query: 247 -------------GKVFETLDAFRAMQ--------------------------------- 260
G+V E D F MQ
Sbjct: 477 ITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRK 536
Query: 261 -LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADR-PLLNALMDMYAKCG 318
+ G+ + ++T L CA L +LH G+ IHG I+++ + + + +L+DMYAKCG
Sbjct: 537 MQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCG 596
Query: 319 SIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLS 378
I +KVF +L N M++ Y++ G +++AI L+ + ++PD IT ++LS
Sbjct: 597 DINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLS 656
Query: 379 GCSHSGLTSEGQKFF-NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSG 437
C+H+G ++ + F +++ ++P LEHY +VD+L +G+ ++AL + MP K
Sbjct: 657 ACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDA 716
Query: 438 SIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMM 497
+ SL+ SC L + + +L E EP N+GNYV +SN YA G W+ V ++REMM
Sbjct: 717 RMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMM 776
Query: 498 AIRGIKKDAGCSWIQI--KQRIHTFVAGGSSDFR 529
+G+KK GCSWIQI ++ +H FVA + R
Sbjct: 777 KAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTR 810
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 177/330 (53%), Gaps = 2/330 (0%)
Query: 102 LKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
+ S L +Y CG LD+A +VF DE D W A+ +GY +N ++EA+ ++ DM +
Sbjct: 210 VASSLADMYGKCGVLDDASKVF-DEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ 268
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV 221
VEP S L A ++G G+ HA E D ++ +LL FY + G
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
Query: 222 LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQ 281
VF+ M +++VV+WN +I+G+ QG V + + + M+L E + + +TL T++ A+
Sbjct: 329 EMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRL-EKLKYDCVTLATLMSAAAR 387
Query: 282 LTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTM 341
L GKE+ ++ ++D L + +MDMYAKCGSI KKVFD KDL WNT+
Sbjct: 388 TENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTL 447
Query: 342 LAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGV 401
LA Y+ +G +A+ LF M + P+ IT+ ++ +G E + F MQ G+
Sbjct: 448 LAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGI 507
Query: 402 QPSLEHYACLVDILGRSGKLDEALTVARNM 431
P+L + +++ + ++G +EA+ R M
Sbjct: 508 IPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 211/431 (48%), Gaps = 18/431 (4%)
Query: 25 HHNHKPPPLNPT-----LKSLCKSGKLEEALRLIESPNPTPYQ--DEDISQLLHLCISRK 77
HH+ + + T + SLCK+G+++EAL L+ + + E ++L C+ +
Sbjct: 25 HHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYER 84
Query: 78 SLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVA 137
L G+++H +L + N +++KL+ Y+ C L+ A +F S W A
Sbjct: 85 DLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFS-WAA 143
Query: 138 MAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD 197
+ R L + AL+ + +ML + P NF KAC + SR GR +H + K
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203
Query: 198 EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFR 257
E V ++L Y +CG D +VF+ +P RN V+WN L+ G+ GK E + F
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFS 263
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M+ K+G+ + +T++T L A + + GK+ H + +G + D L +L++ Y K
Sbjct: 264 DMR-KQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKV 322
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
G I Y + VFD M KD+ +WN +++GY G +E AI + M ++ D +T +L+
Sbjct: 323 GLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLM 382
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEH----YACLVDILGRSGKLDEALTVARNMPM 433
S + +E K +Q Y ++ S E + ++D+ + G + +A V +
Sbjct: 383 SAAAR----TENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE 438
Query: 434 KLSGSIWGSLL 444
K +W +LL
Sbjct: 439 K-DLILWNTLL 448
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 170/390 (43%), Gaps = 49/390 (12%)
Query: 124 QDEEEDPPESV-WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGD 182
DE+ P S + +N KEAL + +M R++ G + L+ C D
Sbjct: 26 HDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERD 85
Query: 183 SRVGRAIHAQLAKRDE--EADQVVNNALLRFYVECGCSGDVLRVFEVMPQ----RNVVSW 236
G+ IHA++ K + ++ + L+ FY +C D L + EV+ RNV SW
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKC----DALEIAEVLFSKLRVRNVFSW 141
Query: 237 NTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIV 296
+I G L F M E +++ + V C L G+ +HG +V
Sbjct: 142 AAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFV-VPNVCKACGALKWSRFGRGVHGYVV 200
Query: 297 KSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAID 356
KSG + + ++L DMY KCG + KVFD + ++ +WN ++ GY NG+ E+AI
Sbjct: 201 KSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIR 260
Query: 357 LFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILG 416
LF +M + + P +T + LS ++ G EG++ H +V+
Sbjct: 261 LFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ--------------SHAIAIVN--- 303
Query: 417 RSGKLDEALTVARNMPMKLSGSIWGSLLN-SCRLDGNVSLAETAAERLFEIEPNNAGNYV 475
M+L + SLLN C++ G + AE +R+FE + +
Sbjct: 304 ---------------GMELDNILGTSLLNFYCKV-GLIEYAEMVFDRMFE---KDVVTWN 344
Query: 476 MLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
++ + Y G+ E + ++M + +K D
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYD 374
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 229/458 (50%), Gaps = 58/458 (12%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
S +++Y G+L A VF+ Y + K+AL Y D+L
Sbjct: 71 SYTVSIYRSIGKLYCANPVFK----------------AYLVSSSPKQALGFYFDILRFGF 114
Query: 164 EPGNFAFSVALKAC---TDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGC--- 217
P ++ F V+L +C T DS G+ H Q K + V N+L+ Y CG
Sbjct: 115 VPDSYTF-VSLISCIEKTCCVDS--GKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDL 171
Query: 218 -------------------------SGDVL---RVFEVMPQRNVVSWNTLIAGFSGQGKV 249
+GDVL ++F+ MP +N++SWN +I+ + G
Sbjct: 172 AKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNP 231
Query: 250 FETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNA 309
++ FR M ++ G + TL +L C + L G+ +H ++++ + + A
Sbjct: 232 GVSISLFREM-VRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTA 290
Query: 310 LMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPD 369
L+DMY KC +G +++FD + ++ +WN M+ + ++G+ E ++LF+ MI +RPD
Sbjct: 291 LIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPD 350
Query: 370 GITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVA 428
+TFV +L GC+ +GL S+GQ +++LM D + ++P+ H C+ ++ +G +EA
Sbjct: 351 EVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEAL 410
Query: 429 RNMP---MKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAG 485
+N+P + + W +LL+S R GN +L E+ A+ L E +P N Y +L NIY+ G
Sbjct: 411 KNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTG 470
Query: 486 MWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAG 523
WE V RVREM+ R I + GC + +K+ +H G
Sbjct: 471 RWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG 508
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/517 (28%), Positives = 259/517 (50%), Gaps = 46/517 (8%)
Query: 30 PPPLNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQ 87
P P N + S ++ + +E++ + + + ++ + ++ C + +G+ +H
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 88 HLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRL 147
+ S R N + + LI++Y G++D ARR+F E S W A+ Y+
Sbjct: 209 SIEVSSHRC--NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS-WNAIINCYTSEEK 265
Query: 148 SKEALLVYRDMLARSVEP-----------------------------------GNFAFSV 172
EA + M VE G+ A
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 173 ALKACTDVGDSRVGRAIHAQLAKRDEEADQV--VNNALLRFYVECGCSGDVLRVFEVMPQ 230
LKAC+ +G + G+ H + + + + V N+L+ Y C VF+ +
Sbjct: 326 GLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 231 RNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKE 290
++ +WN++I+GF+ + ET + M L G + ITL ++LP+ A++ L GKE
Sbjct: 386 NSLSTWNSIISGFAYNERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGNLQHGKE 444
Query: 291 IHGQIVKSGKKADRPLL-NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSING 349
H I++ D +L N+L+DMYAK G I K+VFD M +D ++ +++ GY G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 350 QIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHY 408
+ E A+ F +M RS I+PD +T V++LS CSHS L EG F M+ +G++ LEHY
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 409 ACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAER-LFEIE 467
+C+VD+ R+G LD+A + +P + S ++ +LL +C + GN ++ E AA++ L E +
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETK 624
Query: 468 PNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKK 504
P + G+Y++L+++YA G W + V+ +++ G++K
Sbjct: 625 PEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/518 (24%), Positives = 225/518 (43%), Gaps = 49/518 (9%)
Query: 30 PPPLNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDI----SQLLHLCISRKSLEHGQKL 85
P L + + G+L EA R E + + LL C+ GQ+L
Sbjct: 46 PQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQL 105
Query: 86 HQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRN 145
H H + S + L KL+T YS LDEA+ + ++ E P W + Y RN
Sbjct: 106 HAHCISSGLEF--DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP-WNVLIGSYIRN 162
Query: 146 RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN 205
+ +E++ VY+ M+++ + F + +KAC + D GR +H + + V
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVC 222
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
NAL+ Y G R+F+ M +R+ VSWN +I ++ + K+ E M L G+
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLS-GV 281
Query: 266 GFSWITLTTV-----------------------------------LPICAQLTALHSGKE 290
S +T T+ L C+ + AL GK
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 291 IHGQIVKSGKKAD--RPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSIN 348
H +++S + + N+L+ MY++C + + VF +E+ L++WN++++G++ N
Sbjct: 342 FHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF-NLMQDYGVQPSLEH 407
+ E+ L EM+ S P+ IT S+L + G G++F +++ + L
Sbjct: 402 ERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL 461
Query: 408 YACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC-RL-DGNVSLAETAAERLFE 465
+ LVD+ +SG++ A V +M K + SL++ RL G V+LA
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSM-RKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 466 IEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIK 503
I+P++ +LS + EG +M + GI+
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIR 558
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/517 (28%), Positives = 259/517 (50%), Gaps = 46/517 (8%)
Query: 30 PPPLNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQ 87
P P N + S ++ + +E++ + + + ++ + ++ C + +G+ +H
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 88 HLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRL 147
+ S R N + + LI++Y G++D ARR+F E S W A+ Y+
Sbjct: 209 SIEVSSHRC--NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS-WNAIINCYTSEEK 265
Query: 148 SKEALLVYRDMLARSVEP-----------------------------------GNFAFSV 172
EA + M VE G+ A
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 173 ALKACTDVGDSRVGRAIHAQLAKRDEEADQV--VNNALLRFYVECGCSGDVLRVFEVMPQ 230
LKAC+ +G + G+ H + + + + V N+L+ Y C VF+ +
Sbjct: 326 GLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 231 RNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKE 290
++ +WN++I+GF+ + ET + M L G + ITL ++LP+ A++ L GKE
Sbjct: 386 NSLSTWNSIISGFAYNERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGNLQHGKE 444
Query: 291 IHGQIVKSGKKADRPLL-NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSING 349
H I++ D +L N+L+DMYAK G I K+VFD M +D ++ +++ GY G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 350 QIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHY 408
+ E A+ F +M RS I+PD +T V++LS CSHS L EG F M+ +G++ LEHY
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 409 ACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAER-LFEIE 467
+C+VD+ R+G LD+A + +P + S ++ +LL +C + GN ++ E AA++ L E +
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETK 624
Query: 468 PNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKK 504
P + G+Y++L+++YA G W + V+ +++ G++K
Sbjct: 625 PEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/518 (24%), Positives = 225/518 (43%), Gaps = 49/518 (9%)
Query: 30 PPPLNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDI----SQLLHLCISRKSLEHGQKL 85
P L + + G+L EA R E + + LL C+ GQ+L
Sbjct: 46 PQVLFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQL 105
Query: 86 HQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRN 145
H H + S + L KL+T YS LDEA+ + ++ E P W + Y RN
Sbjct: 106 HAHCISSGLEF--DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP-WNVLIGSYIRN 162
Query: 146 RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN 205
+ +E++ VY+ M+++ + F + +KAC + D GR +H + + V
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVC 222
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
NAL+ Y G R+F+ M +R+ VSWN +I ++ + K+ E M L G+
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLS-GV 281
Query: 266 GFSWITLTTV-----------------------------------LPICAQLTALHSGKE 290
S +T T+ L C+ + AL GK
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 291 IHGQIVKSGKKAD--RPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSIN 348
H +++S + + N+L+ MY++C + + VF +E+ L++WN++++G++ N
Sbjct: 342 FHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF-NLMQDYGVQPSLEH 407
+ E+ L EM+ S P+ IT S+L + G G++F +++ + L
Sbjct: 402 ERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL 461
Query: 408 YACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC-RL-DGNVSLAETAAERLFE 465
+ LVD+ +SG++ A V +M K + SL++ RL G V+LA
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSM-RKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 466 IEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIK 503
I+P++ +LS + EG +M + GI+
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIR 558
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 207/422 (49%), Gaps = 67/422 (15%)
Query: 141 GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAK----- 195
Y+ + + AL V+R+ML V P ++F+ LKAC GR IH K
Sbjct: 114 AYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVT 173
Query: 196 --------------------------RDEEADQVVNNALLRFYVECGCSGDVLRVFEVMP 229
R D V N+LL Y+E G + +F+ M
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 230 QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSW-------------------- 269
+RNV SWN +I+G++ G V E + F +M +++ + SW
Sbjct: 234 ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVV--SWNAMVTAYAHVGCYNEVLEVF 291
Query: 270 -------------ITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAK 316
TL +VL CA L +L G+ +H I K G + + L AL+DMY+K
Sbjct: 292 NKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSK 351
Query: 317 CGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
CG I +VF +D+++WN++++ S++G + A+++F EM+ +P+GITF+ +
Sbjct: 352 CGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGV 411
Query: 377 LSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKL 435
LS C+H G+ + +K F +M Y V+P++EHY C+VD+LGR GK++EA + +P
Sbjct: 412 LSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADE 471
Query: 436 SGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVRE 495
+ + SLL +C+ G + AE A RL E+ ++ Y +SN+YA G WE V R
Sbjct: 472 ASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRR 531
Query: 496 MM 497
M
Sbjct: 532 NM 533
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 13/230 (5%)
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
N + N++I ++ L FR M L + + T VL CA G++I
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKY-SFTFVLKACAAFCGFEEGRQI 162
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQI 351
HG +KSG D + N L+++Y + G +KV D M +D SWN++L+ Y G +
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLV 222
Query: 352 EKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACL 411
++A LFDEM N+ ++ ++SG + +GL E ++ F+ M V + +
Sbjct: 223 DEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVS----WNAM 274
Query: 412 VDILGRSGKLDEALTVARNM----PMKLSGSIWGSLLNSCRLDGNVSLAE 457
V G +E L V M K G S+L++C G++S E
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 128/299 (42%), Gaps = 38/299 (12%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
+ L++ Y G +DEAR +F + EE ES W M GY+ L KEA V+ M R V
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEMEERNVES-WNFMISGYAAAGLVKEAKEVFDSMPVRDV 268
Query: 164 --------------------------------EPGNFAFSVALKACTDVGDSRVGRAIHA 191
+P F L AC +G G +H
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 192 QLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFE 251
+ K E + + AL+ Y +CG L VF +R+V +WN++I+ S G +
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 252 TLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPL--LNA 309
L+ F M + EG + IT VL C + L +++ +++ S + + +
Sbjct: 389 ALEIFSEM-VYEGFKPNGITFIGVLSACNHVGMLDQARKLF-EMMSSVYRVEPTIEHYGC 446
Query: 310 LMDMYAKCGSIGYCKKVFDGMESKDLTS-WNTMLAGYSINGQIEKAIDLFDEMIRSNIR 367
++D+ + G I +++ + + + + + ++L GQ+E+A + + ++ N+R
Sbjct: 447 MVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLR 505
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 109/235 (46%), Gaps = 7/235 (2%)
Query: 271 TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYA---KCGSIGYCKKVF 327
T +L + +L ++ H ++K+G D + L+ A + ++ Y +
Sbjct: 38 TPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSIL 97
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
+ + S + + N+++ Y+ + E A+ +F EM+ + PD +F +L C+
Sbjct: 98 NRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE 157
Query: 388 EGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
EG++ L G+ + LV++ GRSG + A V MP++ + S W SLL++
Sbjct: 158 EGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS-WNSLLSAY 216
Query: 448 RLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGI 502
G L + A E+E N ++ + + YA AG+ + K V + M +R +
Sbjct: 217 LEKG---LVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV 268
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
+L C S SL G+ +H ++ G IE L + L+ +YS CG++D+A VF+ +
Sbjct: 310 VLSACASLGSLSQGEWVHVYI-DKHGIEIEG-FLATALVDMYSKCGKIDKALEVFRATSK 367
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVG 181
S W ++ S + L K+AL ++ +M+ +P F L AC VG
Sbjct: 368 RDV-STWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVG 419
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 155/506 (30%), Positives = 245/506 (48%), Gaps = 77/506 (15%)
Query: 109 LYSVC--GRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDML--ARSVE 164
+Y C G + EA R+F + E S W AM G++ N L +EAL+++ +M +V
Sbjct: 238 VYGYCRYGDVREAYRLFCEMPERNIVS-WTAMISGFAWNELYREALMLFLEMKKDVDAVS 296
Query: 165 PGNFAFSVALKACTDVGDS--RVGRAIHAQLAKRDEEA---DQVVNNALLRFYVECGC-- 217
P AC +G R+G +HAQ+ E D + +L+ Y G
Sbjct: 297 PNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIA 356
Query: 218 ------------------------SGDVLR---VFE-VMPQRNVVSWNTLIAGFSGQGKV 249
+GD+ R +FE V + VSW ++I G+ G V
Sbjct: 357 SAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDV 416
Query: 250 FETLDAFRAMQLKEGMGFSWI------------------------------TLTTVLPIC 279
F+ + K+G+ ++ + T + +L
Sbjct: 417 SRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSA 476
Query: 280 AQLTALHSGKEIHGQIVKSGKKADRPLL--NALMDMYAKCGSIGYCKKVFDGMESKDLTS 337
+ L GK IH I K+ D L+ N+L+ MYAKCG+I ++F M KD S
Sbjct: 477 GATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVS 536
Query: 338 WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ 397
WN+M+ G S +G +KA++LF EM+ S +P+ +TF+ +LS CSHSGL + G + F M+
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK 596
Query: 398 D-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD----GN 452
+ Y +QP ++HY ++D+LGR+GKL EA +P +++G+LL C L+
Sbjct: 597 ETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDA 656
Query: 453 VSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQ 512
+AE AA RL E++P NA +V L N+YA G + K +R+ M I+G+KK GCSW+
Sbjct: 657 EGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVV 716
Query: 513 IKQRIHTFVAGGSSDFRSSAEYLKIW 538
+ R + F++G S ++ L I+
Sbjct: 717 VNGRANVFLSGDKSASEAAQMVLPIF 742
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 184/453 (40%), Gaps = 118/453 (26%)
Query: 74 ISRKSLEHGQKLHQHLLH------SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEE 127
I R+ E G +HLL S RV+ +L SK Y+ G LDEAR +F
Sbjct: 49 ILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSK----YAKTGYLDEARVLF---- 100
Query: 128 EDPPESVWV---AMAIGYSRNRLSKEALLVYRDMLARSVEPGNF-AFSVALKACTDVGDS 183
E PE V AM GY + R EA ++R+M P N +++V L A D G S
Sbjct: 101 EVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM------PKNVVSWTVMLTALCDDGRS 154
Query: 184 RVGRAIHAQLAKRD-----------------EEADQVVN----------NALLRFYVECG 216
+ ++ +R+ E+A QV + NA+++ Y+E
Sbjct: 155 EDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIEND 214
Query: 217 ---------------------------CS-GDV---LRVFEVMPQRNVVSWNTLIAGFSG 245
C GDV R+F MP+RN+VSW +I+GF+
Sbjct: 215 GMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAW 274
Query: 246 QGKVFETLDAFRAMQLK-EGMGFSWITLTTVLPICAQLTALHS--GKEIHGQIVKSGKKA 302
E L F M+ + + + TL ++ C L G+++H Q++ +G +
Sbjct: 275 NELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWET 334
Query: 303 ---DRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFD 359
D L +L+ MYA G I + + + ES DL S N ++ Y NG +E+A LF+
Sbjct: 335 VDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKNGDLERAETLFE 392
Query: 360 E------------MIRSNIRP----------------DGITFVSLLSGCSHSGLTSEGQK 391
MI + DG+T+ ++SG + L +E
Sbjct: 393 RVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAAS 452
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
+ M G++P Y+ L+ G + LD+
Sbjct: 453 LLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 244/463 (52%), Gaps = 12/463 (2%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
++ +L C + ++ G+ +H + +G + + + + LI +YS +D A RVF D
Sbjct: 229 VTSVLKACTVMEDIDVGRSVHGFSIR-RGFDLADVFVCNSLIDMYSKGFDVDSAFRVF-D 286
Query: 126 EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV 185
E W ++ G+ N+ EAL ++ M+ +VE L+ C
Sbjct: 287 ETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLP 346
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
++IH + +R E+++V ++L+ Y C D V + M ++VVS +T+I+G +
Sbjct: 347 CKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAH 406
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHG-QIVKSGKKADR 304
G+ E + F M+ IT+ ++L C+ L + K HG I +S D
Sbjct: 407 AGRSDEAISIFCHMRDTPNA----ITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDI 462
Query: 305 PLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRS 364
+ +++D YAKCG+I ++ FD + K++ SW +++ Y+ING +KA+ LFDEM +
Sbjct: 463 SVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQK 522
Query: 365 NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
P+ +T+++ LS C+H GL +G F M + +PSL+HY+C+VD+L R+G++D A
Sbjct: 523 GYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTA 582
Query: 425 LTVARNMP--MKLSGSIWGSLLNSC--RLDGNVSLAETAAERLFEIEPNNAGNYVMLSNI 480
+ + +N+P +K S WG++L+ C R + +E AE L E+EP + Y++ S+
Sbjct: 583 VELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL-ELEPLCSSGYLLASST 641
Query: 481 YADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAG 523
+A WE V +R ++ R ++ AG S ++ F+AG
Sbjct: 642 FAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAG 684
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 166/318 (52%), Gaps = 12/318 (3%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
++H C R G+K+H +++ S I ++++ ++ +Y+ L AR++F DE
Sbjct: 133 VIHAC--RSLWFDGEKIHGYVIRSGFCGI--SSVQNSILCMYADSDSL-SARKLF-DEMS 186
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARS-VEPGNFAFSVALKACTDVGDSRVGR 187
+ W + Y +++ L ++++M+ + EP + LKACT + D VGR
Sbjct: 187 ERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGR 246
Query: 188 AIHAQLAKRDEE-ADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQ 246
++H +R + AD V N+L+ Y + RVF+ RN+VSWN+++AGF
Sbjct: 247 SVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHN 306
Query: 247 GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPL 306
+ E L+ F M ++E + +T+ ++L +C K IHG I++ G +++
Sbjct: 307 QRYDEALEMFHLM-VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVA 365
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI 366
L++L+D Y C + V D M KD+ S +TM++G + G+ ++AI +F M +
Sbjct: 366 LSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT-- 423
Query: 367 RPDGITFVSLLSGCSHSG 384
P+ IT +SLL+ CS S
Sbjct: 424 -PNAITVISLLNACSVSA 440
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 206 NALLRFYVECG--CSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE 263
N++ FY++CG CSG LR F+ M R+ VSWN ++ G G E L F +++
Sbjct: 65 NSIADFYMKCGDLCSG--LREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV-- 120
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYC 323
GF T T VL I A + G++IHG +++SG + N+++ MYA S+
Sbjct: 121 -WGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-A 178
Query: 324 KKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMI-RSNIRPDGITFVSLLSGCS 381
+K+FD M +D+ SW+ ++ Y + + + LF EM+ + PD +T S+L C+
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/440 (32%), Positives = 233/440 (52%), Gaps = 21/440 (4%)
Query: 80 EHGQKLHQHLLHSKGRVIENPTL-KSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAM 138
E G+++H ++ E T+ K+ LI +YS G L ++ RVF+ EE S W A+
Sbjct: 101 ETGRQVHALMIKQGA---ETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVS-WNAL 156
Query: 139 AIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDE 198
G+ RN KEAL V+ M VE F S +K C + + G+ +HA +
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 199 EADQVVNNALLRFYVECGCSGDVLRVFEVMP-QRNVVSWNTLIAGFSGQGKVFETLDAFR 257
+ V+ A++ FY G + ++V+ + + V N+LI+G E AF
Sbjct: 217 DL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKE---AFL 272
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M + + L++ L C+ + L GK+IH +++G +D L N LMDMY KC
Sbjct: 273 LMSRQRP---NVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKC 329
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR--SNIRPDGITFVS 375
G I + +F + SK + SW +M+ Y++NG KA+++F EM S + P+ +TF+
Sbjct: 330 GQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLV 389
Query: 376 LLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNM--- 431
++S C+H+GL EG++ F +M++ Y + P EHY C +DIL ++G+ +E + M
Sbjct: 390 VISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMEN 449
Query: 432 -PMKLSGSIWGSLLNSCRLDGNVSLAETAAERLF-EIEPNNAGNYVMLSNIYADAGMWEG 489
+ +IW ++L++C L+ +++ E A RL E P NA YV++SN YA G W+
Sbjct: 450 DNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDV 509
Query: 490 VKRVREMMAIRGIKKDAGCS 509
V+ +R + +G+ K AG S
Sbjct: 510 VEELRGKLKNKGLVKTAGHS 529
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 114/224 (50%), Gaps = 2/224 (0%)
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLT 283
+F+ +PQR++ S N+ ++ G +TL F + + S T T VL C+ L+
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIH-RASPDLSSHTFTPVLGACSLLS 98
Query: 284 ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLA 343
+G+++H ++K G + AL+DMY+K G + +VF+ +E KDL SWN +L+
Sbjct: 99 YPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLS 158
Query: 344 GYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQP 403
G+ NG+ ++A+ +F M R + T S++ C+ + +G++ ++ G
Sbjct: 159 GFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL 218
Query: 404 SLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
+ A ++ G ++EA+ V ++ + + SL++ C
Sbjct: 219 VVLGTA-MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 193/364 (53%), Gaps = 31/364 (8%)
Query: 279 CAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSW 338
CA L +L K++H ++S + D L N ++ M+ +C SI K+VFD M KD+ SW
Sbjct: 246 CANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSW 305
Query: 339 NTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ- 397
+ M+ YS NG + A+ LF+EM + ++P+ TF+++ C+ G E F+ M+
Sbjct: 306 HLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKN 365
Query: 398 DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAE 457
++G+ P EHY ++ +LG+ G L EA R++P + + W ++ N RL G++ L +
Sbjct: 366 EHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLED 425
Query: 458 TAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRI 517
E + +++P+ A V + K + + K RI
Sbjct: 426 YMEELMVDVDPSKA---------------------VINKIPTPPPKSFKETNMVTSKSRI 464
Query: 518 HTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERL 577
+FR+ Y ++ A K Y+P+T VLHDI++E K + HSERL
Sbjct: 465 --------LEFRNLTFYKDEAKEMA-AKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERL 515
Query: 578 AAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSC 637
A + +I T + I KNLRVC DCH+++K +S++ R++++RD RFHHF++G CSC
Sbjct: 516 AIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSC 575
Query: 638 MDHW 641
D+W
Sbjct: 576 GDYW 579
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 30 PPPLNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHL 89
PPP + LC+ ++A+ L++ P E L C + KSLEH +K+H H
Sbjct: 205 PPPSVEEVMRLCQRRLYKDAIELLDK-GAMP-DRECFVLLFESCANLKSLEHSKKVHDHF 262
Query: 90 LHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSK 149
L SK R +P L + +I+++ C + +A+RVF D D W M YS N +
Sbjct: 263 LQSKFR--GDPKLNNMVISMFGECSSITDAKRVF-DHMVDKDMDSWHLMMCAYSDNGMGD 319
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVG 181
+AL ++ +M ++P F AC VG
Sbjct: 320 DALHLFEEMTKHGLKPNEETFLTVFLACATVG 351
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 124 QDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS 183
Q E PP SV M + + RL K+A+ ++L + P F + ++C ++
Sbjct: 199 QMNEVAPPPSVEEVMRL--CQRRLYKDAI----ELLDKGAMPDRECFVLLFESCANLKSL 252
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
+ +H + D +NN ++ + EC D RVF+ M +++ SW+ ++ +
Sbjct: 253 EHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAY 312
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTAL 285
S G + L F M K G+ + T TV CA + +
Sbjct: 313 SDNGMGDDALHLFEEM-TKHGLKPNEETFLTVFLACATVGGI 353
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/431 (32%), Positives = 212/431 (49%), Gaps = 40/431 (9%)
Query: 110 YSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFA 169
YS G +++A +F E S W M G R EAL+ Y +ML ++P
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVS-WGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVM 307
Query: 170 FSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMP 229
L A S G +H + KR + + ++ FY L+ FE
Sbjct: 308 MVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASV 367
Query: 230 QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSW-------------------- 269
+ ++ S N LIAGF G V + + F K+ FSW
Sbjct: 368 KDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDI--FSWNAMISGYAQSLSPQLALHLF 425
Query: 270 -------------ITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAK 316
IT+ +V + L +L GK H + S + L A++DMYAK
Sbjct: 426 REMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAK 485
Query: 317 CGSIGYCKKVF---DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITF 373
CGSI +F + S ++ WN ++ G + +G + A+DL+ ++ I+P+ ITF
Sbjct: 486 CGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITF 545
Query: 374 VSLLSGCSHSGLTSEGQKFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMP 432
V +LS C H+GL G+ +F M+ D+G++P ++HY C+VD+LG++G+L+EA + + MP
Sbjct: 546 VGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMP 605
Query: 433 MKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKR 492
+K IWG LL++ R GNV +AE AA L I+P++ G VMLSN+YADAG WE V
Sbjct: 606 VKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVAL 665
Query: 493 VREMMAIRGIK 503
VRE M R ++
Sbjct: 666 VREEMRTRDVE 676
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 217/530 (40%), Gaps = 100/530 (18%)
Query: 73 CISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPE 132
C S + G+++H +L K + N + + ++ +Y+ C L +A VF+D +
Sbjct: 51 CASSNDVTCGRQIHCRVL--KSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSA 108
Query: 133 S-------------VWVAMAI-----------------GYSRNRLSKEALLVYRDMLARS 162
S +W A+ + GY++N EA+ ++R+M
Sbjct: 109 SFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLG 168
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL 222
+ + + AC+ +G R + + K E V+ LL Y C C D
Sbjct: 169 IMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDAR 228
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAF-------------------RAMQLKE 263
++F+ MP+RN+V+WN ++ G+S G + + + F R QL E
Sbjct: 229 KLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDE 288
Query: 264 -----------GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSG------------- 299
GM S + + +L A+ G ++HG IVK G
Sbjct: 289 ALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIH 348
Query: 300 ------------------KKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTM 341
K NAL+ + K G + ++VFD KD+ SWN M
Sbjct: 349 FYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAM 408
Query: 342 LAGYSINGQIEKAIDLFDEMIRSN-IRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
++GY+ + + A+ LF EMI S+ ++PD IT VS+ S S G EG++ + +
Sbjct: 409 ISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFST 468
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSI--WGSLLNSCRLDGNVSLAET 458
+ P+ A ++D+ + G ++ AL + S +I W +++ G+ LA
Sbjct: 469 IPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALD 528
Query: 459 AAERL--FEIEPNNAGNYVMLSNIYADAGMWE-GVKRVREMMAIRGIKKD 505
L I+PN+ +V + + AG+ E G M + GI+ D
Sbjct: 529 LYSDLQSLPIKPNSI-TFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD 577
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 169 AFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV------- 221
A AL +C D GR IH ++ K +++ + N++L Y +C D
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 222 ------------------------LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFR 257
L++F+VMP+R+ VS+ TLI G++ + E ++ FR
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M+ G+ + +TL TV+ C+ L + + + +K + + L+ MY C
Sbjct: 163 EMR-NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC 221
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
+ +K+FD M ++L +WN ML GYS G IE+A +LFD++ +I +++ +++
Sbjct: 222 LCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI----VSWGTMI 277
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSG 437
GC E ++ M G++PS +VD+L S + +V + ++L G
Sbjct: 278 DGCLRKNQLDEALVYYTEMLRCGMKPS---EVMMVDLLSASAR-----SVGSSKGLQLHG 329
Query: 438 SI 439
+I
Sbjct: 330 TI 331
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 115/235 (48%), Gaps = 12/235 (5%)
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME 331
L + L CA + G++IH +++KSG ++ + N++++MYAKC + + VF
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
D S+N M+ GY + ++ A+ LFD M + +++ +L+ G + + SE +
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSC----VSYTTLIKGYAQNNQWSEAME 159
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKL-DEALTVARNMPMKLSGSIWGS--LLNSCR 448
F M++ G+ + A ++ G + D + + + +KL G ++ S LL+
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYC 219
Query: 449 LDGNVSLAETAAERLFEIEPN-NAGNYVMLSNIYADAGMWEGVKRVREMMAIRGI 502
L L A +LF+ P N + ++ N Y+ AG+ E + + + + + I
Sbjct: 220 L----CLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI 270
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/449 (32%), Positives = 221/449 (49%), Gaps = 17/449 (3%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKS-KLITLYSVCGRLDEARRVFQDEE 127
L+ LC +++ G +LH L+ +G +E+ S L+ Y CG + EARRVF+
Sbjct: 148 LIRLCTDSTNMKAGIQLHC-LMVKQG--LESSCFPSTSLVHFYGKCGLIVEARRVFE-AV 203
Query: 128 EDPPESVWVAMAIGYSRNRLSKEALLVYRDMLA--RSVEPGNFAFSVALKACTDVGDSRV 185
D +W A+ Y N + EA + + M + F FS L AC
Sbjct: 204 LDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQ 259
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
G+ IHA L K + D V ALL Y + D FE M RNVVSWN +I GF+
Sbjct: 260 GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQ 319
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
G+ E + F M L E + +T +VL CA+ +A+ K++ + K G
Sbjct: 320 NGEGREAMRLFGQMLL-ENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLS 378
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
+ N+L+ Y++ G++ F + DL SW +++ + +G E+++ +F+ M++
Sbjct: 379 VANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-K 437
Query: 366 IRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEA 424
++PD ITF+ +LS CSH GL EG + F M + Y ++ EHY CL+D+LGR+G +DEA
Sbjct: 438 LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEA 497
Query: 425 LTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADA 484
V +MP + S + C + + A++L EIEP NY +LSN Y
Sbjct: 498 SDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSE 557
Query: 485 GMWE--GVKRVREMMAIRGIKKDAGCSWI 511
G W + R RE K GCSW+
Sbjct: 558 GHWNQAALLRKRERRNCYN-PKTPGCSWL 585
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 208/440 (47%), Gaps = 22/440 (5%)
Query: 78 SLEHGQKLHQ-HLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV-- 134
SL+H + Q H K + + L++KL+ Y+ D+A ++F +E P ++
Sbjct: 48 SLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLF---DEMPLRNIVT 104
Query: 135 WVAMAIGYSR-----NRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAI 189
W + G + N + +L V + +F ++ CTD + + G +
Sbjct: 105 WNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQL 164
Query: 190 HAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKV 249
H + K+ E+ + +L+ FY +CG + RVFE + R++V WN L++ + G +
Sbjct: 165 HCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMI 224
Query: 250 FETLDAFRAM-QLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLN 308
E + M K + T +++L C + GK+IH + K + D P+
Sbjct: 225 DEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVAT 280
Query: 309 ALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRP 368
AL++MYAK + ++ F+ M +++ SWN M+ G++ NG+ +A+ LF +M+ N++P
Sbjct: 281 ALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQP 340
Query: 369 DGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVA 428
D +TF S+LS C+ E ++ ++ G L L+ R+G L EAL
Sbjct: 341 DELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCF 400
Query: 429 RNM--PMKLS-GSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAG 485
++ P +S S+ G+L + + ++ + E+ ++L +P+ +LS
Sbjct: 401 HSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKL---QPDKITFLEVLSACSHGGL 457
Query: 486 MWEGVKRVREMMAIRGIKKD 505
+ EG++ + M I+ +
Sbjct: 458 VQEGLRCFKRMTEFYKIEAE 477
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 232/497 (46%), Gaps = 59/497 (11%)
Query: 67 SQLLHLCISRKSLEHGQKLHQHLLHSKGRVI----ENPTLKSKLITLYSVCGRLDEARRV 122
S LL LC ++L+H + H + S GR+ +N + L + S+ ++ V
Sbjct: 8 SYLLKLC---RTLKHLHQFHAQFITS-GRISNDFKQNSVFANVLFAITSISPSASASKEV 63
Query: 123 ---------FQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVA 173
F + + + + + LS + V +M RSV P F
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFV--EMRRRSVPPDFHTFPFV 121
Query: 174 LKACT--DVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR 231
KAC GD + + +H Q + +D N L+R Y L++F+ PQR
Sbjct: 122 FKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQR 181
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE---------------------------- 263
+VV++N LI G ++ + F +M L++
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 264 --GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
G+ + + + L CAQ GK IH + D L L+D YAKCG I
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
++F+ K L +WN M+ G +++G E +D F +M+ S I+PDG+TF+S+L GCS
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 382 HSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGS-- 438
HSGL E + F+ M+ Y V ++HY C+ D+LGR+G ++EA + MP K G+
Sbjct: 362 HSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMP-KDGGNRE 420
Query: 439 ---IWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVRE 495
W LL CR+ GN+ +AE AA R+ + P + G Y ++ +YA+A WE V +VRE
Sbjct: 421 KLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVRE 480
Query: 496 MM-AIRGIKKDAGCSWI 511
++ + +KK+ G S +
Sbjct: 481 IIDRDKKVKKNVGFSKV 497
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 213/410 (51%), Gaps = 12/410 (2%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
+ + Y C L AR+VF + E S W A+ + Y ++ +EA ++ M R++
Sbjct: 149 TSFVDFYGKCKDLFSARKVFGEMPERNAVS-WTALVVAYVKSGELEEAKSMFDLMPERNL 207
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR 223
N +K+ GD + + ++ KRD + +++ Y + G
Sbjct: 208 GSWNALVDGLVKS----GDLVNAKKLFDEMPKRD----IISYTSMIDGYAKGGDMVSARD 259
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLT 283
+FE +V +W+ LI G++ G+ E F M K +I + ++ C+Q+
Sbjct: 260 LFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFI-MVGLMSACSQMG 318
Query: 284 ALHSGKEIHGQI-VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTML 342
+++ + + K + ++ AL+DM AKCG + K+F+ M +DL S+ +M+
Sbjct: 319 CFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMM 378
Query: 343 AGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGV 401
G +I+G +AI LF++M+ I PD + F +L C S L EG ++F LM + Y +
Sbjct: 379 EGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSI 438
Query: 402 QPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAE 461
S +HY+C+V++L R+GKL EA + ++MP + S WGSLL C L GN +AE A
Sbjct: 439 LASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVAR 498
Query: 462 RLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWI 511
LFE+EP +AG+YV+LSNIYA W V +R+ M GI K G SWI
Sbjct: 499 HLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 157/341 (46%), Gaps = 22/341 (6%)
Query: 130 PPESVWVAMAIGYSRNRLSKEAL-LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRA 188
P +W + GYS L E + ++ R M P + F + +K C++ G RVG +
Sbjct: 72 PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSS 131
Query: 189 IHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGK 248
+H + + + D VV + + FY +C +VF MP+RN VSW L+ + G+
Sbjct: 132 VHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGE 191
Query: 249 VFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLN 308
+ E F M + +G SW L L L + K++ ++ K D
Sbjct: 192 LEEAKSMFDLMP-ERNLG-SWNALVDGLVKSGDLV---NAKKLFDEM----PKRDIISYT 242
Query: 309 ALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRP 368
+++D YAK G + + +F+ D+ +W+ ++ GY+ NGQ +A +F EM N++P
Sbjct: 243 SMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKP 302
Query: 369 DGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYA--CLVDILGRSGKLDEALT 426
D V L+S CS G +K + + + S HY L+D+ + G +D A
Sbjct: 303 DEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-SHYVVPALIDMNAKCGHMDRAAK 361
Query: 427 VARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAE--RLFE 465
+ MP + L++ C + +++ +E RLFE
Sbjct: 362 LFEEMPQR-------DLVSYCSMMEGMAIHGCGSEAIRLFE 395
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 228/485 (47%), Gaps = 43/485 (8%)
Query: 60 PYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEA 119
P ++ +L C +++ G+ +H L K + +++ L+ LYS G ++ A
Sbjct: 101 PPSSHAVTSVLRACGKMENMVDGKPIHAQAL--KNGLCGCVYVQTGLVGLYSRLGYIELA 158
Query: 120 RRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTD 179
++ F D E S W ++ GY + EA V+ + + N S K
Sbjct: 159 KKAFDDIAEKNTVS-WNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKK--- 214
Query: 180 VGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTL 239
GD ++ + + + + N L+ YV C F+ MPQ+N VSW T+
Sbjct: 215 -GDMGNACSLFSAMPLKSPAS----WNILIGGYVNCREMKLARTYFDAMPQKNGVSWITM 269
Query: 240 IAGFSGQGKVFETLDAFRAMQLKEGMGFSW------------------------------ 269
I+G++ G V + FR M K+ + +
Sbjct: 270 ISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 329
Query: 270 --ITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF 327
ITL++V+ +QL G + I + G K D L +L+D+Y K G K+F
Sbjct: 330 DEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMF 389
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
+ KD S++ M+ G ING +A LF MI I P+ +TF LLS SHSGL
Sbjct: 390 SNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQ 449
Query: 388 EGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC 447
EG K FN M+D+ ++PS +HY +VD+LGR+G+L+EA + ++MPM+ + +WG+LL +
Sbjct: 450 EGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLAS 509
Query: 448 RLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAG 507
L NV E A ++E + G L+ IY+ G W+ + VR+ + + + K G
Sbjct: 510 GLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLG 569
Query: 508 CSWIQ 512
CSW++
Sbjct: 570 CSWVE 574
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 201/462 (43%), Gaps = 34/462 (7%)
Query: 63 DEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGR--LDEAR 120
D + L C+ LE +++H L+ ++ +E P L + + R + +
Sbjct: 3 DSKLRFFLQRCVV---LEQAKQVHAQLVVNRYNHLE-PILVHQTLHFTKEFSRNIVTYVK 58
Query: 121 RVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDV 180
R+ + S W + S++R KE + VY DM + P + A + L+AC +
Sbjct: 59 RILKGFNGHDSFS-WGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM 117
Query: 181 GDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLI 240
+ G+ IHAQ K V L+ Y G + F+ + ++N VSWN+L+
Sbjct: 118 ENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLL 177
Query: 241 AGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLP-----ICAQLTALHSGKEIHGQI 295
G+ G++ E F + K+ + ++ I + C+ +A+ I
Sbjct: 178 HGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI 237
Query: 296 VKSGK------KADRPLLNA-----------LMDMYAKCGSIGYCKKVFDGMESKDLTSW 338
+ G K R +A ++ Y K G + +++F M KD +
Sbjct: 238 LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVY 297
Query: 339 NTMLAGYSINGQIEKAIDLFDEMIRSN--IRPDGITFVSLLSGCSHSGLTSEGQKFFNLM 396
+ M+A Y+ NG+ + A+ LF +M+ N I+PD IT S++S S G TS G + +
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
Query: 397 QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
++G++ L+D+ + G +A + N+ K + S + +++ C ++G + A
Sbjct: 358 TEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS-YSAMIMGCGINGMATEA 416
Query: 457 ETAAERLFEIE-PNNAGNYVMLSNIYADAGM-WEGVKRVREM 496
+ + E + P N + L + Y+ +G+ EG K M
Sbjct: 417 NSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM 458
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 213/410 (51%), Gaps = 4/410 (0%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV 163
S ++ YS G + EA ++F DP ++W M +GY + + ++ M R
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH 203
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR 223
+P + D V ++HA K + ++ V AL+ Y C C
Sbjct: 204 QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACS 263
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLT 283
VF + + ++V+ ++LI G+S G E L F +++ G + + VL CA+L+
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMS-GKKPDCVLVAIVLGSCAELS 322
Query: 284 ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLA 343
SGKE+H +++ G + D + +AL+DMY+KCG + +F G+ K++ S+N+++
Sbjct: 323 DSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLIL 382
Query: 344 GYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ-DYGVQ 402
G ++G A + F E++ + PD ITF +LL C HSGL ++GQ+ F M+ ++G++
Sbjct: 383 GLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIE 442
Query: 403 PSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAER 462
P EHY +V ++G +GKL+EA ++ + I G+LL+ C + N LAE AE
Sbjct: 443 PQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAEN 502
Query: 463 LFEIEPNNAGNY-VMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWI 511
+ + Y VMLSN+YA G W+ V+R+R+ ++ K G SW
Sbjct: 503 IHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISWF 552
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 180/396 (45%), Gaps = 32/396 (8%)
Query: 83 QKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAI 140
QKLH + +K ++ +P ++L Y++ L AR++F + P SV W ++
Sbjct: 25 QKLHSFV--TKSKLARDPYFATQLARFYALNDDLISARKLF---DVFPERSVFLWNSIIR 79
Query: 141 GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEA 200
Y++ L ++ +L P NF ++ + ++ D++ R IH
Sbjct: 80 AYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGF 139
Query: 201 DQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQ 260
DQ+ +A+++ Y + G + ++F +P ++ WN +I G+ G + ++ F MQ
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQ 199
Query: 261 LKEGMGFSWITLTTVLPICAQLTALHSGK----------EIHGQIVKSGKKADRPLLNAL 310
+ P C + AL SG +H +K + + AL
Sbjct: 200 HRGHQ-----------PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCAL 248
Query: 311 MDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDG 370
++MY++C I VF+ + DL + ++++ GYS G ++A+ LF E+ S +PD
Sbjct: 249 VNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDC 308
Query: 371 ITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARN 430
+ +L C+ + G++ + + G++ ++ + L+D+ + G L A+++
Sbjct: 309 VLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAG 368
Query: 431 MPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEI 466
+P K S + SL+ L G A TA E+ EI
Sbjct: 369 IPEKNIVS-FNSLILGLGLHG---FASTAFEKFTEI 400
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 231/447 (51%), Gaps = 15/447 (3%)
Query: 71 HLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDP 130
LC+S G+ LH L S V + L++ LI Y VCG++ +AR+VF + +
Sbjct: 138 ELCVS-----IGEGLHGIALRSGFMVFTD--LRNALIHFYCVCGKISDARKVFDEMPQSV 190
Query: 131 PESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIH 190
+ + GY + AL ++R M V L A +D+GD + H
Sbjct: 191 DAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAH 250
Query: 191 AQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVF 250
K + D + AL+ Y + G R+F+ +++VV+WN +I ++ G +
Sbjct: 251 VLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLE 310
Query: 251 ETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNAL 310
E + R M+ E M + T +L CA A G+ + + + D L AL
Sbjct: 311 ECVWLLRQMKY-EKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTAL 369
Query: 311 MDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN--IRP 368
+DMYAK G + ++F+ M+ KD+ SW M++GY +G +A+ LF++M N +RP
Sbjct: 370 VDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRP 429
Query: 369 DGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTV 427
+ ITF+ +L+ CSH GL EG + F M + Y P +EHY C+VD+LGR+G+L+EA +
Sbjct: 430 NEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYEL 489
Query: 428 ARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMW 487
RN+P+ + W +LL +CR+ GN L E+ RL E+ + + ++L+ +A AG
Sbjct: 490 IRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNP 549
Query: 488 EGVKRVREMMAIRGIKKDAGCSWIQIK 514
E K + + +G +K+AG S I+I+
Sbjct: 550 E--KSLDNELN-KG-RKEAGYSAIEIE 572
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 172/365 (47%), Gaps = 7/365 (1%)
Query: 138 MAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD 197
M GYS + + A V+ + A+ + F+F LK+C+ +G +H +
Sbjct: 96 MIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSG 155
Query: 198 EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR-NVVSWNTLIAGFSGQGKVFETLDAF 256
+ NAL+ FY CG D +VF+ MPQ + V+++TL+ G+ K LD F
Sbjct: 156 FMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLF 215
Query: 257 RAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAK 316
R M+ K + + TL + L + L L + H +K G D L+ AL+ MY K
Sbjct: 216 RIMR-KSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGK 274
Query: 317 CGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
G I +++FD KD+ +WN M+ Y+ G +E+ + L +M ++P+ TFV L
Sbjct: 275 TGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGL 334
Query: 377 LSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLS 436
LS C++S G+ +L+++ + LVD+ + G L++A+ + M K
Sbjct: 335 LSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDV 394
Query: 437 GSIWGSLLNSCRLDG----NVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKR 492
S W ++++ G V+L E ++ PN V+L+ + EG++
Sbjct: 395 KS-WTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRC 453
Query: 493 VREMM 497
+ M+
Sbjct: 454 FKRMV 458
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 156/372 (41%), Gaps = 53/372 (14%)
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL------RVFEV 227
L++C D + V R IH + K + D + LL F VL +FE
Sbjct: 35 LRSCRDTVE--VSR-IHGYMVKTGLDKDDFAVSKLLAF-------SSVLDIRYASSIFEH 84
Query: 228 MPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHS 287
+ N+ +NT+I G+S + F ++ K G+ + T L C++ +
Sbjct: 85 VSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAK-GLTLDRFSFITTLKSCSRELCVSI 143
Query: 288 GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM-ESKDLTSWNTMLAGYS 346
G+ +HG ++SG L NAL+ Y CG I +KVFD M +S D +++T++ GY
Sbjct: 144 GEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYL 203
Query: 347 INGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG----------------CSHSGLTSEGQ 390
+ A+DLF M +S + + T +S LS C GL +
Sbjct: 204 QVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLH 263
Query: 391 KFFNLMQDYG---------------VQPSLEHYACLVDILGRSGKLDEALTVARNM---P 432
L+ YG ++ + + C++D ++G L+E + + R M
Sbjct: 264 LITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEK 323
Query: 433 MKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIE-PNNAGNYVMLSNIYADAGMWEGVK 491
MK + S + LL+SC + T A+ L E +A L ++YA G+ E
Sbjct: 324 MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAV 383
Query: 492 RVREMMAIRGIK 503
+ M + +K
Sbjct: 384 EIFNRMKDKDVK 395
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 183/371 (49%), Gaps = 13/371 (3%)
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME 331
L + IC + L K +HG+I S D + L++MY+ CG VF+ M
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
K+L +W ++ ++ NG E AID+F PDG F + C G EG
Sbjct: 317 EKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLL 376
Query: 392 FFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLD 450
F M +DYG+ PS+E Y LV++ G LDEAL MPM+ + +W +L+N R+
Sbjct: 377 HFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVH 436
Query: 451 GNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSW 510
GN+ L + AE + ++P I A E +KK +G
Sbjct: 437 GNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEK----------ESLKKRSGI-L 485
Query: 511 IQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWV 570
+K + F AG ++ + E ++ L + + GY+ T + LHDI++E K +
Sbjct: 486 HGVKSSMQEFRAG-DTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLL 544
Query: 571 CGHSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHF 630
GHSER+A A++++ P + KNLRVCVDCH+ +K +S + R ++ RD RFH
Sbjct: 545 LGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQM 604
Query: 631 ENGTCSCMDHW 641
+NG C+C D+W
Sbjct: 605 KNGACTCKDYW 615
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 140/344 (40%), Gaps = 59/344 (17%)
Query: 39 SLCKSGKLEEALRLIESPNPTPYQDEDISQLLHL---CISRKSLEHGQKLHQHLLHSKGR 95
+ CK GK+++AL I+ Y D+S+LL L C + L+ + +H + S
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYV-VDLSRLLRLAKICGEAEGLQEAKTVHGKISAS--- 283
Query: 96 VIENPTLKSK--LITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALL 153
+ + L S L+ +YS CG +EA VF+ E E+ W + +++N ++A+
Sbjct: 284 -VSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLET-WCIIIRCFAKNGFGEDAI- 340
Query: 154 VYRDMLARSVEPGNFA----FSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNN--A 207
DM +R E GN F AC +GD G +H + RD + + +
Sbjct: 341 ---DMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYVS 396
Query: 208 LLRFYVECGCSGDVLRVFEVMP-QRNVVSWNTLIAGFSGQG---------KVFETLDAFR 257
L+ Y G + L E MP + NV W TL+ G +V E LD R
Sbjct: 397 LVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTR 456
Query: 258 -AMQLKEGMGFSWITLTTVLPICAQLTALHSGKE----IHGQIVKSGKKADRP------- 305
Q +EG +P+ A S K+ +HG VKS + R
Sbjct: 457 LNKQSREGF----------IPVKASDVEKESLKKRSGILHG--VKSSMQEFRAGDTNLPE 504
Query: 306 ---LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYS 346
L L ++ +GY + + D S T+L G+S
Sbjct: 505 NDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHS 548
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/556 (27%), Positives = 264/556 (47%), Gaps = 78/556 (14%)
Query: 35 PTLKSLCKSGKLEEALRLI---ESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLH 91
P L G L A+ LI E P+ +P + LL + + + ++LH ++
Sbjct: 29 PALARFGSIGVLRAAVELINDGEKPDASP-----LVHLLRVSGNYGYVSLCRQLHGYV-- 81
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
+K + N L + L+ Y L++A +VF DE DP W ++ GY ++ +E
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVF-DEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD-EEADQVVNNALLR 210
+ ++ ++ V P F+F+ AL AC + S +G IH++L K E+ + VV N L+
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 211 FYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKV------------------FET 252
Y +CG D + VF+ M +++ VSWN ++A S GK+ E
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNEL 260
Query: 253 LDAF-------RAMQLKEGM----GFSWITLTTVLPICAQ-------LTALHS------- 287
+DAF A Q+ M SW T+ T + T +HS
Sbjct: 261 IDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDE 320
Query: 288 ------------------GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDG 329
G IH K G + + +AL+DMY+KCG + + + +F
Sbjct: 321 YSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWT 380
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN-IRPDGITFVSLLSGCSHSGLTSE 388
M K+L WN M++GY+ NG +AI LF+++ + ++PD TF++LL+ CSH + E
Sbjct: 381 MPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPME 440
Query: 389 GQ-KFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNS 446
+F +M +Y ++PS+EH L+ +G+ G++ +A V + G W +LL +
Sbjct: 441 VMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGA 500
Query: 447 CRLDGNVSLAETAAERLFEIEPNNAGN--YVMLSNIYADAGMWEGVKRVREMMAIRGIKK 504
C ++ A+T A ++ E+ + Y+++SN+YA W V ++R++M G+ K
Sbjct: 501 CSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLK 560
Query: 505 DAGCSWIQIKQRIHTF 520
+ G SWI + + ++
Sbjct: 561 EVGSSWIDSRTKCSSY 576
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 117/225 (52%), Gaps = 8/225 (3%)
Query: 235 SWNTLIAGFSGQGKVFETLDAFRAMQ--LKEGMGFSWITLTTVLPICAQLTALHSGKEIH 292
SW+T++ + F ++ RA + +G L +L + + +++H
Sbjct: 23 SWSTIVPALAR----FGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 293 GQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIE 352
G + K G ++ L N+LM Y S+ KVFD M D+ SWN++++GY +G+ +
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 353 KAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQP-SLEHYACL 411
+ I LF E+ RS++ P+ +F + L+ C+ L+ G + + G++ ++ CL
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 412 VDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
+D+ G+ G +D+A+ V ++M K + S W +++ SC +G + L
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVS-WNAIVASCSRNGKLELG 242
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 183/344 (53%), Gaps = 6/344 (1%)
Query: 173 ALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRN 232
+ A ++G GR H K E D + N L+ Y C ++VF ++ N
Sbjct: 587 TISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPN 646
Query: 233 VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIH 292
+ SWN +I+ S E FR ++L+ + IT +L QL + G + H
Sbjct: 647 LCSWNCVISALSQNKAGREVFQLFRNLKLEP----NEITFVGLLSASTQLGSTSYGMQAH 702
Query: 293 GQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIE 352
+++ G +A+ + AL+DMY+ CG + KVF +++WN++++ + +G E
Sbjct: 703 CHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGE 762
Query: 353 KAIDLFDEMI-RSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYAC 410
KA++LF E+ S + P+ +F+SLLS CSHSG EG ++ M++ +GV+P EH
Sbjct: 763 KAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVW 822
Query: 411 LVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNN 470
+VD+LGR+GKL EA + +WG+LL++C G+ L + AE LFE+EP+N
Sbjct: 823 IVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDN 882
Query: 471 AGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIK 514
A Y+ L+N Y G WE R+R+M+ +KK G S I ++
Sbjct: 883 ASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 215/486 (44%), Gaps = 48/486 (9%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHL---CISRKSLEHGQKLHQHL- 89
N L +G EEA ++ DI+ ++ + C G+ +H +
Sbjct: 361 NAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTV 420
Query: 90 -LHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLS 148
+ + R +E + + +I +Y CG +A +F+ S W +M +S+N +
Sbjct: 421 RMEMQSRALE---VINSVIDMYGKCGLTTQAELLFKTTTHRDLVS-WNSMISAFSQNGFT 476
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACT--DVGDSRV-GRAIHAQLAKRDEEADQVVN 205
+A +++++++ F+ S L T D DS + G+++H L K + +
Sbjct: 477 HKAKNLFKEVVSE-YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGD-----LT 530
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQ-RNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEG 264
+A LR E M + R++ SWN++I+G + G E+L AF+AM +
Sbjct: 531 SAFLRL--------------ETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGK 576
Query: 265 MGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
+ ITL + L + G+ HG +KS ++ D L N L+ MY +C I
Sbjct: 577 IRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAV 636
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
KVF + +L SWN +++ S N + LF + + P+ ITFV LLS + G
Sbjct: 637 KVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLG 693
Query: 385 LTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
TS G + + G Q + A LVD+ G L+ + V RN + S S W S++
Sbjct: 694 STSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVN-SISAWNSVI 752
Query: 445 NSCRLDGNVSLAETAAERLF-------EIEPNNAGNYVMLSNIYADAGMWEGVKRVREMM 497
++ G + E A E LF E+EPN + +LS + EG+ ++M
Sbjct: 753 SAHGFHG---MGEKAME-LFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQME 808
Query: 498 AIRGIK 503
G+K
Sbjct: 809 EKFGVK 814
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 148/318 (46%), Gaps = 6/318 (1%)
Query: 88 HLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRL 147
H L + ++ + +L + L+ LY+ L A VF E S W + N
Sbjct: 211 HCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVS-WNTIMTKCLANGH 269
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKR--DEEADQVVN 205
+++L ++ M E FS + AC+ + + +G ++H + K EA V
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
N+++ Y +CG + VFE + R+V+S N ++ GF+ G E MQ + +
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 266 GFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADR-PLLNALMDMYAKCGSIGYCK 324
T+ ++ IC L+ G+ +HG V+ ++ ++N+++DMY KCG +
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAE 449
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR--SNIRPDGITFVSLLSGCSH 382
+F +DL SWN+M++ +S NG KA +LF E++ S + T +++L+ C
Sbjct: 450 LLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDS 509
Query: 383 SGLTSEGQKFFNLMQDYG 400
S G+ +Q G
Sbjct: 510 SDSLIFGKSVHCWLQKLG 527
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 163/341 (47%), Gaps = 6/341 (1%)
Query: 88 HLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRL 147
H K ++++ SKL+T Y G L + +F DE ++ VW +M ++N
Sbjct: 110 HCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLF-DELKEKDVIVWNSMITALNQNGR 168
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNA 207
A+ ++ +M+ + E + +A A + + SR +H + D + NA
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228
Query: 208 LLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
L+ Y + VF M R++VSWNT++ G ++L F++M G
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT-GSGQEA 287
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSG--KKADRPLLNALMDMYAKCGSIGYCKK 325
+T + V+ C+ + L G+ +HG ++KSG +A + N+++ MY+KCG +
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAET 347
Query: 326 VFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN-IRPDGITFVSLLSGCSHSG 384
VF+ + +D+ S N +L G++ NG E+A + ++M + I+PD T VS+ S C
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 385 LTSEGQKFFNLMQDYGVQP-SLEHYACLVDILGRSGKLDEA 424
+ EG+ +Q +LE ++D+ G+ G +A
Sbjct: 408 FSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 7/225 (3%)
Query: 182 DSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR---VFEVMPQRNVVSWNT 238
++ R++H K D ++ LL FY G +G+++ +F+ + +++V+ WN+
Sbjct: 102 ETETPRSVHCFALKCGLLQDLATSSKLLTFY---GRTGELVSSSCLFDELKEKDVIVWNS 158
Query: 239 LIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKS 298
+I + G+ + F M + +G F TL + L +H +++
Sbjct: 159 MITALNQNGRYIAAVGLFIEM-IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIET 217
Query: 299 GKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLF 358
G D L NALM++YAK ++ + VF ME +D+ SWNT++ NG K++ F
Sbjct: 218 GLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYF 277
Query: 359 DEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQP 403
M S D +TF ++S CS + G+ L+ G P
Sbjct: 278 KSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSP 322
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 232/455 (50%), Gaps = 37/455 (8%)
Query: 89 LLHS---KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRN 145
LLHS K V + + S LI++Y CG + AR+VF DE + + W AM GY N
Sbjct: 67 LLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVF-DEMPERNVATWNAMIGGYMSN 125
Query: 146 RLSK------EALLVYRDMLA-----------RSVEPGNFAFSVALKACTDVGDSRVGRA 188
+ E + V R+ + +E F +V V
Sbjct: 126 GDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLG 185
Query: 189 IHAQLAKRDE---------EADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTL 239
++ K ++ E + V + ++ Y G + +F + R++V WNTL
Sbjct: 186 VYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTL 245
Query: 240 IAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSG 299
IAG++ G + +DAF MQ EG +T++++L CAQ L G+E+H I G
Sbjct: 246 IAGYAQNGYSDDAIDAFFNMQ-GEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG 304
Query: 300 KKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFD 359
+ ++ + NAL+DMYAKCG + VF+ + + + N+M++ +I+G+ ++A+++F
Sbjct: 305 IELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFS 364
Query: 360 EMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSG 419
M +++PD ITF+++L+ C H G EG K F+ M+ V+P+++H+ CL+ +LGRSG
Sbjct: 365 TMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSG 424
Query: 420 KLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNY----- 474
KL EA + + M +K + ++ G+LL +C++ + +AE ++ E + +Y
Sbjct: 425 KLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVM-KIIETAGSITNSYSENHL 483
Query: 475 VMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCS 509
+SN+YA W+ + +R M RG++K G S
Sbjct: 484 ASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 185/387 (47%), Gaps = 38/387 (9%)
Query: 144 RNRLSK----EALLVYRDMLARSVE-PGNFAFSVALKACTDVGDSRV-GRAIHAQLAKRD 197
+N +S+ +AL++Y + R V PG + L+AC V V G+ +H++ K
Sbjct: 19 KNHISRGSPIQALVLYGGIRRRGVYFPG--WVPLILRACACVVPRVVLGKLLHSESIKFG 76
Query: 198 EEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGK------VFE 251
+D +V ++L+ Y +CGC +VF+ MP+RNV +WN +I G+ G +FE
Sbjct: 77 VCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFE 136
Query: 252 TLDAFRA----MQLKEGMGFSWITLTTVLPICAQLT---------ALHSGKEIHGQIVKS 298
+ R +++ +G G I + + ++ ++ G ++ + ++
Sbjct: 137 EISVCRNTVTWIEMIKGYG-KRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMED 195
Query: 299 GKK--ADRPLLNA-----LMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQI 351
+K D P NA +M Y + G + + +F + ++DL WNT++AGY+ NG
Sbjct: 196 ARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYS 255
Query: 352 EKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACL 411
+ AID F M PD +T S+LS C+ SG G++ +L+ G++ + L
Sbjct: 256 DDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNAL 315
Query: 412 VDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRL--DGNVSLAETAAERLFEIEPN 469
+D+ + G L+ A +V ++ ++ S + S+++ + G +L + +++P+
Sbjct: 316 IDMYAKCGDLENATSVFESISVR-SVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPD 374
Query: 470 NAGNYVMLSNIYADAGMWEGVKRVREM 496
+L+ + EG+K EM
Sbjct: 375 EITFIAVLTACVHGGFLMEGLKIFSEM 401
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 134/300 (44%), Gaps = 14/300 (4%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPYQDEDI---SQLLHLCISRKSLEHGQKLHQHLLHSK 93
+K K ++E+A L E P++ +++ S +L + ++ + +E +K + +
Sbjct: 151 IKGYGKRIEIEKARELFER---MPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPE-- 205
Query: 94 GRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALL 153
+N + S +++ Y G + EAR +F +W + GY++N S +A+
Sbjct: 206 ----KNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDL-VIWNTLIAGYAQNGYSDDAID 260
Query: 154 VYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYV 213
+ +M EP S L AC G VGR +H+ + R E +Q V+NAL+ Y
Sbjct: 261 AFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 320
Query: 214 ECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLT 273
+CG + VFE + R+V N++I+ + GK E L+ F M+ + + IT
Sbjct: 321 KCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLD-LKPDEITFI 379
Query: 274 TVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK 333
VL C L G +I ++ K + L+ + + G + ++ M K
Sbjct: 380 AVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 114/230 (49%), Gaps = 11/230 (4%)
Query: 237 NTLIAGFSGQGKVFETLDAFRAMQLKEGMGF-SWITLTTVLPICAQLTA-LHSGKEIHGQ 294
+ LI +G + L + ++ + G+ F W+ L +L CA + + GK +H +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIR-RRGVYFPGWVPL--ILRACACVVPRVVLGKLLHSE 71
Query: 295 IVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKA 354
+K G +D + ++L+ MY KCG + +KVFD M +++ +WN M+ GY NG A
Sbjct: 72 SIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLA 131
Query: 355 IDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDI 414
LF+E+ ++ + +T++ ++ G + ++ F M +++ ++ ++ +
Sbjct: 132 SGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFE--LKNVKAWSVMLGV 186
Query: 415 LGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLF 464
+ K+++A ++P K + +W +++ G+V A R+F
Sbjct: 187 YVNNRKMEDARKFFEDIPEK-NAFVWSLMMSGYFRIGDVHEARAIFYRVF 235
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 141/496 (28%), Positives = 242/496 (48%), Gaps = 25/496 (5%)
Query: 34 NPTLKSLCKSGKLEEALRLIE----------SPNPTPYQDEDISQLLHLCISRKSLEHGQ 83
N L+ C++G E+ RL E + N Y ++ C + + G+
Sbjct: 182 NLLLRCFCQTG---ESKRLFEVYLRMELEGVAKNGLTY-----CYMIRGCSHDRLVYEGK 233
Query: 84 KLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYS 143
+LH ++ S G I N + + L+ YS CG L + R F E S W ++ +
Sbjct: 234 QLHSLVVKS-GWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVIS-WNSIVSVCA 291
Query: 144 RNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQV 203
++L ++ M P F L C+ D + G+ IH + K + +
Sbjct: 292 DYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSL 351
Query: 204 -VNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLK 262
V +AL+ Y +C + +++ +P N+ N+L+ G + ++ F + +
Sbjct: 352 HVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMF-GLMID 410
Query: 263 EGMGFSWITLTTVLPICAQLT--ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI 320
EG G +TL+TVL + +LHS +H +KSG AD + +L+D Y K G
Sbjct: 411 EGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQN 470
Query: 321 GYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGC 380
+KVFD +++ ++ +++ GY+ NG + + EM R N+ PD +T +S+LSGC
Sbjct: 471 EVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGC 530
Query: 381 SHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSI 439
SHSGL EG+ F+ ++ YG+ P + YAC+VD+LGR+G +++A +
Sbjct: 531 SHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVA 590
Query: 440 WGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAI 499
W SLL SCR+ N ++ AAE L +EP N Y+ +S Y + G +E +++RE+ A
Sbjct: 591 WSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAAS 650
Query: 500 RGIKKDAGCSWIQIKQ 515
R + ++ G S + +K
Sbjct: 651 RELMREIGYSSVVVKN 666
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 147/321 (45%), Gaps = 4/321 (1%)
Query: 114 GRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVA 173
G L A F DE + + G SR S A+ +Y +M++ + F
Sbjct: 60 GNLLSAHEAF-DEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSV 118
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNV 233
L C+D R G +H ++ + V +AL+ Y L++F+ M RN+
Sbjct: 119 LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNL 178
Query: 234 VSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHG 293
N L+ F G+ + + M+L EG+ + +T ++ C+ ++ GK++H
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMEL-EGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 294 QIVKSGKKADRPLL-NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIE 352
+VKSG + N L+D Y+ CG + + F+ + KD+ SWN++++ + G +
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVL 297
Query: 353 KAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHY-ACL 411
++DLF +M RP F+S L+ CS + G++ + G S H + L
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSAL 357
Query: 412 VDILGRSGKLDEALTVARNMP 432
+D+ G+ ++ + + +++P
Sbjct: 358 IDMYGKCNGIENSALLYQSLP 378
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 165/386 (42%), Gaps = 42/386 (10%)
Query: 218 SGDVL---RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
SG++L F+ M R+VV++N LI+G S G ++ + M + G+ S T +
Sbjct: 59 SGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEM-VSCGLRESASTFPS 117
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKD 334
VL +C+ G ++H +++ G + + +AL+ +YA + K+FD M ++
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 335 LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFN 394
L N +L + G+ ++ +++ M + +G+T+ ++ GCSH L EG++ +
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 395 LMQDYGVQPSLEHYA-CLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNV 453
L+ G S A LVD G L ++ +P K S W S+++ C
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVIS-WNSIVSVCA----- 291
Query: 454 SLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQI 513
+ G+ + ++++ W +R M+ S IQ
Sbjct: 292 ----------------DYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRN--SDIQS 333
Query: 514 KQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDI--------NEEM 565
++IH +V D S L + +AL + I N+ ++ + N M
Sbjct: 334 GKQIHCYVLKMGFDVSS----LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLM 389
Query: 566 KVMWVCGHSERLAAVFAL-IHTGAGM 590
+ CG ++ + +F L I G G+
Sbjct: 390 TSLMHCGITKDIIEMFGLMIDEGTGI 415
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 194/392 (49%), Gaps = 36/392 (9%)
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
K +L ++ MLA V+P N F +KA G A+H Q KR D V +
Sbjct: 68 KTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSF 127
Query: 209 LRFYVE----------------------------CGCSGDV---LRVFEVMPQRNVVSWN 237
+RFY E CG +G++ F+ MP +VVSW
Sbjct: 128 VRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWT 187
Query: 238 TLIAGFSGQGKVFETLDAFRAMQLKEGMGFS--WITLTTVLPICAQLT--ALHSGKEIHG 293
T+I GFS +G + L F M E + T +VL CA + GK+IHG
Sbjct: 188 TVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHG 247
Query: 294 QIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEK 353
++ L AL+DMY K G + +FD + K + +WN +++ + NG+ ++
Sbjct: 248 YVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQ 307
Query: 354 AIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG-QKFFNLMQDYGVQPSLEHYACLV 412
A+++F+ M S + P+GIT +++L+ C+ S L G Q F ++ +Y + P+ EHY C+V
Sbjct: 308 ALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVV 367
Query: 413 DILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAG 472
D++GR+G L +A +++P + S+ G+LL +C++ N L T ++L ++P + G
Sbjct: 368 DLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCG 427
Query: 473 NYVMLSNIYADAGMWEGVKRVREMMAIRGIKK 504
YV LS A W +++R+ M GI+K
Sbjct: 428 QYVALSTFNALDSNWSEAEKMRKAMIEAGIRK 459
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 14/235 (5%)
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVM----PQRNVVSWNTLIAGFSGQGKVFETLDAFR 257
+ V N L+R Y+ G L +F M Q N +++ +LI V + A
Sbjct: 51 KCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGV-ALH 109
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
LK G + T+ + ++ L S +++ I+ A N+L+D +
Sbjct: 110 GQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVA----CNSLLDACGRN 165
Query: 318 GSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMI---RSNIRPDGITFV 374
G + Y + F M D+ SW T++ G+S G KA+ +F EMI R+ I P+ TFV
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV 225
Query: 375 SLLSGCSH--SGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTV 427
S+LS C++ G G++ + + + L+D+ G++G L+ ALT+
Sbjct: 226 SVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTI 280
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 126/304 (41%), Gaps = 40/304 (13%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQHLLH 91
N ++S +G+ + +L L + Q +++ L+ S S+ +G LH L
Sbjct: 55 NTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL- 113
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD-------------------EEED--- 129
K + +P +++ + Y G L+ +R++F D E D
Sbjct: 114 -KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 130 ------PPESV--WVAMAIGYSRNRLSKEALLVYRDMLARS---VEPGNFAFSVALKACT 178
P V W + G+S+ L +AL+V+ +M+ + P F L +C
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 179 --DVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSW 236
D G R+G+ IH + ++ + ALL Y + G L +F+ + + V +W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 237 NTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIV 296
N +I+ + G+ + L+ F M+ + + ITL +L CA+ + G ++ I
Sbjct: 293 NAIISALASNGRPKQALEMFEMMK-SSYVHPNGITLLAILTACARSKLVDLGIQLFSSIC 351
Query: 297 KSGK 300
K
Sbjct: 352 SEYK 355
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 175/318 (55%), Gaps = 5/318 (1%)
Query: 199 EADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRA 258
E + V N ++ G L E MP R VVSW T+I G++ K E + F
Sbjct: 186 ERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSR 245
Query: 259 MQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSG-KKADRPLLNALMDMYAKC 317
M + + + IT+ +LP L L +H + K G D + N+L+D YAKC
Sbjct: 246 MVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKC 305
Query: 318 GSIGYCKKVFDGMES--KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVS 375
G I K F + + K+L SW TM++ ++I+G ++A+ +F +M R ++P+ +T +S
Sbjct: 306 GCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMIS 365
Query: 376 LLSGCSHSGLTSEG-QKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPM 433
+L+ CSH GL E +FFN M +Y + P ++HY CLVD+L R G+L+EA +A +P+
Sbjct: 366 VLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPI 425
Query: 434 KLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRV 493
+ +W LL +C + + LAE +L E+E ++ G+YV++SNI+ G + +R
Sbjct: 426 EEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRF 485
Query: 494 REMMAIRGIKKDAGCSWI 511
R+ M +RG+ K G S +
Sbjct: 486 RKQMDVRGVAKLPGHSQV 503
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 99 NPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDM 158
NP + +IT + G ++A F ++ + W + GY+R KEA+L++ M
Sbjct: 188 NPVTWNVMITGLTNLGDFEKAL-CFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRM 246
Query: 159 LA-RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD-EEADQVVNNALLRFYVECG 216
+A +++P L A ++GD ++ ++HA + KR D V N+L+ Y +CG
Sbjct: 247 VACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCG 306
Query: 217 CSGDVLRVFEVMP--QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
C + F +P ++N+VSW T+I+ F+ G E + F+ M+ + G+ + +T+ +
Sbjct: 307 CIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDME-RLGLKPNRVTMIS 365
Query: 275 VLPICAQ 281
VL C+
Sbjct: 366 VLNACSH 372
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 213/449 (47%), Gaps = 53/449 (11%)
Query: 40 LCKSGKLEEALRLIE----------SPNPTPYQDE-DISQLLHLCISRKSLEHGQKLHQH 88
+C + K E L+ ++ SPN Y +S L+ L L G+++H
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQL------LSCGRQIHGM 341
Query: 89 LLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLS 148
L+ K L + LI Y+ CG L+++R F D D W A+ GY+ N+
Sbjct: 342 LI--KNGCETGIVLGNALIDFYAKCGNLEDSRLCF-DYIRDKNIVCWNALLSGYA-NKDG 397
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEE--------- 199
L ++ ML P + FS ALK+C V + + ++ ++ D +
Sbjct: 398 PICLSLFLQMLQMGFRPTEYTFSTALKSCC-VTELQQLHSVIVRMGYEDNDYVLSSLMRS 456
Query: 200 --ADQVVNNALLRF------------------YVECGCSGDVLRVFEVMPQRNVVSWNTL 239
+Q++N+ALL Y G + +++ + Q + VSWN
Sbjct: 457 YAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIA 516
Query: 240 IAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSG 299
IA S E ++ F+ M L+ + T ++L +C++L L G IHG I K+
Sbjct: 517 IAACSRSDYHEEVIELFKHM-LQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTD 575
Query: 300 KK-ADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLF 358
AD + N L+DMY KCGSI KVF+ K+L +W +++ I+G ++A++ F
Sbjct: 576 FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Query: 359 DEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRS 418
E + +PD ++F+S+L+ C H G+ EG F M+DYGV+P ++HY C VD+L R+
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARN 695
Query: 419 GKLDEALTVARNMPMKLSGSIWGSLLNSC 447
G L EA + R MP +W + L+ C
Sbjct: 696 GYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 172/401 (42%), Gaps = 61/401 (15%)
Query: 62 QDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARR 121
+D DIS+ LH ++K L+ ++ + LI+ Y CG A R
Sbjct: 229 KDLDISKQLHCSATKKGLDC-----------------EISVVNSLISAYGKCGNTHMAER 271
Query: 122 VFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVG 181
+FQD S W A+ +++ +AL ++ M P + L + V
Sbjct: 272 MFQDAGSWDIVS-WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQ 330
Query: 182 DSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIA 241
GR IH L K E V+ NAL+ FY +CG D F+ + +N+V WN L++
Sbjct: 331 LLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLS 390
Query: 242 GFSGQ-GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGK 300
G++ + G + L F M L+ G + T +T L C +T L +++H IV+ G
Sbjct: 391 GYANKDGPI--CLSLFLQM-LQMGFRPTEYTFSTALKSCC-VTEL---QQLHSVIVRMGY 443
Query: 301 KADRPLLNALMDMYAKC--------------------------------GSIGYCKKVFD 328
+ + +L++LM YAK G K+
Sbjct: 444 EDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLIS 503
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSE 388
+E D SWN +A S + E+ I+LF M++SNIRPD TFVS+LS CS +
Sbjct: 504 TLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTL 563
Query: 389 GQKFFNLMQDYGVQPSLEHYAC--LVDILGRSGKLDEALTV 427
G L+ + + + C L+D+ G+ G + + V
Sbjct: 564 GSSIHGLITKTDFSCA-DTFVCNVLIDMYGKCGSIRSVMKV 603
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 162/364 (44%), Gaps = 5/364 (1%)
Query: 62 QDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARR 121
++ + LL++C S + LH + +++ + + +I+LY G + A +
Sbjct: 11 HNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGK 70
Query: 122 VFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVG 181
VF D+ + + + + GYS+ +A V+ +M P S L +C +
Sbjct: 71 VF-DQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVS-GLLSCASL- 127
Query: 182 DSRVGRAIHAQLAKRDE-EADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLI 240
D R G +H K AD V LL Y +VFE MP +++ +WN ++
Sbjct: 128 DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMM 187
Query: 241 AGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGK 300
+ +G + E + FR + ++ G + + VL + + L K++H K G
Sbjct: 188 SLLGHRGFLKECMFFFREL-VRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGL 246
Query: 301 KADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDE 360
+ ++N+L+ Y KCG+ +++F S D+ SWN ++ + + KA+ LF
Sbjct: 247 DCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVS 306
Query: 361 MIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGK 420
M P+ T+VS+L S L S G++ ++ G + + L+D + G
Sbjct: 307 MPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGN 366
Query: 421 LDEA 424
L+++
Sbjct: 367 LEDS 370
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 6/177 (3%)
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL--NALMDMYAKCGSIGYCKKVFDG 329
+ ++L +C + + K +H + +P+ N ++ +Y K G + KVFD
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG 389
M ++ S+NT++ GYS G ++KA +F EM P+ T LLS S G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRAG 132
Query: 390 QKFFNLMQDYGVQPSLEHYA-CLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLN 445
+ L YG+ + CL+ + GR L+ A V +MP K S W +++
Sbjct: 133 TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK-SLETWNHMMS 188
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 180/345 (52%), Gaps = 17/345 (4%)
Query: 184 RVGRAIHAQLAKRDEEAD-QVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAG 242
RVGR +H + K + +++ LL FY + G +VF+ MP+R V+WN +I G
Sbjct: 128 RVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 243 F-----SGQGKVFETLDAFRAMQL-KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIV 296
+ G + + FR G+ + T+ VL +Q L G +HG I
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 297 KSG--KKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKA 354
K G + D + AL+DMY+KCG + VF+ M+ K++ +W +M G ++NG+ +
Sbjct: 248 KLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNET 307
Query: 355 IDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVD 413
+L + M S I+P+ ITF SLLS H GL EG + F M+ +GV P +EHY C+VD
Sbjct: 308 PNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVD 367
Query: 414 ILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAG- 472
+LG++G++ EA MP+K + SL N+C + G + E + L EIE +
Sbjct: 368 LLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKL 427
Query: 473 ------NYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWI 511
+YV LSN+ A G W V+++R+ M R IK G S++
Sbjct: 428 SGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 184/354 (51%), Gaps = 6/354 (1%)
Query: 77 KSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWV 136
K+L+ G+++H H+L SK V E P + S LI LY CG + RRVF ++ S W
Sbjct: 330 KALKLGKEVHAHVLKSKNYV-EQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAIS-WT 387
Query: 137 AMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKR 196
A+ GY+ N +AL M P + L C ++ + G+ IH K
Sbjct: 388 ALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKN 447
Query: 197 DEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAF 256
+ + +L+ Y +CG +R+F+ + QRNV +W +I + + ++ F
Sbjct: 448 LFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVF 507
Query: 257 RAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNA-LMDMYA 315
R M L + S +T+ VL +C+ L AL GKE+HG I+K ++ P ++A ++ MY
Sbjct: 508 RLMLLSKHRPDS-VTMGRVLTVCSDLKALKLGKELHGHILKKEFESI-PFVSARIIKMYG 565
Query: 316 KCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVS 375
KCG + FD + K +W ++ Y N AI+ F++M+ P+ TF +
Sbjct: 566 KCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTA 625
Query: 376 LLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILGRSGKLDEALTVA 428
+LS CS +G E +FFNLM + Y +QPS EHY+ ++++L R G+++EA +A
Sbjct: 626 VLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRLA 679
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 189/371 (50%), Gaps = 8/371 (2%)
Query: 26 HNHKPPPLNPTLKSLCKSGKLEEALRLIE--SPNPTPYQDEDISQLLHLCISRKSLEHGQ 83
H+ P ++ ++ + LE AL +++ P S LL C+ RKSL HG+
Sbjct: 72 HSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGK 131
Query: 84 KLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIG-- 141
++H H+ + N L++KL+ +Y+ CG + +A++VF DE W A+ G
Sbjct: 132 QVHVHI--RINGLESNEFLRTKLVHMYTACGSVKDAQKVF-DESTSSNVYSWNALLRGTV 188
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
S + ++ L + +M V+ ++ S K+ R G HA K
Sbjct: 189 ISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNS 248
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
+ +L+ Y +CG G RVF+ + +R++V W +IAG + + +E L FR M
Sbjct: 249 VFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMIS 308
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNA-LMDMYAKCGSI 320
+E + + + LTT+LP+ + AL GKE+H ++KS ++P +++ L+D+Y KCG +
Sbjct: 309 EEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDM 368
Query: 321 GYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGC 380
++VF G + ++ SW +++GY+ NG+ ++A+ M + RPD +T ++L C
Sbjct: 369 ASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVC 428
Query: 381 SHSGLTSEGQK 391
+ +G++
Sbjct: 429 AELRAIKQGKE 439
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 181/346 (52%), Gaps = 8/346 (2%)
Query: 83 QKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGY 142
Q L H L K + + LK+ L+ +Y CG++ ARRVF DE + VW AM G
Sbjct: 232 QGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVF-DEIVERDIVVWGAMIAGL 290
Query: 143 SRNRLSKEALLVYRDMLAR-SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
+ N+ EAL ++R M++ + P + + L DV ++G+ +HA + K +
Sbjct: 291 AHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVE 350
Query: 202 Q-VVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQ 260
Q V++ L+ Y +CG RVF QRN +SW L++G++ G+ + L + MQ
Sbjct: 351 QPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQ 410
Query: 261 LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI 320
+EG +T+ TVLP+CA+L A+ GKEIH +K+ + L+ +LM MY+KCG
Sbjct: 411 -QEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVP 469
Query: 321 GYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGC 380
Y ++FD +E +++ +W M+ Y N + I++F M+ S RPD +T +L+ C
Sbjct: 470 EYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVC 529
Query: 381 SHSGLTSEGQKFFN--LMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
S G++ L +++ P + A ++ + G+ G L A
Sbjct: 530 SDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSA 573
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
+ ++L +C K+L+ G++LH H+L + I P + +++I +Y CG L A F D
Sbjct: 522 MGRVLTVCSDLKALKLGKELHGHILKKEFESI--PFVSARIIKMYGKCGDLRSANFSF-D 578
Query: 126 EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVG 181
W A+ Y N L ++A+ + M++R P F F+ L C+ G
Sbjct: 579 AVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAG 634
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 206/429 (48%), Gaps = 35/429 (8%)
Query: 228 MPQRNVVSWNTLIAGFSG------------QGKVFETLDAFRAMQLKEGMGFSWITLTTV 275
+PQ N N SG +GKV + ++ ++ + EG L +
Sbjct: 129 VPQENNTGGNHFQQDHSGHSSLDELDSICREGKVKKAVEIIKSWR-NEGYVVDLPRLFWI 187
Query: 276 LPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDL 335
+C AL K +H I S +D N++++MY+ CGS+ VF+ M ++L
Sbjct: 188 AQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNL 247
Query: 336 TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNL 395
+W ++ ++ NGQ E AID F + +PDG F + C G +EG F
Sbjct: 248 ETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFES 307
Query: 396 M-QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVS 454
M ++YG+ P +EHY LV +L G LDEAL +M + +W +L+N R+ G++
Sbjct: 308 MYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPNVD--LWETLMNLSRVHGDLI 365
Query: 455 LAETAAERLFEIEPNNAGNYVMLSNIYADAGMW--EGVKRVREMMAIRGIKKDAGCSWIQ 512
L + + + +++ + N + AG+ + V+E + + G
Sbjct: 366 LGDRCQDMVEQLDASRL-------NKESKAGLVPVKSSDLVKEKLQRMAKGPNYG----- 413
Query: 513 IKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCG 572
I AG S + Y+ + +L + + GY+P + + LHD+++E K +
Sbjct: 414 ----IRYMAAGDISRPENRELYMAL-KSLKEHMIEIGYVPLSKLALHDVDQESKDENLFN 468
Query: 573 HSERLAAVFALIHTGAGMPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFEN 632
H+ER A + + T A IR+ KNLRVC DCH+ +K +S++ R ++ RD RFHH ++
Sbjct: 469 HNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKD 528
Query: 633 GTCSCMDHW 641
G CSC ++W
Sbjct: 529 GVCSCREYW 537
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPYQDEDISQLL---HLCISRKSLEHGQKLHQHLLHSK 93
L S+C+ GK+++A+ +I+S Y D+ +L LC ++L+ + +H+ + S
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYV-VDLPRLFWIAQLCGDAQALQEAKVVHEFITSSV 211
Query: 94 GRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALL 153
G I + + + +I +YS CG +++A VF E E+ W + +++N ++A+
Sbjct: 212 G--ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLET-WCGVIRCFAKNGQGEDAID 268
Query: 154 VYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNN--ALLRF 211
+ +P F AC +GD G +H + ++ + + +L++
Sbjct: 269 TFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLVKM 327
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLI 240
E G + LR E M + NV W TL+
Sbjct: 328 LAEPGYLDEALRFVESM-EPNVDLWETLM 355
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 223/446 (50%), Gaps = 6/446 (1%)
Query: 79 LEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAM 138
+ HG+++H + + S G N + + ++ +Y G D A VF E+ S W +
Sbjct: 149 VRHGEQIHGNAICS-GVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS-WNCL 206
Query: 139 AIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDE 198
+ S + + AL + M ++P + S+ + C+D+ + G+ A K
Sbjct: 207 ILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF 266
Query: 199 EADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRA 258
++ +V A + + +C D +++F + + + V N++I +S + L F
Sbjct: 267 LSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLF-I 325
Query: 259 MQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCG 318
+ + + + T ++VL L G ++H ++K G D + +LM+MY K G
Sbjct: 326 LAMTQSVRPDKFTFSSVLS-SMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTG 384
Query: 319 SIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMI-RSNIRPDGITFVSLL 377
S+ VF + KDL WNT++ G + N + +++ +F++++ +++PD +T + +L
Sbjct: 385 SVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGIL 444
Query: 378 SGCSHSGLTSEGQKFFNLMQD-YGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLS 436
C ++G +EG + F+ M+ +GV P EHYAC++++L R G ++EA +A +P + S
Sbjct: 445 VACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPS 504
Query: 437 GSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREM 496
IW +L + G+ LAET A+ + E EP ++ Y++L IY WE ++R
Sbjct: 505 SHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYA 564
Query: 497 MAIRGIKKDAGCSWIQIKQRIHTFVA 522
M +K G S I I+ + +F A
Sbjct: 565 MNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 122/250 (48%), Gaps = 6/250 (2%)
Query: 184 RVGRAIHA-QLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAG 242
+ G I+A QL + + + N L+ + G + L +F+ MP+R+VVSWNT+I+G
Sbjct: 51 KSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISG 110
Query: 243 FSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSG-KK 301
G + F MQ E T T + + +T + G++IHG + SG +
Sbjct: 111 LVSCGFHEYGIRVFFDMQRWEIRP----TEFTFSILASLVTCVRHGEQIHGNAICSGVSR 166
Query: 302 ADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM 361
+ + N++MDMY + G Y VF ME +D+ SWN ++ S +G E A+D F M
Sbjct: 167 YNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLM 226
Query: 362 IRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKL 421
I+PD T ++S CS S+G++ L G + +D+ + +L
Sbjct: 227 REMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRL 286
Query: 422 DEALTVARNM 431
D+++ + R +
Sbjct: 287 DDSVKLFREL 296
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 40/217 (18%)
Query: 288 GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSI 347
K +H Q++++G N + +Y K GS+ ++FD + K+ +WN L G
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 348 NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEH 407
NG + A+DLFDEM ++ +++ +++SG G G + F MQ + ++P+
Sbjct: 83 NGYLNNALDLFDEMPERDV----VSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFT 138
Query: 408 YACL---------------------------------VDILGRSGKLDEALTVARNMPMK 434
++ L +D+ R G D AL+V M +
Sbjct: 139 FSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 435 LSGSIWGSLLNSCRLDGN--VSLAETAAERLFEIEPN 469
S W L+ SC GN V+L + R EI+P+
Sbjct: 199 DVVS-WNCLILSCSDSGNKEVALDQFWLMREMEIQPD 234
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 205/408 (50%), Gaps = 25/408 (6%)
Query: 240 IAGFSGQGKVFETLDAFRAMQLKEGMGF--SWITLTTVLPICAQLTALHSGKEIHGQIVK 297
I F K + +A + + E G+ + L + +C ++ AL + +H I
Sbjct: 81 IETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITP 140
Query: 298 SGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDL 357
++ + +++MY+ C S VF+ M ++ +W TM+ + NG+ E+AID+
Sbjct: 141 LDARS----YHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDM 196
Query: 358 FDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYACLVDILG 416
F I +PD F ++ C G +EG F M +DYG+ S+E Y ++++L
Sbjct: 197 FTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLA 256
Query: 417 RSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPN---NAGN 473
G LDEAL M ++ S +W +L+N C + G + L + AE + +++ + N
Sbjct: 257 ACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESN 316
Query: 474 YVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAE 533
+++ +D+ M ++++E+ + I+ D K+R+H F AG +S + +
Sbjct: 317 AGLVAAKASDSAM----EKLKELRYCQMIRDDP-------KKRMHEFRAGDTSHLGTVSA 365
Query: 534 YLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIR 593
+ +L + D G++P T V + EE K + S +LA A+I++ A P+
Sbjct: 366 F----RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLT 421
Query: 594 ITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
+ +N+R C+D H+ K +S +T R ++ RD ++H ++NG CSC D+W
Sbjct: 422 VLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 202/434 (46%), Gaps = 38/434 (8%)
Query: 63 DEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRV 122
+ +S ++ C +LE G+ +H + K V+ + + + + +Y C RL+ ARRV
Sbjct: 263 NHTVSSVMLACSRSLALEVGKVIHA--IAVKLSVVADTVVSTSVFDMYVKCDRLESARRV 320
Query: 123 FQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSV------------------- 163
F D+ W + GY+ + L++EA ++ M R++
Sbjct: 321 F-DQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEA 379
Query: 164 ------------EPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
N L C+ + D ++G+ H + + + + +V NALL
Sbjct: 380 LDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDM 439
Query: 212 YVECGCSGDVLRVFEVMPQ-RNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWI 270
Y +CG F M + R+ VSWN L+ G + G+ + L F MQ++ S
Sbjct: 440 YGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKP--SKY 497
Query: 271 TLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM 330
TL T+L CA + AL+ GK IHG +++ G K D + A++DMY+KC Y +VF
Sbjct: 498 TLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEA 557
Query: 331 ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQ 390
++DL WN+++ G NG+ ++ +LF + ++PD +TF+ +L C G G
Sbjct: 558 ATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGF 617
Query: 391 KFFNLMQ-DYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRL 449
++F+ M Y + P +EHY C++++ + G L + MP + + ++C+
Sbjct: 618 QYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQR 677
Query: 450 DGNVSLAETAAERL 463
L AA+RL
Sbjct: 678 YRWSKLGAWAAKRL 691
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 168/346 (48%), Gaps = 10/346 (2%)
Query: 52 LIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYS 111
L SP P Y + +L C S+ + +K+ HL+ + L ++ I Y
Sbjct: 52 LFASPEPVSYWLYE--RLFRSCSSKALVVQARKVQSHLVTFSP--LPPIFLLNRAIEAYG 107
Query: 112 VCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFS 171
CG +D+AR +F++ E S W A+ ++N +S E ++R M V +F+
Sbjct: 108 KCGCVDDARELFEEMPERDGGS-WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFA 166
Query: 172 VALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR 231
LK+C + D R+ R +H + K + + +++ Y +C D RVF+ +
Sbjct: 167 GVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNP 226
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
+ VSWN ++ + G E + F M L+ + T+++V+ C++ AL GK I
Sbjct: 227 SDVSWNVIVRRYLEMGFNDEAVVMFFKM-LELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQI 351
H VK AD + ++ DMY KC + ++VFD SKDL SW + ++GY+++G
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 352 EKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQ 397
+A +LFD M NI +++ ++L G H+ E F LM+
Sbjct: 346 REARELFDLMPERNI----VSWNAMLGGYVHAHEWDEALDFLTLMR 387
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 184/366 (50%), Gaps = 5/366 (1%)
Query: 69 LLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE 128
LL+LC R E G+++H +++ + N ++S L+ Y+ CG L A R F EE
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVG---VGNLIVESSLVYFYAQCGELTSALRAFDMMEE 246
Query: 129 DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRA 188
S W A+ SR +A+ ++ ML P F LKAC++ R GR
Sbjct: 247 KDVIS-WTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQ 305
Query: 189 IHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGK 248
+H+ + KR + D V +L+ Y +CG D +VF+ M RN V+W ++IA + +G
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 365
Query: 249 VFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLN 308
E + FR M+ + + + +T+ ++L C + AL GKE+H QI+K+ + + + +
Sbjct: 366 GEEAISLFRIMKRRHLIANN-LTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGS 424
Query: 309 ALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRP 368
L+ +Y KCG V + S+D+ SW M++G S G +A+D EMI+ + P
Sbjct: 425 TLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 484
Query: 369 DGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVA 428
+ T+ S L C++S G+ ++ + ++ + L+ + + G + EA V
Sbjct: 485 NPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVF 544
Query: 429 RNMPMK 434
+MP K
Sbjct: 545 DSMPEK 550
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 161/315 (51%), Gaps = 4/315 (1%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
+ +L C K+L G+++H L K + + + + L+ +Y+ CG + + R+VF D
Sbjct: 287 VCSILKACSEEKALRFGRQVHS--LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF-D 343
Query: 126 EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRV 185
+ W ++ ++R +EA+ ++R M R + N L+AC VG +
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 186 GRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSG 245
G+ +HAQ+ K E + + + L+ Y +CG S D V + +P R+VVSW +I+G S
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 246 QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRP 305
G E LD + M ++EG+ + T ++ L CA +L G+ IH K+ ++
Sbjct: 464 LGHESEALDFLKEM-IQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVF 522
Query: 306 LLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN 365
+ +AL+ MYAKCG + +VFD M K+L SW M+ GY+ NG +A+ L M
Sbjct: 523 VGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEG 582
Query: 366 IRPDGITFVSLLSGC 380
D F ++LS C
Sbjct: 583 FEVDDYIFATILSTC 597
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 188/367 (51%), Gaps = 10/367 (2%)
Query: 109 LYSVCGRLDE---ARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP 165
L S C RL + AR+VF D + W AM GY + L EA ++ D + +
Sbjct: 123 LISSCVRLGDLVYARKVF-DSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRF 181
Query: 166 GN-FAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRV 224
N F L C+ + +GR +H + K + +V ++L+ FY +CG LR
Sbjct: 182 TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRA 240
Query: 225 FEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTA 284
F++M +++V+SW +I+ S +G + + F M L + T+ ++L C++ A
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGM-LNHWFLPNEFTVCSILKACSEEKA 299
Query: 285 LHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAG 344
L G+++H +VK K D + +LMDMYAKCG I C+KVFDGM +++ +W +++A
Sbjct: 300 LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAA 359
Query: 345 YSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPS 404
++ G E+AI LF M R ++ + +T VS+L C G G++ + ++ +
Sbjct: 360 HAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKN 419
Query: 405 LEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLF 464
+ + LV + + G+ +A V + +P + S W ++++ C G+ S A + +
Sbjct: 420 VYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS-WTAMISGCSSLGHESEALDFLKEMI 478
Query: 465 E--IEPN 469
+ +EPN
Sbjct: 479 QEGVEPN 485
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 8/219 (3%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQD 125
+ +L C S +L G++LH ++ K + +N + S L+ LY CG E+R F
Sbjct: 388 VVSILRACGSVGALLLGKELHAQII--KNSIEKNVYIGSTLVWLYCKCG---ESRDAFNV 442
Query: 126 EEEDPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDS 183
++ P V W AM G S EAL ++M+ VEP F +S ALKAC +
Sbjct: 443 LQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL 502
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
+GR+IH+ K ++ V +AL+ Y +CG + RVF+ MP++N+VSW +I G+
Sbjct: 503 LIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGY 562
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL 282
+ G E L M+ EG T+L C +
Sbjct: 563 ARNGFCREALKLMYRME-AEGFEVDDYIFATILSTCGDI 600
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 4/262 (1%)
Query: 184 RVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGF 243
R+ + IHA K ++ N L+ V G +VF+ MP++N V+W +I G+
Sbjct: 99 RLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGY 158
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFS-WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKA 302
G E F +K G+ F+ +L +C++ G+++HG +VK G
Sbjct: 159 LKYGLEDEAFALFEDY-VKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VG 216
Query: 303 DRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMI 362
+ + ++L+ YA+CG + + FD ME KD+ SW +++ S G KAI +F M+
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 363 RSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLD 422
P+ T S+L CS G++ +L+ ++ + L+D+ + G++
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 423 EALTVARNMPMKLSGSIWGSLL 444
+ V M + + W S++
Sbjct: 337 DCRKVFDGMSNR-NTVTWTSII 357
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 12/219 (5%)
Query: 235 SWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQ 294
S+++ +GF G+ + +F + ++ + W+ + + + ++ A+ + K Q
Sbjct: 57 SFDSGFSGFKGENVNQDDSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAM-ALKCFDDQ 115
Query: 295 IVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKA 354
++ G N L+ + G + Y +KVFD M K+ +W M+ GY G ++A
Sbjct: 116 VIYFG--------NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEA 167
Query: 355 IDLFDEMIRSNIR-PDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVD 413
LF++ ++ IR + FV LL+ CS G++ M GV +L + LV
Sbjct: 168 FALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVY 226
Query: 414 ILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGN 452
+ G+L AL M K S W +++++C G+
Sbjct: 227 FYAQCGELTSALRAFDMMEEKDVIS-WTAVISACSRKGH 264
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 198/405 (48%), Gaps = 41/405 (10%)
Query: 61 YQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEAR 120
++ + S L C + L +++H ++ K + + L +LI++ S G A
Sbjct: 18 FRSPEASYFLRTCSNFSQL---KQIHTKII--KHNLTNDQLLVRQLISVSSSFGETQYAS 72
Query: 121 RVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVY-RDMLARSVEPGNFAFSVALKACTD 179
VF ++ + P W M S N +EALL++ M++ + F F +KAC
Sbjct: 73 LVF-NQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLA 131
Query: 180 VGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTL 239
R+G +H K D N L+ Y +CG +VF+ MP R++VSW T+
Sbjct: 132 SSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTM 191
Query: 240 IAGFSGQGK------VF-------------------------ETLDAFRAMQLKEGMGFS 268
+ G + VF E FR MQ+ + + +
Sbjct: 192 LYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD-VKPN 250
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFD 328
T+ +L QL +L G+ +H K+G D L AL+DMY+KCGS+ +KVFD
Sbjct: 251 EFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFD 310
Query: 329 GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR-SNIRPDGITFVSLLSGCSHSGLTS 387
M+ K L +WN+M+ ++G E+A+ LF+EM +++ PD ITFV +LS C+++G
Sbjct: 311 VMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVK 370
Query: 388 EGQKFFN-LMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
+G ++F ++Q YG+ P EH AC++ +L ++ ++++A + +M
Sbjct: 371 DGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 145/370 (39%), Gaps = 46/370 (12%)
Query: 171 SVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQ 230
S L+ C++ + IH ++ K + DQ++ L+ G + VF +
Sbjct: 24 SYFLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQS 80
Query: 231 RNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKE 290
+ +WN +I S K E L F M + F T V+ C +++ G +
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 291 IHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQ 350
+HG +K+G D N LMD+Y KCG +KVFD M + + SW TML G N Q
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 351 I-------------------------------EKAIDLFDEMIRSNIRPDGITFVSLLSG 379
+ ++A LF M +++P+ T V+LL
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 380 CSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSI 439
+ G S G+ + G L+D+ + G L +A V M K S +
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGK-SLAT 319
Query: 440 WGSLLNSCRLDGNVSLAETAAERLF-------EIEPNNAGNYVMLSNIYADAGMWEGVKR 492
W S++ S + G A LF +EP+ +LS + +G++
Sbjct: 320 WNSMITSLGVHG----CGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRY 375
Query: 493 VREMMAIRGI 502
M+ + GI
Sbjct: 376 FTRMIQVYGI 385
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 191/412 (46%), Gaps = 22/412 (5%)
Query: 234 VSWNTLIAGFSG---QGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKE 290
V+ N I F QG E ++ ++ K G I L + +C + AL + +
Sbjct: 82 VAQNVTIETFDSLCIQGNWREAVEVLDYLENK-GYAMDLIRLLGLAKLCGKPEALEAARV 140
Query: 291 IHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQ 350
+H I+ D NA+++MY+ C S+ KVF+ M + + M+ + NG
Sbjct: 141 VHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGY 200
Query: 351 IEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLM-QDYGVQPSLEHYA 409
E+AIDLF +P+G F + S C+ +G EG F M ++YG+ PS+EHY
Sbjct: 201 GEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYH 260
Query: 410 CLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPN 469
+ +L SG LDEAL MPM+ S +W +L+N R+ G+V L + AE + +++
Sbjct: 261 SVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDAT 320
Query: 470 NAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFR 529
+ AG+ A +KK+ S TF SS +
Sbjct: 321 RLDK-------VSSAGL-------VATKASDFVKKEP--STRSEPYFYSTFRPVDSSHPQ 364
Query: 530 SSAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAG 589
+ Y + +L + +K+ GY+P+T I + G+ E +A V +L+ +
Sbjct: 365 MNIIYETLM-SLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPR 423
Query: 590 MPIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
I + N+R+ DCH MK +S +T R ++ RD +H F+NG C C + W
Sbjct: 424 SAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 170/340 (50%), Gaps = 41/340 (12%)
Query: 106 LITLYSVCGRLDEARRVFQDEEEDPPESV--WVAMAIGYSRNRLSKEALLVYRDMLARSV 163
+IT ++ L+ AR+ F + P +SV W AM GY++N +++AL ++ DML V
Sbjct: 204 MITGFAKVKDLENARKYF---DRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGV 260
Query: 164 EPGNFAFSVALKACTDVGDSRVGRAI----------------------HA-----QLAKR 196
P + + + AC+ D + R++ HA Q A+R
Sbjct: 261 RPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARR 320
Query: 197 -----DEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFE 251
+ + V NA++ Y G ++F+ MP+RNVVSWN+LIAG++ G+
Sbjct: 321 IFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAAL 380
Query: 252 TLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALM 311
++ F M +T+ +VL C + L G I I K+ K + +L+
Sbjct: 381 AIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLI 440
Query: 312 DMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGI 371
MYA+ G++ K+VFD M+ +D+ S+NT+ ++ NG + ++L +M I PD +
Sbjct: 441 FMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500
Query: 372 TFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACL 411
T+ S+L+ C+ +GL EGQ+ F +++ P +HYAC+
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIFKSIRN----PLADHYACM 536
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 210/483 (43%), Gaps = 68/483 (14%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHS 92
+N K K + LRL E + + S + KS L Q L+
Sbjct: 74 VNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFS----FPVVIKSAGRFGILFQALVEK 129
Query: 93 KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL 152
G ++P +++ ++ +Y ++ AR+VF D+ S W M GY + +EA
Sbjct: 130 LG-FFKDPYVRNVIMDMYVKHESVESARKVF-DQISQRKGSDWNVMISGYWKWGNKEEAC 187
Query: 153 LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFY 212
++ DM+ E +++V + V D R
Sbjct: 188 KLF-DMMP---ENDVVSWTVMITGFAKVKDLENAR------------------------- 218
Query: 213 VECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
+ F+ MP+++VVSWN +++G++ G + L F M L+ G+ + T
Sbjct: 219 ----------KYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM-LRLGVRPNETTW 267
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES 332
V+ C+ + + I + + + + AL+DM+AKC I +++F+ + +
Sbjct: 268 VIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT 327
Query: 333 -KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
++L +WN M++GY+ G + A LFD M + N+ +++ SL++G +H+G + +
Sbjct: 328 QRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV----VSWNSLIAGYAHNGQAALAIE 383
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKL------DEALTVARNMPMKLSGSIWGSLLN 445
FF M DYG E ++ +L G + D + R +KL+ S + SL+
Sbjct: 384 FFEDMIDYGDSKPDE--VTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIF 441
Query: 446 SCRLDGNVSLAETAAERLF-EIEPNNAGNYVMLSNIYADAGMWEGVKRVREM--MAIRGI 502
GN+ A+R+F E++ + +Y L +A G +GV+ + + M GI
Sbjct: 442 MYARGGNL----WEAKRVFDEMKERDVVSYNTLFTAFAANG--DGVETLNLLSKMKDEGI 495
Query: 503 KKD 505
+ D
Sbjct: 496 EPD 498
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 145/363 (39%), Gaps = 52/363 (14%)
Query: 109 LYSVCGRLDEAR---RVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEP 165
+ S C RL R+ D P V +M +S+ ++ + L +Y + P
Sbjct: 45 IISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMP 104
Query: 166 GNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVF 225
F+F V +K+ R G A + K D V N ++ YV+ +VF
Sbjct: 105 DAFSFPVVIKSA-----GRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVF 159
Query: 226 EVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTAL 285
+ + QR WN +I+G+ G E F M E SW + T
Sbjct: 160 DQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM--PENDVVSWTVMIT----------- 206
Query: 286 HSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGY 345
+AK + +K FD M K + SWN ML+GY
Sbjct: 207 ---------------------------GFAKVKDLENARKYFDRMPEKSVVSWNAMLSGY 239
Query: 346 SINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSL 405
+ NG E A+ LF++M+R +RP+ T+V ++S CS S + L+ + V+ +
Sbjct: 240 AQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNC 299
Query: 406 EHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE 465
L+D+ + + A + + + + W ++++ G++S +A +LF+
Sbjct: 300 FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMS----SARQLFD 355
Query: 466 IEP 468
P
Sbjct: 356 TMP 358
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 121/303 (39%), Gaps = 51/303 (16%)
Query: 34 NPTLKSLCKSGKLEEALRLIES-------PNPTPYQDEDISQLLHLCISRKSLEHGQKLH 86
N L ++G E+ALRL PN T + + IS S L
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWV---------IVISACSFRADPSLT 283
Query: 87 QHL--LHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSR 144
+ L L + RV N +K+ L+ +++ C + ARR+F + W AM GY+R
Sbjct: 284 RSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTR 343
Query: 145 -----------NRLSKEALLVYRDMLARSVEPGNFAFSV--------------------- 172
+ + K ++ + ++A G A ++
Sbjct: 344 IGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMIS 403
Query: 173 ALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRN 232
L AC + D +G I + K + + +L+ Y G + RVF+ M +R+
Sbjct: 404 VLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERD 463
Query: 233 VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIH 292
VVS+NTL F+ G ETL+ M+ EG+ +T T+VL C + L G+ I
Sbjct: 464 VVSYNTLFTAFAANGDGVETLNLLSKMK-DEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
Query: 293 GQI 295
I
Sbjct: 523 KSI 525
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)
Query: 531 SAEYLKIWNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGM 590
S Y+K+ +L ++D+GY+P T VLHDI+EE K + HSERLA F +I+T G
Sbjct: 130 SKAYVKL-KSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGT 188
Query: 591 PIRITKNLRVCVDCHSWMKAVSRVTRRLIVLRDTNRFHHFENGTCSCMDHW 641
IR+ KNLR+C DCH+++K +S + R I++RD RFHHF +G CSC D+W
Sbjct: 189 TIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 157/352 (44%), Gaps = 13/352 (3%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEE---DPPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
S LI+ Y G +EA VF +E P + A+ + + + + + D +
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 161 RS-VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSG 219
R+ V+P F+ L C+ G R + ++ R E D N LL + G
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 220 DVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTV 275
+ MP + NVVS++T+I GF+ G+ E L+ F M+ G+ ++ T+
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL-GIALDRVSYNTL 450
Query: 276 LPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK-- 333
L I ++ +I ++ G K D NAL+ Y K G KKVF M+ +
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV 510
Query: 334 --DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
+L +++T++ GYS G ++A+++F E + +R D + + +L+ +GL
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSL 443
+ M G+ P++ Y ++D GRS +D + + + S S +L
Sbjct: 571 LIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 168/380 (44%), Gaps = 13/380 (3%)
Query: 64 EDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVF 123
+D + ++ +R + ++ + + R E L S +I+ G++ A+R+F
Sbjct: 197 DDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIF 256
Query: 124 QDEEEDPPESV---WVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDV 180
+ + + A+ Y R+ L +EA+ V+ M + P ++ + AC
Sbjct: 257 ETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKG 316
Query: 181 G-DSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVS 235
G + + ++ + + D++ N+LL G +F+ M R +V S
Sbjct: 317 GMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFS 376
Query: 236 WNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQI 295
+NTL+ G++ + M +K M + ++ +TV+ A+ + G++
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPVKRIMP-NVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 296 VKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES----KDLTSWNTMLAGYSINGQI 351
G DR N L+ +Y K G + M S KD+ ++N +L GY G+
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 352 EKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACL 411
++ +F EM R ++ P+ +T+ +L+ G S GL E + F + G++ + Y+ L
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 412 VDILGRSGKLDEALTVARNM 431
+D L ++G + A+++ M
Sbjct: 556 IDALCKNGLVGSAVSLIDEM 575
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMES----KDLTSWNTMLAGYSING-QIEKAIDLFDEM 361
+AL+ Y + G VF+ M+ +L ++N ++ G + ++ FDEM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 362 IRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKL 421
R+ ++PD ITF SLL+ CS GL + F+ M + ++ + Y L+D + + G++
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 422 DEALTVARNMPMKL-------SGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNY 474
D A + MP+K ++ + R D ++L R I + +Y
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL--FGEMRYLGIALDRV-SY 447
Query: 475 VMLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
L +IY G E + MA GIKKD
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 150/389 (38%), Gaps = 110/389 (28%)
Query: 102 LKSKLITLYSV---CGR----LDEARRVFQDEEED---PPESVWVAMAIGYSRNRLSKEA 151
L+ L+T +V CG+ + + F + + + P + ++ SR L + A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQL------------------ 193
++ +M R +E F+++ L A G + I AQ+
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 194 ---AKRDEEA--------------DQVVNNALLRFYVECGCSGDVLRVFEVMP----QRN 232
A R +EA D+V N LL Y + G S + L + M +++
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 233 VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIH 292
VV++N L+ G+ QGK E F M+ +E + + +T +T++ ++ EI
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMK-REHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 293 GQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME----SKDLTSWNTML------ 342
+ +G +AD L +AL+D K G +G + D M S ++ ++N+++
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Query: 343 ------AGYSINGQIEKA------------------------------------------ 354
A YS G + +
Sbjct: 598 ATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELS 657
Query: 355 --IDLFDEMIRSNIRPDGITFVSLLSGCS 381
+++F +M + I+P+ +TF ++L+ CS
Sbjct: 658 CILEVFRKMHQLEIKPNVVTFSAILNACS 686
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 169/409 (41%), Gaps = 27/409 (6%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSK 93
N + CK+G++ AL +++ + +P + L LC S K L+ ++ +L
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK-LKQAMEVLDRMLQRD 234
Query: 94 GRVIENPTLKSKLITLYSVC---------GRLDEARRVFQDEEEDPPESVWVAMAIGYSR 144
P + + I + + C LDE R D P + + G +
Sbjct: 235 CY----PDVITYTILIEATCRDSGVGHAMKLLDEMR----DRGCTPDVVTYNVLVNGICK 286
Query: 145 NRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVV 204
EA+ DM + +P ++ L++ G + A + ++ V
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 205 NNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQ 260
N L+ F G G + + E MPQ N +S+N L+ GF + K+ ++ M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM- 405
Query: 261 LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI 320
+ G +T T+L + + EI Q+ G N ++D AK G
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 321 GYCKKVFDGMESKDL----TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
G K+ D M +KDL ++++++ G S G++++AI F E R IRP+ +TF S+
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 377 LSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEAL 425
+ G S T F M + G +P+ Y L++ L G EAL
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/384 (19%), Positives = 157/384 (40%), Gaps = 19/384 (4%)
Query: 64 EDISQLLHL--CISRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARR 121
ED+ HL + LE G K +++++ + + + LI + G+ +A +
Sbjct: 101 EDVESNNHLRQMVRTGELEEGFKFLENMVYHGN--VPDIIPCTTLIRGFCRLGKTRKAAK 158
Query: 122 VFQDEEED---PPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACT 178
+ + E P + M GY + AL V M SV P ++ L++
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLC 215
Query: 179 DVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVV 234
D G + + ++ +RD D + L+ G +++ + M R +VV
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 235 SWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQ 294
++N L+ G +G++ E + M G + IT +L +++
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMP-SSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 295 IVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES----KDLTSWNTMLAGYSINGQ 350
+++ G N L++ + G +G + + M + S+N +L G+ +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 351 IEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYAC 410
+++AI+ + M+ PD +T+ ++L+ G + + N + G P L Y
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 411 LVDILGRSGKLDEALTVARNMPMK 434
++D L ++GK +A+ + M K
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAK 478
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 167/389 (42%), Gaps = 32/389 (8%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAI--------GYSRNRLSKEALLVY 155
+ LI+ ++ GR EA VF+ EED + + + G N+++ +
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITS----LV 267
Query: 156 RDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVEC 215
M + + P + ++ + C + + ++ D+V NALL Y +
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 216 GCSGDVLRVFEVMP----QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
+ ++V M ++V++N+LI+ ++ G + E ++ M K G T
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK-GTKPDVFT 386
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME 331
TT+L + + S I ++ +G K + NA + MY G K+FD +
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 332 ----SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
S D+ +WNT+LA + NG + +F EM R+ P+ TF +L+S S G
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 388 EGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM------PMKLSGSIWG 441
+ + M D GV P L Y ++ L R G +++ V M P +L+ +
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT---YC 563
Query: 442 SLLNSCRLDGNVSLAETAAERLFE--IEP 468
SLL++ + L + AE ++ IEP
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEP 592
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 190/483 (39%), Gaps = 68/483 (14%)
Query: 36 TLKSLCKSGKL-EEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKG 94
TL + CK G L +EA ++ E + + ++ L + KS H K +L+
Sbjct: 284 TLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS--HRPKEAMKVLNEMV 341
Query: 95 RVIENPTLKS--KLITLYSVCGRLDEA---RRVFQDEEEDPPESVWVAMAIGYSRNRLSK 149
+P++ + LI+ Y+ G LDEA + ++ P + + G+ R +
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
A+ ++ +M +P F+ +K + G I ++ D V N LL
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 210 RFYVECGCSGDVLRVFEVMPQRNVV----SWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
+ + G +V VF+ M + V ++NTLI+ +S G + + +R M L G+
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM-LDAGV 520
Query: 266 GFSWITLTTVLP-----------------------------ICAQLTALHSGKEIH---- 292
T TVL C+ L A +GKEI
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 293 -GQIVKSGKKADRP-LLNALMDMYAKCGSIGYCKKVFDGME----SKDLTSWNTMLAGYS 346
+ V SG R LL L+ + +KC + ++ F ++ S D+T+ N+M++ Y
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Query: 347 INGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLE 406
+ KA + D M P T+ SL+ S S + ++ + G++P +
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDII 700
Query: 407 HYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSC----RLDGNVSLAETAAER 462
Y ++ RN M+ + I+ + NS + N + AA+
Sbjct: 701 SYNTVI------------YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 463 LFE 465
+FE
Sbjct: 749 MFE 751
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 137/331 (41%), Gaps = 14/331 (4%)
Query: 106 LITLYSVCGRLDEARRVFQDEEED---PPESVWVAMAIGYSRNRLSKEALLVYRDMLARS 162
L+ ++ G E VF++ + P + + YSR ++A+ VYR ML
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYV---ECGCSG 219
V P ++ L A G + A++ + +++ +LL Y E G
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 220 DVLR-VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE-GMGFSWITLTTVLP 277
+ V+ + + V TL+ S + E AF +LKE G TL +++
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS--ELKERGFSPDITTLNSMVS 637
Query: 278 ICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK---- 333
I + + + + + G N+LM M+++ G +++ + +K
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
D+ S+NT++ Y N ++ A +F EM S I PD IT+ + + + + E
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757
Query: 394 NLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
M +G +P+ Y +VD + + DEA
Sbjct: 758 RYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 131/310 (42%), Gaps = 13/310 (4%)
Query: 94 GRVIENPTLKSKLITLYSVCGRLDEARRVFQ---DEEEDPPESVWVAMAIGYSRNRLSKE 150
G V E T + LI+ YS CG ++A V++ D P S + + +R + ++
Sbjct: 484 GFVPERETFNT-LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 151 ALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLR 210
+ V +M +P + L A + + + ++ ++ E V+ L+
Sbjct: 543 SEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL 602
Query: 211 FYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMG 266
+C + R F + +R ++ + N++++ + + V + M+ + G
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK-ERGFT 661
Query: 267 FSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKV 326
S T +++ + ++ +EI +I+ G K D N ++ Y + + ++
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 327 FDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSH 382
F M + D+ ++NT + Y+ + E+AI + MI+ RP+ T+ S++ G
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Query: 383 SGLTSEGQKF 392
E + F
Sbjct: 782 LNRKDEAKLF 791
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 164/348 (47%), Gaps = 28/348 (8%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHG-QKLHQHLLHS 92
NP+ S C + + LRL++S + +EDI L +R++ + G +L H++ S
Sbjct: 65 NPS--SRCSTSDI---LRLMDSLSLPG--NEDIYSCLAKESARENDQRGAHELQVHIMKS 117
Query: 93 KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL 152
R T ++L+ ++ CGRLD R++F D W + +G ++A
Sbjct: 118 SIR--PTITFINRLLLMHVSCGRLDITRQMF-DRMPHRDFHSWAIVFLGCIEMGDYEDAA 174
Query: 153 LVYRDMLARSVEPGNFA-----FSVALKACTDVGDSRVGRAIHA---QLAKRDEEADQVV 204
++ ML S + G F LKAC + D +G+ +HA +L DEE D +
Sbjct: 175 FLFVSMLKHS-QKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEE-DSYL 232
Query: 205 NNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEG 264
+ +L+RFY E C D V + N V+W + +G+ E + F M G
Sbjct: 233 SGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMG-NHG 291
Query: 265 MGFSWITLTTVLPICAQLT-ALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYC 323
+ + + VL C+ ++ SG+++H +K G ++D + L++MY K G +
Sbjct: 292 IKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDA 351
Query: 324 KKVFDGMESKDLTS---WNTMLAGYSINGQIEKAIDLFDEMIRSNIRP 368
+KVF SKD TS WN M+A Y NG +AI L +M + I+
Sbjct: 352 EKVFKS--SKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKA 397
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 115/295 (38%), Gaps = 9/295 (3%)
Query: 165 PGNF-AFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR 223
PGN +S K D R + + K N LL +V CG +
Sbjct: 85 PGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQ 144
Query: 224 VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF----SWITLTTVLPIC 279
+F+ MP R+ SW + G G + F +M G SWI L VL C
Sbjct: 145 MFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWI-LGCVLKAC 203
Query: 280 AQLTALHSGKEIHGQIVKSG--KKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTS 337
A + GK++H K G + D L +L+ Y + + V + + + +
Sbjct: 204 AMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVA 263
Query: 338 WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSH-SGLTSEGQKFFNLM 396
W + G+ ++ I F EM I+ + F ++L CS S GQ+
Sbjct: 264 WAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANA 323
Query: 397 QDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDG 451
G + L+++ G+ GK+ +A V ++ + S S W +++ S +G
Sbjct: 324 IKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG 378
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 200/451 (44%), Gaps = 28/451 (6%)
Query: 104 SKLITLYSVCGRLDEARRVFQD--EEEDPPESVWVAMAI-GYSRNRLSKEALLVYRDMLA 160
S L+ + + GR+ EA + E + P+ V V+ I G EAL++ M+
Sbjct: 144 STLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE 203
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
+P + L G+S + + ++ +R+ +A V + ++ + G D
Sbjct: 204 YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD 263
Query: 221 VLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL 276
L +F M + +VV++++LI G GK + R M + + +T + ++
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-IGRNIIPDVVTFSALI 322
Query: 277 PICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK--- 333
+ + L KE++ +++ G D N+L+D + K + ++FD M SK
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 334 -DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKF 392
D+ +++ ++ Y +++ + LF E+ + P+ IT+ +L+ G SG + ++
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 393 FNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMP---MKLSGSIWGSLL----N 445
F M GV PS+ Y L+D L +G+L++AL + M M L I+ ++ N
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 446 SCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
+ ++D SL + +++ ++P+ VM+ + + E R+M K+
Sbjct: 503 ASKVDDAWSLFCSLSDK--GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM-------KE 553
Query: 506 AGCSWIQIKQRIHTFVAGGSSDFRSSAEYLK 536
GC+ I G S SS E ++
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 178/403 (44%), Gaps = 29/403 (7%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPYQDEDISQ---LLHLCISRKS---LEHGQKLHQHLL 90
+ LC G++ EAL LI+ +Q ++++ L LC S S L+ +K+ +
Sbjct: 182 INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-- 239
Query: 91 HSKGRVIENPTLKSKLITLYSVC--GRLDEARRVFQDEEEDPPES---VWVAMAIGYSRN 145
+ K V++ I + S+C G D+A +F + E ++ + ++ G +
Sbjct: 240 NIKASVVQYS------IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 146 RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN 205
+ + R+M+ R++ P FS + G + ++ ++ R D +
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
N+L+ + + C + ++F++M + ++V+++ LI + +V + + FR +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
K G+ + IT T++ Q L++ KE+ ++V G L+D G +
Sbjct: 414 K-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 322 YCKKVFDGMESKDLT----SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
++F+ M+ +T +N ++ G +++ A LF + ++PD +T+ ++
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDI-LGRSG 419
G G SE F M++ G P Y L+ LG SG
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 128/302 (42%), Gaps = 19/302 (6%)
Query: 220 DVLRVFEVM----PQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTV 275
D + +FE M P + +N L + + + L + M+L G+ T+T +
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN-GIEHDMYTMTIM 111
Query: 276 LPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM----E 331
+ + L + G+ K G + D + L++ + G + + D M +
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
DL + +T++ G + G++ +A+ L D M+ +PD +T+ +L+ SG ++
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK-------LSGSIWGSLL 444
F M++ ++ S+ Y+ ++D L + G D+AL++ M MK S+ G L
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 445 NSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKK 504
N + D + R I P+ + L +++ G K + M RGI
Sbjct: 292 NDGKWDDGAKMLREMIGR--NIIPDVV-TFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 505 DA 506
D
Sbjct: 349 DT 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 162/407 (39%), Gaps = 59/407 (14%)
Query: 45 KLEEALRLIES-----PNPTPYQDEDISQLLHLCISRKSLE------HGQKLH--QHLLH 91
K+ +A+ L ES P PTP D ++L K + G +L+ +H ++
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPI---DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 106
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEA 151
+ +I K KL+ +SV GR A ++ +P + + G+ EA
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGR---AWKL----GYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
+ + M+ P S + G + ++ + + D+V +L
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 212 YVECGCSGDVLRVFEVMPQRN----VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
+ G S L +F M +RN VV ++ +I G + L F M++K G+
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK-GIKA 278
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF 327
+T ++++ G ++ +++ D +AL+D++ K
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK----------- 327
Query: 328 DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
G++ +A +L++EMI I PD IT+ SL+ G
Sbjct: 328 --------------------EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 388 EGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
E + F+LM G +P + Y+ L++ ++ ++D+ + + R + K
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 125/267 (46%), Gaps = 9/267 (3%)
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
+A + RDM+ R ++P F+ + G+ R ++ ++ +R + N+L+
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 210 RFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
+ GC GD +F++M + +VV++NTLI GF +V + + F M + +
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 266 GFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKK 325
G ++ T + C Q L+ +++ ++V G D N L+D G I
Sbjct: 357 GDAFTYNTLIHGYC-QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 326 VFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
+ + ++ D+ ++N ++ G ++++A LF + R ++PD I +++++SG
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Query: 382 HSGLTSEGQKFFNLMQDYGVQPSLEHY 408
GL E K M++ G PS Y
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 113/220 (51%), Gaps = 9/220 (4%)
Query: 220 DVLRVFEVMPQRNV----VSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTV 275
+ L VF M ++ + V++NTLI+G S G+ + R M +K + + I T +
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM-VKRKIDPNVIFFTAL 260
Query: 276 LPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK-- 333
+ + L + ++ ++++ + N+L++ + G +G K +FD M SK
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 334 --DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
D+ ++NT++ G+ + ++E + LF EM + D T+ +L+ G +G + QK
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
FN M D GV P + Y L+D L +GK+++AL + ++
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 123/313 (39%), Gaps = 31/313 (9%)
Query: 141 GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEA 200
G+ + +EA+ + M P ++ + D + + K+ A
Sbjct: 158 GFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRA 217
Query: 201 DQVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAF 256
D V N L+ G D R+ M +R NV+ + LI F +G + E + +
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 257 RAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHG----------QIVKSGKKADRPL 306
+ M + +V+P +L +G IHG +V G D
Sbjct: 278 KEMIRR-----------SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 307 LNALMDMYAKCGSIG-----YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM 361
N L+ + K + +C+ + G+ D ++NT++ GY G++ A +F+ M
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVG-DAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 362 IRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKL 421
+ + PD +T+ LL ++G + +Q + + Y ++ L R+ KL
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 422 DEALTVARNMPMK 434
EA + R++ K
Sbjct: 446 KEAWCLFRSLTRK 458
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 116/281 (41%), Gaps = 31/281 (11%)
Query: 293 GQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES----KDLTSWNTMLAGYSIN 348
G+++K G + L +L++ + + + D M+ ++ +NT++ G N
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHY 408
+ A+++F M + IR D +T+ +L+SG S+SG ++ + M + P++ +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 409 ACLVDILGRSGKLDEALTVARNMPMK--------LSGSIWGSLLNSCRLDGNVSLAETAA 460
L+D + G L EA + + M + + I G ++ C D +
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 461 ERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTF 520
+ F P+ +++ + +G+K E M +G+ DA IH +
Sbjct: 318 KGCF---PDVVTYNTLITGFCKSKRVEDGMKLFCE-MTYQGLVGDA----FTYNTLIHGY 369
Query: 521 VAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVVLHDI 561
G L + + N + D G P D+V ++I
Sbjct: 370 CQAGK---------LNVAQKVFNRMVDCGVSP--DIVTYNI 399
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 152/327 (46%), Gaps = 15/327 (4%)
Query: 131 PESVWVAMAIG--YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRA 188
P+++ I + N+ S+ LV R M+ R +P + V + GD +
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDR-MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171
Query: 189 IHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFS 244
+ ++ EAD V+ N ++ + D L +F+ M + NVV++++LI+
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 245 GQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADR 304
G+ + M +++ + + +T ++ + +++H ++K D
Sbjct: 232 SYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 305 PLLNALMDMYAKCGSIGYCKKVFDGMESKD----LTSWNTMLAGYSINGQIEKAIDLFDE 360
N+L++ + + K++F+ M SKD L ++NT++ G+ + ++E +LF E
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 361 MIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGK 420
M + D +T+ +L+ G H G QK F M GV P + Y+ L+D L +GK
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 421 LDEALTVARNM---PMKLSGSIWGSLL 444
L++AL V M +KL I+ +++
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMI 437
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/443 (20%), Positives = 190/443 (42%), Gaps = 33/443 (7%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHS 92
L+ L C ++ +A+ L++ Y+ + I+ +L HG LH +
Sbjct: 83 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPD--------TITFTTLIHGLFLHNKASEA 134
Query: 93 KG---RVIE---NPTLKSKLITLYSVC--GRLDEARRVFQDEEEDPPES---VWVAMAIG 141
R+++ P L + + + +C G +D A + E E+ ++ +
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
+ R +AL ++++M + + P +S + G + + + ++ +
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFR 257
V NAL+ +V+ G + ++ + M +R ++ ++N+LI GF ++ + F
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M K+ T T++ + + G E+ ++ G D L+
Sbjct: 315 FMVSKDCFP-DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 318 GSIGYCKKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITF 373
G +KVF M S D+ +++ +L G NG++EKA+++FD M +S I+ D +
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Query: 374 VSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM-- 431
+++ G +G +G F + GV+P++ Y ++ L L EA + + M
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 432 --PMKLSGSIWGSLLNSCRLDGN 452
P+ SG+ + +L+ + DG+
Sbjct: 494 DGPLPDSGT-YNTLIRAHLRDGD 515
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 129/321 (40%), Gaps = 30/321 (9%)
Query: 157 DMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECG 216
DM+ + + P F+ + A G +H + KR + D N+L+ +
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF---- 300
Query: 217 CSGDVL----RVFEVMPQRNVV----SWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS 268
C D L ++FE M ++ ++NTLI GF +V + + FR M G+
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS-HRGLVGD 359
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFD 328
+T TT++ + +++ Q+V G D + L+D G + +VFD
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 329 GMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
M+ D+ + TM+ G G+++ DLF + ++P+ +T+ +++SG
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 479
Query: 385 LTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLL 444
L E M++ G P Y L+ R G + + R M
Sbjct: 480 LLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM------------- 526
Query: 445 NSCRLDGNVSLAETAAERLFE 465
SCR G+ S A L +
Sbjct: 527 RSCRFVGDASTIGLVANMLHD 547
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 14/197 (7%)
Query: 335 LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFN 394
+ + +++L GY +I A+ L D+M+ RPD ITF +L+ G SE +
Sbjct: 80 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 139
Query: 395 LMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM---PMKLSGSIWGSLLNS-CR-- 448
M G QP+L Y +V+ L + G +D A + M ++ I+ ++++S C+
Sbjct: 140 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 199
Query: 449 -LDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAG 507
+D ++L + + I P N Y L + G W ++ M I+K
Sbjct: 200 HVDDALNLFKEMETK--GIRP-NVVTYSSLISCLCSYGRWSDASQLLSDM----IEKKIN 252
Query: 508 CSWIQIKQRIHTFVAGG 524
+ + I FV G
Sbjct: 253 PNLVTFNALIDAFVKEG 269
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 148/314 (47%), Gaps = 13/314 (4%)
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
+ N+ S+ LV R M+ R +P + V + GD+ + + ++ EAD
Sbjct: 201 FLHNKASEAVALVDR-MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFR 257
V+ N ++ + D L +F+ M + NVV++++LI+ G+ +
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M +++ + + +T ++ + ++++ ++K D N+L++ +
Sbjct: 320 DM-IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 318 GSIGYCKKVFDGMESKD----LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITF 373
+ K++F+ M SKD + ++NT++ G+ + ++E +LF EM + D +T+
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 374 VSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM-- 431
+L+ G H G QK F M GV P + Y+ L+D L +GKL++AL V M
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 432 -PMKLSGSIWGSLL 444
+KL I+ +++
Sbjct: 499 SEIKLDIYIYTTMI 512
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/443 (20%), Positives = 191/443 (43%), Gaps = 33/443 (7%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHS 92
L+ L C ++ +A+ L++ Y+ + I+ +L HG LH +
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPD--------TITFTTLIHGLFLHNKASEA 209
Query: 93 KG---RVIE---NPTLKSKLITLYSVC--GRLDEARRVFQDEEEDPPES---VWVAMAIG 141
R+++ P L + + + +C G D A + E E+ ++ +
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
+ R +AL ++++M + + P +S + G + + + ++ +
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFR 257
V NAL+ +V+ G + ++++ M +R ++ ++N+L+ GF ++ + F
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M K+ +T T++ + + G E+ ++ G D L+
Sbjct: 390 FMVSKDCFP-DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 318 GSIGYCKKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITF 373
G +KVF M S D+ +++ +L G NG++EKA+++FD M +S I+ D +
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 374 VSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM-- 431
+++ G +G +G F + GV+P++ Y ++ L L EA + + M
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 432 --PMKLSGSIWGSLLNSCRLDGN 452
P+ SG+ + +L+ + DG+
Sbjct: 569 DGPLPNSGT-YNTLIRAHLRDGD 590
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 174/440 (39%), Gaps = 58/440 (13%)
Query: 36 TLKSLCKSGKLEEALRLIESPNPTPYQDEDI---SQLLHLCISRKSLEHGQKLHQHLLHS 92
+ LCK G + AL L+ + + + + + LC R ++ L + + +
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH-VDDALNLFKEM-ET 288
Query: 93 KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE---DPPESVWVAMAIGYSRNRLSK 149
KG + N S LI+ GR +A ++ D E +P + A+ + +
Sbjct: 289 KG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
EA +Y DM+ RS++P F ++ + G +H +L K + +
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVN----------GFCMHDRLDKAKQ---------MF 388
Query: 210 RFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSW 269
F V C DV V++NTLI GF +V + + FR M G+
Sbjct: 389 EFMVSKDCFPDV------------VTYNTLIKGFCKSKRVEDGTELFREMS-HRGLVGDT 435
Query: 270 ITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDG 329
+T TT++ + +++ Q+V G D + L+D G + +VFD
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 330 MESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGL 385
M+ D+ + TM+ G G+++ DLF + ++P+ +T+ +++SG L
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 555
Query: 386 TSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLN 445
E M++ G P+ Y L+ R G + + R M
Sbjct: 556 LQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM-------------R 602
Query: 446 SCRLDGNVSLAETAAERLFE 465
SCR G+ S A L +
Sbjct: 603 SCRFVGDASTIGLVANMLHD 622
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 335 LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFN 394
+ + +++L GY +I A+ L D+M+ RPD ITF +L+ G SE +
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 395 LMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
M G QP+L Y +V+ L + G D AL + M
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 132/306 (43%), Gaps = 22/306 (7%)
Query: 157 DMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECG 216
DM+ R + P FS + A G ++ ++ KR + D ++L+ +
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 217 CSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
+ +FE+M + NVV++NTLI GF +V E ++ FR M + G+ + +T
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS-QRGLVGNTVTY 434
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES 332
TT++ Q + + + Q+V G D + L+D G + VF+ ++
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 333 K----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSE 388
D+ ++N M+ G G++E DLF + ++P+ +T+ +++SG GL E
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 389 GQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCR 448
F M++ G P Y L+ R G + + R M SCR
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM-------------RSCR 601
Query: 449 LDGNVS 454
G+ S
Sbjct: 602 FVGDAS 607
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 23/228 (10%)
Query: 304 RPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR 363
R L+ + + AK +GY D+ + N++L G+ +I A+ L +M+
Sbjct: 129 RSQLSLALAVLAKMMKLGY---------EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 364 SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDE 423
+PD TF +L+ G SE + M G QP L Y +V+ L + G +D
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 424 ALTVARNMP-------MKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVM 476
AL++ + M + + +I +L N ++ ++L + I P N Y
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK--GIRP-NVVTYNS 296
Query: 477 LSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGG 524
L + G W R+ M R I + + I FV G
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNV----VTFSALIDAFVKEG 340
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 154/376 (40%), Gaps = 49/376 (13%)
Query: 104 SKLITLYSVCGRLDEARRVFQD--EEEDPPESVWVAMAI-GYSRNRLSKEALLVYRDMLA 160
+ LI + CG LD + +F + E D P ++ I G+ + KEA ++ M+
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
R V P + ++ + VG ++ + + ++DEE + V N ++ + G D
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 221 VLRVFEVMPQR-----------------------------------------NVVSWNTL 239
+ + E+M +R +V+S+N L
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 240 IAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSG 299
I G + ++ + LD + + K G G +T +L + ++ E+ QI S
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAG-DRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 300 KKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT----SWNTMLAGYSINGQIEKAI 355
+ A++D + K G + K + M +L +N +L+ G +++A
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 356 DLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDIL 415
LF+EM R N PD ++F ++ G +G + M G+ P L Y+ L++
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609
Query: 416 GRSGKLDEALTVARNM 431
+ G LDEA++ M
Sbjct: 610 LKLGYLDEAISFFDKM 625
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 168/370 (45%), Gaps = 39/370 (10%)
Query: 95 RVIENPTLKSKLIT--------LYSVCG----RLDEARRVFQDEEEDPPESVWVA---MA 139
R + NP + SKL+ L S+C +L A VFQ + D S+ A +
Sbjct: 21 RKLLNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQ-QAVDSGSSLAFAGNNLM 79
Query: 140 IGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEE 199
R+R + A YR ML + S L+ + + + A + KR
Sbjct: 80 AKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFA 139
Query: 200 ADQVVNNALLRFY---VECGCSGDVLRVFE---VMPQRNVVSWNTLIAGFSGQGKVFETL 253
+ +N LL+ +ECG + +LR +MP +V S+NT+I GF +GK E
Sbjct: 140 FNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMP--DVFSYNTVIRGFC-EGKELE-- 194
Query: 254 DAFRAMQLK---EGMGFSWITLTTVLPICAQLTA--LHSGKEIHGQIVKSGKKADRPLLN 308
+A++L +G G SW +T + I A A + ++ G +AD +
Sbjct: 195 ---KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 309 ALMDMYAKCGSIGYCKKVFDGM----ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRS 364
+L+ + CG + K +FD + +S ++NT++ G+ GQ+++A ++F+ MI
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 365 NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
+RP+ T+ L+ G G T E + NLM + +P+ Y +++ L + G + +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 425 LTVARNMPMK 434
+ + M +
Sbjct: 372 VEIVELMKKR 381
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 9/271 (3%)
Query: 157 DMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECG 216
DM+ R + P FS + A G ++ ++ KR + D ++L+ +
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 217 CSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
+ +FE+M + NVV++NTLI GF +V E ++ FR M + G+ + +T
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS-QRGLVGNTVTY 433
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES 332
T++ Q ++I ++V G D + L+D K G + VF+ ++
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 333 K----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSE 388
D+ ++N M+ G G++E DLF + ++P+ I + +++SG GL E
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 389 GQKFFNLMQDYGVQPSLEHYACLVDILGRSG 419
F M++ G P+ Y L+ R G
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 145/311 (46%), Gaps = 13/311 (4%)
Query: 127 EEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVG 186
E P + + G + + EA+ + M+AR +P F + + GD +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 187 RAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAG 242
++ ++ K EAD V+ ++ D L +F M + NVV++N+LI
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 243 FSGQGKVFETLDAFRAMQ--LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGK 300
G+ DA R + ++ + + +T + ++ + L ++++ +++K
Sbjct: 300 LCNYGR---WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 301 KADRPLLNALMDMYAKCGSIGYCKKVFDGMESKD----LTSWNTMLAGYSINGQIEKAID 356
D ++L++ + + K +F+ M SKD + ++NT++ G+ ++E+ ++
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 357 LFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILG 416
LF EM + + + +T+ +L+ G +G QK F M GV P + Y+ L+D L
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 417 RSGKLDEALTV 427
+ GKL++AL V
Sbjct: 477 KYGKLEKALVV 487
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/418 (19%), Positives = 181/418 (43%), Gaps = 28/418 (6%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHS 92
L+ L C ++ EA+ L++ YQ ++ +L HG LH +
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPN--------TVTFNTLIHGLFLHNKASEA 204
Query: 93 KG---RVIE---NPTLKSKLITLYSVC--GRLDEARRVFQDEEEDPPES---VWVAMAIG 141
R++ P L + + +C G +D A + + E+ E+ ++ +
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
+ +AL ++ +M + + P ++ ++ + G + + + +R +
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFR 257
V +AL+ +V+ G + ++++ M +R ++ ++++LI GF ++ E F
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M K+ + +T T++ + + G E+ ++ + G + N L+ +
Sbjct: 385 LMISKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 318 GSIGYCKKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITF 373
G +K+F M S D+ +++ +L G G++EKA+ +F+ + +S + PD T+
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 374 VSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
++ G +G +G F + GV+P++ Y ++ R G +EA + R M
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%)
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
D+ + +++L GY +I +A+ L D+M +P+ +TF +L+ G SE
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALI 208
Query: 394 NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
+ M G QP L Y +V+ L + G +D AL++ + M
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 202/494 (40%), Gaps = 26/494 (5%)
Query: 33 LNPTLKSLCKSGKLEE-ALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLH 91
LN + +LCK GK+E+ L + Y D L S K L + +
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 92 SKGRVIENPTLKSKLITLYSVC--GRLDEARRVFQDEEED---PPESVWVAMAIGYSRNR 146
KG +P + + + +C G+ + A+ VF + P + + ++ + +
Sbjct: 298 GKGF---SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 147 LSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNN 206
E V+ DM +R V P FS + T G+ + + D V+
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 207 ALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLK 262
L++ Y G + + M Q+ +VV++NT++ G + + E F M +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 263 EGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGY 322
S+ TLT ++ +L L + E+ ++ + + D N L+D + K G I
Sbjct: 475 ALFPDSY-TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 323 CKKVFDGMESKDL----TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLS 378
K+++ M SK++ S++ ++ G + +A ++DEMI NI+P + S++
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593
Query: 379 GCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGS 438
G SG S+G+ F M G P Y L+ R + +A + + M + G
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 439 I-----WGSLLNSCRLDGNVSLAETAAERLFE--IEPNNAGNYVMLSNIYADAGMWEGVK 491
+ + S+L+ + AE ++ E + P+ + M++ + + E
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF- 712
Query: 492 RVREMMAIRGIKKD 505
R+ + M RG D
Sbjct: 713 RIHDEMLQRGFSPD 726
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 4/168 (2%)
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
+ G+G + TL ++ + + Q+ + G D N L+ Y+ G +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 322 YCKKVFDGMESKDLT----SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
++ + M K + ++NT++ G +G+ E+A ++F EM+RS + PD T+ SLL
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEAL 425
G E +K F+ M+ V P L ++ ++ + RSG LD+AL
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 174/404 (43%), Gaps = 33/404 (8%)
Query: 96 VIENPTLKSKLITLYSVCGRLDEA---RRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL 152
V+ N L + LI Y G++ EA R D+ + + G +N +A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 153 LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFY 212
++R+M + + P F++ V + + +G+ + +I ++ + + ++ N LL +
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 213 VECGCSGDVLRVFEVMPQR-------NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
SG++ + E++ + N V++ T+I G+ G + E F M+LK G+
Sbjct: 673 CR---SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GL 728
Query: 266 GFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKK 325
TT++ C +L + I G K + P NAL++ K G +
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF-NALINWVFKFGKTELKTE 787
Query: 326 V--------FDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
V FD + ++N M+ G +E A +LF +M +N+ P IT+ SLL
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM------ 431
+G G +E F+ G++P Y+ +++ + G +AL + M
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907
Query: 432 --PMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIE--PNNA 471
KLS S +LL+ G + +AE E + ++ P++A
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 182/417 (43%), Gaps = 22/417 (5%)
Query: 27 NHKPPPLNPTLKSLCKSGKLEEALRLIE---SPNPTPYQDEDISQLLHLCISRKSLEHGQ 83
N KP + + + K G +E+A L + + P Q + + L+ K++ G
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP-QAQAYASLIEGYCREKNVRQGY 402
Query: 84 KLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED---PPESVWVAMAI 140
+L + K ++ +P ++ G LD A + ++ P ++ +
Sbjct: 403 ELLVEM--KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 141 GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEA 200
+ +N +A+ V ++M + + P F ++ + + R+ ++ + +
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 201 DQVVNNALLRFYVECG--CSGDV----LRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLD 254
+ A + Y+E S D +R V+P N V LI + +GKV E
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLP--NKVLCTGLINEYCKKGKVIEACS 578
Query: 255 AFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMY 314
A+R+M + +G+ T T ++ + + +EI ++ G D L++ +
Sbjct: 579 AYRSM-VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 315 AKCGSIGYCKKVFDGMESKDLTS----WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDG 370
+K G++ +FD M + LT +N +L G+ +G+IEKA +L DEM + P+
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 371 ITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTV 427
+T+ +++ G SG +E + F+ M+ G+ P Y LVD R ++ A+T+
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 96/209 (45%), Gaps = 7/209 (3%)
Query: 227 VMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALH 286
++PQ ++ +LI G+ + V + + M+ K + S T TV+ L
Sbjct: 378 LIPQAQ--AYASLIEGYCREKNVRQGYELLVEMK-KRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 287 SGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK----DLTSWNTML 342
I +++ SG + + + L+ + + G +V M+ + D+ +N+++
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 343 AGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQ 402
G S ++++A EM+ + ++P+ T+ + +SG + + K+ M++ GV
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554
Query: 403 PSLEHYACLVDILGRSGKLDEALTVARNM 431
P+ L++ + GK+ EA + R+M
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSM 583
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/490 (21%), Positives = 214/490 (43%), Gaps = 44/490 (8%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHS 92
LN L C ++ EA+ L++ YQ + ++ +L HG L QH S
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPD--------TVTFTTLVHG--LFQHNKAS 187
Query: 93 KG-RVIENPTLKS---KLITLYSVC------GRLDEARRVFQDEEEDPPES---VWVAMA 139
+ ++E +K L+T +V G D A + E+ E+ ++ +
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 140 IGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEE 199
+ R +AL ++ +M + + P F +S + + G + + + +R
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 200 ADQVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDA 255
+ V N+L+ + + G + ++F+ M QR N+V++N+LI GF ++ E
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 256 FRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYA 315
F M K+ + +T T++ + + G E+ + + G + L+ +
Sbjct: 368 FTLMVSKDCLP-DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 316 KCGSIGYCKKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGI 371
+ + VF M S ++ ++NT+L G NG++EKA+ +F+ + +S + PD
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 372 TFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
T+ + G +G +G F + GV+P + Y ++ + G +EA T+ M
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 432 ----PMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIE----PNNAGNYVMLSNIYAD 483
P+ SG+ + +L+ + DG+ + +AE + E+ +A Y +++++ D
Sbjct: 547 KEDGPLPDSGT-YNTLIRAHLRDGDKA---ASAELIKEMRSCRFAGDASTYGLVTDMLHD 602
Query: 484 AGMWEGVKRV 493
+ +G V
Sbjct: 603 GRLDKGFLEV 612
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 335 LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFN 394
+ + N++L G+ +I +A+ L D+M+ +PD +TF +L+ G SE
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194
Query: 395 LMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
M G QP L Y +++ L + G+ D AL + M
Sbjct: 195 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 178/408 (43%), Gaps = 26/408 (6%)
Query: 28 HKPP--PLNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQK- 84
HKP LN + LC +GK+ +A+ LI+ T +Q +++ L + KS GQ
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS---GQTA 229
Query: 85 LHQHLLHS-KGRVIENPTLKSKLITLYSVC--GRLDEARRVFQDEEEDPPES---VWVAM 138
L LL + R I+ +K +I + +C G LD A +F + E ++ ++ +
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSII-IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 139 AIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDE 198
G+ + + RDM+ R + P AFS + G R +H ++ +R
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 199 EADQVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLD 254
D V +L+ + + + ++M + N+ ++N LI G+ + + L+
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 255 AFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMY 314
FR M L+ G+ +T T++ +L L KE+ ++V + D L+D
Sbjct: 409 LFRKMSLR-GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 315 AKCGSIGYCKKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDG 370
G ++F+ +E D+ +N ++ G +++ A DLF + ++PD
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 371 ITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRS 418
T+ ++ G G SE F M++ G P+ C +IL R+
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN----GCTYNILIRA 571
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 155/377 (41%), Gaps = 47/377 (12%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEE---DPPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
S LI + GR+ EA + E P A+ G N +A+L+ M+
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
+P + LK G + + + ++ +R + D V + ++ + G +
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 221 VLRVFEVMP----QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL 276
+F M + +++ + TLI GF G+ + R M +K + + + ++
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM-IKRKITPDVVAFSALI 324
Query: 277 PICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAK------------------CG 318
+ L +E+H ++++ G D +L+D + K CG
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 319 SI---------GYCKK--VFDGME----------SKDLTSWNTMLAGYSINGQIEKAIDL 357
GYCK + DG+E D ++NT++ G+ G++E A +L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 358 FDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGR 417
F EM+ +RPD +++ LL G +G + + F ++ ++ + Y ++ +
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 418 SGKLDEALTVARNMPMK 434
+ K+D+A + ++P+K
Sbjct: 505 ASKVDDAWDLFCSLPLK 521
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQL 282
++ ++ + + V+++TLI G +G+V E L+ M ++ G + ITL ++
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM-VEMGHKPTLITLNALVNGLCLN 190
Query: 283 TALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK----DLTSW 338
+ + ++V++G + + ++ + K G ++ ME + D +
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 339 NTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQD 398
+ ++ G +G ++ A +LF+EM + D I + +L+ G ++G +G K M
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 399 YGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
+ P + ++ L+D + GKL EA + + M
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 134/315 (42%), Gaps = 48/315 (15%)
Query: 220 DVLRVFEVM----PQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTV 275
D + +F+ M P+ ++ ++ L + + + LD + M+LK G+ + TL+ +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK-GIAHNLYTLSIM 113
Query: 276 LPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDL 335
+ C + L G+I+K +GY D
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIK----------------------LGY---------EPDT 142
Query: 336 TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNL 395
+++T++ G + G++ +A++L D M+ +P IT +L++G +G S+ +
Sbjct: 143 VTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDR 202
Query: 396 MQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM---PMKLSGSIWGSLLNSCRLDGN 452
M + G QP+ Y ++ ++ +SG+ A+ + R M +KL + +++ DG+
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 453 VSLAETAAERLFEIEPNNAG--NYVMLSNIYADAGMW-EGVKRVREMMAIRGIKKDAGCS 509
+ A + EI+ A Y L + AG W +G K +R+M IK+
Sbjct: 263 LDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM-----IKRKITPD 316
Query: 510 WIQIKQRIHTFVAGG 524
+ I FV G
Sbjct: 317 VVAFSALIDCFVKEG 331
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 178/406 (43%), Gaps = 21/406 (5%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQ--LLHLCISRKSLEHGQKLHQHLL 90
N + LCK ++ EA +++ + +DI+ L++ ++ + L +
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI- 348
Query: 91 HSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED----PPESVWVAMAIGYSRNR 146
K ++ TL +T GRLD+A+ V D P + ++ GY +
Sbjct: 349 -PKPEIVIFNTLIHGFVTH----GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 147 LSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNN 206
L AL V DM + +P +++++ + +G + +++ + + V N
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 207 ALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLK 262
L+ + + + + +F MP++ +V ++N+LI+G ++ L R M +
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM-IS 522
Query: 263 EGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGY 322
EG+ + +T T++ + + +++ ++V G D N+L+ + G +
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 323 CKKVFDGM----ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLS 378
+ +F+ M + S N ++ G +G +E+A++ EM+ PD +TF SL++
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 379 GCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
G +G +G F +Q G+ P + L+ L + G + +A
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 126/295 (42%), Gaps = 14/295 (4%)
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
K A V+ DML+R + P F F V +KA V + ++ + K + V+ L
Sbjct: 199 KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 209 LRFYVECGCSGDVLRVFEVMPQRNVV----SWNTLIAGFSGQGKVFETLDAFRAMQLKEG 264
+ +C + L++ E M V ++N +I G ++ E M ++ G
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR-G 317
Query: 265 MGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
IT ++ ++ + + K++ +I K + + N L+ + G + K
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 325 KVFDGMESK-----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG 379
V M + D+ ++N+++ GY G + A+++ +M +P+ ++ L+ G
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 380 CSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
G E N M G++P+ + CL+ + ++ EA+ + R MP K
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 168/405 (41%), Gaps = 50/405 (12%)
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE---DPPESVWVAMAIGYSR-NRL 147
+K + N + LI S C R++EA ++ ++ P + + +G + +R+
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAK------------ 195
++ A +V R ML R P + + + +G + + ++ K
Sbjct: 304 NEAAKMVNR-MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHG 362
Query: 196 -----RDEEADQVVN---------------NALLRFYVECGCSGDVLRVFEVMPQR---- 231
R ++A V++ N+L+ Y + G G L V M +
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
NV S+ L+ GF GK+ E + M +G+ + + ++ + + EI
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMS-ADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK----DLTSWNTMLAGYSI 347
++ + G K D N+L+ + I + + M S+ + ++NT++ +
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 348 NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEH 407
G+I++A L +EM+ D IT+ SL+ G +G + + F M G PS
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 408 YACLVDILGRSGKLDEALTVARNMPMKLSGS---IWGSLLNS-CR 448
L++ L RSG ++EA+ + M ++ S + SL+N CR
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 131/309 (42%), Gaps = 17/309 (5%)
Query: 100 PTLKSKLITLYSVC--GRLDEARRVFQDEEED--PPESVWVAMAI-GYSRNRLSKEALLV 154
P + S I + C G++DEA V + D P +V I + + EA+ +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 155 YRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVE 214
+R+M + +P + F+ + +V + + + + A+ V N L+ ++
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 215 CGCSGDVLR-----VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSW 269
G + + VF+ P + +++N+LI G G+V + F M L++G S
Sbjct: 542 RGEIKEARKLVNEMVFQGSPL-DEITYNSLIKGLCRAGEVDKARSLFEKM-LRDGHAPSN 599
Query: 270 ITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDG 329
I+ ++ + + E ++V G D N+L++ + G I +F
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 330 MESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGL 385
++++ D ++NT+++ G + A L DE I P+ T+ LL
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQE- 718
Query: 386 TSEGQKFFN 394
T + ++F+N
Sbjct: 719 TLDRRRFYN 727
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 182/418 (43%), Gaps = 28/418 (6%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHS 92
L+ L C S ++ EA+ L++ T YQ ++ +L HG LH +
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPN--------TVTFNTLIHGLFLHNKASEA 205
Query: 93 KG---RVIE---NPTLKSKLITLYSVC--GRLDEARRVFQDEEE---DPPESVWVAMAIG 141
R++ P L + + + +C G D A + E+ +P ++ + G
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
+ + +AL ++++M + + P +S + + G + + + +R D
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQRNV----VSWNTLIAGFSGQGKVFETLDAFR 257
+AL+ +V+ G + ++++ M +R++ V++++LI GF ++ E F
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M K +T T++ + + G E+ ++ + G + N L+ +
Sbjct: 386 FMVSKHCFP-DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 318 GSIGYCKKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITF 373
G +++F M S ++ ++NT+L G NG++EKA+ +F+ + RS + P T+
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 374 VSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
++ G +G +G F + GV+P + Y ++ R G +EA + + M
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 99/247 (40%), Gaps = 23/247 (9%)
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
++ + +++L GY + +I +A+ L D+M + +P+ +TF +L+ G SE
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 394 NLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPM-KLSGSIWGSLLNSCRLDG- 451
+ M G QP L Y +V+ L + G D A + M KL G L+ + +DG
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP---GVLIYNTIIDGL 266
Query: 452 -NVSLAETAAERLFEIEPN----NAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
+ A E+E N Y L + + G W R+ M R I D
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 507 GCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNTDVV----LHDIN 562
I FV G E K+++ + D + + ++ +HD
Sbjct: 327 ----FTFSALIDAFVKEG-----KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 563 EEMKVMW 569
+E K M+
Sbjct: 378 DEAKQMF 384
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 167/372 (44%), Gaps = 19/372 (5%)
Query: 106 LITLYSVCGRLDEARRVFQDEEE---DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARS 162
+I L++ +D+AR +F + ++ P + A+ + R + A+ + DML +
Sbjct: 149 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 208
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL 222
+ P ++ + AC G+ R + ++ D V +N +L Y L
Sbjct: 209 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 268
Query: 223 RVFEVMPQRNV----VSWNTLIAGFSGQGKVFETLDAFRAMQLKEG-MGFSWITLTTVLP 277
FE+M V ++N +I S G+ + LD F +M+ K +T T+++
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Query: 278 ICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK---- 333
+ + + + + + +V G K + NALM YA G G V ++
Sbjct: 329 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 388
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
D+ S+ +L Y + Q KA ++F M + +P+ +T+ +L+ +G +E + F
Sbjct: 389 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 448
Query: 394 NLMQDYGVQPSLEHYACLVDILGRSGK---LDEALTVARNMPMKLSGSIW----GSLLNS 446
M+ G++P++ L+ RS K +D L+ A++ + L+ + + GS +N+
Sbjct: 449 RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 508
Query: 447 CRLDGNVSLAET 458
L+ ++L ++
Sbjct: 509 AELEKAIALYQS 520
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 164/409 (40%), Gaps = 41/409 (10%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSK 93
N + + SG EAL + + + ++ + L + ++ + L L
Sbjct: 217 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276
Query: 94 GRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED-----PPESVWVAMAIGYSRNRLS 148
+V + T + +I S G+ +A +F E P + ++ YS
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 336
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
+ V+ M+A ++P +++ + A G S ++ + + D V L
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 209 LRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEG 264
L Y G VF +M + NVV++N LI + G + E ++ FR M+ ++G
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME-QDG 455
Query: 265 MGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
+ + +++ T+L C++ S K+++ V S ++ LN
Sbjct: 456 IKPNVVSVCTLLAACSR-----SKKKVNVDTVLSAAQSRGINLNT--------------- 495
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
++N+ + Y ++EKAI L+ M + ++ D +TF L+SG
Sbjct: 496 -----------AAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544
Query: 385 LTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPM 433
E + M+D + + E Y+ ++ + G++ EA ++ M M
Sbjct: 545 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKM 593
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 151/361 (41%), Gaps = 21/361 (5%)
Query: 104 SKLITLYSVCGRLDEARRVFQD---EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
+ ++ LYSV G ++ R VF+ E P + A+ Y+ + +S AL V D+
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 161 RSVEPGNFAFSVALKACTDVGDSRV-GRAIHAQLAKRDE--EADQVVNNALLRFYVECGC 217
+ P +++ L + G SR G+A L R E + + V NAL+ Y G
Sbjct: 384 NGIIPDVVSYTCLLNS---YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 440
Query: 218 SGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLT 273
+ + +F M Q NVVS TL+A S K A Q + G+ +
Sbjct: 441 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR-GINLNTAAYN 499
Query: 274 TVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMD----MYAKCGSIGYCKKVFDG 329
+ + L ++ + K KAD L+ M +I Y K++ D
Sbjct: 500 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 559
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG 389
++++L YS GQ+ +A +F++M + PD I + S+L + S +
Sbjct: 560 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 619
Query: 390 QKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA---LTVARNMPMKLSGSIWGSLLNS 446
+ F M+ G++P + L+ + G+ + + R + +G+++ + ++
Sbjct: 620 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSA 679
Query: 447 C 447
C
Sbjct: 680 C 680
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 144/320 (45%), Gaps = 37/320 (11%)
Query: 208 LLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE 263
L+ Y + G RV V+ + NV+S+ L+ + GK FR MQ
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ-SS 203
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKEIHGQIV---KSGKKADRPLLNALMDMYAKCGSI 320
G S IT +L + +E+ ++ KS K D+ + + ++ MY K G+
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 321 GYCKKVFDGMESKDL----TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
+KVF M K + ++N++++ + ++ K ++D+M RS+I+PD +++ L
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALL 320
Query: 377 LSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPM-KL 435
+ + E F M D GV+P+ + Y L+D SG +++A TV ++M ++
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 436 SGSIW------GSLLNSCRLDGNVSLAETAAERLFE------IEPNNAGNYVMLSNIYAD 483
+W + +N+ ++G AE+ F+ EPN Y L YA
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEG--------AEKFFKRIKVDGFEPNIV-TYGTLIKGYAK 431
Query: 484 AGMWEGVKRVREMMAIRGIK 503
A E + V E M + GIK
Sbjct: 432 ANDVEKMMEVYEKMRLSGIK 451
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 135/341 (39%), Gaps = 20/341 (5%)
Query: 106 LITLYSVCGRLDEARRVFQ--DEEEDPPESV-WVAMAIGYSRNRLSKEALLVYRDMLARS 162
LIT Y G + A RV + P + + A+ Y R A ++R M +
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQL---AKRDEEADQVVNNALLRFYVECGCSG 219
EP + + LK + + + L K + DQ + + ++ Y + G
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 220 DVLRVFEVM-----PQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
+VF M PQ + V++N+L++ + +V + D + ++ + ++
Sbjct: 265 KARKVFSSMVGKGVPQ-STVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDV----VSYAL 319
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK- 333
++ + + +++ +G + N L+D +A G + K VF M
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 334 ---DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQ 390
DL S+ TML+ Y +E A F + P+ +T+ +L+ G + + +
Sbjct: 380 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 439
Query: 391 KFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
+ + M+ G++ + ++D GR AL + M
Sbjct: 440 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 480
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/355 (18%), Positives = 139/355 (39%), Gaps = 20/355 (5%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAI---GYSRNRLSKEALLVYRDMLA 160
+ L+ Y G+ + A +F+ + PE + I + KEA V+ +L
Sbjct: 178 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 237
Query: 161 RS---VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF---YVE 214
++P + + + G+ R + + + + V N+L+ F Y E
Sbjct: 238 EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE 297
Query: 215 CGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
D ++ ++ P +VVS+ LI + + E L F M L G+ +
Sbjct: 298 VSKIYDQMQRSDIQP--DVVSYALLIKAYGRARREEEALSVFEEM-LDAGVRPTHKAYNI 354
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF-----DG 329
+L A + K + + + D ++ Y + +K F DG
Sbjct: 355 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 414
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG 389
E ++ ++ T++ GY+ +EK ++++++M S I+ + +++
Sbjct: 415 FEP-NIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSA 473
Query: 390 QKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA--LTVARNMPMKLSGSIWGS 442
++ M+ GV P + L+ + +L+EA LT RN + ++GS
Sbjct: 474 LGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNETATIIARVYGS 528
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 167/372 (44%), Gaps = 19/372 (5%)
Query: 106 LITLYSVCGRLDEARRVFQDEEE---DPPESVWVAMAIGYSRNRLSKEALLVYRDMLARS 162
+I L++ +D+AR +F + ++ P + A+ + R + A+ + DML +
Sbjct: 17 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 76
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL 222
+ P ++ + AC G+ R + ++ D V +N +L Y L
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 136
Query: 223 RVFEVMPQRNV----VSWNTLIAGFSGQGKVFETLDAFRAMQLKEG-MGFSWITLTTVLP 277
FE+M V ++N +I S G+ + LD F +M+ K +T T+++
Sbjct: 137 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 196
Query: 278 ICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK---- 333
+ + + + + + +V G K + NALM YA G G V ++
Sbjct: 197 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 256
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFF 393
D+ S+ +L Y + Q KA ++F M + +P+ +T+ +L+ +G +E + F
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 316
Query: 394 NLMQDYGVQPSLEHYACLVDILGRSGK---LDEALTVARNMPMKLSGSIW----GSLLNS 446
M+ G++P++ L+ RS K +D L+ A++ + L+ + + GS +N+
Sbjct: 317 RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 376
Query: 447 CRLDGNVSLAET 458
L+ ++L ++
Sbjct: 377 AELEKAIALYQS 388
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 164/409 (40%), Gaps = 41/409 (10%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSK 93
N + + SG EAL + + + ++ + L + ++ + L L
Sbjct: 85 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 144
Query: 94 GRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED-----PPESVWVAMAIGYSRNRLS 148
+V + T + +I S G+ +A +F E P + ++ YS
Sbjct: 145 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 204
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
+ V+ M+A ++P +++ + A G S ++ + + D V L
Sbjct: 205 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 264
Query: 209 LRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEG 264
L Y G VF +M + NVV++N LI + G + E ++ FR M+ ++G
Sbjct: 265 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME-QDG 323
Query: 265 MGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
+ + +++ T+L C++ S K+++ V S ++ LN
Sbjct: 324 IKPNVVSVCTLLAACSR-----SKKKVNVDTVLSAAQSRGINLNT--------------- 363
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSG 384
++N+ + Y ++EKAI L+ M + ++ D +TF L+SG
Sbjct: 364 -----------AAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 412
Query: 385 LTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPM 433
E + M+D + + E Y+ ++ + G++ EA ++ M M
Sbjct: 413 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKM 461
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 150/361 (41%), Gaps = 21/361 (5%)
Query: 104 SKLITLYSVCGRLDEARRVFQD---EEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
+ ++ LYSV G ++ R VF+ E P + A+ Y+ + +S AL V D+
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 161 RSVEPGNFAFSVALKACTDVGDSRV-GRAIHAQLAKRDE--EADQVVNNALLRFYVECGC 217
+ P +++ L + G SR G+A L R E + + V NAL+ Y G
Sbjct: 252 NGIIPDVVSYTCLLNS---YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 218 SGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLT 273
+ + +F M Q NVVS TL+A S K A Q + G+ +
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR-GINLNTAAYN 367
Query: 274 TVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMD----MYAKCGSIGYCKKVFDG 329
+ + L ++ + K KAD L+ M +I Y K++ D
Sbjct: 368 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 427
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG 389
++++L YS GQ+ +A +F++M + PD I + S+L + S +
Sbjct: 428 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 487
Query: 390 QKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALT---VARNMPMKLSGSIWGSLLNS 446
+ F M+ G++P + L+ + G+ + R + +G+++ + ++
Sbjct: 488 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSA 547
Query: 447 C 447
C
Sbjct: 548 C 548
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 144/320 (45%), Gaps = 37/320 (11%)
Query: 208 LLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE 263
L+ Y + G RV V+ + NV+S+ L+ + GK FR MQ
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ-SS 210
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKEIHGQIV---KSGKKADRPLLNALMDMYAKCGSI 320
G S IT +L + +E+ ++ KS K D+ + + ++ MY K G+
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 321 GYCKKVFDGMESKDL----TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
+KVF M K + ++N++++ + ++ K ++D+M RS+I+PD +++ L
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALL 327
Query: 377 LSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPM-KL 435
+ + E F M D GV+P+ + Y L+D SG +++A TV ++M ++
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 436 SGSIW------GSLLNSCRLDGNVSLAETAAERLFE------IEPNNAGNYVMLSNIYAD 483
+W + +N+ ++G AE+ F+ EPN Y L YA
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEG--------AEKFFKRIKVDGFEPNIV-TYGTLIKGYAK 438
Query: 484 AGMWEGVKRVREMMAIRGIK 503
A E + V E M + GIK
Sbjct: 439 ANDVEKMMEVYEKMRLSGIK 458
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 133/341 (39%), Gaps = 20/341 (5%)
Query: 106 LITLYSVCGRLDEARRVFQ---DEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARS 162
LIT Y G + A RV P + A+ Y R A ++R M +
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQL---AKRDEEADQVVNNALLRFYVECGCSG 219
EP + + LK + + + L K + DQ + + ++ Y + G
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 220 DVLRVFEVM-----PQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
+VF M PQ + V++N+L++ + +V + D + ++ + ++
Sbjct: 272 KARKVFSSMVGKGVPQ-STVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDV----VSYAL 326
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK- 333
++ + + +++ +G + N L+D +A G + K VF M
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 334 ---DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQ 390
DL S+ TML+ Y +E A F + P+ +T+ +L+ G + + +
Sbjct: 387 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 446
Query: 391 KFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
+ + M+ G++ + ++D GR AL + M
Sbjct: 447 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 487
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/355 (18%), Positives = 139/355 (39%), Gaps = 20/355 (5%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAI---GYSRNRLSKEALLVYRDMLA 160
+ L+ Y G+ + A +F+ + PE + I + KEA V+ +L
Sbjct: 185 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 244
Query: 161 RS---VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF---YVE 214
++P + + + G+ R + + + + V N+L+ F Y E
Sbjct: 245 EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE 304
Query: 215 CGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTT 274
D ++ ++ P +VVS+ LI + + E L F M L G+ +
Sbjct: 305 VSKIYDQMQRSDIQP--DVVSYALLIKAYGRARREEEALSVFEEM-LDAGVRPTHKAYNI 361
Query: 275 VLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF-----DG 329
+L A + K + + + D ++ Y + +K F DG
Sbjct: 362 LLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDG 421
Query: 330 MESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG 389
E ++ ++ T++ GY+ +EK ++++++M S I+ + +++
Sbjct: 422 FEP-NIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSA 480
Query: 390 QKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA--LTVARNMPMKLSGSIWGS 442
++ M+ GV P + L+ + +L+EA LT RN + ++GS
Sbjct: 481 LGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNETATIIARVYGS 535
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 143/300 (47%), Gaps = 16/300 (5%)
Query: 223 RVFEVMP----QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPI 278
RVFEVM + ++V++NT+I G+ G+ + ++ R M+ + G IT T++
Sbjct: 243 RVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETR-GHEADKITYMTMIQA 301
Query: 279 CAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK----D 334
C + S ++ ++ + G + + ++ K G + VF+ M K +
Sbjct: 302 CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPN 361
Query: 335 LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFN 394
+ + ++ GY+ +G +E AI L MI +PD +T+ +++G +G E +F+
Sbjct: 362 VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFH 421
Query: 395 LMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK---LSGSIWGSLLNSCRLDG 451
+ G+ + Y+ L+D LG++G++DEA + M K + +L+++
Sbjct: 422 TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHR 481
Query: 452 NVSLAETAAERLFEIEPNNAGNY---VMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGC 508
V A +R+ E E + Y ++LS ++ + E +K + +MM +GI A C
Sbjct: 482 KVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALK-LWDMMIDKGITPTAAC 540
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/445 (20%), Positives = 194/445 (43%), Gaps = 31/445 (6%)
Query: 34 NPTLKSLCKSGKLEEAL----RLIESP-NPTPYQDEDISQLLHLCISRKSLEHGQKLHQH 88
N +KS K G +EE L ++ E+ PT Y + L++ +S ++ +++ +
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYT---YNFLMNGLVSAMFVDSAERVFE- 246
Query: 89 LLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPES---VWVAMAIGYSRN 145
+ GR+ + + +I Y G+ +A +D E E+ ++ M +
Sbjct: 247 -VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 305
Query: 146 RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN 205
+ +Y++M + ++ AFS+ + G G + + ++ + + +
Sbjct: 306 SDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIY 365
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
L+ Y + G D +R+ M +VV+++ ++ G G+V E LD F +
Sbjct: 366 TVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRF 425
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
+G+ + + ++++ + + + + ++ + G D NAL+D + K +
Sbjct: 426 -DGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 322 YCKKVFDGMESKD-----LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
+F ME ++ + ++ +L+G + E+A+ L+D MI I P F +L
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
Query: 377 LSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYAC--LVDILGRSGKLDEALTVARNMPMK 434
+G SG + K + + GV + AC +++ L ++G++ EA +A + +
Sbjct: 545 STGLCLSGKVARACKILDELAPMGV---ILDAACEDMINTLCKAGRIKEACKLADGITER 601
Query: 435 ---LSGSIWGSLLNSCRLDGNVSLA 456
+ G I ++N+ R G LA
Sbjct: 602 GREVPGRIRTVMINALRKVGKADLA 626
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 198/459 (43%), Gaps = 46/459 (10%)
Query: 62 QDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGR------VIENPTLKSKLITLYSVC-- 113
+D + H+ I + K+ ++ ++G+ I + +L + + C
Sbjct: 98 KDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCC 157
Query: 114 --GRLDEARRVFQDEEE----DPPESVWVAM--AIGYSRNRLSKEALLVYRDMLARS-VE 164
G +D+A +F + P +SV+ + IG R L + + D L R +E
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIAD----HFDKLCRGGIE 213
Query: 165 P-GNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR 223
P G A L A G+ H + +R V N +L+ G S D +
Sbjct: 214 PSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLK-----GLSVDQIE 268
Query: 224 V--------FEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTV 275
V + P NVV++ TLI GF +G++ D F+ M+ + G+ I +T+
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME-QRGIEPDLIAYSTL 327
Query: 276 LPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME---- 331
+ + L G ++ Q + G K D + ++ +D+Y K G + V+ M
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
S ++ ++ ++ G +G+I +A ++ ++++ + P +T+ SL+ G G G
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM---PMKLSGSIWGSLLNS-C 447
+ M G P + Y LVD L + G + A+ + M ++L+ ++ SL++ C
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 448 RLDG-NVSLAETAAERLFEIEPNNAG-NYVMLSNIYADA 484
RL+ + +L ++ I+P+ A VM +I DA
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDA 546
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 200/495 (40%), Gaps = 32/495 (6%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPYQDEDI--SQLLHLCISRKSLEHGQKLHQHLLHSKG 94
+ CK G+++ A L + + + I S L+ L G KL LH
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 95 RVIENPTLKSKLITLYSVCGRLDEARRVFQD---EEEDPPESVWVAMAIGYSRNRLSKEA 151
++ + + S I +Y G L A V++ + P + + G ++ EA
Sbjct: 353 KL--DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
+Y +L R +EP +S + G+ R G A++ + K D V+ L+
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 212 YVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
+ G +R M + NVV +N+LI G+ + E L FR M + G+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY-GIKP 529
Query: 268 SWITLTTVLPICAQLTALHS------GKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
T TTV+ + A G ++ + ++ AD + N ++ + KC I
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 322 YCKKVF----DGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
K F +G D+ ++NTM+ GY ++++A +F+ + + P+ +T L+
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM------ 431
+ + F++M + G +P+ Y CL+D +S ++ + + M
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709
Query: 432 PMKLSGS-IWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADAGMWEGV 490
P +S S I L R+D ++ A + ++ P+ Y +L Y G
Sbjct: 710 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA--KLLPDVVA-YAILIRGYCKVGRLVEA 766
Query: 491 KRVREMMAIRGIKKD 505
+ E M G+K D
Sbjct: 767 ALLYEHMLRNGVKPD 781
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 194/442 (43%), Gaps = 45/442 (10%)
Query: 93 KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL 152
KG ++ + S+L++L CG P + + G+ + A
Sbjct: 260 KGLSVDQIEVASRLLSLVLDCG-------------PAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 153 LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFY 212
+++ M R +EP A+S + G +G + +Q + + D VV ++ + Y
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 213 VECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS 268
V+ G V++ M + NVV++ LI G G+++E + + LK GM S
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI-LKRGMEPS 425
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCG----SIGYCK 324
+T ++++ + L SG ++ ++K G D + L+D +K G ++ +
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 325 KVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL------- 377
K+ ++ +N+++ G+ + ++A+ +F M I+PD TF +++
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMED 545
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSG 437
+ C H T G + F+LMQ + + ++ +L + ++++A N+ + G
Sbjct: 546 AFCKHMKPTI-GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL---IEG 601
Query: 438 SIWGSLLN-SCRLDGNVSLAET-AAERLFEI------EPNNAGNYVMLSNIYADAGMWEG 489
+ ++ + + G SL AER+FE+ PN +++ + + M +G
Sbjct: 602 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM-DG 660
Query: 490 VKRVREMMAIRGIKKDA---GC 508
R+ +MA +G K +A GC
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGC 682
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 6/215 (2%)
Query: 280 AQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWN 339
L A H K G I SG A +L+AL ++ + + V + + S N
Sbjct: 197 VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCN 256
Query: 340 TMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDY 399
+L G S++ QIE A L ++ P+ +TF +L++G G F +M+
Sbjct: 257 KVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 400 GVQPSLEHYACLVDILGRSGKLD---EALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
G++P L Y+ L+D ++G L + + A + +KL ++ S ++ G+++ A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 457 ETAAERLF--EIEPNNAGNYVMLSNIYADAGMWEG 489
+R+ I PN +++ + D ++E
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 182/423 (43%), Gaps = 44/423 (10%)
Query: 62 QDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGR------VIENPTLKSKLITLYSVC-- 113
+D + H+ I + K+ ++ ++G+ I + +L + + C
Sbjct: 98 KDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCC 157
Query: 114 --GRLDEARRVFQDEEE----DPPESVWVAM--AIGYSRNRLSKEALLVYRDMLARS-VE 164
G +D+A +F + P +SV+ + IG R L + + D L R +E
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIAD----HFDKLCRGGIE 213
Query: 165 P-GNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLR 223
P G A L A G+ H + +R V N +L+ G S D +
Sbjct: 214 PSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLK-----GLSVDQIE 268
Query: 224 V--------FEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTV 275
V + P NVV++ TLI GF +G++ D F+ M+ + G+ I +T+
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME-QRGIEPDLIAYSTL 327
Query: 276 LPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME---- 331
+ + L G ++ Q + G K D + ++ +D+Y K G + V+ M
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
S ++ ++ ++ G +G+I +A ++ ++++ + P +T+ SL+ G G G
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM---PMKLSGSIWGSLLNS-C 447
+ M G P + Y LVD L + G + A+ + M ++L+ ++ SL++ C
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 448 RLD 450
RL+
Sbjct: 508 RLN 510
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 160/381 (41%), Gaps = 18/381 (4%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPYQ-DEDISQLLHLCISRKSLE-HGQKLHQHLLHSKG 94
+ CK G L L E Y D I +L +S++ L H + +L
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 95 RVIENPTLKSKLITLYSVCGRLDEARRVFQDEE----EDPPESVWVAMAIGYSRNRLSKE 150
R+ N + + LI + R DEA +VF+ + + M + RL +E
Sbjct: 493 RL--NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRL-EE 549
Query: 151 ALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLR 210
AL ++ M +EP A+ + A +G + + + AD V N ++
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609
Query: 211 FYVECGCSGDVLRVF----EVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMG 266
+C D + F E + ++V++NT+I G+ ++ E F +++ G
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP-FG 668
Query: 267 FSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKV 326
+ +TLT ++ + + + + + + G K + LMD ++K I K+
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 327 FDGMESKDLT----SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSH 382
F+ M+ K ++ S++ ++ G G++++A ++F + I + + PD + + L+ G
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 383 SGLTSEGQKFFNLMQDYGVQP 403
G E + M GV+P
Sbjct: 789 VGRLVEAALLYEHMLRNGVKP 809
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 198/471 (42%), Gaps = 74/471 (15%)
Query: 93 KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEAL 152
KG ++ + S+L++L CG P + + G+ + A
Sbjct: 260 KGLSVDQIEVASRLLSLVLDCG-------------PAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 153 LVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFY 212
+++ M R +EP A+S + G +G + +Q + + D VV ++ + Y
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 213 VECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFS 268
V+ G V++ M + NVV++ LI G G+++E + + LK GM S
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI-LKRGMEPS 425
Query: 269 WITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI-------- 320
+T ++++ + L SG ++ ++K G D + L+D +K G +
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 321 -------------------GYCK--------KVFDGME----SKDLTSWNTMLAGYSING 349
G+C+ KVF M D+ ++ T++ + G
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEG 545
Query: 350 QIEKAIDLFDEMIRSNIRPDGITFVSLLSG-CSHSGLTSEGQKFFNLMQDYGVQPSLEHY 408
++E+A+ LF M + + PD + + +L+ C H T G + F+LMQ + +
Sbjct: 546 RLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI-GLQLFDLMQRNKISADIAVC 604
Query: 409 ACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLN-SCRLDGNVSLAET-AAERLFEI 466
++ +L + ++++A N+ + G + ++ + + G SL AER+FE+
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNL---IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 661
Query: 467 ------EPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA---GC 508
PN +++ + + M +G R+ +MA +G K +A GC
Sbjct: 662 LKVTPFGPNTVTLTILIHVLCKNNDM-DGAIRMFSIMAEKGSKPNAVTYGC 711
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 110/524 (20%), Positives = 202/524 (38%), Gaps = 61/524 (11%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPYQDEDI--SQLLHLCISRKSLEHGQKLHQHLLHSKG 94
+ CK G+++ A L + + + I S L+ L G KL LH
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 95 RVIENPTLKSKLITLYSVCGRLDEARRVFQD---EEEDPPESVWVAMAIGYSRNRLSKEA 151
++ + + S I +Y G L A V++ + P + + G ++ EA
Sbjct: 353 KL--DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
+Y +L R +EP +S + G+ R G A++ + K D V+ L+
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 212 YVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
+ G +R M + NVV +N+LI G+ + E L FR M + G+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY-GIKP 529
Query: 268 SWITLTTVLPI-----------------------------CAQLTALHS------GKEIH 292
T TTV+ + C + A G ++
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 293 GQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF----DGMESKDLTSWNTMLAGYSIN 348
+ ++ AD + N ++ + KC I K F +G D+ ++NTM+ GY
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHY 408
++++A +F+ + + P+ +T L+ + + F++M + G +P+ Y
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 409 ACLVDILGRSGKLDEALTVARNM------PMKLSGS-IWGSLLNSCRLDGNVSLAETAAE 461
CL+D +S ++ + + M P +S S I L R+D ++ A +
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769
Query: 462 RLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
++ P+ Y +L Y G + E M G+K D
Sbjct: 770 A--KLLPDVVA-YAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 6/215 (2%)
Query: 280 AQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWN 339
L A H K G I SG A +L+AL ++ + + V + + S N
Sbjct: 197 VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCN 256
Query: 340 TMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDY 399
+L G S++ QIE A L ++ P+ +TF +L++G G F +M+
Sbjct: 257 KVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315
Query: 400 GVQPSLEHYACLVDILGRSGKLD---EALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLA 456
G++P L Y+ L+D ++G L + + A + +KL ++ S ++ G+++ A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 457 ETAAERLF--EIEPNNAGNYVMLSNIYADAGMWEG 489
+R+ I PN +++ + D ++E
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 9/255 (3%)
Query: 157 DMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECG 216
DM+ R + P F+ + A G ++ ++ KR + D ++L+ +
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 217 CSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITL 272
+ +FE+M + NVV++NTLI GF ++ E ++ FR M + G+ + +T
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS-QRGLVGNTVTY 438
Query: 273 TTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES 332
TT++ Q + + + Q+V G + N L+D K G + VF+ ++
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 333 KDLT----SWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSE 388
+ ++N M+ G G++E DLF + ++PD I + +++SG GL E
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558
Query: 389 GQKFFNLMQDYGVQP 403
F M++ G P
Sbjct: 559 ADALFRKMREDGPLP 573
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 139/296 (46%), Gaps = 14/296 (4%)
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
+ N+ S+ LV R M+ R +P + V + GD + + ++ EA+
Sbjct: 201 FLHNKASEAVALVDR-MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFR 257
V+ + ++ + D L +F M + NV+++++LI+ + DA R
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER---WSDASR 316
Query: 258 AMQ--LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYA 315
+ ++ + + +T ++ + L ++++ +++K D ++L++ +
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 316 KCGSIGYCKKVFDGMESKD----LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGI 371
+ K +F+ M SKD + ++NT++ G+ +I++ ++LF EM + + + +
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 372 TFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTV 427
T+ +L+ G + Q F M GV P++ Y L+D L ++GKL++A+ V
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 98/209 (46%), Gaps = 5/209 (2%)
Query: 230 QRNVVSWNTLIAGFSGQGKV---FETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALH 286
Q N+V++ ++ G +G + F L+ A +++ + + ++ + AL+
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 287 SGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYS 346
E+ + V+ L++ L + + + + + ++ ++N ++ +
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 347 INGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG-CSHSGLTSEGQKFFNLMQDYGVQPSL 405
G++ +A L+DEMI+ +I PD T+ SL++G C H L E + F LM P++
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISKDCFPNV 400
Query: 406 EHYACLVDILGRSGKLDEALTVARNMPMK 434
Y L++ ++ ++DE + + R M +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQR 429
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 16/204 (7%)
Query: 244 SGQGKVFETL-DAFRAMQLKEGMG-FSWITLTTVLPICAQLTALHSG---KEIHGQIVKS 298
SG G E L + +M+L + +G F + + LP + L S + ++
Sbjct: 48 SGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISL 107
Query: 299 GKKADR-------PLLNALMDMYAKCGSIGYCKKVFDGM----ESKDLTSWNTMLAGYSI 347
G+K R N L++ + + I + M + + +++L GY
Sbjct: 108 GEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 348 NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEH 407
+I A+ L D+M+ RPD ITF +L+ G SE + M G QP+L
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 408 YACLVDILGRSGKLDEALTVARNM 431
Y +V+ L + G +D A + M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKM 251
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 173/371 (46%), Gaps = 26/371 (7%)
Query: 151 ALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDE-----EADQVVN 205
AL VY M++ V P F S+ + A G+ V +A+ AK E E + V
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGN--VDKAM--VFAKETESSLGLELNVVTY 264
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
N+L+ Y G + RV +M +R NVV++ +LI G+ +G + E F ++
Sbjct: 265 NSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE 324
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
K+ + + + C + + +H +++ G + + + N+L++ Y K G +
Sbjct: 325 KKLVADQHMYGVLMDGYC-RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 322 YCKKVFDGME----SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
+++F M D ++NT++ GY G +++A+ L D+M + + P +T+ LL
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK--L 435
G S G + + +M GV + L++ L + G +EA+ + N+ + L
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 436 SGSIWGSLLNS--CRLDGNVSLAETAAE--RLFEIEPNNAGNYVMLSNIYADAGMWEGVK 491
+ +I +++ S C+++ V+ A+ + +F +P Y LS+ Y G +
Sbjct: 504 TDTITLNVMISGLCKME-KVNEAKEILDNVNIFRCKP-AVQTYQALSHGYYKVGNLKEAF 561
Query: 492 RVREMMAIRGI 502
V+E M +GI
Sbjct: 562 AVKEYMERKGI 572
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 135/327 (41%), Gaps = 49/327 (14%)
Query: 118 EARRVFQDEEEDPPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKAC 177
E RVF++ P +V+ + Y+ L K AL V+ +M P + + L
Sbjct: 143 ELVRVFKEFSFSP--TVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200
Query: 178 TDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVF------EVMPQR 231
G++ V ++ Q+ + D + ++ Y G + D VF + +
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSG-NVDKAMVFAKETESSLGLEL 259
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
NVV++N+LI G++ G V R M + G+ + +T T+
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMS-ERGVSRNVVTYTS----------------- 301
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTS----WNTMLAGYSI 347
L+ Y K G + + VF+ ++ K L + + ++ GY
Sbjct: 302 ------------------LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 348 NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEH 407
GQI A+ + D MI +R + SL++G SG E ++ F+ M D+ ++P
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403
Query: 408 YACLVDILGRSGKLDEALTVARNMPMK 434
Y LVD R+G +DEAL + M K
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQK 430
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 157/397 (39%), Gaps = 43/397 (10%)
Query: 37 LKSLCKSGKLEEALRLIESPNPTPY-QDEDISQLLHLCISRK-SLEHGQKLHQHLLHSKG 94
+K CK G +EEA + E D+ + +L R + ++H +++
Sbjct: 303 IKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGV 362
Query: 95 RVIENPTLKSKLITLYSVCGRLDEARRVF---QDEEEDPPESVWVAMAIGYSRNRLSKEA 151
R N T+ + LI Y G+L EA ++F D P + + GY R EA
Sbjct: 363 RT--NTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 152 LLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRF 211
L + M + V P +++ LK + +G ++ + KR AD++ + LL
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 212 YVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWIT 271
+ G + ++++E NV L G+ IT
Sbjct: 481 LFKLGDFNEAMKLWE-----NV---------------------------LARGLLTDTIT 508
Query: 272 LTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME 331
L ++ ++ ++ KEI + K AL Y K G++ V + ME
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 332 SK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTS 387
K + +NT+++G + K DL E+ + P T+ +L++G + G+
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 388 EGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
+ M + G+ ++ + + + L R K+DEA
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA 665
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 316 KCGSIGYCKKVFDGMESKDL-----TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDG 370
K G + +K+F + S D ++ ++ G +I G I KA L DEM I P+
Sbjct: 731 KAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNI 790
Query: 371 ITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARN 430
+T+ +L+ G G Q+ + + G+ P+ Y L+D L +SG + EA+ +
Sbjct: 791 VTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEK 850
Query: 431 MPMKLSGSIWGS 442
M K G + GS
Sbjct: 851 MIEK--GLVRGS 860
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 112/529 (21%), Positives = 211/529 (39%), Gaps = 105/529 (19%)
Query: 114 GRLDEARRVFQDEEED--PPESVWVAMAI-GYSRNRLSKEALLVYRDMLARSVEPGNFAF 170
G+++EA ++F EE P V I G EA + M+ R +EP +
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333
Query: 171 SVALKACTDVGDSRVGRA--IHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVM 228
S+ +K T R+G A + ++ K+ + +V N L+ ++E G + + ++M
Sbjct: 334 SILVKGLTRA--KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 229 PQRNVV----SWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL-------- 276
+ + ++NTLI G+ G+ + M L G + + T+V+
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM-LSIGFNVNQGSFTSVICLLCSHLM 450
Query: 277 -----------------PICAQLTALHSGKEIHG----------QIVKSGKKADRPLLNA 309
P LT L SG HG Q + G D NA
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 310 LMDMYAKCGSIGYCKKVFDGMESK----DLTSWNTMLAG--------------------- 344
L+ + G + ++ + + D S+NT+++G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 345 -------YSI-------NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQ 390
YSI ++E+AI +D+ R+ + PD T+ ++ GC + T EGQ
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 391 KFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK---LSGSIWGSLLNSC 447
+FF+ M VQP+ Y L+ RSG+L AL + +M K + + + SL+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 448 RLDGNVSLAETAAE--RLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
+ V A+ E R+ +EP N++ + +G ++ +M+ + + ++
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEP----------NVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 506 AGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNT 554
+ + +T + GG + + E + L N +++ G +P++
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTE----ASRLLNEMREKGIVPDS 785
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/484 (21%), Positives = 191/484 (39%), Gaps = 77/484 (15%)
Query: 87 QHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNR 146
+ L+ SKG + + T + LI Y G+ D A R+ ++ ++IG++ N+
Sbjct: 388 KDLMVSKGLSLTSSTYNT-LIKGYCKNGQADNAERLLKE-----------MLSIGFNVNQ 435
Query: 147 --------------LSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQ 192
+ AL +ML R++ PG + + G + Q
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 193 LAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNV----VSWNTLIAGFSGQGK 248
+ D +NALL E G + R+ + + R VS+NTLI+G G+ K
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 249 VFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLN 308
+ E F +K G+ T + ++ + + + ++G D +
Sbjct: 556 LDEAF-MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 309 ALMDMYAKCGSIGYCKKVFDGMESKDL----TSWNTMLAGYSINGQIEKAIDLFDEMIRS 364
++D K ++ FD M SK++ +N ++ Y +G++ A++L ++M
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 365 NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
I P+ T+ SL+ G S E + F M+ G++P++ HY L+D G+ G++ +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 425 LTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADA 484
+ R M K + PN VM+ D
Sbjct: 735 ECLLREMHSK------------------------------NVHPNKITYTVMIGGYARDG 764
Query: 485 GMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGG-------SSDFRSSAEYLKI 537
+ E + + EM +GI D+ I K+ I+ ++ G SD + A ++
Sbjct: 765 NVTEASRLLNEMRE-KGIVPDS----ITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEG 819
Query: 538 WNAL 541
WN L
Sbjct: 820 WNKL 823
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 148/375 (39%), Gaps = 57/375 (15%)
Query: 33 LNPTLKSLCKSGKLEEALRL-IESPNPTPYQDEDISQ-LLHLCISRKSLEHGQKLHQHLL 90
L + LCK GK +AL L + N D S LLH L+ ++ + +L
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 91 HSKGRVIENPTLKSKLITLYSVCGR--LDEARRVFQDEEED----PPESVWVAMAIGYSR 144
+G V++ + + LI+ CG+ LDEA +F DE P + + G
Sbjct: 533 -GRGCVMDRVSYNT-LIS--GCCGKKKLDEAF-MFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 145 NRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVV 204
+EA+ + D + P + +SV + C + G+ ++ ++ + + VV
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 205 NNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQ 260
N L+R Y G L + E M + N ++ +LI G S +V E F M+
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 261 LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI 320
+ EG+ + H AL+D Y K G +
Sbjct: 708 M-EGL---------------EPNVFH--------------------YTALIDGYGKLGQM 731
Query: 321 GYCKKVFDGMESKDL----TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
+ + M SK++ ++ M+ GY+ +G + +A L +EM I PD IT+
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 377 LSGCSHSGLTSEGQK 391
+ G G E K
Sbjct: 792 IYGYLKQGGVLEAFK 806
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 120/284 (42%), Gaps = 24/284 (8%)
Query: 295 IVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME----SKDLTSWNTMLAGYSINGQ 350
+V G D L ++ + K G + K+F ME + ++ ++NT++ G + G+
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 351 IEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYAC 410
++A ++M+ + P IT+ L+ G + + + M G P++ Y
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 411 LVDILGRSGKLDEALTVARNMPMK---LSGSIWGSLLNSCRLDGNVSLAETAAERLFEIE 467
L+D +G L++A+ + M K L+ S + +L+ +G AE + + I
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 468 PN-NAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSS 526
N N G++ + + M++ R M +R + G + T + G
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG---------LLTTLISGLC 481
Query: 527 DFRSSAEYLKIWNALSNAIKDSGYIPNT---DVVLHDINEEMKV 567
++ L++W N G++ +T + +LH + E K+
Sbjct: 482 KHGKHSKALELWFQFLN----KGFVVDTRTSNALLHGLCEAGKL 521
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 308 NALMDMYAKCGSIGYCKKVFDGM---ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRS 364
N L+ + C + FD + S D+ + T + + G++E+A+ LF +M +
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 365 NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
+ P+ +TF +++ G G E F M + G++P+L Y+ LV L R+ ++ +A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 425 LTVARNMPMK-------LSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVML 477
V + M K + ++ S + + L+ + + + + + + Y L
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL---TSSTYNTL 406
Query: 478 SNIYADAGMWEGVKR-VREMMAI 499
Y G + +R ++EM++I
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSI 429
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 112/529 (21%), Positives = 211/529 (39%), Gaps = 105/529 (19%)
Query: 114 GRLDEARRVFQDEEED--PPESVWVAMAI-GYSRNRLSKEALLVYRDMLARSVEPGNFAF 170
G+++EA ++F EE P V I G EA + M+ R +EP +
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333
Query: 171 SVALKACTDVGDSRVGRA--IHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVM 228
S+ +K T R+G A + ++ K+ + +V N L+ ++E G + + ++M
Sbjct: 334 SILVKGLTRA--KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 229 PQRNVV----SWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL-------- 276
+ + ++NTLI G+ G+ + M L G + + T+V+
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM-LSIGFNVNQGSFTSVICLLCSHLM 450
Query: 277 -----------------PICAQLTALHSGKEIHG----------QIVKSGKKADRPLLNA 309
P LT L SG HG Q + G D NA
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 310 LMDMYAKCGSIGYCKKVFDGMESK----DLTSWNTMLAG--------------------- 344
L+ + G + ++ + + D S+NT+++G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 345 -------YSI-------NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQ 390
YSI ++E+AI +D+ R+ + PD T+ ++ GC + T EGQ
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 391 KFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK---LSGSIWGSLLNSC 447
+FF+ M VQP+ Y L+ RSG+L AL + +M K + + + SL+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 448 RLDGNVSLAETAAE--RLFEIEPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
+ V A+ E R+ +EP N++ + +G ++ +M+ + + ++
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEP----------NVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 506 AGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKIWNALSNAIKDSGYIPNT 554
+ + +T + GG + + E + L N +++ G +P++
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTE----ASRLLNEMREKGIVPDS 785
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/484 (21%), Positives = 191/484 (39%), Gaps = 77/484 (15%)
Query: 87 QHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPESVWVAMAIGYSRNR 146
+ L+ SKG + + T + LI Y G+ D A R+ ++ ++IG++ N+
Sbjct: 388 KDLMVSKGLSLTSSTYNT-LIKGYCKNGQADNAERLLKE-----------MLSIGFNVNQ 435
Query: 147 --------------LSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQ 192
+ AL +ML R++ PG + + G + Q
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 193 LAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQRNV----VSWNTLIAGFSGQGK 248
+ D +NALL E G + R+ + + R VS+NTLI+G G+ K
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 249 VFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLN 308
+ E F +K G+ T + ++ + + + ++G D +
Sbjct: 556 LDEAF-MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 309 ALMDMYAKCGSIGYCKKVFDGMESKDL----TSWNTMLAGYSINGQIEKAIDLFDEMIRS 364
++D K ++ FD M SK++ +N ++ Y +G++ A++L ++M
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 365 NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
I P+ T+ SL+ G S E + F M+ G++P++ HY L+D G+ G++ +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 425 LTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVMLSNIYADA 484
+ R M K + PN VM+ D
Sbjct: 735 ECLLREMHSK------------------------------NVHPNKITYTVMIGGYARDG 764
Query: 485 GMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGG-------SSDFRSSAEYLKI 537
+ E + + EM +GI D+ I K+ I+ ++ G SD + A ++
Sbjct: 765 NVTEASRLLNEMRE-KGIVPDS----ITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEG 819
Query: 538 WNAL 541
WN L
Sbjct: 820 WNKL 823
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 148/375 (39%), Gaps = 57/375 (15%)
Query: 33 LNPTLKSLCKSGKLEEALRL-IESPNPTPYQDEDISQ-LLHLCISRKSLEHGQKLHQHLL 90
L + LCK GK +AL L + N D S LLH L+ ++ + +L
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 91 HSKGRVIENPTLKSKLITLYSVCGR--LDEARRVFQDEEED----PPESVWVAMAIGYSR 144
+G V++ + + LI+ CG+ LDEA +F DE P + + G
Sbjct: 533 -GRGCVMDRVSYNT-LIS--GCCGKKKLDEAF-MFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 145 NRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVV 204
+EA+ + D + P + +SV + C + G+ ++ ++ + + VV
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 205 NNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQ 260
N L+R Y G L + E M + N ++ +LI G S +V E F M+
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 261 LKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSI 320
+ EG+ + H AL+D Y K G +
Sbjct: 708 M-EGL---------------EPNVFH--------------------YTALIDGYGKLGQM 731
Query: 321 GYCKKVFDGMESKDL----TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSL 376
+ + M SK++ ++ M+ GY+ +G + +A L +EM I PD IT+
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 377 LSGCSHSGLTSEGQK 391
+ G G E K
Sbjct: 792 IYGYLKQGGVLEAFK 806
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 120/284 (42%), Gaps = 24/284 (8%)
Query: 295 IVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGME----SKDLTSWNTMLAGYSINGQ 350
+V G D L ++ + K G + K+F ME + ++ ++NT++ G + G+
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 351 IEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYAC 410
++A ++M+ + P IT+ L+ G + + + M G P++ Y
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 411 LVDILGRSGKLDEALTVARNMPMK---LSGSIWGSLLNSCRLDGNVSLAETAAERLFEIE 467
L+D +G L++A+ + M K L+ S + +L+ +G AE + + I
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 468 PN-NAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSS 526
N N G++ + + M++ R M +R + G + T + G
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG---------LLTTLISGLC 481
Query: 527 DFRSSAEYLKIWNALSNAIKDSGYIPNT---DVVLHDINEEMKV 567
++ L++W N G++ +T + +LH + E K+
Sbjct: 482 KHGKHSKALELWFQFLN----KGFVVDTRTSNALLHGLCEAGKL 521
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 308 NALMDMYAKCGSIGYCKKVFDGM---ESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRS 364
N L+ + C + FD + S D+ + T + + G++E+A+ LF +M +
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 365 NIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
+ P+ +TF +++ G G E F M + G++P+L Y+ LV L R+ ++ +A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 425 LTVARNMPMK-------LSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVML 477
V + M K + ++ S + + L+ + + + + + + Y L
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL---TSSTYNTL 406
Query: 478 SNIYADAGMWEGVKR-VREMMAI 499
Y G + +R ++EM++I
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSI 429
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 192/480 (40%), Gaps = 94/480 (19%)
Query: 116 LDEARRVFQDEEEDPPESVWV----AMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFS 171
LD R++ +DE + + + + +R L E VY +ML V P + ++
Sbjct: 163 LDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYN 222
Query: 172 VALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMP-- 229
+ +G+ +++ + + D +L+ Y + +VF MP
Sbjct: 223 KMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282
Query: 230 --QRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL----------- 276
+RN V++ LI G ++ E +D F +++K+ F + TVL
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLF--VKMKDDECFPTVRTYTVLIKSLCGSERKS 340
Query: 277 --------------------------PICAQLTALHSGKEIHGQIVKSGKKADRPLLNAL 310
+C+Q +E+ GQ+++ G + NAL
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQ-CKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 311 MDMYAKCGSIGYCKKVFDGMESKDLT----SWNTMLAGYSINGQIEKAIDLFDEMIRSNI 366
++ Y K G I V + MES+ L+ ++N ++ GY + KA+ + ++M+ +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKV 458
Query: 367 RPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQP----------------------- 403
PD +T+ SL+ G SG + +LM D G+ P
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 404 ---SLEH---------YACLVDILGRSGKLDEALTVARNMPMK--LSGSI-WGSLLNSCR 448
SLE Y L+D ++GK+DEA + M K L S+ + +L++
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 449 LDGNVSLAETAAERLFEI--EPNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
DG + A E++ +I +P + + +++ + D R ++M++ G K DA
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS-SGTKPDA 637
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/485 (19%), Positives = 180/485 (37%), Gaps = 95/485 (19%)
Query: 34 NPTLKSLCKSGKLEEA----LRLIES---PNPTPYQDEDISQLLHLCISRKSLEHGQKLH 86
N + CK G +EEA +++E+ P+ Y S ++ C RK L+ K+
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYT----SLIMGYC-QRKDLDSAFKVF 276
Query: 87 QHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVF---QDEEEDPPESVWVAMAIGYS 143
+ R N + LI V R+DEA +F +D+E P + +
Sbjct: 277 NEMPLKGCR--RNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 144 RNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQV 203
+ EAL + ++M ++P ++V + + R + Q+ ++ + +
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 204 VNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGF---------------- 243
NAL+ Y + G D + V E+M R N ++N LI G+
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML 454
Query: 244 ---------------SGQGKVFETLDAFRAMQLKEGMGF---SWITLTTVLPICAQLTAL 285
GQ + A+R + L G W T T+++ + +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW-TYTSMIDSLCKSKRV 513
Query: 286 HSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT----SWNTM 341
++ + + G + + AL+D Y K G + + + M SK+ ++N +
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 342 LAGYSINGQIEKAIDL-----------------------------------FDEMIRSNI 366
+ G +G++++A L F +M+ S
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 367 RPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALT 426
+PD T+ + + G + + M++ GV P L Y+ L+ G G+ + A
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 427 VARNM 431
V + M
Sbjct: 694 VLKRM 698
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 156/394 (39%), Gaps = 27/394 (6%)
Query: 37 LKSLCKSGKLEEALRLIES-------PNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHL 89
+KSLC S + EAL L++ PN Y + L+ S+ E ++L +
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTY-----TVLIDSLCSQCKFEKARELLGQM 384
Query: 90 LHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEE---DPPESVWVAMAIGYSRNR 146
L KG ++ N + LI Y G +++A V + E P + + GY ++
Sbjct: 385 LE-KG-LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 147 LSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNN 206
+ K A+ V ML R V P ++ + G+ + + + R DQ
Sbjct: 443 VHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 207 ALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLK 262
+++ + + +F+ + Q+ NVV + LI G+ GKV E M K
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 263 EGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGY 322
+ S + +CA L + ++VK G + L+ K G +
Sbjct: 562 NCLPNSLTFNALIHGLCAD-GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 323 CKKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLS 378
F M S D ++ T + Y G++ A D+ +M + + PD T+ SL+
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 379 GCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLV 412
G G T+ M+D G +PS + L+
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 159/409 (38%), Gaps = 28/409 (6%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNP---TPYQDEDISQLLHLCISRKSLEHGQKLHQHLL 90
N + C+SG + A RL+ N P Q S + LC S++ +E L L
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR-VEEACDLFDSL- 523
Query: 91 HSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED---PPESVWVAMAIGYSRNRL 147
KG V N + + LI Y G++DEA + + P + A+ G +
Sbjct: 524 EQKG-VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNA 207
KEA L+ M+ ++P ++ + GD + Q+ + D
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 208 LLRFYVECGCSGDVLRVFEVMPQRNV----VSWNTLIAGFSGQGKVFETLDAFRAMQLKE 263
++ Y G D + M + V ++++LI G+ G+ D + M+
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR-DT 701
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYC 323
G S T L + L + GK+ K P L A+ +M +
Sbjct: 702 GCEPSQ---HTFLSLIKHLLEMKYGKQ----------KGSEPELCAMSNMMEFDTVVELL 748
Query: 324 KKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSN-IRPDGITFVSLLSGCSH 382
+K+ + + + S+ ++ G G + A +FD M R+ I P + F +LLS C
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 383 SGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
+E K + M G P LE L+ L + G+ + +V +N+
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 141/377 (37%), Gaps = 47/377 (12%)
Query: 41 CKSGKLEEALRLIE---SPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHSKGRVI 97
CK+GK++EA ++E S N P + L+H + L+ L + ++ ++
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLP-NSLTFNALIHGLCADGKLKEATLLEEKMV----KIG 597
Query: 98 ENPTLKSKLITLYSVC--GRLDEARRVFQD---EEEDPPESVWVAMAIGYSRNRLSKEAL 152
PT+ + I ++ + G D A FQ P + Y R + L
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR----EGRL 653
Query: 153 LVYRDMLAR----SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
L DM+A+ V P F +S +K D+G + + ++ E Q +L
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 209 LRFYVE-------------CGCSG-----DVLRVFEVMPQRNVV----SWNTLIAGFSGQ 246
++ +E C S V+ + E M + +V S+ LI G
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 247 GKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPL 306
G + F MQ EG+ S + +L C +L + ++ ++ G
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 307 LNALMDMYAKCGSIGYCKKVFDGMES----KDLTSWNTMLAGYSINGQIEKAIDLFDEMI 362
L+ K G VF + +D +W ++ G G +E +LF+ M
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893
Query: 363 RSNIRPDGITFVSLLSG 379
++ + T+ L+ G
Sbjct: 894 KNGCKFSSQTYSLLIEG 910
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 193/456 (42%), Gaps = 69/456 (15%)
Query: 96 VIENPTLKSKLITLYSVCGRLDEARRVF------QDEEEDPPESVWVAMAIGYSRNRLSK 149
V+ + TL + +I +Y+ G EA VF + D E + M Y + +L +
Sbjct: 476 VLSSTTLAA-VIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLE--YNVMIKAYGKAKLHE 532
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
+AL +++ M + P ++ + V + I A++ + A++
Sbjct: 533 KALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 210 RFYVECGCSGDVLRVFEVMPQRNV----VSWNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
YV G D + ++E M + V V + +LI GF+ G V E + FR M+ + G+
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMME-EHGV 651
Query: 266 GFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKK 325
+ I LT+++ +++ L + ++ ++ S D N+++ + A G + +
Sbjct: 652 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAES 711
Query: 326 VFDGMESK---DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSH 382
+F+ + K D+ S+ TM+ Y G +++AI++ +EM S + D +F +++ +
Sbjct: 712 IFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAA 771
Query: 383 SGLTSEGQKFFN-------LMQDYGVQPSLEHYACLVDILGRSGKLDEA---LTVARNMP 432
G SE + F+ L+ D+G + L +L + G EA L A N
Sbjct: 772 DGQLSECCELFHEMLVERKLLLDWGT------FKTLFTLLKKGGVPSEAVSQLQTAYNEA 825
Query: 433 MKLSG-----------SIWGSLLNSCR----------------------LDGNVSLAETA 459
L+ ++ L SC+ G++ +A A
Sbjct: 826 KPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKA 885
Query: 460 AERLFE--IEPNNAGNYVMLSNIYADAGMWEGVKRV 493
R+ E +EP+ L IY AGM EGVKRV
Sbjct: 886 YMRMQEKGLEPDIVTQ-AYLVGIYGKAGMVEGVKRV 920
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 184/452 (40%), Gaps = 56/452 (12%)
Query: 106 LITLYSVCGRLDEARRVFQDEEED--PPESVWVAMAI---GYSRNRLSKEALLVYRDMLA 160
LI LY GRL++A +F + + P ++V I G + E+LL + M
Sbjct: 311 LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLL--KKMEE 368
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
+ + P +++ L D GD + ++ K D V + A+L + +
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAE 428
Query: 221 VLRVFEVMPQRNVV----SWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL 276
V V M + ++ S ++ + +G V + F QL S TL V+
Sbjct: 429 VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLD--CVLSSTTLAAVI 486
Query: 277 PICAQLTALHSGKEI-HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK-- 333
+ A+ + + +G+ SG++ D N ++ Y K +F GM+++
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 334 --DLTSWNT-----------------------------------MLAGYSINGQIEKAID 356
D ++N+ M+A Y G + A+D
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606
Query: 357 LFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILG 416
L++ M ++ ++P+ + + SL++G + SG+ E ++F +M+++GVQ + L+
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS 666
Query: 417 RSGKLDEALTVARNMPMKLSG---SIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGN 473
+ G L+EA V M G + S+L+ C G VS AE+ L E + +
Sbjct: 667 KVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVIS 726
Query: 474 YVMLSNIYADAGMWEGVKRVREMMAIRGIKKD 505
+ + +Y GM + V E M G+ D
Sbjct: 727 FATMMYLYKGMGMLDEAIEVAEEMRESGLLSD 758
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 174/404 (43%), Gaps = 22/404 (5%)
Query: 34 NPTLKSLCKSGKLEEALRLIES-PNPTPYQDE-DISQLLHLCISRKSLEHGQKLHQHLLH 91
N +K+ K+ E+AL L + N + DE + L + ++ Q++ +L
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD 578
Query: 92 SKGRVIENPTLKS--KLITLYSVCGRLDEARRVFQDEEE---DPPESVWVAMAIGYSRNR 146
S + P K+ +I Y G L +A +++ E+ P E V+ ++ G++ +
Sbjct: 579 SGCK----PGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 147 LSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNN 206
+ +EA+ +R M V+ + + +KA + VG R ++ ++ + D +N
Sbjct: 635 MVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASN 694
Query: 207 ALLRFYVECGCSGDVLRVFEVMPQR---NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKE 263
++L + G + +F + ++ +V+S+ T++ + G G + E ++ M+ +
Sbjct: 695 SMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMR-ES 753
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKEI-HGQIVKSGKKADRPLLNALMDMYAKCG---- 318
G+ + V+ A L E+ H +V+ D L + K G
Sbjct: 754 GLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSE 813
Query: 319 SIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLS 378
++ + ++ E+K L + +S G A++ E+ I + + +++
Sbjct: 814 AVSQLQTAYN--EAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIY 871
Query: 379 GCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLD 422
S SG K + MQ+ G++P + A LV I G++G ++
Sbjct: 872 TYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVE 915
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 150/353 (42%), Gaps = 16/353 (4%)
Query: 93 KGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPES---VWVAMAIGYSRNRLSK 149
K V N + LI ++ G ++EA + F+ EE +S V ++ YS+ +
Sbjct: 613 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLE 672
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
EA VY M P A + L C D+G +I L ++ D + ++
Sbjct: 673 EARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMM 731
Query: 210 RFYVECGCSGDVLRVFEVMPQRNVVS----WNTLIAGFSGQGKVFETLDAFRAMQLKEGM 265
Y G + + V E M + ++S +N ++A ++ G++ E + F M ++ +
Sbjct: 732 YLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKL 791
Query: 266 GFSWITLTTVLPICAQ----LTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
W T T+ + + A+ + + + A L + M +YA ++
Sbjct: 792 LLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAY--ALE 849
Query: 322 YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCS 381
C+++ G ++ ++N ++ YS +G I+ A+ + M + PD +T L+
Sbjct: 850 SCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYG 909
Query: 382 HSGLTSEGQKFFNLMQDYG-VQPSLEHYACLVDILGRSGKLDEALTVARNMPM 433
+G+ EG K + +G ++PS + + D + + D A V + M +
Sbjct: 910 KAGMV-EGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEMSI 961
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%)
Query: 336 TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNL 395
+++NT++ Y G++ A +LF EM++S + D +TF +++ C G SE +
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 396 MQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
M++ G+ P + Y L+ + +G ++ AL R +
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKI 401
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 164/371 (44%), Gaps = 14/371 (3%)
Query: 75 SRKSLEHGQKLHQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED---PP 131
S++++ + + + +L S+ V N + LI + G +D A +F E P
Sbjct: 182 SKRNISFAENVFKEMLESQ--VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPN 239
Query: 132 ESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHA 191
+ + GY + R + + R M + +EP +++V + G + +
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 192 QLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQG 247
++ +R D+V N L++ Y + G L + M + +V+++ +LI G
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 248 KVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL 307
+ ++ M+++ G+ + T TT++ +Q ++ + ++ +G
Sbjct: 360 NMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 308 NALMDMYAKCGSIGYCKKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIR 363
NAL++ + G + V + M+ K D+ S++T+L+G+ + +++A+ + EM+
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 364 SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDE 423
I+PD IT+ SL+ G T E + M G+ P Y L++ G L++
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 424 ALTVARNMPMK 434
AL + M K
Sbjct: 539 ALQLHNEMVEK 549
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 162/384 (42%), Gaps = 43/384 (11%)
Query: 133 SVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVG-DSRVGRAIHA 191
SV+ + YSR L +AL + A PG +++ L A + +
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 192 QLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQG 247
++ + + N L+R + G L +F+ M + NVV++NTLI G+
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 248 KVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLL 307
K+ + R+M LK G+ + I+ V I+G + + G+ + +
Sbjct: 255 KIDDGFKLLRSMALK-GLEPNLISYNVV---------------ING-LCREGRMKEVSFV 297
Query: 308 NALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIR 367
L +M + GY S D ++NT++ GY G +A+ + EM+R +
Sbjct: 298 --LTEMNRR----GY---------SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 368 PDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTV 427
P IT+ SL+ +G + +F + M+ G+ P+ Y LVD + G ++EA V
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 428 ARNMP---MKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE--IEPNNAGNYVMLSNIYA 482
R M S + +L+N + G + A E + E + P+ +LS
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 483 DAGMWEGVKRVREMMAIRGIKKDA 506
+ E ++ REM+ +GIK D
Sbjct: 463 SYDVDEALRVKREMVE-KGIKPDT 485
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 156/380 (41%), Gaps = 30/380 (7%)
Query: 34 NPTLKSLCKSGKLEEALRLIES-------PNPTPYQDEDISQLLHLCISRKSLEHGQKLH 86
N ++ C +G ++ AL L + PN Y + + C RK ++ G KL
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN----TLIDGYCKLRK-IDDGFKL- 262
Query: 87 QHLLHSKGRVIENPTLKSKLITLYSVC--GRLDEARRVFQDEEE---DPPESVWVAMAIG 141
L S P L S + + +C GR+ E V + E + + G
Sbjct: 263 ---LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
Y + +AL+++ +ML + P ++ + + G+ Q+ R +
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFR 257
+ L+ + + G + RV M +VV++N LI G GK+ + +
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M+ ++G+ ++ +TVL + + + ++V+ G K D ++L+ + +
Sbjct: 440 DMK-EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 318 GSIGYCKKVFDGMES----KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITF 373
+++ M D ++ ++ Y + G +EKA+ L +EM+ + PD +T+
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 374 VSLLSGCSHSGLTSEGQKFF 393
L++G + T E ++
Sbjct: 559 SVLINGLNKQSRTREAKRLL 578
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/429 (18%), Positives = 171/429 (39%), Gaps = 72/429 (16%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQHLLH 91
N + LC+ G+++E ++ N Y ++++ L+ + +H +L
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML- 337
Query: 92 SKGRVIENPTLKSKLITLYSVC--GRLDEARRVFQDEEED----PPESVWVAMAIGYSRN 145
R P++ + ++S+C G ++ A F D+ P E + + G+S+
Sbjct: 338 ---RHGLTPSVITYTSLIHSMCKAGNMNRAME-FLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 146 RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN 205
EA V R+M F+ SV V
Sbjct: 394 GYMNEAYRVLREM-----NDNGFSPSV------------------------------VTY 418
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
NAL+ + G D + V E M ++ +VVS++T+++GF V E L R M +
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM-V 477
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
++G+ IT ++++ + +++ ++++ G D AL++ Y G +
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 322 YCKKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
++ + M K D+ +++ ++ G + + +A L ++ P +T+ +L+
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 378 SGCSH---------------SGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLD 422
CS+ G+ +E + F M +P Y ++ R+G +
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 423 EALTVARNM 431
+A T+ + M
Sbjct: 658 KAYTLYKEM 666
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 134/283 (47%), Gaps = 15/283 (5%)
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
+V+S++T++ G+ G++ + M+ ++G+ + +++ + ++ L +E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMK-RKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT----SWNTMLAGYSI 347
++++ G D + L+D + K G I K F M S+D+T ++ +++G+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 348 NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEH 407
G + +A LF EM + PD +TF L++G +G + + N M G P++
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 408 YACLVDILGRSGKLDEALTVARNM-PMKLSGSI--WGSLLNSCRLDGNVSLAETAAERLF 464
Y L+D L + G LD A + M + L +I + S++N GN+ E A + +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI---EEAVKLVG 515
Query: 465 EIEP----NNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIK 503
E E + Y L + Y +G + + + + M +G++
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 131/292 (44%), Gaps = 13/292 (4%)
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
EA + +M+ + + P ++ + GD R ++ RD D + A++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 210 RFYVECGCSGDVLRVFEVMPQRNV----VSWNTLIAGFSGQGKVFETLDAFRAMQ--LKE 263
+ + G + ++F M + + V++ LI G+ G + DAFR ++
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM---KDAFRVHNHMIQA 450
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYC 323
G + +T TT++ + L S E+ ++ K G + + N++++ K G+I
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 324 KKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG 379
K+ E+ D ++ T++ Y +G+++KA ++ EM+ ++P +TF L++G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 380 CSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
G+ +G+K N M G+ P+ + LV L A + ++M
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 134/283 (47%), Gaps = 15/283 (5%)
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
+V+S++T++ G+ G++ + M+ ++G+ + +++ + ++ L +E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMK-RKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT----SWNTMLAGYSI 347
++++ G D + L+D + K G I K F M S+D+T ++ +++G+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 348 NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEH 407
G + +A LF EM + PD +TF L++G +G + + N M G P++
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 408 YACLVDILGRSGKLDEALTVARNM-PMKLSGSI--WGSLLNSCRLDGNVSLAETAAERLF 464
Y L+D L + G LD A + M + L +I + S++N GN+ E A + +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI---EEAVKLVG 515
Query: 465 EIEP----NNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIK 503
E E + Y L + Y +G + + + + M +G++
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 131/292 (44%), Gaps = 13/292 (4%)
Query: 150 EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALL 209
EA + +M+ + + P ++ + GD R ++ RD D + A++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 210 RFYVECGCSGDVLRVFEVMPQRNV----VSWNTLIAGFSGQGKVFETLDAFRAMQ--LKE 263
+ + G + ++F M + + V++ LI G+ G + DAFR ++
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM---KDAFRVHNHMIQA 450
Query: 264 GMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYC 323
G + +T TT++ + L S E+ ++ K G + + N++++ K G+I
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 324 KKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG 379
K+ E+ D ++ T++ Y +G+++KA ++ EM+ ++P +TF L++G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 380 CSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
G+ +G+K N M G+ P+ + LV L A + ++M
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 157/347 (45%), Gaps = 31/347 (8%)
Query: 100 PTLKS--KLITLYSVCGRLDEARRV--------FQ-DEEEDPPESVWVAMAIGYSRNRLS 148
PT+ + L+ +S+ GR++ AR + FQ D + P W+ + R S
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMC-----NEGRAS 312
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
+ V R+M + P + ++++ ++ C++ GD + A ++ K+ N L
Sbjct: 313 E----VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 209 LR-FYVECGCSGDVLRVFEVMPQRNV---VSWNTLIAGFSGQGKVFETLDAFRAMQLKEG 264
+ ++E + + E+ + V V++N LI G+ G + A + +G
Sbjct: 369 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF-ALHDEMMTDG 427
Query: 265 MGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCK 324
+ + T T+++ + + E+ ++V G K D ++N LMD + G++
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAF 487
Query: 325 KVFDGME----SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGC 380
+ M+ + D ++N ++ G G+ E+A +L EM R I+PD I++ +L+SG
Sbjct: 488 SLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGY 547
Query: 381 SHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRS--GKLDEAL 425
S G T + M G P+L Y L+ L ++ G+L E L
Sbjct: 548 SKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEEL 594
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 33/272 (12%)
Query: 163 VEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVL 222
++P ++ ++ + G R I +++ + + D N +L + G + +VL
Sbjct: 256 IKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL 315
Query: 223 R-VFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQ 281
R + E+ + VS+N LI G S G + E A+R +K+GM ++ T T+
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDL-EMAFAYRDEMVKQGMVPTFYTYNTL------ 368
Query: 282 LTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTM 341
IHG +++ +A L+ + + S+ Y N +
Sbjct: 369 ---------IHGLFMENKIEAAEILIREIREKGIVLDSVTY----------------NIL 403
Query: 342 LAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGV 401
+ GY +G +KA L DEM+ I+P T+ SL+ T E + F + G+
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 402 QPSLEHYACLVDILGRSGKLDEALTVARNMPM 433
+P L L+D G +D A ++ + M M
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDM 495
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 199/487 (40%), Gaps = 31/487 (6%)
Query: 34 NPTLKSLCKSGKLEEALRLIESPNPTPYQDEDI---SQLLH-LCISRKSLEHGQKLHQHL 89
N L CK G+ + A+ L++ D D+ + L+H LC S + + G L + +
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGV-DADVCTYNMLIHDLCRSNR-IAKGYLLLRDM 329
Query: 90 LHSKGRVIE-NPTLKSKLITLYSVCGRLDEARRVFQDEEE---DPPESVWVAMAIGYSRN 145
+ R+I N + LI +S G++ A ++ + P + A+ G+
Sbjct: 330 ---RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386
Query: 146 RLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVN 205
KEAL ++ M A+ + P ++ V L + + R + ++ + ++
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
++ + G + + + M + ++V+++ LI GF G+ F+T
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR-FKTAKEIVCRIY 505
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
+ G+ + I +T++ C ++ L I+ ++ G D N L+ K G +
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 322 YCKKVFDGMESKDL----TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
++ M S + S++ ++ GY +G+ KA +FDEM + P T+ SLL
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSG 437
G G E +KF + Y L+ + +SG L +A+++ M +
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR--S 683
Query: 438 SIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYV---MLSNIYAD----AGMWEGV 490
+ S + + G +T LF E GN + ++ + D AG W+
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 743
Query: 491 KRVREMM 497
RE M
Sbjct: 744 IYFREQM 750
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 163/416 (39%), Gaps = 31/416 (7%)
Query: 37 LKSLCKSGKLEEA-------LRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHL 89
+ CK G+ + A R+ SPN Y S L++ C L+ ++++ +
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY-----STLIYNCCRMGCLKEAIRIYEAM 539
Query: 90 L---HSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED---PPESVWVAMAIGYS 143
+ H++ N L+T G++ EA + D P + + GY
Sbjct: 540 ILEGHTRDHFTFNV-----LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG 594
Query: 144 RNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQV 203
+ +A V+ +M P F + LK G R L D V
Sbjct: 595 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 654
Query: 204 VNNALLRFYVECGCSGDVLRVFEVMPQRNVV----SWNTLIAGFSGQGKVFETLDAFRAM 259
+ N LL + G + +F M QR+++ ++ +LI+G +GK + +
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEA 714
Query: 260 QLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGS 319
+ + + + + T + + +G Q+ G D NA++D Y++ G
Sbjct: 715 EARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGK 774
Query: 320 IGYCKKVFDGMESKD----LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVS 375
I + M +++ LT++N +L GYS + + L+ +I + I PD +T S
Sbjct: 775 IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 834
Query: 376 LLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
L+ G S + G K GV+ + L+ +G+++ A + + M
Sbjct: 835 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVM 890
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 11/254 (4%)
Query: 206 NALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQL 261
NA+L V+ G V + M +R +V ++N LI +G FE
Sbjct: 202 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGS-FEKSSYLMQKME 260
Query: 262 KEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIG 321
K G + +T TVL + + E+ + G AD N L+ + I
Sbjct: 261 KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIA 320
Query: 322 YCKKVFDGMESKDL----TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLL 377
+ M + + ++NT++ G+S G++ A L +EM+ + P+ +TF +L+
Sbjct: 321 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380
Query: 378 SGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSG 437
G G E K F +M+ G+ PS Y L+D L ++ + D L M MK +G
Sbjct: 381 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD--LARGFYMRMKRNG 438
Query: 438 SIWGSLLNSCRLDG 451
G + + +DG
Sbjct: 439 VCVGRITYTGMIDG 452
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 179/426 (42%), Gaps = 46/426 (10%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDIS--QLLHLCISRKSLEHGQKLHQHLL 90
L ++ LC+ G++E++ +LI+ + + E + +++ + ++ + + + +
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK--V 284
Query: 91 HSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEEDPPES---VWVAMAIGYSRNRL 147
K V+ N + L+ L G++ +A ++F + E ES V+ ++ R
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 148 SKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNA 207
K A L++ ++ + + P ++ + + VG+ + ++ + QVV
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV--- 401
Query: 208 LLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGF 267
+NTLI G+ +G V E + M+ K G
Sbjct: 402 ----------------------------FNTLIDGYCRKGMVDEASMIYDVMEQK-GFQA 432
Query: 268 SWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVF 327
T T+ +L K+ ++++ G K L+D+Y K G++ K++F
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 328 DGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHS 383
M SK + ++N M+ Y G+I++A L M + + PD T+ SL+ G +
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIA 552
Query: 384 GLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK---LSGSIW 440
E + F+ M G+ + Y ++ L ++GK DEA + M K + ++
Sbjct: 553 DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVY 612
Query: 441 GSLLNS 446
+L+ S
Sbjct: 613 TALIGS 618
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 120/284 (42%), Gaps = 13/284 (4%)
Query: 233 VVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIH 292
V S ++ G +G+V ++ + +K G+ T T++ + + +
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVK-GIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 293 GQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK----DLTSWNTMLAGYSIN 348
+ K G ++ LM++ K G + +K+FD M + D+ + ++++
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHY 408
G +++A LFDE+ + P T+ +L+ G G + N MQ GV + +
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 409 ACLVDILGRSGKLDEALTVARNMPMK-LSGSIWG-SLLNSCRLDGNVSLAETAAERLFEI 466
L+D R G +DEA + M K ++ + + SC + + A + LF +
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF--NRLKRYDEAKQWLFRM 460
Query: 467 EPNNAG----NYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
+Y L ++Y G E KR+ M+ +G++ +A
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 198/465 (42%), Gaps = 39/465 (8%)
Query: 66 ISQLLHLCISRKSLEHGQKLHQHLLHSKGRVIE-NPTLKSKLITLYSVCGRLDEARRVFQ 124
+ +L C LE K+ L K R IE + + LI +S G+++EARR
Sbjct: 241 FNTMLDSCFKAGDLERVDKI---WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 125 DEEED----PPESVWVAMAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDV 180
D P S + + GY + L +A V +ML + P +++ + A D
Sbjct: 298 DMRRSGFAVTPYS-FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 181 GDSRVGRAIHAQLAKRDEEADQVVNNALLRF--YVECGCSGDVLRVFEVMPQRNVVSWNT 238
G R + + +A D + + + ++ +VE D LR ++ P ++V++NT
Sbjct: 357 GRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHP--SIVTYNT 414
Query: 239 LIAGFSGQGKVFETLDAFRAMQLKEGMGFSWI-----TLTTVLPICAQLTALHSGKEIHG 293
LI G G L+ A +LKE M I T TT++ + L E++
Sbjct: 415 LIDGLCESG----NLEG--AQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468
Query: 294 QIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM-----ESKDLTSWNTMLAGYSIN 348
++++ G K D + G ++ + M + DLT +N + G
Sbjct: 469 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 528
Query: 349 GQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHY 408
G + KAI+ ++ R + PD +T+ +++ G +G + ++ M + PS+ Y
Sbjct: 529 GNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY 588
Query: 409 ACLVDILGRSGKLDEALTVARNMP---MKLSGSIWGSLLNSCRLDGNVSLAETAAERLFE 465
L+ ++G+L++A + M ++ + +LL GN+ + A L +
Sbjct: 589 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI---DEAYRYLCK 645
Query: 466 IE----PNNAGNYVMLSNIYADAGMWEGVKRVREMMAIRGIKKDA 506
+E P N +Y ML + D WE V ++ + M + I+ D
Sbjct: 646 MEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDG 690
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 126/300 (42%), Gaps = 11/300 (3%)
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
Y++ ++++ LL + M+ + P ++ LK D A++ + +
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEV---MPQRNV----VSWNTLIAGFSGQGKVFETLD 254
+ N +L C +GD+ RV ++ M +RN+ V++N LI GFS GK+ E
Sbjct: 238 VITFNTMLD---SCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKM-EEAR 293
Query: 255 AFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMY 314
F + G + + ++ + + +++ +G N +
Sbjct: 294 RFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL 353
Query: 315 AKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFV 374
G I +++ M + D+ S+NT++ GY G+ +A LFD++ +I P +T+
Sbjct: 354 CDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413
Query: 375 SLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
+L+ G SG Q+ M + P + Y LV ++G L A V M K
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 156/362 (43%), Gaps = 29/362 (8%)
Query: 34 NPTLKSLCKSGKLEEALRLIES---PNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLL 90
N + +LC G++++A L+ S P+ Y + L+H I + G+ + LL
Sbjct: 347 NIYICALCDFGRIDDARELLSSMAAPDVVSY-----NTLMHGYI-----KMGKFVEASLL 396
Query: 91 HSKGRVIE-NPTLKSKLITLYSVC--GRLDEARRVFQDEEED---PPESVWVAMAIGYSR 144
R + +P++ + + +C G L+ A+R+ ++ P + + G+ +
Sbjct: 397 FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456
Query: 145 NRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEA-DQV 203
N A VY +ML + ++P +A++ +GDS +H ++ D A D
Sbjct: 457 NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLT 516
Query: 204 VNNALLRFYVECGCSGDVL----RVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAM 259
+ N + + G + ++F V + V++ T+I G+ G+ + + M
Sbjct: 517 IYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM 576
Query: 260 QLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGS 319
L++ + S IT ++ A+ L + ++ K G + + NAL+ K G+
Sbjct: 577 -LRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN 635
Query: 320 IGYCKKVFDGMESKDL----TSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVS 375
I + ME + + S+ +++ + E+ + L+ EM+ I PDG T +
Sbjct: 636 IDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRA 695
Query: 376 LL 377
L
Sbjct: 696 LF 697
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/478 (20%), Positives = 206/478 (43%), Gaps = 72/478 (15%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHS 92
LN L C ++ EA+ L++ YQ + ++ +L HG L QH S
Sbjct: 148 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPD--------TVTFTTLVHG--LFQHNKAS 197
Query: 93 KG-RVIENPTLKS---KLITLYSVC------GRLDEARRVFQDEEEDPPES---VWVAMA 139
+ ++E +K L+T +V G D A + E+ E+ ++ +
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 140 IGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEE 199
G + + +A ++ M + ++P F ++ + + G + + + +++
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 200 ADQVVNNALLRFYVECGCSGDVLRVFEVMPQR-----NVVSWNTLIAGFSGQGKVFETLD 254
D V NAL+ +V+ G + ++++ M + +VV++NTLI GF +V E ++
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 255 AFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMY 314
FR M + G+ + +T TT++ Q + + + Q+V G D
Sbjct: 378 VFREMS-QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD----------- 425
Query: 315 AKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFV 374
+ ++N +L G NG +E A+ +F+ M + +++ D +T+
Sbjct: 426 --------------------IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 375 SLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA----LTVARN 430
+++ +G +G F + GV+P++ Y ++ R G +EA + + +
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 431 MPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIE----PNNAGNYVMLSNIYADA 484
P+ SG+ + +L+ + DG+ + +AE + E+ +A + +++N+ D
Sbjct: 526 GPLPNSGT-YNTLIRARLRDGDEA---ASAELIKEMRSCGFAGDASTFGLVTNMLHDG 579
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 89/197 (45%), Gaps = 5/197 (2%)
Query: 232 NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEI 291
++V+ N+L+ GF ++ E + A ++ G +T TT++ Q +
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAV-ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 292 HGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES----KDLTSWNTMLAGYSI 347
++V G + D A+++ K G + + ME D+ +NT++ G
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 348 NGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEH 407
++ A DLF++M I+PD T+ L+S + G S+ + + M + + P L
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 408 YACLVDILGRSGKLDEA 424
+ L+D + GKL EA
Sbjct: 323 FNALIDAFVKEGKLVEA 339
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 335 LTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFN 394
+ + N++L G+ +I +A+ L D+M+ +PD +TF +L+ G SE
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 204
Query: 395 LMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
M G QP L Y +++ L + G+ D AL + M
Sbjct: 205 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 170/386 (44%), Gaps = 24/386 (6%)
Query: 129 DPPESVWVAMAIG-YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGR 187
+P + + + G + ++S+ +LV R M+ +P ++ + GD+ +
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDR-MVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 188 AIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGF 243
+ ++ +R+ +AD + ++ GC + +F+ M + +VV++N+L+ G
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 244 SGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKAD 303
GK + + M +E + + IT +L + + L E++ +++ G +
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 304 RPLLNALMDMYAKCGSIGYCKKVFDGME----SKDLTSWNTMLAGYSINGQIEKAIDLFD 359
N LMD Y + + D M S D+ ++ +++ GY + +++ + +F
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 360 EMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSG 419
+ + + + +T+ L+ G SG ++ F M +GV P + Y L+D L +G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 420 KLDEALTVARNM---PMKLSGSIWGSLLNSCRLDGNVSLAETAAERLF------EIEPNN 470
KL++AL + ++ M L ++ +++ G V A LF ++PN
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE----DAWNLFCSLPCKGVKPNV 508
Query: 471 AGNYVMLSNIYADAGMWEGVKRVREM 496
VM+S + + E +R+M
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKM 534
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 148/326 (45%), Gaps = 14/326 (4%)
Query: 116 LDEARRVFQDEEEDPPESVWVAMAI--GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVA 173
LD R++ EE + V+ I R+ A+ ++++M + ++ ++
Sbjct: 213 LDLLRKM---EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 174 LKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDVLRVFEVMPQR-- 231
++ G G + + R+ + + N LL +V+ G + +++ M R
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 232 --NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGK 289
N++++NTL+ G+ Q ++ E + M ++ +T T+++ + + G
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLM-VRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 290 EIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMES----KDLTSWNTMLAGY 345
++ I K G A+ + L+ + + G I +++F M S D+ ++ +L G
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 346 SINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSL 405
NG++EKA+++F+++ +S + + + +++ G G + F + GV+P++
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 406 EHYACLVDILGRSGKLDEALTVARNM 431
Y ++ L + G L EA + R M
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKM 534
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 307 LNALMDMYAKCGSIGYCKKVFD-----GMESKDLTSWNTMLAGYSINGQIEKAIDLFDEM 361
LN +++ + +C + V G E D T++NT++ G + G++ +A+ L D M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEP-DTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 362 IRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKL 421
+ + +PD +T+ S+++G SG TS M++ V+ + Y+ ++D L R G +
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 422 DEALTVARNMP---MKLSGSIWGSLLNS-CRL----DGNVSLAETAAERLFEIEPNNAGN 473
D A+++ + M +K S + SL+ C+ DG + L + + EI PN
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR---EIVPNVITF 301
Query: 474 YVMLSNIYADAGMWEGVKRVREMMAIRGI 502
V+L + + E + +EM+ RGI
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMIT-RGI 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 105/275 (38%), Gaps = 73/275 (26%)
Query: 223 RVFEVMPQRNVVSWNTLIAGFSGQGKVFE------------------------------- 251
+V ++ + + ++NTLI G +GKV E
Sbjct: 148 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 252 ----TLDAFRAMQLKEGMGFSWITLTTVLPIC--------AQLTALHSGKEIHGQIV--- 296
LD R M+ + + T + +C L K I +V
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 297 -------KSGKKADRPLL----------------NALMDMYAKCGSIGYCKKVFDGMESK 333
K+GK D LL N L+D++ K G + +++ M ++
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 334 ----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEG 389
++ ++NT++ GY + ++ +A ++ D M+R+ PD +TF SL+ G +G
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 390 QKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
K F + G+ + Y+ LV +SGK+ A
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 114/259 (44%), Gaps = 23/259 (8%)
Query: 206 NALLRFYVECGCSGDVLRVFEVM----PQRNVVSWNTLIAGFSGQG----KVFETLDAFR 257
+L Y G + +FE M P +V++N ++ F G K+ LD R
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
+ +G+ F T +TVL CA+ L KE ++ G + NAL+ ++ K
Sbjct: 274 S----KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
Query: 318 GSIGYCKKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITF 373
G V ME D ++N ++A Y G ++A + + M + + P+ IT+
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY 389
Query: 374 VSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPM 433
+++ +G E K F M++ G P+ Y ++ +LG+ + +E + + + M
Sbjct: 390 TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD--M 447
Query: 434 KLSG-----SIWGSLLNSC 447
K +G + W ++L C
Sbjct: 448 KSNGCSPNRATWNTMLALC 466
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 178/474 (37%), Gaps = 84/474 (17%)
Query: 34 NPTLKSLCKSGKLEEALRLIES--PNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLH 91
N L+ K+G EAL +++ N P ++L+ + R ++
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYV-RAGFSKEAAGVIEMMT 378
Query: 92 SKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED---PPESVWVAMAIGYSRNRLS 148
KG V+ N + +I Y G+ DEA ++F +E P + A+ + S
Sbjct: 379 KKG-VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 149 KEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNAL 208
E + + DM + P ++ L C + G + + ++ E D+ N L
Sbjct: 438 NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 209 LRFYVECGCSGDVLRVFEVMPQRN----VVSWNTLIAGFSGQG--------------KVF 250
+ Y CG D +++ M + V ++N L+ + +G K F
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 251 ETLDAFRAMQL-------------------KEGMGF-SWITLTTVLPICAQLTALHSGKE 290
+ + ++ L KEG F SW+ L T+L + AL +
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617
Query: 291 IHGQIVKSGKKADRPLLNA-----------------------------------LMDMYA 315
K G K D + N+ LMDMY
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYV 677
Query: 316 KCGSIGYCKKVFDGMESK----DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGI 371
+ G +++ +E DL S+NT++ G+ G +++A+ + EM IRP
Sbjct: 678 RRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 372 TFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEAL 425
T+ + +SG + G+ +E + M +P+ + +VD R+GK EA+
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 139/343 (40%), Gaps = 13/343 (3%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEEDPPESVWVA----MAIGYSRNRLSKEALLVYRDML 159
+ ++ YS G+ ++A +F+ +E P V + + R ++ L V +M
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMR 273
Query: 160 ARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSG 219
++ ++ F S L AC G R + A+L E V NALL+ + + G
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYT 333
Query: 220 DVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTV 275
+ L V + M + + V++N L+A + G E M K+G+ + IT TTV
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT-KKGVMPNAITYTTV 392
Query: 276 LPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK-- 333
+ + ++ + ++G + NA++ + K K+ M+S
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 334 --DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
+ +WNTMLA G + +F EM PD TF +L+S G + K
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMPMK 434
+ M G + Y L++ L R G V +M K
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK 555
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 123/322 (38%), Gaps = 85/322 (26%)
Query: 334 DLTSWNTMLAGYSINGQIEKAIDLF----------------------------------- 358
D+ ++ T+L YS G+ EKAIDLF
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 359 -DEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGR 417
DEM ++ D T ++LS C+ GL E ++FF ++ G +P Y L+ + G+
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 418 SGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEIEPNNAGNYVML 477
+G EAL+V + M NSC P ++ Y L
Sbjct: 329 AGVYTEALSVLKEMEE-----------NSC--------------------PADSVTYNEL 357
Query: 478 SNIYADAGMWEGVKRVREMMAIRGIKKDAGCSWIQIKQRIHTFVAGGSSDFRSSAEYLKI 537
Y AG + V EMM +G+ +A I I + G D E LK+
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNA----ITYTTVIDAYGKAGKED-----EALKL 408
Query: 538 WNALSNAIKDSGYIPNTDVVLHDINEEMKVMWVCGHSERLAAVFALIHTGAGMPIRITKN 597
+ ++ K++G +PNT N + ++ S + + + + P R T N
Sbjct: 409 FYSM----KEAGCVPNTCTY----NAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWN 460
Query: 598 LRVCVDCHSWM-KAVSRVTRRL 618
+ + + M K V+RV R +
Sbjct: 461 TMLALCGNKGMDKFVNRVFREM 482
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 127/340 (37%), Gaps = 48/340 (14%)
Query: 108 TLYSVCGR--LDE-ARRVFQDEEE---DPPESVWVAMAIGYSRNRLSKEALLVYRDMLAR 161
T+ ++CG +D+ RVF++ + +P + + Y R +A +Y +M
Sbjct: 461 TMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA 520
Query: 162 SVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGDV 221
++ L A GD R G + + + + + + + +L+ Y + G +
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGI 580
Query: 222 LRVFEVMPQRNVV-SWNTLIAGFSGQGKVFETLDAFRAMQL--KEGMGFSWITLTTVLPI 278
R+ + + + SW L K + RA L K G + ++L I
Sbjct: 581 ERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSI 640
Query: 279 CAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESKDLT-- 336
+ + I I + G D N+LMDMY + G +++ +E L
Sbjct: 641 FTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 700
Query: 337 -------------------------------------SWNTMLAGYSINGQIEKAIDLFD 359
++NT ++GY+ G + D+ +
Sbjct: 701 LVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIE 760
Query: 360 EMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDY 399
M +++ RP+ +TF ++ G +G SE F + ++ +
Sbjct: 761 CMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTF 800
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 158/376 (42%), Gaps = 50/376 (13%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEE---DPPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
+K+ L+ G++D A + E+ +P + M + + R + A ++ +ML
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
+ +EP NF +S+ + D + + Q+ + EA++V+ N ++ + G +
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 221 VLRVFEVMPQR-----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTV 275
+ + + + + S+N++I GF G ++ +R M + G + +T T++
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS-ENGKSPNVVTFTSL 631
Query: 276 LPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMD-------------MYAKCGSIG- 321
+ + + E+ ++ K D P AL+D ++++ +G
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL 691
Query: 322 --------------------------YCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAI 355
Y K V DG+ S DL ++ TM+ G +G I A
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI-SCDLFTYTTMIDGLLKDGNINLAS 750
Query: 356 DLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDIL 415
DL+ E++ I PD I + L++G S G + K M+ V P++ Y+ ++
Sbjct: 751 DLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGH 810
Query: 416 GRSGKLDEALTVARNM 431
R G L+EA + M
Sbjct: 811 HREGNLNEAFRLHDEM 826
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 109/247 (44%), Gaps = 9/247 (3%)
Query: 141 GYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEA 200
G+ + + A+ YR+M P F+ + + + ++ + +
Sbjct: 599 GFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKL 658
Query: 201 DQVVNNALLRFYVECGCSGDVLRVFEVMPQ----RNVVSWNTLIAGFSGQGKVFETLDAF 256
D AL+ + + +F +P+ NV +N+LI+GF GK+ +D +
Sbjct: 659 DLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLY 718
Query: 257 RAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAK 316
+ M + +G+ T TT++ + ++ +++ +++ G D L L++ +K
Sbjct: 719 KKM-VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Query: 317 CGSIGYCKKVFDGMESKDLTS----WNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGIT 372
G K+ + M+ KD+T ++T++AG+ G + +A L DEM+ I D
Sbjct: 778 KGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTV 837
Query: 373 FVSLLSG 379
F L+SG
Sbjct: 838 FNLLVSG 844
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/368 (18%), Positives = 149/368 (40%), Gaps = 17/368 (4%)
Query: 104 SKLITLYSVCGRLDEARRVFQDEEED---PPESVWVAMAIGYSRNRLSKEALLVYRDMLA 160
+ L+ Y L +A +F EE+ P + ++ M + +N ++A+ Y M +
Sbjct: 349 TSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS 408
Query: 161 RSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQVVNNALLRFYVECGCSGD 220
+ P + ++ C I + A + N + + + G
Sbjct: 409 VRIAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDA 467
Query: 221 VLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTVL 276
++M Q+ NVV +N ++ + F M L++G+ + T + ++
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM-LEKGLEPNNFTYSILI 526
Query: 277 PICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGM-----E 331
+ + ++ Q+ S +A+ + N +++ K G K++ +
Sbjct: 527 DGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRY 586
Query: 332 SKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
S TS+N+++ G+ G + A++ + EM + P+ +TF SL++G S +
Sbjct: 587 SMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALE 646
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNMP---MKLSGSIWGSLLNSCR 448
+ M+ ++ L Y L+D + + A T+ +P + + S++ SL++ R
Sbjct: 647 MTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR 706
Query: 449 LDGNVSLA 456
G + A
Sbjct: 707 NLGKMDAA 714
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/371 (18%), Positives = 151/371 (40%), Gaps = 47/371 (12%)
Query: 144 RNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQL-AKRDEEADQ 202
R R +EA+ ++R +++R EP FS+A++A D + + ++ K A Q
Sbjct: 251 RERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQ 310
Query: 203 VVNNALLRFYVECGCSGDVLRVFEVMP----QRNVVSWNTLIAGFSGQGKVFETLDAFRA 258
+++ +V+ G + +RV + M +V++ +L+ G+ ++ + LD F
Sbjct: 311 ETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNR 370
Query: 259 MQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQ---------------IVKSGKKAD 303
M+ +EG+ + + ++ + + E + + +++ KA+
Sbjct: 371 ME-EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAE 429
Query: 304 RP-------------------LLNALMDMYAKCGSIGYCKKVFDGMESK----DLTSWNT 340
P + N + ++ K G + ME K ++ +N
Sbjct: 430 SPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNN 489
Query: 341 MLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYG 400
M+ + ++ A +F EM+ + P+ T+ L+ G + N M
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASN 549
Query: 401 VQPSLEHYACLVDILGRSGKLDEALTVARNMPMKLSGSIWGSLLNSCRLDGNVSLAET-- 458
+ + Y +++ L + G+ +A + +N+ + S+ + NS +DG V + +T
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSI-IDGFVKVGDTDS 608
Query: 459 AAERLFEIEPN 469
A E E+ N
Sbjct: 609 AVETYREMSEN 619
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 134/340 (39%), Gaps = 48/340 (14%)
Query: 138 MAIGYSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRD 197
+ I + S + VY++M+ R ++P F F+V + A G R + +
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 198 EEADQVVNNALLRFYVECGCSGDV------------------------------------ 221
+ V N L+ Y + G +G +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 222 --LRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFRAMQLKEGMGFSWITLTTV 275
++VF+ M + NV+S+N+LI G GK+ E + + R + G+ + IT +
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI-SMRDKMVSAGVQPNLITYNAL 372
Query: 276 LPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGYCKKVFDGMESK-- 333
+ + L ++ G + G + N L+D Y K G I + + ME +
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 334 --DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSGCSHSGLTSEGQK 391
D+ ++N ++AG NG IE A LFD++ + PD +TF L+ G G + +
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAM 491
Query: 392 FFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM 431
M G++P Y ++ + G L A + M
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/406 (18%), Positives = 163/406 (40%), Gaps = 85/406 (20%)
Query: 33 LNPTLKSLCKSGKLEEALRLIE-------SPNPTPYQDEDISQLLHLCISRKSLEHGQKL 85
N + +LCK+GK+ +A ++E SPN Y
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT---------------------- 263
Query: 86 HQHLLHSKGRVIENPTLKSKLITLYSVCGRLDEARRVFQDEEED---PPESVWVAMAIGY 142
L+ ++ N G++ +A V ++ E+ P + + + G+
Sbjct: 264 ---LIDGYCKLGGN--------------GKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306
Query: 143 SRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEADQ 202
++ ++ V+++ML + V+P +++ + + G I ++ RD+
Sbjct: 307 WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN------GGKISEAISMRDKMVSA 360
Query: 203 VVNNALLRFYVECGCSGDVLRVFEVMPQRNVVSWNTLIAGFSGQGKVFETLDAFRAMQLK 262
V Q N++++N LI GF + E LD F +++ +
Sbjct: 361 GV-------------------------QPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395
Query: 263 EGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKCGSIGY 322
+ + + + C +L + G + ++ + G D N L+ + G+I
Sbjct: 396 GAVPTTRMYNMLIDAYC-KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454
Query: 323 CKKVFDGMESK---DLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITFVSLLSG 379
KK+FD + SK DL +++ ++ GY G+ KA L EM + ++P +T+ ++ G
Sbjct: 455 AKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Query: 380 -CSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
C L + + ++ ++ ++ Y L+ + GKL++A
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/457 (19%), Positives = 203/457 (44%), Gaps = 36/457 (7%)
Query: 33 LNPTLKSLCKSGKLEEALRLIESPNPTPYQDEDISQLLHLCISRKSLEHGQKLHQHLLHS 92
L+ L C S ++ +A+ L++ Y+ + + +L HG LH +
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPD--------TFTFTTLIHGLFLHNKASEA 207
Query: 93 KGRVIE------NPTLKSKLITLYSVC--GRLDEARRVFQDEEEDPPES---VWVAMAIG 141
V + P L + + +C G +D A + + E+ E+ ++ + G
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 142 YSRNRLSKEALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDEEAD 201
+ + +AL ++ +M + + P F +S + + G + + + +R +
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 202 QVVNNALLRFYVECGCSGDVLRVFEVMPQR----NVVSWNTLIAGFSGQGKVFETLDAFR 257
V +AL+ +V+ G + ++++ M +R ++ ++++LI GF ++ E F
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 258 AMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNALMDMYAKC 317
M K+ + +T +T++ + + G E+ ++ + G + L+ + +
Sbjct: 388 LMISKDCFP-NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 318 GSIGYCKKVFDGMES----KDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNIRPDGITF 373
+ VF M S ++ ++N +L G NG++ KA+ +F+ + RS + PD T+
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 374 VSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEALTVARNM-- 431
++ G +G +G + F + GV P++ Y ++ R G +EA ++ + M
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 432 --PMKLSGSIWGSLLNSCRLDGNVSLAETAAERLFEI 466
P+ SG+ + +L+ + DG+ E +AE + E+
Sbjct: 567 DGPLPNSGT-YNTLIRARLRDGD---REASAELIKEM 599
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 127/298 (42%), Gaps = 22/298 (7%)
Query: 144 RNRLSK-----EALLVYRDMLARSVEPGNFAFSVALKACTDVGDSRVGRAIHAQLAKRDE 198
RNRLS +A+ ++ DM+ P F+ L A + + ++ Q+
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 199 EADQVVNNALLRFYVECGCSGDVL--------RVFEVMPQRNVVSWNTLIAGFSGQGKVF 250
D + ++ C C L ++ ++ + ++V+ ++L+ G+ ++
Sbjct: 115 SHDLYTYS----IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 251 ETLDAFRAMQLKEGMGFSWITLTTVLPICAQLTALHSGKEIHGQIVKSGKKADRPLLNAL 310
+ + A ++ G T TT++ + Q+V+ G + D +
Sbjct: 171 DAV-ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 311 MDMYAKCGSI----GYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIRSNI 366
++ K G I KK+ G D+ +NT++ G ++ A++LF EM I
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 367 RPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDEA 424
RPD T+ SL+S + G S+ + + M + + P++ ++ L+D + GKL EA
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 304 RPLLNALMDMYAKCGSIGYCKKVFDGMESKDLTSWNTMLAGYSINGQIEKAIDLFDEMIR 363
R L+ + + AK +GY D+ + +++L GY + +I A+ L D+M+
Sbjct: 131 RSQLSLALAVLAKMMKLGY---------EPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 364 SNIRPDGITFVSLLSGCSHSGLTSEGQKFFNLMQDYGVQPSLEHYACLVDILGRSGKLDE 423
+PD TF +L+ G SE + M G QP L Y +V+ L + G +D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 424 ALTVARNM 431
AL++ + M
Sbjct: 242 ALSLLKKM 249