Miyakogusa Predicted Gene

Lj5g3v2029590.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2029590.2 Non Chatacterized Hit- tr|I1L3G1|I1L3G1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,56.84,3e-17,coiled-coil,NULL,CUFF.56453.2
         (250 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G51840.1 | Symbols:  | unknown protein; Has 30201 Blast hits ...   286   7e-78

>AT5G51840.1 | Symbols:  | unknown protein; Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr5:21072143-21074131 FORWARD LENGTH=245
          Length = 245

 Score =  286 bits (733), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 154/252 (61%), Positives = 190/252 (75%), Gaps = 10/252 (3%)

Query: 1   MASNPSLLPEIGPDGLAREASVISYTEKIIQEEQLQLRKYIEENYSKIRDVERELANLTL 60
           MAS+P L  EIG DGLAREA VI+YTEKII+EEQ+QLRKYIEENY+KIRDVERE  NL++
Sbjct: 2   MASDPKLKAEIGADGLAREAPVIAYTEKIIEEEQVQLRKYIEENYTKIRDVEREFGNLSM 61

Query: 61  EMKLTAGPKKAALEHLRKKIEVSTEKIRLAKLNEEQARKAWESAAKVVKDEEAVKQKLCE 120
           E+KLTAGPKKAA+EHLRKKIEVSTE+I  AKL EE+ARKA+E+A+KVVKDEEA KQ LCE
Sbjct: 62  ELKLTAGPKKAAMEHLRKKIEVSTERIHAAKLKEEEARKAFEAASKVVKDEEATKQSLCE 121

Query: 121 DLSNLVQESSTSQFSRLEELKRRLEAMNPSRASTNISQDGRSGSPAQDSTTGDGSSVPKA 180
           DL++LVQ+SS +Q++RLEELKRRLEA+NP+R+ST+I Q      P   S   D +    A
Sbjct: 122 DLNSLVQQSSNTQYARLEELKRRLEALNPNRSSTSIQQ---VQEPETKSVV-DSAPAANA 177

Query: 181 RESSGGSAETVPNQSNDQ-KVAATDRPSEG-GDGRSKKKVNFQSKGKGIGAVPKGRASTG 238
            ++  G  E   N  N++       RP+   G+ ++KKK   Q +G+GIG + KGR   G
Sbjct: 178 NQTHPGKPEN--NHGNEEGGKEHGQRPATAEGESKAKKKPQNQGRGRGIGIMNKGRG--G 233

Query: 239 WTGAGFDVDGRT 250
           WTGAGFDVDGR 
Sbjct: 234 WTGAGFDVDGRN 245