Miyakogusa Predicted Gene

Lj5g3v1871860.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1871860.1 Non Chatacterized Hit- tr|K3YGL1|K3YGL1_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si013379,46.74,3e-19,Agenet,Agenet-like domain,CUFF.56245.1
         (121 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G55600.3 | Symbols:  | agenet domain-containing protein / bro...   145   5e-36
AT5G55600.2 | Symbols:  | agenet domain-containing protein / bro...   145   5e-36
AT5G55600.1 | Symbols:  | agenet domain-containing protein / bro...   145   5e-36
AT1G68580.2 | Symbols:  | agenet domain-containing protein / bro...    76   6e-15
AT1G68580.1 | Symbols:  | agenet domain-containing protein / bro...    75   7e-15

>AT5G55600.3 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr5:22522232-22524796 REVERSE LENGTH=663
          Length = 663

 Score =  145 bits (366), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 69/113 (61%), Positives = 83/113 (73%), Gaps = 1/113 (0%)

Query: 3   SLKQIEFQPWNNPTYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKFQYDDVQDEDGS 62
           S   ++  P  N   K D KIE LCQDSGIRGCWFRCTV+ V+RKQ+K QYDD++DEDG 
Sbjct: 367 SPTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFRCTVLDVSRKQVKLQYDDIEDEDGY 426

Query: 63  GNLQEWVPAFKFAKPDKLGMRHSDRPTIRLAPIH-EEQKLAIEVGTAVDAWWS 114
           GNL+EWVPAFK A PDKLG+R S+RPTIR AP   +     + +G AVDAWW+
Sbjct: 427 GNLEEWVPAFKSAMPDKLGIRLSNRPTIRPAPRDVKTAYFDLTIGEAVDAWWN 479


>AT5G55600.2 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr5:22522232-22524796 REVERSE LENGTH=663
          Length = 663

 Score =  145 bits (366), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 69/113 (61%), Positives = 83/113 (73%), Gaps = 1/113 (0%)

Query: 3   SLKQIEFQPWNNPTYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKFQYDDVQDEDGS 62
           S   ++  P  N   K D KIE LCQDSGIRGCWFRCTV+ V+RKQ+K QYDD++DEDG 
Sbjct: 367 SPTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFRCTVLDVSRKQVKLQYDDIEDEDGY 426

Query: 63  GNLQEWVPAFKFAKPDKLGMRHSDRPTIRLAPIH-EEQKLAIEVGTAVDAWWS 114
           GNL+EWVPAFK A PDKLG+R S+RPTIR AP   +     + +G AVDAWW+
Sbjct: 427 GNLEEWVPAFKSAMPDKLGIRLSNRPTIRPAPRDVKTAYFDLTIGEAVDAWWN 479


>AT5G55600.1 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr5:22522232-22524796 REVERSE LENGTH=663
          Length = 663

 Score =  145 bits (366), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 69/113 (61%), Positives = 83/113 (73%), Gaps = 1/113 (0%)

Query: 3   SLKQIEFQPWNNPTYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKFQYDDVQDEDGS 62
           S   ++  P  N   K D KIE LCQDSGIRGCWFRCTV+ V+RKQ+K QYDD++DEDG 
Sbjct: 367 SPTNVQKHPCYNGVVKTDAKIEFLCQDSGIRGCWFRCTVLDVSRKQVKLQYDDIEDEDGY 426

Query: 63  GNLQEWVPAFKFAKPDKLGMRHSDRPTIRLAPIH-EEQKLAIEVGTAVDAWWS 114
           GNL+EWVPAFK A PDKLG+R S+RPTIR AP   +     + +G AVDAWW+
Sbjct: 427 GNLEEWVPAFKSAMPDKLGIRLSNRPTIRPAPRDVKTAYFDLTIGEAVDAWWN 479


>AT1G68580.2 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr1:25752869-25755631 FORWARD LENGTH=648
          Length = 648

 Score = 75.9 bits (185), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 4/95 (4%)

Query: 23  IELLCQDSGIRGCWFRCTVVQVARKQLKFQYDDVQD-EDGSGNLQEWVPAFKFAKPDKLG 81
           IE+L +DSGIRGCWF+  V++  + ++K QY D+QD +D S  L+EW+   + A  D LG
Sbjct: 369 IEVLSEDSGIRGCWFKALVLKKHKDKVKVQYQDIQDADDESKKLEEWILTSRVAAGDHLG 428

Query: 82  -MRHSDRPTIR--LAPIHEEQKLAIEVGTAVDAWW 113
            +R   R  +R  L P  E     I VG  VD WW
Sbjct: 429 DLRIKGRKVVRPMLKPSKENDVCVIGVGMPVDVWW 463


>AT1G68580.1 | Symbols:  | agenet domain-containing protein /
           bromo-adjacent homology (BAH) domain-containing protein
           | chr1:25753582-25755059 FORWARD LENGTH=396
          Length = 396

 Score = 75.5 bits (184), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 4/95 (4%)

Query: 23  IELLCQDSGIRGCWFRCTVVQVARKQLKFQYDDVQD-EDGSGNLQEWVPAFKFAKPDKLG 81
           IE+L +DSGIRGCWF+  V++  + ++K QY D+QD +D S  L+EW+   + A  D LG
Sbjct: 273 IEVLSEDSGIRGCWFKALVLKKHKDKVKVQYQDIQDADDESKKLEEWILTSRVAAGDHLG 332

Query: 82  -MRHSDRPTIR--LAPIHEEQKLAIEVGTAVDAWW 113
            +R   R  +R  L P  E     I VG  VD WW
Sbjct: 333 DLRIKGRKVVRPMLKPSKENDVCVIGVGMPVDVWW 367