Miyakogusa Predicted Gene

Lj5g3v1988600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1988600.1 Non Chatacterized Hit- tr|C6TB33|C6TB33_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,39.26,4e-19,DUF4228,Protein of unknown function DUF4228;
seg,NULL,CUFF.56417.1
         (212 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G64700.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   124   4e-29
AT3G61920.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    95   3e-20

>AT1G64700.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN: N-terminal
           protein myristoylation; LOCATED IN: cellular_component
           unknown; EXPRESSED IN: 17 plant structures; EXPRESSED
           DURING: 11 growth stages; BEST Arabidopsis thaliana
           protein match is: unknown protein (TAIR:AT3G61920.1);
           Has 48 Blast hits to 47 proteins in 7 species: Archae -
           0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48;
           Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
           | chr1:24039931-24040542 REVERSE LENGTH=203
          Length = 203

 Score =  124 bits (312), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 99/187 (52%), Gaps = 15/187 (8%)

Query: 1   MGNCFLGAMADPDA-AAIKVTTSNGGIMEFNAPVTVSSITSEFPGHAMFRSHDLFWKPLS 59
           MGNC  G + D +    IKV  S+GG++EF +PVT   ++  F GHA+F + DL WKPL+
Sbjct: 1   MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLA 60

Query: 60  QFDELEAGKSYYLLPLNNNNIEITSSDVVRQGHVRSHSVPTTSHPAPYRMSLDYQHHQQG 119
               L  G+SYYL P   N +       V   HVRS+S  + S   PYRMSLDY H    
Sbjct: 61  HDHLLVPGQSYYLFP---NIVSDELKTFVGSCHVRSNS-ESLSAITPYRMSLDYNHRVLK 116

Query: 120 MGLL----KNSVAXXXXXXXXXXXXR------FWKVKLVISPEQLVDILAQEARTKELME 169
                   +NS              R       WKV L+I+ E+L+ IL+++ RT EL+E
Sbjct: 117 RSYTDVFSRNSHIRTRQKEKKTRRRRTSSKGAIWKVNLIINTEELLQILSEDGRTNELIE 176

Query: 170 SVRIVAK 176
           SVR VAK
Sbjct: 177 SVRAVAK 183


>AT3G61920.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN: N-terminal
           protein myristoylation; LOCATED IN: cellular_component
           unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell;
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77
           proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa
           - 0; Fungi - 0; Plants - 77; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr3:22932638-22933201 REVERSE LENGTH=187
          Length = 187

 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 89/187 (47%), Gaps = 41/187 (21%)

Query: 1   MGNCFLGA------MADPDAAAIKVTTSNGGIMEFNAPVTVSSITSEFPGHAMFRSHDLF 54
           MGNC          + D D + IKV T NGG+ME + P+    IT+EFPGH +  S  L 
Sbjct: 1   MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLR 60

Query: 55  WK--PLSQFDELEAGKSYYLLPLNNN---NIEITSSDVVRQGHVRSHSVPTTSHPAPYRM 109
               PL   +EL  G  YYLLPL+++     ++ SSD +                 PYRM
Sbjct: 61  HSSPPLLHGEELFPGNIYYLLPLSSSAAATAQLDSSDQLS---------------TPYRM 105

Query: 110 SLDYQHHQQGMGLLKNSVAXXXXXXXXXXXXRFWKVKLVISPEQLVDILAQEARTKELME 169
           S         +      V               WKV+LVISPEQL +ILA++  T+ L+E
Sbjct: 106 SFGKTPIMAALSGGGCGV---------------WKVRLVISPEQLAEILAEDVETEALVE 150

Query: 170 SVRIVAK 176
           SVR VAK
Sbjct: 151 SVRTVAK 157