Miyakogusa Predicted Gene

Lj5g3v1949720.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1949720.1 Non Chatacterized Hit- tr|F6GY40|F6GY40_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,46.09,2e-18,seg,NULL; HSP20,Alpha crystallin/Hsp20 domain;
HEAT-SHOCK PROTEIN 17,NULL; SMALL HEAT-SHOCK PROTEIN ,gene.g62595.t1.1
         (210 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76770.1 | Symbols:  | HSP20-like chaperones superfamily prot...   121   3e-28
AT1G76780.1 | Symbols:  | HSP20-like chaperones superfamily prot...    58   4e-09
AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily prot...    52   4e-07
AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily prot...    51   6e-07

>AT1G76770.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:28813569-28814378 FORWARD LENGTH=244
          Length = 244

 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/136 (47%), Positives = 91/136 (66%), Gaps = 5/136 (3%)

Query: 1   MEVELGLKXXXXXXXXXXXXXFQFAKDRAGPLFLSKETDAMFTLTAHLKGYKKDNIDISI 60
           ME+ELGLK             F+ A+D  G   LS+ET+++F L  HLKG+KKD IDI I
Sbjct: 1   MELELGLKITRTKDDVSSSTDFRVARDSFGHRSLSRETNSVFFLILHLKGFKKDGIDIEI 60

Query: 61  SVDGTEISVSGEKEVQEM---QMIPFKKELKIKGFRKKFKIPDGVVLDRIKAKYDEEDAA 117
           + +G  I +SG K+V+EM   + + +KKE +IK F+K F+IPD V+LD+IKA+++EED  
Sbjct: 61  NKEGNLIKISGRKQVEEMVLVKWVEWKKETEIKEFKKVFRIPDIVILDKIKARFNEEDGT 120

Query: 118 LTIVMPKMEMAKGISG 133
           LT+ MPK    KGI+G
Sbjct: 121 LTVTMPK--KVKGITG 134


>AT1G76780.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:28816641-28822256 FORWARD LENGTH=1871
          Length = 1871

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 40/53 (75%), Gaps = 2/53 (3%)

Query: 81  IPFKKELKIKGFRKKFKIPDGVVLDRIKAKYDEEDAALTIVMPKMEMAKGISG 133
           + ++KE++   F+K F+IPD V LD+IKA++D++DA LTI MPK    KGISG
Sbjct: 7   MAWRKEVEFSVFKKVFRIPDTVDLDKIKARFDDDDATLTITMPK--RVKGISG 57


>AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:22031474-22031941 FORWARD LENGTH=155
          Length = 155

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)

Query: 36  KETDAMFTLTAHLKGYKKDNIDISISVDGTEISVSGEKEVQ--EMQMIPFKKELKIKGFR 93
           KET       A L G KK+ + + I  D + + +SGE+ V+  E Q    + E    GF 
Sbjct: 51  KETAEAHVFKADLPGMKKEEVKVEIE-DDSVLKISGERHVEKEEKQDTWHRVERSSGGFS 109

Query: 94  KKFKIPDGVVLDRIKAKYDEEDAALTIVMPKMEMAK 129
           +KF++P+ V +D++KA    E+  LT+ +PK+E  K
Sbjct: 110 RKFRLPENVKMDQVKASM--ENGVLTVTVPKVETNK 143


>AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:2275148-2275621 FORWARD LENGTH=157
          Length = 157

 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)

Query: 36  KETDAMFTLTAHLKGYKKDNIDISISVDGTEISVSGEKEVQ--EMQMIPFKKELKIKGFR 93
           KET       A L G KK+ + + I  D + + +SGE+ V+  E Q    + E     F 
Sbjct: 53  KETAEAHVFKADLPGMKKEEVKVEIE-DDSVLKISGERHVEKEEKQDTWHRVERSSGQFS 111

Query: 94  KKFKIPDGVVLDRIKAKYDEEDAALTIVMPKMEMAK 129
           +KFK+P+ V +D++KA    E+  LT+ +PK+E AK
Sbjct: 112 RKFKLPENVKMDQVKASM--ENGVLTVTVPKVEEAK 145