Miyakogusa Predicted Gene

Lj5g3v1889490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1889490.1 Non Chatacterized Hit- tr|G7KHN4|G7KHN4_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,61.64,1e-18,seg,NULL,CUFF.56114.1
         (170 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G71780.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   202   1e-52

>AT1G71780.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endoplasmic
           reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED
           DURING: 15 growth stages; Has 34 Blast hits to 34
           proteins in 11 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:26995406-26996638 REVERSE LENGTH=197
          Length = 197

 Score =  202 bits (513), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 94/150 (62%), Positives = 122/150 (81%), Gaps = 1/150 (0%)

Query: 20  VEIHLFRQGRGPIAVFKSQLGGSERDRLEVRDILHHHFLKSIFAFNPQSGRAAPIRFNPK 79
           VEIHL++ G+GPI VFKS LGG E+D+LEVR IL  + LK+IFAFN + GRA PIRF+P+
Sbjct: 48  VEIHLYKCGKGPIDVFKSNLGGYEQDQLEVRSILEKYGLKAIFAFNVEKGRAVPIRFHPR 107

Query: 80  DGTSVLPYRHGAVLYIDAEPKDSLLKPVTRILVGVLLITIMIMLVWKDIPEWIKNFNVSG 139
           +G SVLPYR GAV+YID EP+DSLLKP+TRI++GV+++T++I  + KD P WIKN N+S 
Sbjct: 108 NGRSVLPYRDGAVIYIDGEPQDSLLKPITRIILGVVIVTLLITFLLKDPPAWIKN-NISI 166

Query: 140 VNFSPWIVACVVIVFTRMRKRTKGFLKNFG 169
             F PW++AC+VIVFTR RKRT+ F K +G
Sbjct: 167 GTFPPWVLACIVIVFTRARKRTRDFFKKYG 196