Miyakogusa Predicted Gene

Lj5g3v1865690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1865690.1 tr|I0YPV2|I0YPV2_9CHLO Protein CrcB homolog
OS=Coccomyxa subellipsoidea C-169 GN=crcB PE=3
SV=1,27.68,8e-18,CRCB,Camphor resistance CrcB protein; CrbC,Camphor
resistance CrcB protein,gene.g62474.t1.1
         (424 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41705.2 | Symbols:  | camphor resistance CrcB family protein...   420   e-117
AT2G41705.1 | Symbols:  | camphor resistance CrcB family protein...   420   e-117

>AT2G41705.2 | Symbols:  | camphor resistance CrcB family protein |
           chr2:17398083-17399910 FORWARD LENGTH=461
          Length = 461

 Score =  420 bits (1080), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/434 (56%), Positives = 296/434 (68%), Gaps = 27/434 (6%)

Query: 7   HHTDNNDDAESGSVSEAGDIGDQS--------NSFRLSFDNRSENGAVSTLIQDGNRLQP 58
           H  DN+ D+ES  VSEAGDIGD+S         S RLS D+  E G   T  Q+ + L  
Sbjct: 34  HLIDNDVDSES--VSEAGDIGDRSLRRRHSAGRSSRLSADDFIEQGTHDTSRQEQDILHD 91

Query: 59  -----NSSV---MPLQIELTSPLSTDAVLISE--EGAKDEHNGLPEWLDYISCMALLAVF 108
                 +SV   +P  I   SPL T ++L  E     K+E   LP+ L+YISC+  LAVF
Sbjct: 92  LRAFNTASVNKTLPEDIT-ASPLPTKSLLSPEINNSGKEEERVLPKSLEYISCLIHLAVF 150

Query: 109 GILGVLTRYLLQKLFGPGVANVTSDQTILYPDLPSNVVGSFLMGWFGVVFKGDISHVSEH 168
           GI G +TRYLLQKLFGP  A VTSD +ILY DLPSN+VGSFLMGWFGVVFK DI+ VSE 
Sbjct: 151 GIFGAITRYLLQKLFGPTGARVTSDGSILYLDLPSNMVGSFLMGWFGVVFKADIARVSEF 210

Query: 169 LAIAITTGYLGSLTTFSGWNQGMLQLSVSGHWVYSSLGFLIGFSLVVISIIFGTESAKGF 228
           +AI ++TGYLGSLTTFSGWNQ ML LS  G WVY+ LGFL+G  L   SII G E+AKGF
Sbjct: 211 VAIGLSTGYLGSLTTFSGWNQKMLDLSADGQWVYAVLGFLLGLFLTSYSIILGVETAKGF 270

Query: 229 RWLLNRLNMCSANGSSKIN-YKVDNYRRQLTLMLMSLVILAILWGVSGALVKAKFKHGGS 287
           +WLL+R     A+   K +  KV+ ++  +  + + L++L  L   S  L+  +F  G S
Sbjct: 271 KWLLHR----RASSEDKFHCLKVNTFQSHIVSLTLMLLLLVALLTASSILLVKEFDKGTS 326

Query: 288 AAQLWIACIVGPFGVWIRWFLARLNGRGLGKAGL-YKWVPFGTLIANVSAACVMAALACV 346
            AQLW  C+V   GVW+RWFLARLNGRGLGK     +WVPFGTLIANV AACVMAALA +
Sbjct: 327 EAQLWFGCLVAAPGVWLRWFLARLNGRGLGKDSQNLRWVPFGTLIANVVAACVMAALATL 386

Query: 347 KTAVNTRNCDTVVGGIQFGLMGCLSTVSTFVAEINAMRESRHPWRAYAYAAMTICVSFSL 406
           K +VNTR C+TV   IQFGL+GCLSTVSTF+AE NAMRES +PWRAYAYA+ TI VSF++
Sbjct: 387 KKSVNTRTCNTVASSIQFGLLGCLSTVSTFMAEFNAMRESDYPWRAYAYASFTIVVSFAI 446

Query: 407 GILIYCIPYWTKGF 420
           G +IY +P W  GF
Sbjct: 447 GTIIYSVPVWVIGF 460


>AT2G41705.1 | Symbols:  | camphor resistance CrcB family protein |
           chr2:17398083-17399910 FORWARD LENGTH=461
          Length = 461

 Score =  420 bits (1080), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/434 (56%), Positives = 296/434 (68%), Gaps = 27/434 (6%)

Query: 7   HHTDNNDDAESGSVSEAGDIGDQS--------NSFRLSFDNRSENGAVSTLIQDGNRLQP 58
           H  DN+ D+ES  VSEAGDIGD+S         S RLS D+  E G   T  Q+ + L  
Sbjct: 34  HLIDNDVDSES--VSEAGDIGDRSLRRRHSAGRSSRLSADDFIEQGTHDTSRQEQDILHD 91

Query: 59  -----NSSV---MPLQIELTSPLSTDAVLISE--EGAKDEHNGLPEWLDYISCMALLAVF 108
                 +SV   +P  I   SPL T ++L  E     K+E   LP+ L+YISC+  LAVF
Sbjct: 92  LRAFNTASVNKTLPEDIT-ASPLPTKSLLSPEINNSGKEEERVLPKSLEYISCLIHLAVF 150

Query: 109 GILGVLTRYLLQKLFGPGVANVTSDQTILYPDLPSNVVGSFLMGWFGVVFKGDISHVSEH 168
           GI G +TRYLLQKLFGP  A VTSD +ILY DLPSN+VGSFLMGWFGVVFK DI+ VSE 
Sbjct: 151 GIFGAITRYLLQKLFGPTGARVTSDGSILYLDLPSNMVGSFLMGWFGVVFKADIARVSEF 210

Query: 169 LAIAITTGYLGSLTTFSGWNQGMLQLSVSGHWVYSSLGFLIGFSLVVISIIFGTESAKGF 228
           +AI ++TGYLGSLTTFSGWNQ ML LS  G WVY+ LGFL+G  L   SII G E+AKGF
Sbjct: 211 VAIGLSTGYLGSLTTFSGWNQKMLDLSADGQWVYAVLGFLLGLFLTSYSIILGVETAKGF 270

Query: 229 RWLLNRLNMCSANGSSKIN-YKVDNYRRQLTLMLMSLVILAILWGVSGALVKAKFKHGGS 287
           +WLL+R     A+   K +  KV+ ++  +  + + L++L  L   S  L+  +F  G S
Sbjct: 271 KWLLHR----RASSEDKFHCLKVNTFQSHIVSLTLMLLLLVALLTASSILLVKEFDKGTS 326

Query: 288 AAQLWIACIVGPFGVWIRWFLARLNGRGLGKAGL-YKWVPFGTLIANVSAACVMAALACV 346
            AQLW  C+V   GVW+RWFLARLNGRGLGK     +WVPFGTLIANV AACVMAALA +
Sbjct: 327 EAQLWFGCLVAAPGVWLRWFLARLNGRGLGKDSQNLRWVPFGTLIANVVAACVMAALATL 386

Query: 347 KTAVNTRNCDTVVGGIQFGLMGCLSTVSTFVAEINAMRESRHPWRAYAYAAMTICVSFSL 406
           K +VNTR C+TV   IQFGL+GCLSTVSTF+AE NAMRES +PWRAYAYA+ TI VSF++
Sbjct: 387 KKSVNTRTCNTVASSIQFGLLGCLSTVSTFMAEFNAMRESDYPWRAYAYASFTIVVSFAI 446

Query: 407 GILIYCIPYWTKGF 420
           G +IY +P W  GF
Sbjct: 447 GTIIYSVPVWVIGF 460