Miyakogusa Predicted Gene

Lj5g3v2013910.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2013910.1 CUFF.56390.1
         (1098 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G25540.1 | Symbols: MSH3, ATMSH3 | homolog of DNA mismatch re...  1233   0.0  
AT4G02070.2 | Symbols: MSH6 | MUTS homolog 6 | chr4:906079-91293...   285   1e-76
AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MUTS homolog 6 | c...   285   1e-76
AT3G18524.1 | Symbols: MSH2, ATMSH2 | MUTS homolog 2 | chr3:6368...   195   2e-49
AT3G24495.1 | Symbols: MSH7, MSH6-2, ATMSH7 | MUTS homolog 7 | c...   155   2e-37
AT4G17380.1 | Symbols: MSH4, ATMSH4 | MUTS-like protein 4 | chr4...   152   1e-36
AT3G20475.1 | Symbols: ATMSH5, MSH5 | MUTS-homologue 5 | chr3:71...   143   5e-34
AT5G54090.1 | Symbols:  | DNA mismatch repair protein MutS, type...    92   2e-18
AT3G24320.1 | Symbols: MSH1, CHM1, ATMSH1, CHM | MUTL protein ho...    88   3e-17
AT1G65070.2 | Symbols:  | DNA mismatch repair protein MutS, type...    77   5e-14
AT1G65070.1 | Symbols:  | DNA mismatch repair protein MutS, type...    77   6e-14

>AT4G25540.1 | Symbols: MSH3, ATMSH3 | homolog of DNA mismatch repair
            protein MSH3 | chr4:13042700-13048115 REVERSE LENGTH=1081
          Length = 1081

 Score = 1233 bits (3189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/1100 (59%), Positives = 786/1100 (71%), Gaps = 43/1100 (3%)

Query: 1    MGKQKQQVISRFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXISATVTFSPAKRRLTSQX 60
            MGKQKQQ ISRFFA                            ISATV+FSP+KR+L S  
Sbjct: 1    MGKQKQQTISRFFAPKPKSPTHEPNPVAESSTPPPK------ISATVSFSPSKRKLLSDH 54

Query: 61   XXXXXXXXXXXXXXXXHN-HSPSLHQRFLQKLLEPSSHPSTSDPQPHSSFKSVKYTPLEQ 119
                            +    P+LHQRFLQ+ LEPS  P    P+  SS    KYTPLEQ
Sbjct: 55   LAAASPKKPKLSPHTQNPVPDPNLHQRFLQRFLEPS--PEEYVPETSSS---RKYTPLEQ 109

Query: 120  QVVELKAKHPDVLLMVEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASIPTFRLNVHV 179
            QVVELK+K+PDV+LMVEVGY+YRFFGEDAE AARVLGIYAHMDHNF+TAS+PTFRLN HV
Sbjct: 110  QVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVPTFRLNFHV 169

Query: 180  RRLVSAGYKVGVVKQTETAAIKAHGLNKSGPFCRGLSALYTKATLEAAKDLGGDEEGCGA 239
            RRLV+AGYK+GVVKQTETAAIK+HG N++GPF RGLSALYTKATLEAA+D+ G   G   
Sbjct: 170  RRLVNAGYKIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDISGGCGGEEG 229

Query: 240  V---SNYLLCVVEKSILGERSNCGVEGGFDVRVGIVAVEISTGDVVYGEFNDNFMRSELE 296
                SN+L+CVV++ +  E   CG+E  FDVRVG+V VEISTG+VVY EFNDNFMRS LE
Sbjct: 230  FGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYEEFNDNFMRSGLE 289

Query: 297  AVLVSLSPAELLLGDPLSRQTEKLLLDFAGPASNVRVERASRDCFTGGGALAEVLTLYEN 356
            AV++SLSPAELLLG PLS+QTEK L+  AGP SNVRVERAS DCF+ G A+ EV++L E 
Sbjct: 290  AVILSLSPAELLLGQPLSQQTEKFLVAHAGPTSNVRVERASLDCFSNGNAVDEVISLCEK 349

Query: 357  MCVDSPSHSMQSN-DLNEQSNQQLVVKEVMNMPDLAVQALALTAHHLKGFSFERILCSGA 415
            +   +     +   +  E+    L V  +MNMP L VQALALT  HLK F FERIL  GA
Sbjct: 350  ISAGNLEDDKEMKLEAAEKGMSCLTVHTIMNMPHLTVQALALTFCHLKQFGFERILYQGA 409

Query: 416  SLRPFVTKTEMILSANALQQLEVLQNKIDGSESGSLLQIMNHTLTIFGSRLLRHWVSHPL 475
            S R   + TEM LSAN LQQLEV++N  DGSESGSL   MNHTLT++GSRLLRHWV+HPL
Sbjct: 410  SFRSLSSNTEMTLSANTLQQLEVVKNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPL 469

Query: 476  CDQTLISARLDAVCEIAESMGSFKGKKLG--CFEEEPDVSIVQPELAYVLSLVLTALSRA 533
            CD+ LISARLDAV EI+  MGS    +L     EE  + +IV PE   VLS VLTA+SR+
Sbjct: 470  CDRNLISARLDAVSEISACMGSHSSSQLSSELVEEGSERAIVSPEFYLVLSSVLTAMSRS 529

Query: 534  PDIQRGITRIFHCTATPSEFIAVVQAILSAGKRLQQLKIGEEDNNK------LCSHLLKK 587
             DIQRGITRIFH TA  +EFIAV++AIL AGK++Q+L I ++   +      + S LL+K
Sbjct: 530  SDIQRGITRIFHRTAKATEFIAVMEAILLAGKQIQRLGIKQDSEMRSMQSATVRSTLLRK 589

Query: 588  LILTASSASVIGNAAKLLSSLDKDSADQGDIPNLIIASEGRFPEVIRARKDFQMAVEQLD 647
            LI   SS  V+ NA KLLS+L+K++A +GD+ +++I S  +FPE+  AR+   +  E+LD
Sbjct: 590  LISVISSPVVVDNAGKLLSALNKEAAVRGDLLDILITSSDQFPELAEARQAVLVIREKLD 649

Query: 648  SLISLYRKRLGIRNLEFLSVSGATHLIELSTDVRVPSNWVKVNSTKKTIRYHPPEVVTAL 707
            S I+ +RK+L IRNLEFL VSG THLIEL  D +VP NWVKVNSTKKTIRYHPPE+V  L
Sbjct: 650  SSIASFRKKLAIRNLEFLQVSGITHLIELPVDSKVPMNWVKVNSTKKTIRYHPPEIVAGL 709

Query: 708  DGLSLAKEELTIACRAAWDSFLRDFSKHYAEFXXXXXXXXXXDCLHSLAILSRNKSYARP 767
            D L+LA E L I  RA+WDSFL+ FS++Y +F          DCLHSL+ LSRNK+Y RP
Sbjct: 710  DELALATEHLAIVNRASWDSFLKSFSRYYTDFKAAVQALAALDCLHSLSTLSRNKNYVRP 769

Query: 768  VFVDDYEPVQIQICSGRHPVLETTLQDNFVPNDTNMHADREYCQIVTGPNMGGKSCYVRQ 827
             FVDD EPV+I I SGRHPVLET LQDNFVPNDT +HA+ EYCQI+TGPNMGGKSCY+RQ
Sbjct: 770  EFVDDCEPVEINIQSGRHPVLETILQDNFVPNDTILHAEGEYCQIITGPNMGGKSCYIRQ 829

Query: 828  VALIAVMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILHSCTE 887
            VALI++MAQVGSFVPAS AKLHVLDG++TRMGASDSIQ GRSTFLEELSE SHI+ +C+ 
Sbjct: 830  VALISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSS 889

Query: 888  RSLVIIDELGRGTSTHDGMAIAYATLHYLLKQKKSMALFVTHYPKIASLVAEFPGSVAAY 947
            RSLVI+DELGRGTSTHDG+AIAYATL +LL +K+ + LFVTHYP+IA +   FPGSV  Y
Sbjct: 890  RSLVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTY 949

Query: 948  HVSHLTSHDNASKNSNLDREDITYLYKLVPGVSERSFGFKVAQLAQLPPLCISRAIAMAF 1007
            HVS+LT   +     + D +D+TYLYKLV G+  RSFGFKVAQLAQ+PP CI RAI+MA 
Sbjct: 950  HVSYLTLQKD---KGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAA 1006

Query: 1008 KLEALVNSRVHSRSRKELLLDAPMIDQEQESRELMVQPNDCALQDFGRAYKEFSSNLKSA 1067
            KLEA V +R      +   +  P   +E    E  +            A  +  ++LK A
Sbjct: 1007 KLEAEVRAR-----ERNTRMGEPEGHEEPRGAEESIS-----------ALGDLFADLKFA 1050

Query: 1068 ILDDDLAKSFQLLENARSIA 1087
            + ++D  K+F+ L++A  IA
Sbjct: 1051 LSEEDPWKAFEFLKHAWKIA 1070


>AT4G02070.2 | Symbols: MSH6 | MUTS homolog 6 | chr4:906079-912930
            FORWARD LENGTH=1321
          Length = 1321

 Score =  285 bits (730), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 287/972 (29%), Positives = 452/972 (46%), Gaps = 108/972 (11%)

Query: 113  KYTPLEQQVVELKAKHPDVLLMVEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASIPT 172
            K T  ++Q  E KAKH D ++  ++G  Y  F  DA   A+ L I  +M         P 
Sbjct: 375  KLTGGQRQWWEFKAKHMDKVVFFKMGKFYELFEMDAHVGAKELDI-QYMKGEQPHCGFPE 433

Query: 173  FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGLNKSGP----FCRGLSALYTKATLEAAK 228
               +V++ +LV  GY+V VV+QTET         ++G       R + A+ TK TL   +
Sbjct: 434  KNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREVCAVVTKGTLTDGE 493

Query: 229  DLGGDEEGCGAVSNYLLCVVEKSILGER-SNCGVEGGFDVRVGIVAVEISTGDVVYGEFN 287
             L  + +     ++YL+ + E    GE  +N   E  F    G+  V+++T  ++ G+F 
Sbjct: 494  MLLTNPD-----ASYLMALTEG---GESLTNPTAEHNF----GVCLVDVATQKIILGQFK 541

Query: 288  DNFMRSELEAVLVSLSPAELLL-GDPLSRQTEKLLL-DFAGPASNVRVERASRDCFTGGG 345
            D+   S L  +L  + P E++     LS  TE+ ++     P  N  V  +  + +    
Sbjct: 542  DDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQTRNPLVNNLVPLS--EFWDSEK 599

Query: 346  ALAEVLTLYENM-CVDSPSHSMQSNDLNEQSNQQLVVKEVMNMPD----LAVQALALTAH 400
             + EV  +Y+ + C  S ++S +   L + S+    +   +   D    LA+ AL    +
Sbjct: 600  TIYEVGIIYKRINCQPSSAYSSEGKILGDGSSFLPKMLSELATEDKNGSLALSALGGAIY 659

Query: 401  HLKGFSFERILCSGASLR--PFVT------KTEMILSANALQQLEVLQNKIDGSESGSLL 452
            +L+    +  L   A     P+        K  M+L A AL+ LE+ +N  +G  SG+L 
Sbjct: 660  YLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENSRNGGYSGTLY 719

Query: 453  QIMNHTLTIFGSRLLRHWVSHPLCDQTLISARLDAVCEIAESMGSFKGKKLGCFEEEPDV 512
              +N  +T  G RLL+ W++ PL +  LI  R DAV                        
Sbjct: 720  AQLNQCITASGKRLLKTWLARPLYNTELIKERQDAV------------------------ 755

Query: 513  SIVQPE-LAYVLSLVLTALSRAPDIQRGITRIFHCT-ATPSEFIAVVQAILSAGKRLQQL 570
            +I++ E L Y L     +LSR PD++R I R+F    A+      VV    +A K++Q+ 
Sbjct: 756  AILRGENLPYSLEF-RKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEF 814

Query: 571  KI---GEEDNNKLCSHL-----------LKKLILTASSASVIGNAAKLLSSLDKDSADQG 616
                 G E   + CS L           L  L+    S   I ++ K      KD+ D  
Sbjct: 815  ISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYF----KDAFDWV 870

Query: 617  DIPN--LIIASEGRFPEVIRARKDFQMAVEQLDSLISLYRKRLGIRNLEFLSVSGATHLI 674
            +  N   +I  EG   E   A K  +     L   +   RK LG  ++ +++V    +L+
Sbjct: 871  EAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLL 930

Query: 675  EL--STDVRVPSNWVKVNSTKKTIRYHPPEVVTALDGLSLAKEELTIACRAAWDSFLRDF 732
            E+  S    VP ++   +S K   RY  P +   L  LS AK E   A ++     +  F
Sbjct: 931  EVPESLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRF 990

Query: 733  SKHYAEFXXXXXXXXXXDCLHSLAILSRNKSY----ARPVF---VDDYEPVQIQICSGRH 785
             +H  ++          D L SLA  S   SY     RPV      D  P  +      H
Sbjct: 991  CEHQEKWRQLVSATAELDVLISLAFAS--DSYEGVRCRPVISGSTSDGVP-HLSATGLGH 1047

Query: 786  PVL--ETTLQDNFVPNDTNMH-ADREYCQIVTGPNMGGKSCYVRQVALIAVMAQVGSFVP 842
            PVL  ++  + +FVPN+  +  A++    ++TGPNMGGKS  +RQV L  ++AQ+G+ VP
Sbjct: 1048 PVLRGDSLGRGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVP 1107

Query: 843  ASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILHSCTERSLVIIDELGRGTST 902
            A + ++  +D I  RMGA D I  G+STFL ELSET+ +L S T  SLV++DELGRGT+T
Sbjct: 1108 AETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNSLVVLDELGRGTAT 1167

Query: 903  HDGMAIAYATLHYLLKQKKSMALFVTHYPKIASLVAEFPGSVAAYHVSHLTSHDNASKNS 962
             DG AIA + L + +++ +    F THY +++      P  V+  H++            
Sbjct: 1168 SDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQTNP-KVSLCHMACQIGEGIGGV-- 1224

Query: 963  NLDREDITYLYKLVPGVSERSFGFKVAQLAQLPPLCISRAIAMAFKLEALVNSRVHSRSR 1022
                E++T+LY+L PG   +S+G  VA+LA LP   + RA+  + + EAL   + H ++ 
Sbjct: 1225 ----EEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFEALYG-KNHRKTD 1279

Query: 1023 KELLLDAPMIDQ 1034
             +L   A MI Q
Sbjct: 1280 HKL---AAMIKQ 1288


>AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MUTS homolog 6 |
            chr4:906079-912930 FORWARD LENGTH=1324
          Length = 1324

 Score =  285 bits (729), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 287/972 (29%), Positives = 452/972 (46%), Gaps = 108/972 (11%)

Query: 113  KYTPLEQQVVELKAKHPDVLLMVEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASIPT 172
            K T  ++Q  E KAKH D ++  ++G  Y  F  DA   A+ L I  +M         P 
Sbjct: 378  KLTGGQRQWWEFKAKHMDKVVFFKMGKFYELFEMDAHVGAKELDI-QYMKGEQPHCGFPE 436

Query: 173  FRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGLNKSGP----FCRGLSALYTKATLEAAK 228
               +V++ +LV  GY+V VV+QTET         ++G       R + A+ TK TL   +
Sbjct: 437  KNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETGSKDKVVKREVCAVVTKGTLTDGE 496

Query: 229  DLGGDEEGCGAVSNYLLCVVEKSILGER-SNCGVEGGFDVRVGIVAVEISTGDVVYGEFN 287
             L  + +     ++YL+ + E    GE  +N   E  F    G+  V+++T  ++ G+F 
Sbjct: 497  MLLTNPD-----ASYLMALTEG---GESLTNPTAEHNF----GVCLVDVATQKIILGQFK 544

Query: 288  DNFMRSELEAVLVSLSPAELLL-GDPLSRQTEKLLL-DFAGPASNVRVERASRDCFTGGG 345
            D+   S L  +L  + P E++     LS  TE+ ++     P  N  V  +  + +    
Sbjct: 545  DDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQTRNPLVNNLVPLS--EFWDSEK 602

Query: 346  ALAEVLTLYENM-CVDSPSHSMQSNDLNEQSNQQLVVKEVMNMPD----LAVQALALTAH 400
             + EV  +Y+ + C  S ++S +   L + S+    +   +   D    LA+ AL    +
Sbjct: 603  TIYEVGIIYKRINCQPSSAYSSEGKILGDGSSFLPKMLSELATEDKNGSLALSALGGAIY 662

Query: 401  HLKGFSFERILCSGASLR--PFVT------KTEMILSANALQQLEVLQNKIDGSESGSLL 452
            +L+    +  L   A     P+        K  M+L A AL+ LE+ +N  +G  SG+L 
Sbjct: 663  YLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENSRNGGYSGTLY 722

Query: 453  QIMNHTLTIFGSRLLRHWVSHPLCDQTLISARLDAVCEIAESMGSFKGKKLGCFEEEPDV 512
              +N  +T  G RLL+ W++ PL +  LI  R DAV                        
Sbjct: 723  AQLNQCITASGKRLLKTWLARPLYNTELIKERQDAV------------------------ 758

Query: 513  SIVQPE-LAYVLSLVLTALSRAPDIQRGITRIFHCT-ATPSEFIAVVQAILSAGKRLQQL 570
            +I++ E L Y L     +LSR PD++R I R+F    A+      VV    +A K++Q+ 
Sbjct: 759  AILRGENLPYSLEF-RKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEF 817

Query: 571  KI---GEEDNNKLCSHL-----------LKKLILTASSASVIGNAAKLLSSLDKDSADQG 616
                 G E   + CS L           L  L+    S   I ++ K      KD+ D  
Sbjct: 818  ISTLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYF----KDAFDWV 873

Query: 617  DIPN--LIIASEGRFPEVIRARKDFQMAVEQLDSLISLYRKRLGIRNLEFLSVSGATHLI 674
            +  N   +I  EG   E   A K  +     L   +   RK LG  ++ +++V    +L+
Sbjct: 874  EAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLL 933

Query: 675  EL--STDVRVPSNWVKVNSTKKTIRYHPPEVVTALDGLSLAKEELTIACRAAWDSFLRDF 732
            E+  S    VP ++   +S K   RY  P +   L  LS AK E   A ++     +  F
Sbjct: 934  EVPESLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRF 993

Query: 733  SKHYAEFXXXXXXXXXXDCLHSLAILSRNKSY----ARPVF---VDDYEPVQIQICSGRH 785
             +H  ++          D L SLA  S   SY     RPV      D  P  +      H
Sbjct: 994  CEHQEKWRQLVSATAELDVLISLAFAS--DSYEGVRCRPVISGSTSDGVP-HLSATGLGH 1050

Query: 786  PVL--ETTLQDNFVPNDTNMH-ADREYCQIVTGPNMGGKSCYVRQVALIAVMAQVGSFVP 842
            PVL  ++  + +FVPN+  +  A++    ++TGPNMGGKS  +RQV L  ++AQ+G+ VP
Sbjct: 1051 PVLRGDSLGRGSFVPNNVKIGGAEKASFILLTGPNMGGKSTLLRQVCLAVILAQIGADVP 1110

Query: 843  ASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILHSCTERSLVIIDELGRGTST 902
            A + ++  +D I  RMGA D I  G+STFL ELSET+ +L S T  SLV++DELGRGT+T
Sbjct: 1111 AETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNSLVVLDELGRGTAT 1170

Query: 903  HDGMAIAYATLHYLLKQKKSMALFVTHYPKIASLVAEFPGSVAAYHVSHLTSHDNASKNS 962
             DG AIA + L + +++ +    F THY +++      P  V+  H++            
Sbjct: 1171 SDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQTNP-KVSLCHMACQIGEGIGGV-- 1227

Query: 963  NLDREDITYLYKLVPGVSERSFGFKVAQLAQLPPLCISRAIAMAFKLEALVNSRVHSRSR 1022
                E++T+LY+L PG   +S+G  VA+LA LP   + RA+  + + EAL   + H ++ 
Sbjct: 1228 ----EEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFEALYG-KNHRKTD 1282

Query: 1023 KELLLDAPMIDQ 1034
             +L   A MI Q
Sbjct: 1283 HKL---AAMIKQ 1291


>AT3G18524.1 | Symbols: MSH2, ATMSH2 | MUTS homolog 2 |
            chr3:6368151-6372409 REVERSE LENGTH=937
          Length = 937

 Score =  195 bits (495), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/267 (39%), Positives = 159/267 (59%), Gaps = 14/267 (5%)

Query: 750  DCLHSLAILSRN--KSYARPVFVDDYEPVQIQICSGRHPVLETTLQDNFVPNDTNMHADR 807
            D L S A L+ +    Y RP  +   +   I +   RHP +E     NF+PND  +   +
Sbjct: 600  DVLLSFADLAASCPTPYCRPE-ITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGK 658

Query: 808  EYCQIVTGPNMGGKSCYVRQVALIAVMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQG 867
             + QIVTGPNMGGKS ++RQV +I +MAQVGSFVP   A + + D I+ R+GA D   +G
Sbjct: 659  SWFQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRG 718

Query: 868  RSTFLEELSETSHILHSCTERSLVIIDELGRGTSTHDGMAIAYATLHYLLKQKKSMALFV 927
             STF++E+ ET+ IL   +++SL+IIDELGRGTST+DG  +A+A   +L++ K++  LF 
Sbjct: 719  VSTFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFA 778

Query: 928  THYPKIASLV---AEFPGSVAAYHVSHLTSH-DNASKNSNLDREDITYLYKLVPGVSERS 983
            TH+ ++ +L    +E  G+       H+++H D  S+        +T LYK+ PG  ++S
Sbjct: 779  THFHELTALAQANSEVSGNTVGVANFHVSAHIDTESRK-------LTMLYKVEPGACDQS 831

Query: 984  FGFKVAQLAQLPPLCISRAIAMAFKLE 1010
            FG  VA+ A  P   ++ A   A +LE
Sbjct: 832  FGIHVAEFANFPESVVALAREKAAELE 858



 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 44/240 (18%)

Query: 269 VGIVAVEISTGDVVYGEFNDNFMRSELEAVLVSLSPAELLLGDPLSRQTEKLLLDFAGPA 328
           +G+  V+++   +   EF D+   + LE+ L++L   E +                  PA
Sbjct: 158 IGMAYVDLTRRVLGLAEFLDDSRFTNLESSLIALGAKECIF-----------------PA 200

Query: 329 SNVRVERASRDCFTGGGALAEVLTLYENMCVDSPSHSMQSNDLNEQSNQQLV------VK 382
            + +    S +C     +L + L     M  +   H  +  DL+    ++LV      V+
Sbjct: 201 ESGK----SNEC----KSLYDSLERCAVMITERKKHEFKGRDLDSDL-KRLVKGNIEPVR 251

Query: 383 EVMNMPDLAVQALALTAHHLKGFSFERILCS-----GASLRPFVTKTEMILSANALQQLE 437
           ++++  DLA  AL          SF  +L +       ++R +     M L + A++ L 
Sbjct: 252 DLVSGFDLATPALGAL------LSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAAMRALN 305

Query: 438 VLQNKIDGSESGSLLQIMNHTLTI-FGSRLLRHWVSHPLCDQTLISARLDAVCEIAESMG 496
           V+++K D +++ SL  +MN T T   G RLL  W+  PL D   I  RLD V    E  G
Sbjct: 306 VMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCFVEEAG 365


>AT3G24495.1 | Symbols: MSH7, MSH6-2, ATMSH7 | MUTS homolog 7 |
            chr3:8912418-8918086 REVERSE LENGTH=1109
          Length = 1109

 Score =  155 bits (392), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 142/275 (51%), Gaps = 20/275 (7%)

Query: 750  DCLHSLAILSR--NKSYARPVFVDDYEPVQ---------IQICSGRHPVLETTLQDNFVP 798
            D L S AI +     S ARPV   + E            ++I    HP          VP
Sbjct: 770  DVLRSFAIAASLSAGSMARPVIFPESEATDQNQKTKGPILKIQGLWHPFAVAADGQLPVP 829

Query: 799  NDTNMHADREYCQ-------IVTGPNMGGKSCYVRQVALIAVMAQVGSFVPASSAKLHVL 851
            ND  +   R           ++TGPNMGGKS  +R   L  + AQ+G +VP  S ++ ++
Sbjct: 830  NDILLGEARRSSGSIHPRSLLLTGPNMGGKSTLLRATCLAVIFAQLGCYVPCESCEISLV 889

Query: 852  DGIYTRMGASDSIQQGRSTFLEELSETSHILHSCTERSLVIIDELGRGTSTHDGMAIAYA 911
            D I+TR+GASD I  G STFL E +ET+ +L + T+ SLVI+DELGRGTST DG AIAY+
Sbjct: 890  DTIFTRLGASDRIMTGESTFLVECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYS 949

Query: 912  TLHYLLKQKKSMALFVTHYPKIASLVAEFPGSVAAYHVSHLTSHDNASKNSNLDREDITY 971
               +L+++ +   LF THY  +    A  P  V + H++      +  +    D +D+ +
Sbjct: 950  VFRHLVEKVQCRMLFATHYHPLTKEFASHP-RVTSKHMACAFKSRSDYQPRGCD-QDLVF 1007

Query: 972  LYKLVPGVSERSFGFKVAQLAQLPPLCISRAIAMA 1006
            LY+L  G    S+G +VA +A +P   +  A   A
Sbjct: 1008 LYRLTEGACPESYGLQVALMAGIPNQVVETASGAA 1042



 Score = 99.4 bits (246), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 180/407 (44%), Gaps = 57/407 (14%)

Query: 105 PHSSFKSVKYTPLEQQVVELKAKHPDVLLMVEVGYKYRFFGEDAENAARVLGIYAHMDHN 164
           P   FK  K +  ++Q   +K+++ D++L  +VG  Y  +  DAE     LG +  +D  
Sbjct: 260 PPDVFK--KMSASQKQYWSVKSEYMDIVLFFKVGKFYELYELDAE-----LG-HKELDWK 311

Query: 165 FLTASIPTFR--------LNVHVRRLVSAGYKVGVVKQTETA-AIKAHGLNKSGPFCRGL 215
              + +   R        ++  V++L++ GYKVG ++Q ET+   KA G N   P  R L
Sbjct: 312 MTMSGVGKCRQVGISESGIDEAVQKLLARGYKVGRIEQLETSDQAKARGANTIIP--RKL 369

Query: 216 SALYTKATLEAAKDLGGDEEGCGAVSNYLLCVVEKSILGERSNCGVEGGFDVRVGIVAVE 275
             + T +T          E   G  + +LL +  K I  E   C    GF        V+
Sbjct: 370 VQVLTPST--------ASEGNIGPDAVHLLAI--KEIKMELQKCSTVYGF------AFVD 413

Query: 276 ISTGDVVYGEFNDNFMRSELEAVLVSLSPAELLLGDP-LSRQTEKLLLDFAGPASNVRVE 334
            +      G  +D+   + L A+L+ +SP E+L     LSR+ +K L  +          
Sbjct: 414 CAALRFWVGSISDDASCAALGALLMQVSPKEVLYDSKGLSREAQKALRKYT--------- 464

Query: 335 RASRDCFTGGGA--LAEVLTLYENMCVDSPSHSMQSNDLNEQSNQQL-VVKEVMNMPDLA 391
                  TG  A  LA V  +  +       + ++SN   + S++      + +N  D+A
Sbjct: 465 ------LTGSTAVQLAPVPQVMGDTDAAGVRNIIESNGYFKGSSESWNCAVDGLNECDVA 518

Query: 392 VQALALTAHHLKGFSFERILCSGASLRPFVTKTEMILSANALQQLEVLQNKIDGSESGSL 451
           + AL    +HL     E +L  G      V +  + +    +  LE+  N  DG  SG+L
Sbjct: 519 LSALGELINHLSRLKLEDVLKHGDIFPYQVYRGCLRIDGQTMVNLEIFNNSCDGGPSGTL 578

Query: 452 LQIMNHTLTIFGSRLLRHWVSHPLCDQTLISARLDAVCEI---AESM 495
            + +++ ++  G RLLR+W+ HPL D   I+ RLD V E    +ESM
Sbjct: 579 YKYLDNCVSPTGKRLLRNWICHPLKDVESINKRLDVVEEFTANSESM 625


>AT4G17380.1 | Symbols: MSH4, ATMSH4 | MUTS-like protein 4 |
            chr4:9708742-9714068 FORWARD LENGTH=792
          Length = 792

 Score =  152 bits (385), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/255 (35%), Positives = 147/255 (57%), Gaps = 19/255 (7%)

Query: 764  YARPVFVDDYEPVQIQICSGRHPVLETTLQDNFVPNDTNMHADREYCQIVTGPNMGGKSC 823
            Y+RP   D   P+ I   +GRHP+LE+ + ++FV N   M ++     +V GPNM GKS 
Sbjct: 507  YSRPELTDS-GPLAID--AGRHPILES-IHNDFVSNSIFM-SEATNMLVVMGPNMSGKST 561

Query: 824  YVRQVALIAVMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILH 883
            Y++QV L+ ++AQ+G +VPA  A + V+D I+TRMG  D+++   STF+ E+ ET+ I+ 
Sbjct: 562  YLQQVCLVVILAQIGCYVPARFATIRVVDRIFTRMGTMDNLESNSSTFMTEMRETAFIMQ 621

Query: 884  SCTERSLVIIDELGRGTSTHDGMAIAYATLHYLLKQKKSMALFVTHYPKIASLVAEFPGS 943
            + T RSL+++DELGR TS+ DG+A+A++   YLL   K+  +F TH   +A L   +P +
Sbjct: 622  NVTNRSLIVMDELGRATSSSDGLAMAWSCCEYLLSL-KAYTVFATHMDSLAELATIYP-N 679

Query: 944  VAAYHVSHLTSHDNASKNSNLDREDITYLYKLVPG-VSERSFGFKVAQLAQLPPLCISRA 1002
            V   H  ++   DN           + + ++L  G +    +G  +A++A LP   I  A
Sbjct: 680  VKVLHF-YVDIRDNR----------LDFKFQLRDGTLHVPHYGLLLAEVAGLPSTVIDTA 728

Query: 1003 IAMAFKLEALVNSRV 1017
              +  ++    N R+
Sbjct: 729  RIITKRITDKENKRI 743


>AT3G20475.1 | Symbols: ATMSH5, MSH5 | MUTS-homologue 5 |
            chr3:7143546-7150811 FORWARD LENGTH=807
          Length = 807

 Score =  143 bits (361), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 137/254 (53%), Gaps = 11/254 (4%)

Query: 750  DCLHSLAILSRNKSYARPVFVDDYEPVQIQICSGRHPVLETTLQDNFVPNDTNMHADREY 809
            DC+ SLA ++   +Y RPV   +     + I +GRH VL+    D F+PNDT ++ D   
Sbjct: 509  DCILSLACVAHQNNYVRPVLTVES---LLDIRNGRH-VLQEMAVDTFIPNDTEIN-DNGR 563

Query: 810  CQIVTGPNMGGKSCYVRQVALIAVMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQGRS 869
              I+TGPN  GKS YV+QVALI  ++ +GSFVPA +A + + D I+  MG S  +   +S
Sbjct: 564  IHIITGPNYSGKSIYVKQVALIVFLSHIGSFVPADAATVGLTDRIFCAMG-SKFMTAEQS 622

Query: 870  TFLEELSETSHILHSCTERSLVIIDELGRGTSTHDGMAIAYATL-HYLLKQKKSMALFVT 928
            TF+ +L +   +L   T RSL ++DE G+GT T DG+ +   T+ H+    +    +  T
Sbjct: 623  TFMIDLHQVGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTISHFATCAEPPRVVVCT 682

Query: 929  HYPKIASLVAEFPGSVAAYHVSHLTSHDNASKNSNLDREDITYLYKLVPGVSERSFGFKV 988
            H  ++ +           ++   +   D  S N     E+I +LY+L+PG +  S+G   
Sbjct: 683  HLTELLNESCLPVSEKIKFYTMSVLRPDTESAN----MEEIVFLYRLIPGQTLLSYGLHC 738

Query: 989  AQLAQLPPLCISRA 1002
            A LA +P   + RA
Sbjct: 739  ALLAGVPEEVVKRA 752


>AT5G54090.1 | Symbols:  | DNA mismatch repair protein MutS, type 2 |
            chr5:21948283-21952550 REVERSE LENGTH=796
          Length = 796

 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 812  IVTGPNMGGKSCYVRQVALIAVMAQVGSFVPAS-SAKLHVLDGIYTRMGASDSIQQGRST 870
            ++TGPN GGK+  ++ V L A+MA+ G +V A+ SA++   D IY  +G   S+ Q  ST
Sbjct: 438  VITGPNTGGKTICLKSVGLAAMMAKSGLYVLATESARIPWFDNIYADIGDEQSLLQSLST 497

Query: 871  FLEELSETSHILHSCTERSLVIIDELGRGTSTHDGMAIAYATLHYLLKQKKSMALFVTHY 930
            F   L + S IL   T RSLV++DE+G GT+  +G A+  A L    +    + +  TH+
Sbjct: 498  FSGHLKQISEILSHSTSRSLVLLDEVGAGTNPLEGAALGMAILESFAESGSLLTMATTHH 557

Query: 931  PKIASLVAEFPGSVAAYHVSHLTSHDNASKNSNLDREDITY--LYKLVPGVSERSFGFKV 988
             ++ +                L   ++A +N+ ++ +D+     YK++ GV  RS    +
Sbjct: 558  GELKT----------------LKYSNSAFENACMEFDDLNLKPTYKILWGVPGRSNAINI 601

Query: 989  AQLAQLPPLCISRAIAMAFKLEALVNSRVHSRSRKELLLDAPMIDQE 1035
            A    LP   I  A  +     A +N         E++LD     QE
Sbjct: 602  ADRLGLPCDIIESARELYGSASAEIN---------EVILDMERYKQE 639


>AT3G24320.1 | Symbols: MSH1, CHM1, ATMSH1, CHM | MUTL protein homolog
            1 | chr3:8823229-8829571 REVERSE LENGTH=1118
          Length = 1118

 Score = 88.2 bits (217), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 104/217 (47%), Gaps = 15/217 (6%)

Query: 797  VPNDTNMH--ADREYCQIVTGPNMGGKSCYVRQVALIAVMAQVGSFVPASSAKLHVLDGI 854
            V + T +H   D +   ++TGPN GGKS  +R +   A++   G  VPA SA +   D I
Sbjct: 748  VSSGTAVHNTVDMQSLFLLTGPNGGGKSSLLRSICAAALLGISGLMVPAESACIPHFDSI 807

Query: 855  YTRMGASDSIQQGRSTFLEELSETSHILHSCTERSLVIIDELGRGTSTHDGMAIAYATLH 914
               M + DS   G+S+F  E+SE   I+   T RSLV+IDE+ RGT T  G  IA + + 
Sbjct: 808  MLHMKSYDSPVDGKSSFQVEMSEIRSIVSQATSRSLVLIDEICRGTETAKGTCIAGSVVE 867

Query: 915  YLLKQKKSMALFVTHYPKIASLVAEFPGSVAAYHVSHLTSHDNASKNSNLDREDITYLYK 974
              L     + +  TH   I SL       + A ++++      A    N++ +     +K
Sbjct: 868  S-LDTSGCLGIVSTHLHGIFSL------PLTAKNITY-----KAMGAENVEGQ-TKPTWK 914

Query: 975  LVPGVSERSFGFKVAQLAQLPPLCISRAIAMAFKLEA 1011
            L  GV   S  F+ A+   +P   I RA A+   + A
Sbjct: 915  LTDGVCRESLAFETAKREGVPESVIQRAEALYLSVYA 951


>AT1G65070.2 | Symbols:  | DNA mismatch repair protein MutS, type 2
           | chr1:24173047-24176244 REVERSE LENGTH=876
          Length = 876

 Score = 77.4 bits (189), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 96/172 (55%), Gaps = 10/172 (5%)

Query: 778 IQICSGRHPVLETTL------QDNF-VPNDTNMHADREYCQIVTGPNMGGKSCYVRQVAL 830
           + I S +HP+L  ++       D F VP D  + +  +   +++GPN GGK+  ++ + L
Sbjct: 359 VDIDSAQHPLLLGSVLGSPNGGDIFPVPVDIKVESSAKVV-VISGPNTGGKTALLKTLGL 417

Query: 831 IAVMAQVGSFVPASSA-KLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILHSCTERS 889
           +++M++ G ++PA +  +L   D I   +G   S++Q  STF   +S    IL   +E S
Sbjct: 418 LSLMSKSGMYLPAKNCPRLPWFDLILADIGDPQSLEQSLSTFSGHISRIRQILDIASENS 477

Query: 890 LVIIDELGRGTSTHDGMAIAYATLHYLLKQKKSMALFVTHYPKIASLVAEFP 941
           LV++DE+  GT   +G+A+A + L Y +K + ++A+  THY  ++ L    P
Sbjct: 478 LVLLDEICSGTDPSEGVALATSILQY-IKNRVNVAVVSTHYGDLSRLKDNEP 528


>AT1G65070.1 | Symbols:  | DNA mismatch repair protein MutS, type 2
           | chr1:24173132-24176244 REVERSE LENGTH=857
          Length = 857

 Score = 77.0 bits (188), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 96/172 (55%), Gaps = 10/172 (5%)

Query: 778 IQICSGRHPVLETTL------QDNF-VPNDTNMHADREYCQIVTGPNMGGKSCYVRQVAL 830
           + I S +HP+L  ++       D F VP D  + +  +   +++GPN GGK+  ++ + L
Sbjct: 359 VDIDSAQHPLLLGSVLGSPNGGDIFPVPVDIKVESSAKVV-VISGPNTGGKTALLKTLGL 417

Query: 831 IAVMAQVGSFVPASSA-KLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILHSCTERS 889
           +++M++ G ++PA +  +L   D I   +G   S++Q  STF   +S    IL   +E S
Sbjct: 418 LSLMSKSGMYLPAKNCPRLPWFDLILADIGDPQSLEQSLSTFSGHISRIRQILDIASENS 477

Query: 890 LVIIDELGRGTSTHDGMAIAYATLHYLLKQKKSMALFVTHYPKIASLVAEFP 941
           LV++DE+  GT   +G+A+A + L Y +K + ++A+  THY  ++ L    P
Sbjct: 478 LVLLDEICSGTDPSEGVALATSILQY-IKNRVNVAVVSTHYGDLSRLKDNEP 528