Miyakogusa Predicted Gene

Lj5g3v2027220.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2027220.2 tr|I4IVE4|I4IVE4_MICAE Dihydrodipicolinate
reductase OS=Microcystis aeruginosa PCC 9701 GN=dapB
PE=3,43.26,3e-19,no description,NAD(P)-binding domain; NAD(P)-binding
Rossmann-fold domains,NULL; DapB_N,Dihydrodipic,CUFF.56444.2
         (172 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G52100.1 | Symbols: crr1 | Dihydrodipicolinate reductase, bac...   219   8e-58

>AT5G52100.1 | Symbols: crr1 | Dihydrodipicolinate reductase,
           bacterial/plant | chr5:21170203-21172107 FORWARD
           LENGTH=298
          Length = 298

 Score =  219 bits (558), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 116/177 (65%), Positives = 139/177 (78%), Gaps = 13/177 (7%)

Query: 1   MSALSCQFHSINYLNSQNVKSRGKHFISCSA-QPMQSNIKVVINGAAKEIGRAAVEAVTK 59
           M+A++C F  +    S+++K     F SCSA QP Q+NIKV+INGAAKEIGRAAV AVTK
Sbjct: 1   MAAVNCHFFQL----SRHLKPSRPSF-SCSASQPSQNNIKVIINGAAKEIGRAAVVAVTK 55

Query: 60  ARGMEVAGAVDTYHVGEDIGKVCGMEEPLEIPILNDLIMVLGSISQSKETTVVVDFTDPS 119
           ARGME+AGAVD + VGEDIG +C MEEPLEIP+++DL MVLGSISQ KE  VV+DFTDPS
Sbjct: 56  ARGMELAGAVDNHFVGEDIGLLCDMEEPLEIPVVSDLTMVLGSISQGKEVGVVIDFTDPS 115

Query: 120 SVYDNVKQATAFGMKSVVYVPRIKLDTVAALSAFCEKAS-------TVSTGVCWLHQ 169
           +VY+NVKQATAFGMKSVVYVPRIK +TV+ALSA C+KA+       T+S G   L Q
Sbjct: 116 TVYENVKQATAFGMKSVVYVPRIKPETVSALSALCDKATMGCLVAPTLSIGSILLQQ 172