Miyakogusa Predicted Gene

Lj5g3v1949730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1949730.1 Non Chatacterized Hit- tr|C5Y570|C5Y570_SORBI
Putative uncharacterized protein Sb05g003910
OS=Sorghu,61.96,3e-18,DUF793,Protein BYPASS-related; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.56206.1
         (400 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G74450.1 | Symbols:  | Protein of unknown function (DUF793) |...   495   e-140
AT1G18740.1 | Symbols:  | Protein of unknown function (DUF793) |...   484   e-137
AT1G43630.1 | Symbols:  | Protein of unknown function (DUF793) |...   459   e-129
AT1G63930.1 | Symbols: ROH1 | from the Czech 'roh' meaning 'corn...   277   1e-74
AT4G11300.1 | Symbols:  | Protein of unknown function (DUF793) |...   233   2e-61
AT4G23530.1 | Symbols:  | Protein of unknown function (DUF793) |...   209   4e-54

>AT1G74450.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr1:27982737-27983930 FORWARD LENGTH=397
          Length = 397

 Score =  495 bits (1274), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 252/415 (60%), Positives = 320/415 (77%), Gaps = 33/415 (7%)

Query: 1   MPATDYQGSSPSSSLTQFGRSIFSTNRRDQVHSMEGGST------LEHELESFQQHVTDR 54
           MPAT+YQ S        FGRS  +  R   V+S+E  +       +E EL SFQ+ V +R
Sbjct: 1   MPATEYQRS--------FGRSFLNLRRDTAVNSVESTTVTPELTQMEAELVSFQRKVAER 52

Query: 55  FLDLSSAGPDDLLSLSWVGKLLDHFLSCQEEFKAILNAHKAQALRPPLDRMVADYFERSV 114
           F+DL+++  +DLLSL WVGKLLD FLSCQEEF++I+  H++   +PP+DR+V+DYFERSV
Sbjct: 53  FIDLNASSCEDLLSLEWVGKLLDSFLSCQEEFRSIVINHRSMITKPPMDRLVSDYFERSV 112

Query: 115 KALDVCNAIRDGIEQIRQWQKLLEIVLFALGGN------QRSIGEGQFRRAKKALIDLAI 168
           KALDVCNAIRDG+EQIRQWQKL+EIV+ A   N      +R +GEGQFRRA+K LI+LAI
Sbjct: 113 KALDVCNAIRDGVEQIRQWQKLIEIVICAFNNNGGGSSGKRPLGEGQFRRARKTLIELAI 172

Query: 169 GMLDDKDSNASV---SHRNRSFGKSRDXXXXXXXXXXXXXXRSLGHFRSLSWSVSRTWSA 225
           GMLD+KDS++S     HRNRSFG++++              R++GHFRSLSWSVSR+WSA
Sbjct: 173 GMLDEKDSSSSSVSSQHRNRSFGRNKEQLHH----------RTIGHFRSLSWSVSRSWSA 222

Query: 226 ARQLQAIGNNTYPPRASDLVASHGLAMPVFIMNSILLFVMWALVAAIPCQDRGLHAHFTI 285
           ++QLQAIGNN   PRASD+ A++GL +PV+ M ++LLFVMWALVAAIPCQDRGL  HF +
Sbjct: 223 SKQLQAIGNNLATPRASDITATNGLIVPVYTMTTVLLFVMWALVAAIPCQDRGLQVHFNV 282

Query: 286 PRNYTWAVPLLSLHERIFEESKKRERKNACGLLKEIYQIEKCARAMNELADSVQFPLTEE 345
           PRNY W   L+SLH+RI EESKKRERKN CGLLKEI+Q EK +R MNEL DSVQFPL+EE
Sbjct: 283 PRNYQWGGSLMSLHDRIIEESKKRERKNTCGLLKEIHQFEKTSRLMNELVDSVQFPLSEE 342

Query: 346 REGEVRKRVQEVSQVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSLGRPNNAE 400
           +E EVR+RV+E+ ++ +ALK+GLDP ER+VREVFHRIVRSRTEGLD++G+ + +E
Sbjct: 343 KEMEVRERVEELGKLQEALKNGLDPFERKVREVFHRIVRSRTEGLDTVGKHHGSE 397


>AT1G18740.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr1:6464125-6465273 FORWARD LENGTH=382
          Length = 382

 Score =  484 bits (1246), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 246/404 (60%), Positives = 312/404 (77%), Gaps = 33/404 (8%)

Query: 1   MPATDYQGSSPSSSLTQFGRSIFSTNRRDQVHSMEGG---------STLEHELESFQQHV 51
           MPATD+QGS        FGRS+ S  RRDQV S             ST+E EL+SFQ+ V
Sbjct: 1   MPATDFQGS--------FGRSLLSL-RRDQVDSSTVVSGSSSHHEPSTMEVELDSFQRQV 51

Query: 52  TDRFLDLSSAGPDDLLSLSWVGKLLDHFLSCQEEFKAILNAHKAQALRPPLDRMVADYFE 111
            ++F+DL+ A  +DLLSL W+GKLLD FL CQEEF+AI+  H++Q  + P+DR+++DYFE
Sbjct: 52  AEKFIDLN-ASSNDLLSLEWIGKLLDSFLCCQEEFRAIVFNHRSQISKSPMDRLISDYFE 110

Query: 112 RSVKALDVCNAIRDGIEQIRQWQKLLEIVLFALGGNQRSIGEGQFRRAKKALIDLAIGML 171
           RS+KALDVCNAIRDGIEQIRQW+KL +IV+ AL  + R IGEGQ RRAKKALIDLAIGML
Sbjct: 111 RSIKALDVCNAIRDGIEQIRQWEKLADIVISALDSH-RPIGEGQLRRAKKALIDLAIGML 169

Query: 172 DDKD--SNASVSHRNRSFGKSRDXXXXXXXXXXXXXXRSLGHFRSLSWSVSRTWSAARQL 229
           D+KD  S  +++HRNRSFG+ +D              RS+GHFRSLSWSVSR+WSA++QL
Sbjct: 170 DEKDHPSGTNLAHRNRSFGRVKDSHH-----------RSIGHFRSLSWSVSRSWSASKQL 218

Query: 230 QAIGNNTYPPRASDLVASHGLAMPVFIMNSILLFVMWALVAAIPCQDRGLHAHFTIPRNY 289
           QA+ +N   PR +D+VAS+GLA+PV+ M S+LLFVMW LVAAIPCQDRGL  +F +PR++
Sbjct: 219 QALASNLATPRPNDVVASNGLAVPVYTMTSVLLFVMWVLVAAIPCQDRGLQVNFFVPRHF 278

Query: 290 TWAVPLLSLHERIFEESKKRERKNACGLLKEIYQIEKCARAMNELADSVQFPLTEEREGE 349
            WA P++SLH++I EESK+R+RKN CGLLKEI +IEK +R MNEL DS+ FPL +++E E
Sbjct: 279 QWAAPVMSLHDKIVEESKRRDRKNCCGLLKEIDRIEKSSRLMNELIDSIHFPLNDDKEVE 338

Query: 350 VRKRVQEVSQVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSL 393
           V++RV E+ QV +AL++GLDP ER+VREVFHRIVRSRTE LDSL
Sbjct: 339 VKQRVDELVQVREALRNGLDPFERKVREVFHRIVRSRTESLDSL 382


>AT1G43630.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr1:16436445-16437686 REVERSE LENGTH=413
          Length = 413

 Score =  459 bits (1180), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 235/408 (57%), Positives = 305/408 (74%), Gaps = 33/408 (8%)

Query: 1   MPATDYQGSSPSSSLTQFGRSIFSTNRRDQVHSMEGGS-----TLEHELESFQQHVTDRF 55
           MP T+Y           FGRS  S  RRDQ H M+  S     T+E EL+SFQ+ V ++F
Sbjct: 31  MPETEYS----------FGRSFLSL-RRDQAHLMDPTSFSEPMTMEVELDSFQRQVAEKF 79

Query: 56  LDL-SSAGPDDLLSLSWVGKLLDHFLSCQEEFKAILNAHKAQALRPPLDRMVADYFERSV 114
           +DL +SA   ++LSL W+GKLLD FL CQE+F+ I+  HK Q L+ P+DR++ +YFERSV
Sbjct: 80  IDLNASADEAEILSLEWIGKLLDSFLCCQEDFRVIIFNHKPQLLKQPMDRLIEEYFERSV 139

Query: 115 KALDVCNAIRDGIEQIRQWQKLLEIVLFALGGNQRSIGEGQFRRAKKALIDLAIGMLDDK 174
           KALDVCNAIRDGIEQIRQWQKL+EIV+ AL  NQR +GEG+  RAKKALIDLAIGMLD+K
Sbjct: 140 KALDVCNAIRDGIEQIRQWQKLIEIVISALDTNQRQLGEGEIHRAKKALIDLAIGMLDEK 199

Query: 175 DSNASVSHRNRSFGKSRDXXXXXXXXXXXXXXRSLGHFRSLSWSVSRTWSAARQLQAIGN 234
           DS  S +HRNRSF +++D              + +G+ RSLSWSVSR+WSA+RQLQ IGN
Sbjct: 200 DS--SNTHRNRSFTRNKD------------HNQHIGYIRSLSWSVSRSWSASRQLQGIGN 245

Query: 235 NTYPPRASDLVASHGLAMPVFIMNSILLFVMWALVAAIPCQDRGLHAHFTIPRNYTWAVP 294
           N   PRASD++A++GLA+ V+ M SILLFV W LVAAIPCQDRGLH HF  PR++ WAVP
Sbjct: 246 NLATPRASDVMATNGLALTVYTMTSILLFVTWVLVAAIPCQDRGLHVHFYFPRHFQWAVP 305

Query: 295 LLSLHERIFEES-KKRERKNACGLLKEIYQIEKCARAMNELADSVQFPLTEER-EGEVRK 352
           ++SLH++I +ES K+ ++K  CGLL+EI QIE+ +R +++L DS  F LT+E+   EV++
Sbjct: 306 VMSLHDKIMDESKKRDKKKKGCGLLREINQIERNSRMLSDLIDSDNFSLTDEKCTLEVKE 365

Query: 353 RVQEVSQVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSLGRPNNAE 400
           RVQE+  VC+A+K+GLDP +R+VR+VFH+IVR+RTE LDSLG+  N E
Sbjct: 366 RVQELMNVCEAIKEGLDPFDRKVRDVFHQIVRTRTEALDSLGKLQNQE 413


>AT1G63930.1 | Symbols: ROH1 | from the Czech 'roh' meaning 'corner'
           | chr1:23727927-23729174 FORWARD LENGTH=415
          Length = 415

 Score =  277 bits (708), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 154/423 (36%), Positives = 247/423 (58%), Gaps = 52/423 (12%)

Query: 2   PATDYQGSSPSSSLTQFGRSIFSTNRRDQVHSMEGGSTLEHELESFQQHVTDRFLDL--- 58
           PA D QGS         GR     N+   V++ +     + +LE FQ+H+ DRF +L   
Sbjct: 3   PAQDNQGSF-------LGRISIRRNQFVDVNNEQE----QEDLELFQKHIADRFTELLSP 51

Query: 59  -------------SSAGPDDLLSLSWVGKLLDHFLSCQEEFKAIL--NAHKAQALRPPLD 103
                        S A  + ++S++W+ KL+D FL C+ EFKAIL       Q  +PP D
Sbjct: 52  PQPPPSDEINTVASVAATEQIMSVTWLRKLMDVFLCCEAEFKAILLMGRDPTQISKPPFD 111

Query: 104 RMVADYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVLFALGGNQRSIGEGQFRRAKKAL 163
           R+V +  +RS+KALD+C A+ +GI+ +R +Q+L EI + AL   QR +G+G  RRAK+AL
Sbjct: 112 RLVPEMLDRSIKALDICTAVVNGIDSVRHYQRLAEIAVTAL--EQRPLGDGNVRRAKRAL 169

Query: 164 IDLAIGM-LDDKDSNA----------SVSHRNRSFGKSRDXXXXXXXXXXXXXXRSLGHF 212
            +L + + L+DK++ +            + R+ SFG+                  ++G  
Sbjct: 170 ANLVVALSLEDKENVSGGGGGGGGGNKTTERSWSFGRRSGGSSAASKGGA-----TIGQL 224

Query: 213 RSLSWSVSRTWSAARQLQAIGNNTYPPRASDLVASHGLAMPVFIMNSILLFVMWALVAAI 272
           +S SW+V R WSAA+Q+ A+  N  PPR ++   + GL  P+FIM+++++FVMW L AA+
Sbjct: 225 KSSSWAVGRNWSAAKQIHAMTANLTPPRGNE---AAGLPQPMFIMSTVMVFVMWVLTAAV 281

Query: 273 PCQDR-GLHAHFTIP-RNYTWAVPLLSLHERIFEESKKRERKNACGLLKEIYQIEKCARA 330
           PCQ+R GL  H  +P ++  WA  L+ +HE+I +E KK+E+K + GL++E+ ++EK   +
Sbjct: 282 PCQERSGLANHLPVPPKHLNWAQSLIGIHEKIGDEWKKKEKKGSAGLMEEMTRMEKLGHS 341

Query: 331 MNELADSVQFPLTEEREGEVRKRVQEVSQVCDALKDGLDPLERQVREVFHRIVRSRTEGL 390
           + E AD   +P  ++       +V E++++C  +++ L PL++Q+REVFHRIVRSR E L
Sbjct: 342 LMEFADGFHYPAEKDAAESAAVQVAEMAEICRRMEEELVPLQQQIREVFHRIVRSRAEIL 401

Query: 391 DSL 393
           + L
Sbjct: 402 EVL 404


>AT4G11300.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr4:6872345-6873460 REVERSE LENGTH=371
          Length = 371

 Score =  233 bits (595), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/398 (36%), Positives = 227/398 (57%), Gaps = 37/398 (9%)

Query: 2   PATDYQGSSPSSSLTQFGRSIFSTNRRDQVHSMEGGSTLEHE-LESFQQHVTDRFLDL-- 58
           PAT++Q    SS L++        +RR+QV SME     E E LE FQ+HV +RF +L  
Sbjct: 3   PATEHQ----SSFLSRL-------SRRNQVVSMEVNHEQEQEELEDFQKHVAERFAELLP 51

Query: 59  SSAGPDD--LLSLSWVGKLLDHFLSCQEEFKAILNAHKAQALRPPLDRMVADYFERSVKA 116
            S  P+   +LS+ W+ KLLD F+S + EF ++L ++ +Q  +PPLD++V +  +R VKA
Sbjct: 52  PSDSPESYPILSIQWLRKLLDVFMSIESEFHSVLTSNPSQISKPPLDKLVPEMLDRIVKA 111

Query: 117 LDVCNAIRDGIEQIRQWQKLLEIVLFALGGNQRSIGEGQFRRAKKALIDLAIGMLDDKDS 176
           LD+C A+ +G++ +RQ Q+  EI + AL   Q  + +G  RRAK+AL  L   +  + D 
Sbjct: 112 LDICTAVVNGVDSVRQIQRCAEIAVTAL--KQTPLSDGSVRRAKRALTSLLAAL--NADK 167

Query: 177 NASVSHRNRSFGKSRDXXXXXXXXXXXXXXRSLGHFRSLSWSVSRTWSAARQLQAIGNNT 236
           N+  S        S D                 G        VS+ WSAA+Q+QA+  N 
Sbjct: 168 NSGSSGGGSGRRSSTDQWSSFGRRSGGSSGGGGGGAG----CVSKNWSAAKQIQAMTANL 223

Query: 237 YPPRASDLVASHGLAMPVFIMNSILLFVMWALVAAIPCQ-DRGLHAHFTIPRNYTWAVPL 295
             PR        G A P++IM+S+++ VMW LV A+PCQ   GL  H  +P+N  WA   
Sbjct: 224 VAPRG-------GEASPMYIMSSVMVMVMWTLVVAVPCQTSNGLMVHVPLPKNQVWANAA 276

Query: 296 LSLHERIFEESKKRERKNACGLLKEIYQIEKCARAMNELADSVQFPLTEEREGEVRKRVQ 355
           +S+ ER+ EE K++E +   GL++E+ ++E+    + E ++  +F      E +V   V 
Sbjct: 277 VSISERVGEEMKRKETRGG-GLMEEMQRMERIGLKLMEFSEGFRF----NGEEDVVAEVA 331

Query: 356 EVSQVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSL 393
           E+ ++C  ++DGL+ L+R+VREVFHR+V+SR+E L+ +
Sbjct: 332 EMEEICRKMEDGLEGLQRRVREVFHRLVKSRSEILEVI 369


>AT4G23530.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr4:12279171-12280361 FORWARD LENGTH=396
          Length = 396

 Score =  209 bits (531), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 150/403 (37%), Positives = 235/403 (58%), Gaps = 52/403 (12%)

Query: 16  TQFGRSIFS--TNRRDQVHSMEGGSTLE-HELESFQQHVTDRFLDLSSAGP--------- 63
           T+F  S  S  + RR+Q+ SM+     E  ELE FQ+HV +RF DL ++           
Sbjct: 5   TEFQGSFLSRISIRRNQIVSMDVNHEQELEELEYFQKHVAERFSDLITSPSPPPSSSSSA 64

Query: 64  -----DDLLSLSWVGKLLDHFLSCQEEFKAILNAHKAQALRPPLDRMVADYFERSVKALD 118
                D +LS+ W+  LLD F+SC+ EFKA+L+  +     P L+R++ +  +R +KALD
Sbjct: 65  VSQPSDPILSIPWLQNLLDVFMSCEAEFKAVLSTTQISK-SPSLERVLPEMLDRILKALD 123

Query: 119 VCNAIRDGIEQIRQWQKLLEIVLFALGGNQRSIGEGQFRRAKKALIDLAIGMLDD--KDS 176
           +CNA+ +GI+ +RQ ++  EI + AL   QR + +G  RRAK+AL  L IG+  D  +D 
Sbjct: 124 LCNAVVNGIDSVRQSRRFAEIAVTAL--KQRPLCDGSVRRAKRALTSLLIGLNADERRDR 181

Query: 177 NAS---------VSHRNRSFGKSRDXXXXXXXXXXXXXXRSLGHFRSLSWSVSRTWSAAR 227
           N+           + R+ SFG   +                 G +  +   VS+ WSA++
Sbjct: 182 NSGGSGCSNQRRTTSRSWSFGTRSNVTGG-------------GLYGQV---VSKNWSASK 225

Query: 228 QLQAIGNNTYPPRASDLVASHGLAMPVFIMNSILLFVMWALVAAIPCQDRG-LHAHFTIP 286
           Q+QA+  N   PR ++   + G AMPV+IM+S+++ VMW LVAA+PCQ    L A   +P
Sbjct: 226 QIQAMVANLVLPRGAE---ASGPAMPVYIMSSVMVLVMWVLVAAVPCQTSSVLVAPLPLP 282

Query: 287 RNYTWAVPLLSLHERIFEESKKRERK-NACGLLKEIYQIEKCARAMNELADSVQFPLTEE 345
           ++  WA   +S+ ERI EE K++E++    GL++E+ ++EK   ++ E A+  +FP  EE
Sbjct: 283 KHQNWASAAMSIQERIGEEIKRKEKRCGGGGLMEEMQRMEKIGLSLMEFAERFRFPADEE 342

Query: 346 REGEVRKRVQEVSQVCDALKDGLDPLERQVREVFHRIVRSRTE 388
            E EV ++V E+ ++C  ++ GL+ L+RQVR+VFHR+VRSR E
Sbjct: 343 EEVEVAEKVDEMEEICRRMEVGLEDLQRQVRQVFHRLVRSRIE 385