Miyakogusa Predicted Gene

Lj5g3v2013430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2013430.1 Non Chatacterized Hit- tr|I0Z574|I0Z574_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,66.13,7e-18,seg,NULL,
gene.Ljchr5_pseudomol_20120830.path1.gene5529.1
         (158 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G20850.1 | Symbols: TPP2 | tripeptidyl peptidase ii | chr4:11...   105   1e-23

>AT4G20850.1 | Symbols: TPP2 | tripeptidyl peptidase ii |
           chr4:11160935-11169889 REVERSE LENGTH=1380
          Length = 1380

 Score =  105 bits (263), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/65 (72%), Positives = 55/65 (84%)

Query: 93  KLNESTFLASLMPKTEIGVDRFLHSHPYYDGRGALIAIFDSGVDPAATGLQVTSDGKPKI 152
           KLNESTF+ASLMPK EI  D F+ +HP YDGRG +IAIFDSG DP+A GL VTSDGKPK+
Sbjct: 106 KLNESTFIASLMPKKEIRADCFIEAHPEYDGRGVVIAIFDSGFDPSAAGLHVTSDGKPKV 165

Query: 153 LDILD 157
           LD++D
Sbjct: 166 LDVID 170