Miyakogusa Predicted Gene

Lj5g3v1853480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1853480.1 Non Chatacterized Hit- tr|D7SR85|D7SR85_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,63.51,2e-19,GASA,Gibberellin regulated protein,CUFF.56068.1
         (141 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G09600.1 | Symbols: GASA3 | GAST1 protein homolog 3 | chr4:60...    99   9e-22
AT1G22690.3 | Symbols:  | Gibberellin-regulated family protein |...    93   5e-20
AT1G22690.2 | Symbols:  | Gibberellin-regulated family protein |...    93   5e-20
AT1G22690.1 | Symbols:  | Gibberellin-regulated family protein |...    93   5e-20
AT1G74670.1 | Symbols:  | Gibberellin-regulated family protein |...    86   6e-18
AT4G09610.1 | Symbols: GASA2 | GAST1 protein homolog 2 | chr4:60...    84   3e-17
AT1G75750.2 | Symbols: GASA1 | GAST1 protein homolog 1 | chr1:28...    82   9e-17
AT1G75750.1 | Symbols: GASA1 | GAST1 protein homolog 1 | chr1:28...    80   4e-16
AT2G18420.1 | Symbols:  | Gibberellin-regulated family protein |...    80   6e-16
AT1G10588.1 | Symbols:  | Gibberellin-regulated family protein |...    76   6e-15
AT1G10588.2 | Symbols:  | Gibberellin-regulated family protein |...    76   6e-15
AT2G39540.1 | Symbols:  | Gibberellin-regulated family protein |...    76   6e-15
AT5G14920.1 | Symbols:  | Gibberellin-regulated family protein |...    75   2e-14
AT5G15230.1 | Symbols: GASA4 | GAST1 protein homolog 4 | chr5:49...    75   2e-14
AT5G59845.1 | Symbols:  | Gibberellin-regulated family protein |...    75   2e-14
AT5G15230.2 | Symbols: GASA4 | GAST1 protein homolog 4 | chr5:49...    67   4e-12
AT2G14900.1 | Symbols:  | Gibberellin-regulated family protein |...    64   4e-11
AT3G10185.1 | Symbols:  | Gibberellin-regulated family protein |...    57   3e-09
AT3G02885.1 | Symbols: GASA5 | GAST1 protein homolog 5 | chr3:63...    56   1e-08
AT2G30810.1 | Symbols:  | Gibberellin-regulated family protein |...    52   2e-07

>AT4G09600.1 | Symbols: GASA3 | GAST1 protein homolog 3 |
           chr4:6073014-6073516 REVERSE LENGTH=99
          Length = 99

 Score = 99.0 bits (245), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 53/64 (82%)

Query: 78  LYKIDCGGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGK 137
           + KIDCGG+C  RCSK+S+   C+RACNSCC RC+CVPPGT GN H+CPCYA +TT GG+
Sbjct: 36  VVKIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGR 95

Query: 138 LKCP 141
           LKCP
Sbjct: 96  LKCP 99


>AT1G22690.3 | Symbols:  | Gibberellin-regulated family protein |
           chr1:8027328-8027961 FORWARD LENGTH=119
          Length = 119

 Score = 93.2 bits (230), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 11/118 (9%)

Query: 35  KQLVAMSFAKSTLIFAILCLILVQ-----------ELEICEGNQDMDAVHHHHHLYKIDC 83
           K++  ++F    + F +L  +L +             +  + NQ       +HH  +I+C
Sbjct: 2   KKMNVVAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINC 61

Query: 84  GGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGKLKCP 141
           G  C+ RCSK S+ K C RAC SCC +C CVPPGT GN   CPCYA + THG KLKCP
Sbjct: 62  GHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119


>AT1G22690.2 | Symbols:  | Gibberellin-regulated family protein |
           chr1:8027328-8027961 FORWARD LENGTH=119
          Length = 119

 Score = 93.2 bits (230), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 11/118 (9%)

Query: 35  KQLVAMSFAKSTLIFAILCLILVQ-----------ELEICEGNQDMDAVHHHHHLYKIDC 83
           K++  ++F    + F +L  +L +             +  + NQ       +HH  +I+C
Sbjct: 2   KKMNVVAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINC 61

Query: 84  GGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGKLKCP 141
           G  C+ RCSK S+ K C RAC SCC +C CVPPGT GN   CPCYA + THG KLKCP
Sbjct: 62  GHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119


>AT1G22690.1 | Symbols:  | Gibberellin-regulated family protein |
           chr1:8027328-8027961 FORWARD LENGTH=119
          Length = 119

 Score = 93.2 bits (230), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 11/118 (9%)

Query: 35  KQLVAMSFAKSTLIFAILCLILVQ-----------ELEICEGNQDMDAVHHHHHLYKIDC 83
           K++  ++F    + F +L  +L +             +  + NQ       +HH  +I+C
Sbjct: 2   KKMNVVAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINC 61

Query: 84  GGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGKLKCP 141
           G  C+ RCSK S+ K C RAC SCC +C CVPPGT GN   CPCYA + THG KLKCP
Sbjct: 62  GHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119


>AT1G74670.1 | Symbols:  | Gibberellin-regulated family protein |
           chr1:28053378-28053893 FORWARD LENGTH=101
          Length = 101

 Score = 86.3 bits (212), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 54/104 (51%), Gaps = 6/104 (5%)

Query: 38  VAMSFAKSTLIFAILCLILVQELEICEGNQDMDAVHHHHHLYKIDCGGKCSHRCSKASKH 97
           +  SF   T++F  +CL + +E E           +    L    CGG+C+ RCS    H
Sbjct: 4   LITSFLLLTILFTFVCLTMSKEAEY------HPESYGPGSLKSYQCGGQCTRRCSNTKYH 57

Query: 98  KRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGKLKCP 141
           K CM  C  CC +C CVPPGTYGNK VCPCY    T  G  KCP
Sbjct: 58  KPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101


>AT4G09610.1 | Symbols: GASA2 | GAST1 protein homolog 2 |
           chr4:6074927-6075573 REVERSE LENGTH=99
          Length = 99

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 56/72 (77%)

Query: 70  DAVHHHHHLYKIDCGGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYA 129
           D       + KIDCGG+C  RCSK+S+ K C+RACNSCC RC+CVPPGT GN H+CPCYA
Sbjct: 28  DGAKVGEGVVKIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYA 87

Query: 130 KLTTHGGKLKCP 141
            +TTHGG+LKCP
Sbjct: 88  SITTHGGRLKCP 99


>AT1G75750.2 | Symbols: GASA1 | GAST1 protein homolog 1 |
           chr1:28441813-28442284 REVERSE LENGTH=97
          Length = 97

 Score = 82.4 bits (202), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 49/74 (66%)

Query: 68  DMDAVHHHHHLYKIDCGGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPC 127
           D ++   + +  KIDCG  C  RC  + + + C RAC +CC RC+CVPPGTYGN   C C
Sbjct: 24  DENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQC 83

Query: 128 YAKLTTHGGKLKCP 141
           YA LTTHGG+ KCP
Sbjct: 84  YASLTTHGGRRKCP 97


>AT1G75750.1 | Symbols: GASA1 | GAST1 protein homolog 1 |
           chr1:28441813-28442284 REVERSE LENGTH=98
          Length = 98

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 48/72 (66%)

Query: 70  DAVHHHHHLYKIDCGGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYA 129
           ++   + +  KIDCG  C  RC  + + + C RAC +CC RC+CVPPGTYGN   C CYA
Sbjct: 27  NSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYA 86

Query: 130 KLTTHGGKLKCP 141
            LTTHGG+ KCP
Sbjct: 87  SLTTHGGRRKCP 98


>AT2G18420.1 | Symbols:  | Gibberellin-regulated family protein |
           chr2:7993861-7994334 FORWARD LENGTH=94
          Length = 94

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 37/62 (59%), Positives = 43/62 (69%)

Query: 80  KIDCGGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGKLK 139
           KIDC  +C  RCS +S+   C RAC +CC RC+CV PGT GN   CPCY  LTTHGG+ K
Sbjct: 33  KIDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRK 92

Query: 140 CP 141
           CP
Sbjct: 93  CP 94


>AT1G10588.1 | Symbols:  | Gibberellin-regulated family protein |
           chr1:3501276-3501655 FORWARD LENGTH=90
          Length = 90

 Score = 76.3 bits (186), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 1/60 (1%)

Query: 83  CGGKCSHRCSKASK-HKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGKLKCP 141
           CGGKCS RCSKA + H+ C+  C+ CCQ+C+CVP GTYGNK  CPCY  +    G  KCP
Sbjct: 31  CGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDECPCYRDMKNSKGGSKCP 90


>AT1G10588.2 | Symbols:  | Gibberellin-regulated family protein |
           chr1:3501276-3501655 FORWARD LENGTH=89
          Length = 89

 Score = 76.3 bits (186), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 1/60 (1%)

Query: 83  CGGKCSHRCSKASK-HKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGKLKCP 141
           CGGKCS RCSKA + H+ C+  C+ CCQ+C+CVP GTYGNK  CPCY  +    G  KCP
Sbjct: 30  CGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDECPCYRDMKNSKGGSKCP 89


>AT2G39540.1 | Symbols:  | Gibberellin-regulated family protein |
           chr2:16500866-16501241 FORWARD LENGTH=87
          Length = 87

 Score = 76.3 bits (186), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 33/59 (55%), Positives = 43/59 (72%)

Query: 83  CGGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGKLKCP 141
           CGGKC+ RCSKA +H+ C++ CN CCQ+C+CVP GT+G+K  CPCY  +    G  KCP
Sbjct: 29  CGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECPCYRDMKNSKGGSKCP 87


>AT5G14920.1 | Symbols:  | Gibberellin-regulated family protein |
           chr5:4826598-4827761 FORWARD LENGTH=275
          Length = 275

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 80  KIDCGGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVC-PCYAKLTTHGGKL 138
           +IDC   C  RC + S+   CMRAC +CC RC CVPPGTYGNK  C  CYA + T GGK 
Sbjct: 213 RIDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKS 272

Query: 139 KCP 141
           KCP
Sbjct: 273 KCP 275


>AT5G15230.1 | Symbols: GASA4 | GAST1 protein homolog 4 |
           chr5:4945017-4946025 FORWARD LENGTH=106
          Length = 106

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 4/107 (3%)

Query: 38  VAMSFAKSTLIFAILCLILVQELEICEGNQDMDAVHHHH---HLYKIDCGGKCSHRCSKA 94
           +A S+  +  +  ++ L ++Q + +     ++      +    L +  C  +C  RC K 
Sbjct: 1   MAKSYG-AIFLLTLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKT 59

Query: 95  SKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGKLKCP 141
             HK C+  CN CC++C CVPPG YGNK VC CY    T  G  KCP
Sbjct: 60  QYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106


>AT5G59845.1 | Symbols:  | Gibberellin-regulated family protein |
           chr5:24111443-24111808 FORWARD LENGTH=89
          Length = 89

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)

Query: 83  CGGKCSHRCSKASKHKRCMRACNSCCQRC-HCVPPGTYGNKHVCPCYAKLTTHGGKLKCP 141
           CGGKC+ RCSKA +  RC++ CN CC++C +CVP GTYGNK  CPCY  +    G  KCP
Sbjct: 30  CGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89


>AT5G15230.2 | Symbols: GASA4 | GAST1 protein homolog 4 |
           chr5:4945286-4946025 FORWARD LENGTH=83
          Length = 83

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 37/64 (57%)

Query: 78  LYKIDCGGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGK 137
           L +  C  +C  RC K   HK C+  CN CC++C CVPPG YGNK VC CY    T  G 
Sbjct: 20  LKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGG 79

Query: 138 LKCP 141
            KCP
Sbjct: 80  PKCP 83


>AT2G14900.1 | Symbols:  | Gibberellin-regulated family protein |
           chr2:6404210-6405043 FORWARD LENGTH=108
          Length = 108

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 35/59 (59%)

Query: 83  CGGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGKLKCP 141
           CG KC  RC +A    RC++ C  CC+ C CVP GTYGNKH C CY    +  G  KCP
Sbjct: 50  CGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108


>AT3G10185.1 | Symbols:  | Gibberellin-regulated family protein |
           chr3:3145579-3146199 FORWARD LENGTH=103
          Length = 103

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 11/108 (10%)

Query: 40  MSFAKSTLIFAILCLILVQE------LEICEGNQDMDAVHHHHHLYKIDCGGKCSHRCSK 93
           M+   S ++F+I+ L L+        + +C   +   A+        ++CG +C  RCS 
Sbjct: 1   MATKLSIIVFSIVVLHLLLSAHMHFLINVCAECETKSAIPPL-----LECGPRCGDRCSN 55

Query: 94  ASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGKLKCP 141
               K C+  CN CC +C CVPPGTYGNK VCPCY    T  G  KCP
Sbjct: 56  TQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103


>AT3G02885.1 | Symbols: GASA5 | GAST1 protein homolog 5 |
           chr3:638323-639011 REVERSE LENGTH=97
          Length = 97

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 40/73 (54%)

Query: 69  MDAVHHHHHLYKIDCGGKCSHRCSKASKHKRCMRACNSCCQRCHCVPPGTYGNKHVCPCY 128
           + A      L    C  KCS RCS  S  K CM  C  CC++C CVPPGT+GNK  CPCY
Sbjct: 25  VQAARGGGKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCY 84

Query: 129 AKLTTHGGKLKCP 141
               T  G+ KCP
Sbjct: 85  NNWKTKEGRPKCP 97


>AT2G30810.1 | Symbols:  | Gibberellin-regulated family protein |
           chr2:13127945-13128630 REVERSE LENGTH=106
          Length = 106

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 51/104 (49%), Gaps = 6/104 (5%)

Query: 44  KSTLIFAILCLILVQEL---EICEGNQDMDAVHHH---HHLYKIDCGGKCSHRCSKASKH 97
           K  ++F I  L+   +    +  E      A+H +     L   +C   C +RCS  S  
Sbjct: 3   KLIVVFVISSLLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHR 62

Query: 98  KRCMRACNSCCQRCHCVPPGTYGNKHVCPCYAKLTTHGGKLKCP 141
           K C+  CN CC +C CVP GTYG+K  CPCY   TT  G  KCP
Sbjct: 63  KPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106