Miyakogusa Predicted Gene

Lj5g3v1853490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1853490.1 CUFF.56072.1
         (575 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G65280.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...   537   e-153
AT5G22080.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...    67   3e-11
AT5G22080.2 | Symbols:  | Chaperone DnaJ-domain superfamily prot...    67   3e-11
AT3G57340.2 | Symbols:  | Heat shock protein DnaJ, N-terminal wi...    55   1e-07
AT3G57340.1 | Symbols:  | Heat shock protein DnaJ, N-terminal wi...    55   1e-07
AT4G39150.2 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    54   3e-07
AT4G39150.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    54   3e-07
AT5G05750.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    54   3e-07
AT5G49060.1 | Symbols:  | Heat shock protein DnaJ, N-terminal wi...    53   5e-07
AT3G06778.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...    51   2e-06
AT1G61770.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...    51   3e-06
AT1G21080.3 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    51   3e-06
AT1G21080.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    50   3e-06
AT1G24120.1 | Symbols: ARL1 | ARG1-like 1 | chr1:8529283-8531946...    50   6e-06
AT3G08970.1 | Symbols: ATERDJ3A, TMS1 | DNAJ heat shock N-termin...    49   8e-06
AT2G21510.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    49   9e-06

>AT1G65280.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:24245501-24248521
           FORWARD LENGTH=588
          Length = 588

 Score =  537 bits (1383), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 289/485 (59%), Positives = 350/485 (72%), Gaps = 16/485 (3%)

Query: 100 PLSVVRELMTEFPNVGNDLKQLLQMIDDGQAVDIKGISERSLMKHLKKLFLSLNLKENGD 159
           P +VV+E++ EFPNVGNDLKQLL+MIDDGQAVDIKGISE +L K LKKLFLSL LKE GD
Sbjct: 111 PETVVKEMLLEFPNVGNDLKQLLKMIDDGQAVDIKGISESTLKKRLKKLFLSLKLKERGD 170

Query: 160 RVFLRPSKARPTLDVVGPLIQSLMSPMNEQADPSTEVPDTSSVPIDVGSEQMVDDHITAT 219
           RVFL P  A P+LDVVG LI+     + +  D S+ + +T     D       ++ + + 
Sbjct: 171 RVFLLPPGASPSLDVVGHLIKGGEEDVEKSLDDSSPLKETEKGLAD-------ENGLGSN 223

Query: 220 PEDNSVGPRRRMMGPAMPSXXXXXXXXXXXXXXXXXREAAGD-DDELFFGPPPPAMINEA 278
             D+  GP++R++GPAMPS                 REA  + D E F GP PPA++ E 
Sbjct: 224 SADDVTGPKKRVIGPAMPSAELLAAAAKLTEAQAELREAELEEDSEYFIGPAPPAVVAEV 283

Query: 279 ESANEAERFEEVTRIMEVDADSPYDVLGVNHNMSSANVKKRYWKISLLVHPDKCSHPQAN 338
            S+NEAERFEEVTRIME DA+SPYDVLGVNHNM++ N+KKRYWK+SLLVHPDKCSHPQA 
Sbjct: 284 ASSNEAERFEEVTRIMEADANSPYDVLGVNHNMAADNMKKRYWKLSLLVHPDKCSHPQAQ 343

Query: 339 QAFIKLNKAFKDLQDPEKRKAMDDKIXXXXXXXXXXXXXXVMRENALWRRSQGISMEGDE 398
           +AF+ LNKAFK+LQDPEKRKAMDDKI               M+E A WRRSQGISMEGD 
Sbjct: 344 EAFVLLNKAFKELQDPEKRKAMDDKIKLKEEQEAFKVELRSMQEAAQWRRSQGISMEGDA 403

Query: 399 ELLAATEVKEEPKRDEWMTTLPPERKPGGMPTQSTTFSQGTKEGRGDTSAWTDTPSDRAQ 458
           ELLAATEVK EPKRDEWMTTLPPERK G    QSTTFS+  +EGRGDT+AWTDTP D+A+
Sbjct: 404 ELLAATEVKPEPKRDEWMTTLPPERKVGVAVQQSTTFSRNAREGRGDTTAWTDTPMDKAE 463

Query: 459 KAKMNYLEAYNEASALVSNEEDKKRANADADLVDKYNKAKRSKTLVQKHQE--------M 510
           +AKMNYLEAYN+ASAL SNE +  + + DA+LVDKYNK KR+K+LV+KH+E        +
Sbjct: 464 RAKMNYLEAYNKASALASNEGENMKRSMDAELVDKYNKEKRAKSLVEKHREDSSSSSSRL 523

Query: 511 VAGXXXXXXXXXXXXEDWAGQHPWKPWDREKDLTAGRQSVKLDPESMTQGLSSRFSAGNF 570
                          ++W G+HPWKPWDRE DLTAGRQ+VKLD + M +GL+S+FS+GNF
Sbjct: 524 KKKKKLSSSKEKTEKDEWVGKHPWKPWDRENDLTAGRQNVKLDADGMAEGLASKFSSGNF 583

Query: 571 QRNFL 575
           QR+FL
Sbjct: 584 QRSFL 588


>AT5G22080.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr5:7310600-7313540 REVERSE LENGTH=246
          Length = 246

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 51/77 (66%)

Query: 281 ANEAERFEEVTRIMEVDADSPYDVLGVNHNMSSANVKKRYWKISLLVHPDKCSHPQANQA 340
             E ER  EV RI+     +P++ L ++ + S+ +VK++Y KISL+VHPDKC HPQA +A
Sbjct: 19  VGEVERDNEVGRILSCFKLNPFEHLNLSFDSSTDDVKRQYRKISLMVHPDKCKHPQAQEA 78

Query: 341 FIKLNKAFKDLQDPEKR 357
           F  L KA + L + ++R
Sbjct: 79  FGALAKAQQLLLNDQER 95


>AT5G22080.2 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr5:7310600-7313540 REVERSE LENGTH=228
          Length = 228

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 45/67 (67%)

Query: 281 ANEAERFEEVTRIMEVDADSPYDVLGVNHNMSSANVKKRYWKISLLVHPDKCSHPQANQA 340
             E ER  EV RI+     +P++ L ++ + S+ +VK++Y KISL+VHPDKC HPQA +A
Sbjct: 19  VGEVERDNEVGRILSCFKLNPFEHLNLSFDSSTDDVKRQYRKISLMVHPDKCKHPQAQEA 78

Query: 341 FIKLNKA 347
           F  L KA
Sbjct: 79  FGALAKA 85


>AT3G57340.2 | Symbols:  | Heat shock protein DnaJ, N-terminal with
           domain of unknown function (DUF1977) |
           chr3:21219175-21220278 FORWARD LENGTH=367
          Length = 367

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 39/60 (65%)

Query: 302 YDVLGVNHNMSSANVKKRYWKISLLVHPDKCSHPQANQAFIKLNKAFKDLQDPEKRKAMD 361
           Y++LG+  N S  +V+K Y K+SL VHPDK   P + +AF  ++KAF+ L + E RK  D
Sbjct: 115 YEILGLESNCSVDDVRKAYRKLSLKVHPDKNQAPGSEEAFKSVSKAFQCLSNDEARKKYD 174


>AT3G57340.1 | Symbols:  | Heat shock protein DnaJ, N-terminal with
           domain of unknown function (DUF1977) |
           chr3:21219175-21220278 FORWARD LENGTH=367
          Length = 367

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 39/60 (65%)

Query: 302 YDVLGVNHNMSSANVKKRYWKISLLVHPDKCSHPQANQAFIKLNKAFKDLQDPEKRKAMD 361
           Y++LG+  N S  +V+K Y K+SL VHPDK   P + +AF  ++KAF+ L + E RK  D
Sbjct: 115 YEILGLESNCSVDDVRKAYRKLSLKVHPDKNQAPGSEEAFKSVSKAFQCLSNDEARKKYD 174


>AT4G39150.2 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr4:18233651-18235740
           REVERSE LENGTH=345
          Length = 345

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 302 YDVLGVNHNMSSANVKKRYWKISLLVHPDKC-SHPQANQAFIKLNKAFKDLQDPEKRKAM 360
           YD+LGV  + S A +KK Y+  +  VHPDK    PQA + F  L +A++ L DPEKR A 
Sbjct: 8   YDILGVKIDASGAEIKKAYYVQARQVHPDKNPGDPQAAKNFQILGEAYQVLGDPEKRTAY 67

Query: 361 D 361
           D
Sbjct: 68  D 68


>AT4G39150.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr4:18233651-18235740
           REVERSE LENGTH=345
          Length = 345

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 302 YDVLGVNHNMSSANVKKRYWKISLLVHPDKC-SHPQANQAFIKLNKAFKDLQDPEKRKAM 360
           YD+LGV  + S A +KK Y+  +  VHPDK    PQA + F  L +A++ L DPEKR A 
Sbjct: 8   YDILGVKIDASGAEIKKAYYVQARQVHPDKNPGDPQAAKNFQILGEAYQVLGDPEKRTAY 67

Query: 361 D 361
           D
Sbjct: 68  D 68


>AT5G05750.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr5:1727595-1728479 FORWARD
           LENGTH=294
          Length = 294

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 39/60 (65%)

Query: 302 YDVLGVNHNMSSANVKKRYWKISLLVHPDKCSHPQANQAFIKLNKAFKDLQDPEKRKAMD 361
           Y++LG+  N S  +++K Y K+SL VHPDK   P + +AF  ++KAF+ L + + R+  D
Sbjct: 116 YEILGLKSNCSVEDLRKSYRKLSLKVHPDKNKAPGSEEAFKSVSKAFQCLSNEDTRRKYD 175


>AT5G49060.1 | Symbols:  | Heat shock protein DnaJ, N-terminal with
           domain of unknown function (DUF1977) |
           chr5:19886764-19888136 FORWARD LENGTH=354
          Length = 354

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 36/60 (60%)

Query: 302 YDVLGVNHNMSSANVKKRYWKISLLVHPDKCSHPQANQAFIKLNKAFKDLQDPEKRKAMD 361
           Y +LG+  N S   ++K Y K+SL VHPDK   P + +AF K++KAF  L D   R+  D
Sbjct: 101 YAILGLEKNCSVDEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQFD 160


>AT3G06778.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr3:2140249-2141437 REVERSE LENGTH=229
          Length = 229

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 40/60 (66%)

Query: 302 YDVLGVNHNMSSANVKKRYWKISLLVHPDKCSHPQANQAFIKLNKAFKDLQDPEKRKAMD 361
           Y +LG+  +     ++KRY K++L VHPDK +HP+A+ AF  +++A+  L D  KR++ +
Sbjct: 44  YLILGIQEDAEVKVIRKRYHKLALKVHPDKNNHPKADIAFKLIHEAYLCLSDETKRRSFN 103


>AT1G61770.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr1:22810220-22812370 FORWARD LENGTH=300
          Length = 300

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 46/78 (58%)

Query: 287 FEEVTRIMEVDADSPYDVLGVNHNMSSANVKKRYWKISLLVHPDKCSHPQANQAFIKLNK 346
           F + +  +   A+  Y +LGV  + +++++K+ Y+K+SL  HPDK   P++ + F+K+  
Sbjct: 21  FVQSSTAIYCGAEDCYALLGVAQDANASDIKRSYYKLSLQHHPDKNPDPESRKLFVKIAT 80

Query: 347 AFKDLQDPEKRKAMDDKI 364
           A++ L+D   R   D  I
Sbjct: 81  AYEILKDNTTRAQYDYAI 98


>AT1G21080.3 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:7378822-7382275 REVERSE
           LENGTH=400
          Length = 400

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 302 YDVLGVNHNMSSANVKKRYWKISLLVHPDKCSH-PQANQAFIKLNKAFKDLQDPEKRKAM 360
           YDVLGV+   + A +KK Y+  +  VHPDK  + PQA   F  L +A++ L DP +R+A 
Sbjct: 8   YDVLGVSPTATEAEIKKAYYIKARQVHPDKNPNDPQAAHNFQVLGEAYQVLSDPGQRQAY 67

Query: 361 D 361
           D
Sbjct: 68  D 68


>AT1G21080.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr1:7378822-7382275 REVERSE
           LENGTH=391
          Length = 391

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 302 YDVLGVNHNMSSANVKKRYWKISLLVHPDKCSH-PQANQAFIKLNKAFKDLQDPEKRKAM 360
           YDVLGV+   + A +KK Y+  +  VHPDK  + PQA   F  L +A++ L DP +R+A 
Sbjct: 8   YDVLGVSPTATEAEIKKAYYIKARQVHPDKNPNDPQAAHNFQVLGEAYQVLSDPGQRQAY 67

Query: 361 D 361
           D
Sbjct: 68  D 68


>AT1G24120.1 | Symbols: ARL1 | ARG1-like 1 | chr1:8529283-8531946
           REVERSE LENGTH=436
          Length = 436

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 301 PYDVLGVNHNMSSANVKKRYWKISLLVHPDKCSH-PQANQAFIKLNKAFKDLQDPEKRKA 359
           PY+VLGV  N +   +K  Y K++L  HPDK ++ P A   F ++  ++  L DPEKR+ 
Sbjct: 21  PYEVLGVLRNSTDQEIKSAYRKLALKYHPDKTANDPVAADMFKEVTFSYNILSDPEKRRQ 80

Query: 360 MD 361
            D
Sbjct: 81  FD 82


>AT3G08970.1 | Symbols: ATERDJ3A, TMS1 | DNAJ heat shock N-terminal
           domain-containing protein | chr3:2737589-2740265 FORWARD
           LENGTH=572
          Length = 572

 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%)

Query: 301 PYDVLGVNHNMSSANVKKRYWKISLLVHPDKCSHPQANQAFIKLNKAFKDLQDPEKRKAM 360
           PY VLGV+ +     ++K + K SL  HPDK     A + F ++N A++ L D EKRK  
Sbjct: 28  PYKVLGVSKDAKQREIQKAFHKQSLKYHPDKNKDKGAQEKFAEINNAYEILSDEEKRKNY 87

Query: 361 D 361
           D
Sbjct: 88  D 88


>AT2G21510.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr2:9210841-9212699 REVERSE
           LENGTH=346
          Length = 346

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 302 YDVLGVNHNMSSANVKKRYWKISLLVHPDKC-SHPQANQAFIKLNKAFKDLQDPEKRKAM 360
           Y++LGV  + S A +KK Y+  +  VHPDK    PQA + F  L +A++ L +P+KR A 
Sbjct: 8   YEILGVKTDASDAEIKKAYYLKARKVHPDKNPGDPQAAKNFQVLGEAYQVLSNPDKRAAY 67

Query: 361 D 361
           D
Sbjct: 68  D 68