Miyakogusa Predicted Gene
- Lj5g3v1949500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1949500.1 tr|F2DTP1|F2DTP1_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,32.85,5e-19,OS12G0152900
PROTEIN (FRAGMENT),NULL; CAMP-RESPONSE ELEMENT BINDING
PROTEIN-RELATED,NULL; basic regi,CUFF.56204.1
(242 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03970.1 | Symbols: GBF4 | G-box binding factor 4 | chr1:1018... 146 1e-35
AT5G44080.1 | Symbols: | Basic-leucine zipper (bZIP) transcript... 138 4e-33
AT1G49720.2 | Symbols: ABF1 | abscisic acid responsive element-b... 57 8e-09
AT3G19290.1 | Symbols: ABF4, AREB2 | ABRE binding factor 4 | chr... 57 1e-08
AT3G19290.3 | Symbols: ABF4 | ABRE binding factor 4 | chr3:66879... 57 1e-08
AT1G49720.1 | Symbols: ABF1 | abscisic acid responsive element-b... 57 1e-08
AT1G45249.1 | Symbols: ABF2, AREB1, ATAREB1 | abscisic acid resp... 56 2e-08
AT2G36270.1 | Symbols: ABI5, GIA1 | Basic-leucine zipper (bZIP) ... 55 3e-08
AT4G34000.3 | Symbols: ABF3, DPBF5 | abscisic acid responsive el... 54 1e-07
AT3G56850.1 | Symbols: AREB3, DPBF3 | ABA-responsive element bin... 54 1e-07
AT4G34000.2 | Symbols: ABF3, DPBF5 | abscisic acid responsive el... 54 1e-07
AT4G34000.1 | Symbols: ABF3, DPBF5 | abscisic acid responsive el... 54 1e-07
AT2G41070.2 | Symbols: EEL, ATBZIP12, DPBF4 | Basic-leucine zipp... 53 2e-07
AT2G41070.3 | Symbols: EEL, ATBZIP12, DPBF4 | Basic-leucine zipp... 53 2e-07
AT2G41070.1 | Symbols: EEL, ATBZIP12, DPBF4 | Basic-leucine zipp... 53 2e-07
AT1G45249.3 | Symbols: ABF2 | abscisic acid responsive elements-... 47 8e-06
>AT1G03970.1 | Symbols: GBF4 | G-box binding factor 4 |
chr1:1018237-1019049 FORWARD LENGTH=270
Length = 270
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 119/203 (58%), Gaps = 27/203 (13%)
Query: 50 RTVDDVWQEIIAGDHHQC--KEEIPDEMMTLEDFLVXXXXXXXXXXXXXXXMSMPLTERL 107
++VDDVW+EI++G+ KEE P+++MTLEDFL + +P TERL
Sbjct: 85 KSVDDVWKEIVSGEQKTIMMKEEEPEDIMTLEDFLAKAEMDEGASDEID--VKIP-TERL 141
Query: 108 S--GVFSLD-----GSSFQXXXXXXXXXXXXXXXXXXXXXXXXTRGKRGRPVVENLDKAA 160
+ G ++ D SSFQ TRGKRGR ++E +DKAA
Sbjct: 142 NNDGSYTFDFPMQRHSSFQMVEGSMGGGV--------------TRGKRGRVMMEAMDKAA 187
Query: 161 QQRQRRMIKNRESAARSRERKQAYQVELESLAVXXXXXXXXXXXXXAERTKERFKQLMEE 220
QRQ+RMIKNRESAARSRERKQAYQVELE+LA E TKER+K+LME
Sbjct: 188 AQRQKRMIKNRESAARSRERKQAYQVELETLAAKLEEENEQLLKEIEESTKERYKKLMEV 247
Query: 221 VIPVVEKRRPP-RPLRRINSMQW 242
+IPV EK RPP RPL R +S++W
Sbjct: 248 LIPVDEKPRPPSRPLSRSHSLEW 270
>AT5G44080.1 | Symbols: | Basic-leucine zipper (bZIP) transcription
factor family protein | chr5:17738787-17739734 REVERSE
LENGTH=315
Length = 315
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 121/222 (54%), Gaps = 18/222 (8%)
Query: 31 TTTNFIDHADSTLTDPYVPRTVDDVWQEIIAGDHHQCKEEIPDEMMTLEDFLVXXXXXXX 90
T ++ +DH T T ++VD++W+E+++G+ KEE +E+MTLEDFL
Sbjct: 102 TASDVVDHGGGTETTRGG-KSVDEIWREMVSGEGKGMKEETSEEIMTLEDFLAKAAVEDE 160
Query: 91 XXXXXXXX---MSMPLTERLSGVFSLDGSS-----FQXXXXXXXXXXXXXXXXXXXXXXX 142
+ +P+T + D S+ FQ
Sbjct: 161 TAVTASAEDLDVKIPVTN-----YGFDHSAPPHNPFQMIDKVEGSIVAFGNGLDVYGGG- 214
Query: 143 XTRGKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVXXXXXXXXX 202
RGKR R +VE LDKAA QRQRRMIKNRESAARSRERKQAYQVELE+LA
Sbjct: 215 -ARGKRARVMVEPLDKAAAQRQRRMIKNRESAARSRERKQAYQVELEALAAKLEEENELL 273
Query: 203 XXXXAERTKERFKQLMEEVIPVVE--KRRPPRPLRRINSMQW 242
++ KER+++LME VIPVVE K++PPR LRRI S++W
Sbjct: 274 SKEIEDKRKERYQKLMEFVIPVVEKPKQQPPRFLRRIRSLEW 315
>AT1G49720.2 | Symbols: ABF1 | abscisic acid responsive
element-binding factor 1 | chr1:18400826-18402362
FORWARD LENGTH=403
Length = 403
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 148 RGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
RGR L+K ++RQ+RMIKNRESAARSR RKQAY +ELE+
Sbjct: 299 RGRRSNTGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEA 341
>AT3G19290.1 | Symbols: ABF4, AREB2 | ABRE binding factor 4 |
chr3:6687956-6689784 FORWARD LENGTH=431
Length = 431
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 148 RGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
RGR L+K ++RQRRMIKNRESAARSR RKQAY +ELE+
Sbjct: 339 RGRRSNTGLEKVIERRQRRMIKNRESAARSRARKQAYTLELEA 381
>AT3G19290.3 | Symbols: ABF4 | ABRE binding factor 4 |
chr3:6687956-6689784 FORWARD LENGTH=432
Length = 432
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 148 RGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
RGR L+K ++RQRRMIKNRESAARSR RKQAY +ELE+
Sbjct: 339 RGRRSNTGLEKVIERRQRRMIKNRESAARSRARKQAYTLELEA 381
>AT1G49720.1 | Symbols: ABF1 | abscisic acid responsive
element-binding factor 1 | chr1:18400826-18402354
FORWARD LENGTH=392
Length = 392
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 148 RGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
RGR L+K ++RQ+RMIKNRESAARSR RKQAY +ELE+
Sbjct: 299 RGRRSNTGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEA 341
>AT1G45249.1 | Symbols: ABF2, AREB1, ATAREB1 | abscisic acid
responsive elements-binding factor 2 |
chr1:17165420-17167415 REVERSE LENGTH=416
Length = 416
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 146 GKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
G RGR ++K ++RQRRMIKNRESAARSR RKQAY VELE+
Sbjct: 323 GVRGRKS-GTVEKVVERRQRRMIKNRESAARSRARKQAYTVELEA 366
>AT2G36270.1 | Symbols: ABI5, GIA1 | Basic-leucine zipper (bZIP)
transcription factor family protein |
chr2:15204980-15206571 REVERSE LENGTH=442
Length = 442
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
Query: 146 GKRGRP-VVEN-LDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
G RGR VV+ ++K ++RQRRMIKNRESAARSR RKQAY VELE+
Sbjct: 339 GLRGRKRVVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEA 385
>AT4G34000.3 | Symbols: ABF3, DPBF5 | abscisic acid responsive
elements-binding factor 3 | chr4:16296008-16297594
FORWARD LENGTH=449
Length = 449
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 156 LDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
L+K ++RQ+RMIKNRESAARSR RKQAY +ELE+
Sbjct: 368 LEKVIERRQKRMIKNRESAARSRARKQAYTMELEA 402
>AT3G56850.1 | Symbols: AREB3, DPBF3 | ABA-responsive element
binding protein 3 | chr3:21046554-21047894 REVERSE
LENGTH=297
Length = 297
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 10/86 (11%)
Query: 154 ENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVXXXXXXXXXXXXXAERTKER 213
E ++K ++RQ+RMIKNRESAARSR RKQAY ELE E + R
Sbjct: 219 EVVEKTVERRQKRMIKNRESAARSRARKQAYTHELE----------IKVSRLEEENERLR 268
Query: 214 FKQLMEEVIPVVEKRRPPRPLRRINS 239
++ +E+++P V P R LRR +S
Sbjct: 269 KQKEVEKILPSVPPPDPKRQLRRTSS 294
>AT4G34000.2 | Symbols: ABF3, DPBF5 | abscisic acid responsive
elements-binding factor 3 | chr4:16296008-16297971
FORWARD LENGTH=454
Length = 454
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 156 LDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
L+K ++RQ+RMIKNRESAARSR RKQAY +ELE+
Sbjct: 368 LEKVIERRQKRMIKNRESAARSRARKQAYTMELEA 402
>AT4G34000.1 | Symbols: ABF3, DPBF5 | abscisic acid responsive
elements-binding factor 3 | chr4:16296008-16297971
FORWARD LENGTH=454
Length = 454
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 156 LDKAAQQRQRRMIKNRESAARSRERKQAYQVELES 190
L+K ++RQ+RMIKNRESAARSR RKQAY +ELE+
Sbjct: 368 LEKVIERRQKRMIKNRESAARSRARKQAYTMELEA 402
>AT2G41070.2 | Symbols: EEL, ATBZIP12, DPBF4 | Basic-leucine zipper
(bZIP) transcription factor family protein |
chr2:17131249-17132208 FORWARD LENGTH=262
Length = 262
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 148 RGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVXXXXXXXXXXXXXA 207
R R E ++K ++RQ+RMIKNRESAARSR RKQAY ELE
Sbjct: 178 RKRVAGEIVEKTVERRQKRMIKNRESAARSRARKQAYTHELE------------IKVSRL 225
Query: 208 ERTKERFKQLMEEVIPVVEKRRPPRP---LRRINS 239
E E+ ++L +EV ++ PP P LRR NS
Sbjct: 226 EEENEKLRRL-KEVEKILPSEPPPDPKWKLRRTNS 259
>AT2G41070.3 | Symbols: EEL, ATBZIP12, DPBF4 | Basic-leucine zipper
(bZIP) transcription factor family protein |
chr2:17131249-17132208 FORWARD LENGTH=262
Length = 262
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 148 RGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVXXXXXXXXXXXXXA 207
R R E ++K ++RQ+RMIKNRESAARSR RKQAY ELE
Sbjct: 178 RKRVAGEIVEKTVERRQKRMIKNRESAARSRARKQAYTHELE------------IKVSRL 225
Query: 208 ERTKERFKQLMEEVIPVVEKRRPPRP---LRRINS 239
E E+ ++L +EV ++ PP P LRR NS
Sbjct: 226 EEENEKLRRL-KEVEKILPSEPPPDPKWKLRRTNS 259
>AT2G41070.1 | Symbols: EEL, ATBZIP12, DPBF4 | Basic-leucine zipper
(bZIP) transcription factor family protein |
chr2:17131249-17132208 FORWARD LENGTH=262
Length = 262
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 148 RGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVXXXXXXXXXXXXXA 207
R R E ++K ++RQ+RMIKNRESAARSR RKQAY ELE
Sbjct: 178 RKRVAGEIVEKTVERRQKRMIKNRESAARSRARKQAYTHELE------------IKVSRL 225
Query: 208 ERTKERFKQLMEEVIPVVEKRRPPRP---LRRINS 239
E E+ ++L +EV ++ PP P LRR NS
Sbjct: 226 EEENEKLRRL-KEVEKILPSEPPPDPKWKLRRTNS 259
>AT1G45249.3 | Symbols: ABF2 | abscisic acid responsive
elements-binding factor 2 | chr1:17165420-17167415
REVERSE LENGTH=427
Length = 427
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 35/56 (62%), Gaps = 12/56 (21%)
Query: 146 GKRGRPVVENLDKAAQQRQRRMIKNRESAARSRERKQ-----------AYQVELES 190
G RGR ++K ++RQRRMIKNRESAARSR RKQ AY VELE+
Sbjct: 323 GVRGRKS-GTVEKVVERRQRRMIKNRESAARSRARKQIFTADQTIYWNAYTVELEA 377