Miyakogusa Predicted Gene

Lj5g3v1950960.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1950960.1 Non Chatacterized Hit- tr|I1LDH1|I1LDH1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48015
PE,76.92,0,PORR,Plant organelle RNA recognition domain; seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NU,CUFF.56233.1
         (418 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31290.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   509   e-144
AT2G31290.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   509   e-144
AT3G63090.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   207   8e-54
AT4G01037.1 | Symbols: WTF1, AtWTF1 | Ubiquitin carboxyl-termina...   165   6e-41
AT5G21970.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   158   9e-39
AT5G48040.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   152   5e-37
AT1G79120.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   145   4e-35
AT3G58520.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   143   3e-34
AT4G33495.1 | Symbols: RPD1 | Ubiquitin carboxyl-terminal hydrol...   140   1e-33
AT3G58520.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   138   7e-33
AT4G08940.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   135   8e-32
AT1G71850.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   127   2e-29
AT5G62990.1 | Symbols: emb1692 | Ubiquitin carboxyl-terminal hyd...   126   2e-29
AT1G06440.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   124   1e-28
AT5G45790.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   121   8e-28
AT5G45790.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   119   3e-27
AT2G39120.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   118   7e-27
AT4G24320.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase ...   108   7e-24

>AT2G31290.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr2:13344151-13345398 FORWARD
           LENGTH=415
          Length = 415

 Score =  509 bits (1310), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 258/418 (61%), Positives = 314/418 (75%), Gaps = 9/418 (2%)

Query: 2   ITFTRRIHHHLHPTASPQGQWLRRTFCLWSSKKDPDLETALSRNRRWVVNNQIKNIILRY 61
           +  TR ++  L    +P    L R F LWS+KKDPDLE+ALSRN+RW+VN+++KNIILR 
Sbjct: 1   MAMTRELYRILGTKYAP---LLIRRFSLWSTKKDPDLESALSRNKRWIVNSRLKNIILRC 57

Query: 62  PNNEIPIEALQKKFKTLDLQGKALNWVSKYPCCFDVH----QRRCRLTKRMMSLVDEELS 117
           PN    I+ LQKKFKTLDLQGKALNW+ KYPCCF V+    +  CRLTK MM+LV+EE  
Sbjct: 58  PNQVASIKFLQKKFKTLDLQGKALNWLKKYPCCFHVYLENDEYYCRLTKPMMTLVEEEEL 117

Query: 118 LKDSLEPVFVRRLAKLLMMSFNKRLNVLKINEFKRNFGFPDDYLIRIVPKYPDLFRIVSE 177
           +KD+ EPV   RLAKLLM+S N+RLNV+K+NEFKR+FGFPDDY+IRIVPKY D+FR+V+ 
Sbjct: 118 VKDTQEPVLADRLAKLLMLSVNQRLNVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNY 177

Query: 178 SGRRSSMEVELLHWDPDFAVSAVEGLARKNGDGAEPGFSCLLPLSWVKSWERFHKFESVP 237
           SGR+SSME+ELL W P+ AVSAVE  A+K G  +EP FSC LP +W K WERF +F + P
Sbjct: 178 SGRKSSMEIELLLWKPELAVSAVEAAAKKCG--SEPSFSCSLPSTWTKPWERFMEFNAFP 235

Query: 238 YVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKCSIVKLGHFRREFLLPDRLNVLL 297
           Y+SPY D   LVEGSKE EKR+VGLVHELLSLTLWKK SIVKL HF+REF LP++LN +L
Sbjct: 236 YISPYEDHGDLVEGSKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGML 295

Query: 298 LKHPGIFYVSNKYKIYTVLLREAYVGSQLVEKDPLVVVKEKFGELMQEGLHEYNQRRRIR 357
           LKHPGIFYV NKY+++TV+LRE Y GS+L+ KDPLVVVK+KFGELMQ+GL+EYN RR + 
Sbjct: 296 LKHPGIFYVGNKYQVHTVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLA 355

Query: 358 NLEKRRTKGVPFARADETKGGXXXXXXXXXXXXXXXXXVRGLLDPEERKRFYKALFDD 415
           NLEK+R KG+   +    K                     GL DPEERKRFY+ LF D
Sbjct: 356 NLEKKREKGIESLKPVVRKKDRNHDRDDVDEEENHGDRPGGLFDPEERKRFYQILFSD 413


>AT2G31290.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr2:13344151-13345398 FORWARD
           LENGTH=415
          Length = 415

 Score =  509 bits (1310), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 258/418 (61%), Positives = 314/418 (75%), Gaps = 9/418 (2%)

Query: 2   ITFTRRIHHHLHPTASPQGQWLRRTFCLWSSKKDPDLETALSRNRRWVVNNQIKNIILRY 61
           +  TR ++  L    +P    L R F LWS+KKDPDLE+ALSRN+RW+VN+++KNIILR 
Sbjct: 1   MAMTRELYRILGTKYAP---LLIRRFSLWSTKKDPDLESALSRNKRWIVNSRLKNIILRC 57

Query: 62  PNNEIPIEALQKKFKTLDLQGKALNWVSKYPCCFDVH----QRRCRLTKRMMSLVDEELS 117
           PN    I+ LQKKFKTLDLQGKALNW+ KYPCCF V+    +  CRLTK MM+LV+EE  
Sbjct: 58  PNQVASIKFLQKKFKTLDLQGKALNWLKKYPCCFHVYLENDEYYCRLTKPMMTLVEEEEL 117

Query: 118 LKDSLEPVFVRRLAKLLMMSFNKRLNVLKINEFKRNFGFPDDYLIRIVPKYPDLFRIVSE 177
           +KD+ EPV   RLAKLLM+S N+RLNV+K+NEFKR+FGFPDDY+IRIVPKY D+FR+V+ 
Sbjct: 118 VKDTQEPVLADRLAKLLMLSVNQRLNVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNY 177

Query: 178 SGRRSSMEVELLHWDPDFAVSAVEGLARKNGDGAEPGFSCLLPLSWVKSWERFHKFESVP 237
           SGR+SSME+ELL W P+ AVSAVE  A+K G  +EP FSC LP +W K WERF +F + P
Sbjct: 178 SGRKSSMEIELLLWKPELAVSAVEAAAKKCG--SEPSFSCSLPSTWTKPWERFMEFNAFP 235

Query: 238 YVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKCSIVKLGHFRREFLLPDRLNVLL 297
           Y+SPY D   LVEGSKE EKR+VGLVHELLSLTLWKK SIVKL HF+REF LP++LN +L
Sbjct: 236 YISPYEDHGDLVEGSKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGML 295

Query: 298 LKHPGIFYVSNKYKIYTVLLREAYVGSQLVEKDPLVVVKEKFGELMQEGLHEYNQRRRIR 357
           LKHPGIFYV NKY+++TV+LRE Y GS+L+ KDPLVVVK+KFGELMQ+GL+EYN RR + 
Sbjct: 296 LKHPGIFYVGNKYQVHTVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLA 355

Query: 358 NLEKRRTKGVPFARADETKGGXXXXXXXXXXXXXXXXXVRGLLDPEERKRFYKALFDD 415
           NLEK+R KG+   +    K                     GL DPEERKRFY+ LF D
Sbjct: 356 NLEKKREKGIESLKPVVRKKDRNHDRDDVDEEENHGDRPGGLFDPEERKRFYQILFSD 413


>AT3G63090.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr3:23313617-23314831 FORWARD
           LENGTH=404
          Length = 404

 Score =  207 bits (528), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/384 (33%), Positives = 212/384 (55%), Gaps = 24/384 (6%)

Query: 6   RRIHHHLHPTASPQGQWLRRTFCLWSSKKDPDLETALSRNRRWVVNNQIKNIILRYPNNE 65
           + + H    +   Q +W+     +W  KKD  L+ A+ +++R+ +  ++   +L  P   
Sbjct: 14  KSLKHAKEHSLGIQIRWISSLKVVW--KKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQV 71

Query: 66  IPIEALQKKFKTLDLQGKALNWVSKYPCCFDVHQRRC----------RLTKRMMSLVDEE 115
           IP+  L+K+ + L L  KA ++V   P  F+++  R           R T R+ + +DEE
Sbjct: 72  IPLRYLEKRRERLRLTFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEE 131

Query: 116 LSLKDSLEPVFVRRLAKLLMMSFNKRLNVLKINEFKRNFGFPDDYLIRIVPKYPDLFRIV 175
             +    EP+ V +L +LLMM+ +K ++  K+   KR+FGFP+D+L+++V KYP+ FR+ 
Sbjct: 132 QRIYSENEPLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLT 191

Query: 176 SESGRRSSMEVELLHWDPDFAVSAVEGLAR----KNGDGAEPGFSCLLPLSW-----VKS 226
                  S  +EL+ W+PDFA S +E  A     K G    P ++  LP  +     ++ 
Sbjct: 192 GLPEEGKSF-LELVSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLRKEMRE 250

Query: 227 WERFHKFESVPYVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKCSIVKLGHFRRE 286
           W R   +    Y+SPY D   L + SKEMEKR VG+VHELLSL+L K+  +  LG F  E
Sbjct: 251 WTR--DWLEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDE 308

Query: 287 FLLPDRLNVLLLKHPGIFYVSNKYKIYTVLLREAYVGSQLVEKDPLVVVKEKFGELMQEG 346
           F   +  + +  +H GIFY+S K  I T +LREAY   +LV++DPL+ +K+KF  L++EG
Sbjct: 309 FRFSNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLLEEG 368

Query: 347 LHEYNQRRRIRNLEKRRTKGVPFA 370
             E   R +++  + ++ + +  A
Sbjct: 369 WQERKDRLKLQREQVQKDREMMLA 392


>AT4G01037.1 | Symbols: WTF1, AtWTF1 | Ubiquitin carboxyl-terminal
           hydrolase family protein | chr4:451444-453030 REVERSE
           LENGTH=528
          Length = 528

 Score =  165 bits (417), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 181/333 (54%), Gaps = 26/333 (7%)

Query: 33  KKDPDLETALSRNRRWVVNNQIKNIILRYPNNEIPIEALQKKFKTLDLQGKA--LNWVSK 90
           +K+   ++ + R+++  +   I+ I++  P+  + +  L K  + L L+ +   +  + K
Sbjct: 79  RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138

Query: 91  YPCCFDV-----HQRRCRLTKRMMSLVDEELSLKDSLEPVFVRRLAKLLMMSFNKRLNVL 145
           YP  F++     +  R ++T     L  +E+ +++ LE V V +L KL+MMS +KR+ + 
Sbjct: 139 YPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLE 198

Query: 146 KINEFKRNFGFPDDYLIRIVPKYPDLFRIVSESGRRSSMEVELLHWDPDFAVSAVEGLAR 205
           KI+  K + G P ++   I  +YP  FR+V          +EL HWDP+ AVSA E L+ 
Sbjct: 199 KISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP---RGPALELTHWDPELAVSAAE-LSE 254

Query: 206 KNGDGAE-----------PGFSCL-LP--LSWVKSWER-FHKFESVPYVSPYSDPRGLVE 250
            +    E           P F+ + LP  L+  KS  R   +F  + Y+SPY D   L  
Sbjct: 255 DDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRS 314

Query: 251 GSKEMEKRNVGLVHELLSLTLWKKCSIVKLGHFRREFLLPDRLNVLLLKHPGIFYVSNKY 310
           G+ E EK   G++HELLSLT  K+  +  L HFR EF    +L  +L++HP +FYVS K 
Sbjct: 315 GTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKG 374

Query: 311 KIYTVLLREAYVGSQLVEKDPLVVVKEKFGELM 343
           +  +V LREAY  S+L++KDPL +VKEK   L+
Sbjct: 375 ERDSVFLREAYRNSELIDKDPLTLVKEKMRALV 407


>AT5G21970.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr5:7262071-7263420 FORWARD LENGTH=449
          Length = 449

 Score =  158 bits (399), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 153/272 (56%), Gaps = 17/272 (6%)

Query: 83  KALNWVSKYPCCFDVHQRR-----CRLTKRMMSLVDEELSLKDSLEPVFVRRLAKLLMMS 137
           K  +++ K P  F++++ +     C LT+    L+DE   L +         + + LMMS
Sbjct: 108 KISDFIRKSPKLFELYKDQRGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMS 167

Query: 138 FNKRLNVLKINEFKRNFGFPDDYLIRIVPKYPDLFRIVSESGRRSSMEVELLHWDPDFAV 197
            +K+L + KI  F+R+FG P D+ I  V  +P  F++V        +E  L+ W+P +A+
Sbjct: 168 VDKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEEYLE--LVSWNPAWAI 225

Query: 198 SAVEGLARKNGDGAE--PG-FSCLLPLSWVKSWERFHK-------FESVPYVSPYSDPRG 247
           + +E       +  E  PG  S   P+ +  S+++ ++       F+   Y+SPY+D RG
Sbjct: 226 TELEKKTLGITEDCEHKPGMLSLAFPMKFPPSYKKMYRYRGKIEHFQKRSYLSPYADARG 285

Query: 248 LVEGSKEMEKRNVGLVHELLSLTLWKKCSIVKLGHFRREFLLPDRLNVLLLKHPGIFYVS 307
           L  GSKE +KR + ++HELLS TL K+     L HFRREF++P +L  + LKH GIFYVS
Sbjct: 286 LEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKHCGIFYVS 345

Query: 308 NKYKIYTVLLREAYVGSQLVEKDPLVVVKEKF 339
            + K ++V L E Y G +L+EK PL++ KEK 
Sbjct: 346 ERGKRFSVFLTEGYEGPELIEKCPLILWKEKL 377


>AT5G48040.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr5:19470461-19471729 FORWARD
           LENGTH=422
          Length = 422

 Score =  152 bits (384), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 163/334 (48%), Gaps = 29/334 (8%)

Query: 34  KDPDLETALSRNRRWVVNNQIKNIILRYPNNEIPIEALQKKFKTLDL--QGKALNWVSKY 91
           KD +L+  + R +       + ++I   P+  +PI  L      L L  + K   ++ +Y
Sbjct: 41  KDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELKLSAFIRRY 100

Query: 92  PCCFDVH--------QRRC-RLTKRMMSLVDEELSLKDSLEPVFVRRLAKLLMMSFNKRL 142
           P  F  H           C  LT+  + L  EE+ +    E   + RL KLLM++  + L
Sbjct: 101 PNIFVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDVSRVNERDVLVRLCKLLMLTCERTL 160

Query: 143 NVLKINEFKRNFGFPDDYLIRIVPKYPDLFRIVSESGRRSSMEVELLHWDPDFAVSAVEG 202
           ++  I+  + + G P DY   ++ K+PDLF +V  S     ++  L+HWD   AVS ++ 
Sbjct: 161 SLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDGLK--LIHWDEHLAVSQMQ- 217

Query: 203 LARKNGDGAEPGFSCLL---------PLSWVKSWERFHKFESVPYVSPYSDPRGLVEGSK 253
           L    G+     F              + W++ W+R      +PY SPY D   L   + 
Sbjct: 218 LREDVGNDERMAFPVKFTRGFGLKRKSIEWLQEWQR------LPYTSPYVDASHLDPRTD 271

Query: 254 EMEKRNVGLVHELLSLTLWKKCSIVKLGHFRREFLLPDRLNVLLLKHPGIFYVSNKYKIY 313
             EKRNVG+ HELL LT+ KK     + + R+ F LP +   +  +HPGIFY+S K    
Sbjct: 272 LSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGIFYISMKCDTQ 331

Query: 314 TVLLREAYVGSQLVEKDPLVVVKEKFGELMQEGL 347
           TV+LREAY    L+EK PLV V+EKF  +M EG 
Sbjct: 332 TVILREAYDRRHLIEKHPLVEVREKFANMMNEGF 365


>AT1G79120.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr1:29767314-29768555 REVERSE
           LENGTH=413
          Length = 413

 Score =  145 bits (367), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 166/332 (50%), Gaps = 30/332 (9%)

Query: 37  DLETALSRNRRWVVNNQIKNIILRYPNNEIPIEALQKKFKTLDLQGKALNWVSKYPCCFD 96
           DL+ A+  N++  +  Q+K+II    +  + +  L+K    +  +   +  + KYP  F 
Sbjct: 67  DLDKAIDLNKKPSLILQLKSIIQAQKHGSLLLRDLEKHVGFVH-KWNLMAAIEKYPTIFY 125

Query: 97  V---HQRR--CRLTKRMMSLVDEELSLKDSLEPVFVRRLAKLLMMSFNKRLNVLKINEFK 151
           V   H+      LT++   +  EE    +S+EP+ V  L KLLMMS + R+ + K+   +
Sbjct: 126 VGGGHKEPPFVMLTEKAKKIAAEESEATESMEPILVNNLRKLLMMSVDCRVPLEKVEFIQ 185

Query: 152 RNFGFPDDYLIRIVPKYPDLFRIVSESGRRSSMEVELLHWDPDFAVSAVE------GLAR 205
              G P D+   ++PKY + F +   +G+   + + L +WD   A++A E      G + 
Sbjct: 186 SAMGLPQDFKSTLIPKYTEFFSLKVINGK---VNLVLENWDSSLAITAREDRLSREGFSE 242

Query: 206 KNGDG------------AEPGFSCLLPLSW---VKSWERFHKFESVPYVSPYSDPRGLVE 250
             GD                 F    P  +       E F K++ + + SPY + R    
Sbjct: 243 SVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNASYLEEFEKWQKMEFPSPYLNARRFDA 302

Query: 251 GSKEMEKRNVGLVHELLSLTLWKKCSIVKLGHFRREFLLPDRLNVLLLKHPGIFYVSNKY 310
              +  KR V ++HELLSLT+ K+ +  +L  F  E+LLP RL + L+KH GIFY++NK 
Sbjct: 303 ADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYLLPSRLILCLIKHQGIFYITNKG 362

Query: 311 KIYTVLLREAYVGSQLVEKDPLVVVKEKFGEL 342
              TV L++AY GS L+EK PL++  ++F  L
Sbjct: 363 ARGTVFLKDAYAGSNLIEKCPLLLFHDRFVAL 394


>AT3G58520.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr3:21643921-21645277 REVERSE
           LENGTH=418
          Length = 418

 Score =  143 bits (360), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 159/319 (49%), Gaps = 29/319 (9%)

Query: 54  IKNIILRYPNNEIPIEALQKKFKTLDLQGKALNWVSKYPCCFDV--HQRRC-----RLTK 106
           +K+ I R P   +  +++    K L L    L ++ +YP  F    H R       +LT 
Sbjct: 57  LKDAIKRSPTGFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFHEFPHARYASLPCFKLTD 116

Query: 107 RMMSLVDEELSLKDSLEPVFVRRLAKLLMMSFNKRLNVLKINEFKRNFGFPDDYLIRIVP 166
             + L  +E  +  S E   V RL ++LMM  +K +++  ++  K + G PD+Y   +V 
Sbjct: 117 TALMLDSQEEIIHQSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVM 176

Query: 167 KYPDLFRIVSESGRRSSMEVELLHWDPDFAVSAVEGLARKNGDGAEP--------GFSCL 218
           KYPD F  V  S     ++  L+ W  +FA SA++     N    E         G S L
Sbjct: 177 KYPDHFCFVKASNGNPCLK--LVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTL 234

Query: 219 -LPLSW---------VKSWERFHKFESVPYVSPYSDPRGLVEGSKEMEKRNVGLVHELLS 268
             P+S+         VK+W    +F+ +PY+SPY DP  +   S  MEKR V ++HELLS
Sbjct: 235 TFPMSFPRGYGAQKKVKAW--MDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLS 292

Query: 269 LTLWKKCSIVKLGHFRREFLLPDRLNVLLLKHPGIFYVSNKYKIYTVLLREAYVGSQLVE 328
           LT+ KK     L   R E  +P +   L  ++PGIFY+S K K  TV+L+E Y   +LV+
Sbjct: 293 LTIHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVD 352

Query: 329 KDPLVVVKEKFGELMQEGL 347
             PL  +++KF  +M+ G 
Sbjct: 353 PHPLTRLRDKFYHVMRTGF 371


>AT4G33495.1 | Symbols: RPD1 | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr4:16111349-16112578 REVERSE
           LENGTH=409
          Length = 409

 Score =  140 bits (354), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 161/319 (50%), Gaps = 37/319 (11%)

Query: 56  NIILRYPNNEIPIEALQKKFKTLDL---QGKALNWVSKYPCCFDVHQR------RCRLTK 106
           ++IL  PN+ I I  L    + L L   Q +   ++ K+P  F++++        CRLT+
Sbjct: 70  SLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTR 129

Query: 107 RMMSLVDEELSLKDSLEPVFVRRLAKLLMMSFNKRLNVLKINEFKRNFGFPDDYLIRIVP 166
           + +  +  E        P  V RL KL+MMS   R+ +  +   +  FG P+D+   ++ 
Sbjct: 130 KALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVIL 189

Query: 167 KYPDLFRIVSESGRRSSMEVELLHWDPDFAVSAVEGL----ARKNGDGAE---------- 212
           K+P  FR++     R    +E++  DP+ ++ A+E +     R  G  AE          
Sbjct: 190 KHPQFFRLIDGEETRDKY-IEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNF 248

Query: 213 -PGFSCLLPLSWVKSWERFHKFESVPYVSPYSDPRGL----VEGSKEMEKRNVGLVHELL 267
            PGF  +     +  W    K++ +PY SPY D  G     +E    +EKR+V  +HELL
Sbjct: 249 PPGFK-IGKYFRIAVW----KWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELL 303

Query: 268 SLTLWKKCSIVKLGHFRREFLLPDRLNVLLLKHPGIFYVS---NKYKIYTVLLREAYVGS 324
           SLT+ KK ++ ++ HFR    LP +L   LL+H GIFY+S   N  K++TV LRE Y   
Sbjct: 304 SLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRG 363

Query: 325 QLVEKDPLVVVKEKFGELM 343
           +LVE + + + + +  EL+
Sbjct: 364 ELVEPNDVYLARRRLAELV 382


>AT3G58520.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr3:21643921-21645277 REVERSE
           LENGTH=406
          Length = 406

 Score =  138 bits (347), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 144/286 (50%), Gaps = 29/286 (10%)

Query: 87  WVSKYPCCFDV--HQRRC-----RLTKRMMSLVDEELSLKDSLEPVFVRRLAKLLMMSFN 139
           W  +YP  F    H R       +LT   + L  +E  +  S E   V RL ++LMM  +
Sbjct: 78  WNKRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRVLMMMRS 137

Query: 140 KRLNVLKINEFKRNFGFPDDYLIRIVPKYPDLFRIVSESGRRSSMEVELLHWDPDFAVSA 199
           K +++  ++  K + G PD+Y   +V KYPD F  V  S     ++  L+ W  +FA SA
Sbjct: 138 KTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLK--LVKWRDEFAFSA 195

Query: 200 VEGLARKNGDGAEP--------GFSCL-LPLSW---------VKSWERFHKFESVPYVSP 241
           ++     N    E         G S L  P+S+         VK+W    +F+ +PY+SP
Sbjct: 196 LQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAW--MDEFQKLPYISP 253

Query: 242 YSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKCSIVKLGHFRREFLLPDRLNVLLLKHP 301
           Y DP  +   S  MEKR V ++HELLSLT+ KK     L   R E  +P +   L  ++P
Sbjct: 254 YDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTRYP 313

Query: 302 GIFYVSNKYKIYTVLLREAYVGSQLVEKDPLVVVKEKFGELMQEGL 347
           GIFY+S K K  TV+L+E Y   +LV+  PL  +++KF  +M+ G 
Sbjct: 314 GIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGF 359


>AT4G08940.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr4:5730986-5732173 REVERSE LENGTH=395
          Length = 395

 Score =  135 bits (339), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/322 (34%), Positives = 167/322 (51%), Gaps = 20/322 (6%)

Query: 32  SKKDPDLETALSRNRRWVVNNQIKNIILRYPNNEIPIEALQKKFKTLDL-QG-KALNWVS 89
           S K P LE+ +SR+  +    + K  I + P   + ++   K ++ L   +G K   ++ 
Sbjct: 65  STKLPHLESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRKVTKFIP 124

Query: 90  KYPCCFDVHQRR-----CRLTKRMMSLVDEELSLKDSLEPVFVRRLAKLLMMSFNKRLNV 144
           K+P  F  ++          T+ M  L+DEE  L +S+E   V  + KLLMM+ +KR+ +
Sbjct: 125 KHPLIFQTYRHSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTKDKRILL 184

Query: 145 LKINEFKRNFGFPDDYLIRIVPKYPDLFRIVSESGRRSSMEVELLHWDPDFAVSAVEGLA 204
            KI+  +  FG P+D+  R V KYPD FR+V+  G   +  +EL++WD + AVS +E L 
Sbjct: 185 SKIHHTRLLFGIPEDFRDR-VAKYPDYFRVVT--GGDGNRVLELVNWDTNLAVSELERLF 241

Query: 205 RKNGDGAEPGFSCLLPLSWVKSWE-------RFHKFESVPYVSPYSDPRGLVEGSKEMEK 257
             + D A+  F    P+   K  E       + +   + P VSPYSD   L   S E EK
Sbjct: 242 MIDEDKAKRVFK--FPVKHGKELELEEKDTRKLNLLNTFPLVSPYSDGWKLDVWSLEAEK 299

Query: 258 RNVGLVHELLSLTLWKKCSIVKLGHFRREFLLPDRLNVLLLKHPGIFYVSNKYKIYTVLL 317
             VG+VHE L+LTL K+ SI  +  F+ EF L  +   +L K    FY++     +TV L
Sbjct: 300 YRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNWTVFL 359

Query: 318 REAY-VGSQLVEKDPLVVVKEK 338
           ++AY     LV KDP VV  EK
Sbjct: 360 KDAYDENGVLVSKDPQVVFNEK 381


>AT1G71850.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr1:27024875-27026287 REVERSE
           LENGTH=470
          Length = 470

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 171/370 (46%), Gaps = 49/370 (13%)

Query: 34  KDPDLETALSRNRRWVVNNQIKNIILRYPNNEIPIEALQKKFKTLDLQGKALNWVSKYPC 93
           +D  L+ A+ R +       IK++I   P   +PI  +  +  +L +  + + ++  +P 
Sbjct: 33  RDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPLRPIEFIRSFPS 92

Query: 94  CFD--------VHQRRCRLTKRMMSLVDEELSL-KDSLEPVFVRRLAKLLMMSFNKRLNV 144
            F         +H       + +    DE+L    ++ +     RL KLLM++   ++ +
Sbjct: 93  VFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLLMINRINKIPL 152

Query: 145 LKINEFKRNFGFPDDYLIRIVPKYPDLFRIVSESGRRSSMEVELLHWDPDFAVSAVEGLA 204
             ++  K + G P DY+  +VP++PD FR++    R  S E+EL+ W  + AVS +E  A
Sbjct: 153 EILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGELELVCWSNEHAVSVLEKKA 212

Query: 205 RKNGDGA-EPGFSCLLPLS-------------WVKSWERFHKFESVPYVSPYSDPRGLVE 250
           R    G    G +   P+              W+  W++      +PY+SPY +   L  
Sbjct: 213 RTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDWQK------LPYISPYENALHLSA 266

Query: 251 GSKEMEKRNVGLVHELLSLTLWKKC---SIVKLGHFRREFLLPDRLNVLLLKHPGIFYVS 307
            S E +K    ++HE+++L + KK    +I+ LG F     L  R   +L  HPGIFY+S
Sbjct: 267 TSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEF---MGLRSRFKRVLHNHPGIFYLS 323

Query: 308 NKYKIYTVLLREAYVGSQLVEKDPLVVVKEKFGELMQEGLHEYNQRRRIRNLEKRRTKGV 367
           +K + +TV+LR+ Y    L+E + LV  + ++ +LM              N  K+  K V
Sbjct: 324 SKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLM--------------NTVKKDNKAV 369

Query: 368 PFARADETKG 377
             +   E KG
Sbjct: 370 SSSSKKEDKG 379


>AT5G62990.1 | Symbols: emb1692 | Ubiquitin carboxyl-terminal
           hydrolase family protein | chr5:25277828-25279312
           FORWARD LENGTH=494
          Length = 494

 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 165/343 (48%), Gaps = 42/343 (12%)

Query: 34  KDPDLETALSRNRRWVVNNQIKNIILRYPNNEIPIEALQKKFKTLDLQG--KALNWVSKY 91
           + P L+  + +  R     ++  ++L  P + IPIE L K    L ++     L+ + +Y
Sbjct: 61  RSPSLDRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRY 120

Query: 92  PCCFDV----------------HQRRCRLTKRMMSLVDEELSLKDSLEPVFVRRLAKLLM 135
           P  F++                 Q   RLT    SL  +EL+LK  +      +L KLLM
Sbjct: 121 PTIFELFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLM 180

Query: 136 MSFNKRLNVLKINEFKRNFGFPDDYLIRIVPKYPDLFRIVSESGRRSSMEVELLHWDPDF 195
           +S ++RL + K+     +FGFP ++  R+   YPD F+ V  S  R+   +EL+  DP+ 
Sbjct: 181 LSSHRRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRA---LELVSSDPEL 237

Query: 196 AVSAVEGLARKNGDGAEPGFSCLLPLSWVK-------SWERFH-----KFESVPYVSPYS 243
           A        +      + G     PL + +       + +R H     KF   P V PY 
Sbjct: 238 A-------NQMPSPEVDRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYK 290

Query: 244 -DPRGLVEGSKEMEKRNVGLVHELLSLTLWKKCSIVKLGHFRREFLLPDRLNVLLLKHPG 302
                L   S E EKR   +V E+L LT+ K+  I  L HFR+EF LP++L  L+++HP 
Sbjct: 291 MSSDYLASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPE 350

Query: 303 IFYVSNKYKIYTVLLREAYV-GSQLVEKDPLVVVKEKFGELMQ 344
           +FYVS K    +V L EAY     L++KD  +V++E+  +L+Q
Sbjct: 351 LFYVSIKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQ 393


>AT1G06440.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr1:1963733-1964905 REVERSE LENGTH=390
          Length = 390

 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 160/350 (45%), Gaps = 39/350 (11%)

Query: 31  SSKKDPDLETALSRNRRWVVNNQIKNIILRYPNNEIP---IEALQKKFKTLDLQGKALNW 87
           S  +DP  E  + + +  +    I+++ L  P  + P   IE L +  + L L   A ++
Sbjct: 33  SRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQKLHLNRGAASF 92

Query: 88  VSKYPCCFDV------HQRRCRLTKRMMSLVDEELSLKDSLEPVFVRRLAKLLMMSFNKR 141
           + KYP  F V       +  CRLT   M +  +E     +   + V RL +LL MS +K 
Sbjct: 93  LRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRLVRLLSMSISKS 152

Query: 142 LNVLKINEFKRNFGFPDDYLIRIVPKYPDLFRI-------------VSESGRRSSMEVEL 188
           + +  + +  R  G PDD+   ++ K P LF++             V E  +R   E  +
Sbjct: 153 IPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQEEEKRLEFEAAV 212

Query: 189 LHW------DPDFAVSAVEGLARKNGDGAEPGFSCLLPL-SWVKSWERFHKFESVPYVSP 241
             W        D +V   E +         PG        + VK W+R      +PYV P
Sbjct: 213 EKWRVVECSKEDCSVDRTE-IQFSFKHSYPPGMRLSKTFKAKVKEWQR------LPYVGP 265

Query: 242 YSDPRGLVE---GSKEMEKRNVGLVHELLSLTLWKKCSIVKLGHFRREFLLPDRLNVLLL 298
           Y D  G  +   G   +EKR V + HE L+LT+ K   + K+ HFR+ F +   +  L L
Sbjct: 266 YEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNIRDLFL 325

Query: 299 KHPGIFYVSNKYKIYTVLLREAYVGSQLVEKDPLVVVKEKFGELMQEGLH 348
            HPG+FYVS K K +TV LREAY   +L++ +P+   + K  +L+  G H
Sbjct: 326 DHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRH 375


>AT5G45790.2 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr5:18572345-18573664 FORWARD
           LENGTH=439
          Length = 439

 Score =  121 bits (304), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 170/357 (47%), Gaps = 46/357 (12%)

Query: 12  LHPTASPQGQWLRRTFCLWSSKKDPDLETALSRNRRWVVNNQIKNIILRYPNNEIPIEAL 71
           L P  S Q +   RT       +D  L+  + + R+  +  +I  ++        P  +L
Sbjct: 55  LKPVDSAQTRLENRT-------RDHQLDKIIPQIRKLNIILEISKLM--SSKKRGPFVSL 105

Query: 72  QKKFKTLDLQGKALN---WVSKYPCCFDVHQRR------CRLTKRMMSLVDEELSLKDSL 122
           Q   +  +L G  +N   ++ KYP  F++          C++T++   L+DEE ++    
Sbjct: 106 QLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVREC 165

Query: 123 EPVFVRRLAKLLMMSFNKRLNVLKINEFKRNFGFPDDYLIRIVPKYPDLFRIVS------ 176
           E   V+R+ KLL++S +  L V  +   ++  G P+D+   I+ KY   FR+V       
Sbjct: 166 EVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLETLEL 225

Query: 177 -----ESGRRSSME----VELLH-WDPDFAVSAVEGLARKNGDGAEPGFSCLLPLSWVKS 226
                ES   + +E    VE    W   F  +    +    G   E GF        +K+
Sbjct: 226 VDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFR-----EELKN 280

Query: 227 WERFHKFESVPYVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKCSIVKLGHFRRE 286
           W+R      VPYV PY D + +  G +  EKR V ++HELLSLT+ K   + +L HFR++
Sbjct: 281 WQR------VPYVKPY-DRKEISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKD 333

Query: 287 FLLPDRLNVLLLKHPGIFYVSNKYKIYTVLLREAYVGSQLVEKDPLVVVKEKFGELM 343
             +   +  ++LKHPGIFYVS K    T+ LREAY    L+E +P+  V+ K  +L+
Sbjct: 334 LGIEVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLV 390


>AT5G45790.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr5:18572473-18573664 FORWARD
           LENGTH=354
          Length = 354

 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 140/279 (50%), Gaps = 34/279 (12%)

Query: 87  WVSKYPCCFDVHQRR------CRLTKRMMSLVDEELSLKDSLEPVFVRRLAKLLMMSFNK 140
           ++ KYP  F++          C++T++   L+DEE ++    E   V+R+ KLL++S + 
Sbjct: 39  FIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSKHG 98

Query: 141 RLNVLKINEFKRNFGFPDDYLIRIVPKYPDLFRIVS-----------ESGRRSSME---- 185
            L V  +   ++  G P+D+   I+ KY   FR+V            ES   + +E    
Sbjct: 99  VLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLETLELVDRDDESLCVAKVEEWRE 158

Query: 186 VELLH-WDPDFAVSAVEGLARKNGDGAEPGFSCLLPLSWVKSWERFHKFESVPYVSPYSD 244
           VE    W   F  +    +    G   E GF        +K+W+R      VPYV PY D
Sbjct: 159 VEYREKWLSKFETNYAFPIHLPTGFKIEKGFR-----EELKNWQR------VPYVKPY-D 206

Query: 245 PRGLVEGSKEMEKRNVGLVHELLSLTLWKKCSIVKLGHFRREFLLPDRLNVLLLKHPGIF 304
            + +  G +  EKR V ++HELLSLT+ K   + +L HFR++  +   +  ++LKHPGIF
Sbjct: 207 RKEISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPGIF 266

Query: 305 YVSNKYKIYTVLLREAYVGSQLVEKDPLVVVKEKFGELM 343
           YVS K    T+ LREAY    L+E +P+  V+ K  +L+
Sbjct: 267 YVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLV 305


>AT2G39120.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr2:16321794-16322957 FORWARD
           LENGTH=387
          Length = 387

 Score =  118 bits (296), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 147/312 (47%), Gaps = 27/312 (8%)

Query: 54  IKNIILRYPNNEIPIEALQKKFKTLDLQGKALNWVSKYPCCFD------VHQRRCRLTKR 107
           +KN I++ PN  IPI A+ KK +  D+  K  +++ K+P  F+       +    RLT  
Sbjct: 55  LKNCIVQEPNRCIPISAISKKTRQFDVSTKIAHFLRKFPSIFEEFVGPEYNLPWFRLTPE 114

Query: 108 MMSLVDEELSLKDSLEPVFVRRLAKLLMMSFNKRLNVLKINEFKRNFGFPDDYLIRIVPK 167
              L  +E  +  +       RL KL++MS +  L +  +   K   G PDDYL     +
Sbjct: 115 ATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYL-----Q 169

Query: 168 YPDL-----FRIVSESGRRSSMEVELLHWDPDFAVSAVEGLARKNGDGAE--------PG 214
           +PD+     FR V        + V+    D   +V     + ++ G+ +         P 
Sbjct: 170 FPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPS 229

Query: 215 FSCLLPLSWVKSWERFHKFESVPYVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKK 274
             C L +  ++ W    +F+ +PYVSPY D   L   S   EKR VG +HELL L +   
Sbjct: 230 KGCRLRVK-IEDW--LMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHS 286

Query: 275 CSIVKLGHFRREFLLPDRLNVLLLKHPGIFYVSNKYKIYTVLLREAYVGSQLVEKDPLVV 334
               KL   ++ F LP +++    +HP IFY+S K K  T +LRE Y     VE  P++ 
Sbjct: 287 AERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLG 346

Query: 335 VKEKFGELMQEG 346
           V++K+ +LM+  
Sbjct: 347 VRKKYIQLMKNS 358


>AT4G24320.1 | Symbols:  | Ubiquitin carboxyl-terminal hydrolase
           family protein | chr4:12602298-12603485 REVERSE
           LENGTH=395
          Length = 395

 Score =  108 bits (270), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 167/348 (47%), Gaps = 29/348 (8%)

Query: 24  RRTFCLWSSK--KDPDLETALSRNRRWVVNNQIKNIILRYPNNEIPIEALQKKFKTLDLQ 81
           RRTF     K   D  L+ A+ R +       +K+ I+  P+  +P+ +L      ++L 
Sbjct: 15  RRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLVNLH 74

Query: 82  GKALNWVSKYPCCFDV------HQRRCRLTKRMMSLVDEE--LSLKDSLEPVFVRRLAKL 133
             A  +  KYP  F        H    RLT + ++L  EE  + L      V V+RL K 
Sbjct: 75  ITAAAFFQKYPSVFTTFQPSPSHPLHVRLTPQALTLHKEEETIHLSPPQRNVTVQRLTKF 134

Query: 134 LMMSFNKRLNVLKINEFKRNFGFPDDYLIRIVPKYPDLFRIVSESGRRS---SMEVELLH 190
           LM++    L +  ++ F+ + G P DY+  ++  YP+ F +     R +   ++ + +  
Sbjct: 135 LMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTLALTISS 194

Query: 191 WDPDFAVSAVEGL-ARKNGDGAEPGFSCLLPLSWVKSWERFHK--------FESVPYVSP 241
              +  VS +E   A  +G   + G      +++ K +E  HK        ++++PY+SP
Sbjct: 195 RRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYE-LHKRVKNWVEQWQNLPYISP 253

Query: 242 YSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKC---SIVKLGHFRREFLLPDRLNVLLL 298
           Y +   L   S + EK  V ++HELL L + KK    +++ LG +        R    L+
Sbjct: 254 YENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEY---LGFGMRFKKALV 310

Query: 299 KHPGIFYVSNKYKIYTVLLREAYVGSQLVEKDPLVVVKEKFGELMQEG 346
            HPGIFY+S+K +  TV+LREAY    L+EK PL+ ++ ++  LM + 
Sbjct: 311 HHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKS 358