Miyakogusa Predicted Gene

Lj5g3v1915180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1915180.1 Non Chatacterized Hit- tr|D3GDL2|D3GDL2_CAMSI
Putative one-helix protein OS=Camellia sinensis PE=2
S,100,0.000000000003, ,CUFF.56174.1
         (35 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G34000.1 | Symbols: OHP2 | one-helix protein 2 | chr1:1235815...    72   7e-14

>AT1G34000.1 | Symbols: OHP2 | one-helix protein 2 |
           chr1:12358151-12358902 REVERSE LENGTH=172
          Length = 172

 Score = 72.4 bits (176), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/35 (94%), Positives = 34/35 (97%)

Query: 1   MFGFAVGMLTEYATGSDFVDQVKILLSNFGIVDLE 35
           MFGFAVGMLTEYATGSD VDQVKILLSNFGI+DLE
Sbjct: 138 MFGFAVGMLTEYATGSDLVDQVKILLSNFGILDLE 172