Miyakogusa Predicted Gene

Lj5g3v1889420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1889420.1 tr|A9RC27|A9RC27_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,42.48,3e-19,HSP20-like chaperones,HSP20-like chaperone;
CS,CS-like domain; CS,CS domain; no description,NULL; TE,CUFF.56191.1
         (191 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02450.2 | Symbols:  | HSP20-like chaperones superfamily prot...    97   9e-21
AT4G02450.1 | Symbols:  | HSP20-like chaperones superfamily prot...    97   9e-21
AT3G03773.1 | Symbols:  | HSP20-like chaperones superfamily prot...    87   9e-18
AT3G03773.2 | Symbols:  | HSP20-like chaperones superfamily prot...    84   8e-17

>AT4G02450.2 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr4:1073987-1075765 REVERSE LENGTH=240
          Length = 240

 Score = 96.7 bits (239), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 70/101 (69%), Gaps = 1/101 (0%)

Query: 1   MSRHPPVKWAQRSDELYITIELPDAQDVKLILEPEGKLYFSATAGPENIPYEFNFDLFDK 60
           MSRHP VKWA+ ++++++T+ L D +D K+ L+PEG   FSA  GPEN  YE   +L DK
Sbjct: 1   MSRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADK 60

Query: 61  VDVNNSESSVSKRNIIYLISKAESKCWDRLLKQGGKPPVFL 101
           V+V  S+ ++ +R+I  +I KAE + W++LL+   KPP ++
Sbjct: 61  VNVEESKINIGERSIFCIIEKAEPERWNKLLRV-KKPPHYV 100


>AT4G02450.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr4:1073987-1075765 REVERSE LENGTH=241
          Length = 241

 Score = 96.7 bits (239), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 70/101 (69%), Gaps = 1/101 (0%)

Query: 1   MSRHPPVKWAQRSDELYITIELPDAQDVKLILEPEGKLYFSATAGPENIPYEFNFDLFDK 60
           MSRHP VKWA+ ++++++T+ L D +D K+ L+PEG   FSA  GPEN  YE   +L DK
Sbjct: 1   MSRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADK 60

Query: 61  VDVNNSESSVSKRNIIYLISKAESKCWDRLLKQGGKPPVFL 101
           V+V  S+ ++ +R+I  +I KAE + W++LL+   KPP ++
Sbjct: 61  VNVEESKINIGERSIFCIIEKAEPERWNKLLRV-KKPPHYV 100


>AT3G03773.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr3:951885-953490 FORWARD LENGTH=150
          Length = 150

 Score = 86.7 bits (213), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 2/101 (1%)

Query: 1   MSRHPPVKWAQRSDELYITIELPDAQDVKLILEPEGKLYFSATAGPENIPYEFNFDLFDK 60
           MSR+P V WAQRSD++Y+T+ LPDA+D+ +  EP+G   FSA  G +   +EF+ +L+ K
Sbjct: 1   MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSAL-GAQGERFEFSLELYGK 59

Query: 61  VDVNNSESSVSKRNIIYLISKAESKCWDRLLKQGGKPPVFL 101
           + +     +V  RNII+ I K E   W RLLK   KP  ++
Sbjct: 60  I-MTEYRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYI 99


>AT3G03773.2 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr3:951628-953490 FORWARD LENGTH=204
          Length = 204

 Score = 83.6 bits (205), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 2/101 (1%)

Query: 1   MSRHPPVKWAQRSDELYITIELPDAQDVKLILEPEGKLYFSATAGPENIPYEFNFDLFDK 60
           M R+P V WAQRSD++Y+T+ LPDA+D+ +  EP+G   FSA  G +   +EF+ +L+ K
Sbjct: 55  MIRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSAL-GAQGERFEFSLELYGK 113

Query: 61  VDVNNSESSVSKRNIIYLISKAESKCWDRLLKQGGKPPVFL 101
           + +     +V  RNII+ I K E   W RLLK   KP  ++
Sbjct: 114 I-MTEYRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYI 153