Miyakogusa Predicted Gene
- Lj5g3v1812820.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1812820.1 Non Chatacterized Hit- tr|I1NHG1|I1NHG1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,76.1,0,no
description,DNA-binding pseudobarrel domain; DNA-binding pseudobarrel
domain,DNA-binding pseudoba,CUFF.55986.1
(613 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 537 e-153
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 515 e-146
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 322 3e-88
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 257 2e-68
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 256 2e-68
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 247 1e-65
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 247 2e-65
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 246 5e-65
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 243 2e-64
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 237 2e-62
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 232 5e-61
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 232 5e-61
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 232 5e-61
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 232 7e-61
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 218 1e-56
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 218 1e-56
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 218 1e-56
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 218 1e-56
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 211 2e-54
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 210 2e-54
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 210 3e-54
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 205 6e-53
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 205 7e-53
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 191 1e-48
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 189 4e-48
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 189 5e-48
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 189 5e-48
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 186 5e-47
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 180 3e-45
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 178 9e-45
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 177 2e-44
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 169 5e-42
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 162 6e-40
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 153 3e-37
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 150 2e-36
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 150 2e-36
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 150 2e-36
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 136 5e-32
ATMG00940.1 | Symbols: ORF164 | DNA binding | chrM:251403-251897... 82 2e-15
AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding fact... 66 8e-11
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 64 2e-10
AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor... 62 1e-09
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 61 3e-09
AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor... 60 3e-09
AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor fam... 59 9e-09
AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor fam... 59 1e-08
AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 | ch... 59 1e-08
AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | relate... 59 1e-08
AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor ... 58 2e-08
AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor fam... 57 3e-08
AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor fam... 57 4e-08
AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor... 55 1e-07
AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor fam... 52 2e-06
AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor fam... 52 2e-06
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 537 bits (1384), Expect = e-153, Method: Compositional matrix adjust.
Identities = 295/546 (54%), Positives = 356/546 (65%), Gaps = 22/546 (4%)
Query: 1 MFVVMDSMERTTERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQH 60
M VM+ M+ TE+ LD QLWHACAG MV+MPP+N+KVFYFPQGHAE+A+ ++FG
Sbjct: 1 MINVMNPMKGGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDC--VDFGNL 58
Query: 61 RVPPLIPCRVSAMKYMADPDTDEVFVKMRLTPLREHE-LDLEENDCSNFLGGNNNSEEKV 119
+PP++ CRV A+KYMAD ++DEVF K+RL PL++ E +D E D + G +NSE K
Sbjct: 59 PIPPMVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSE-KT 117
Query: 120 PSSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIY 179
PS FAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+AEPPVQTI+AKD+HG WKFRHIY
Sbjct: 118 PS-FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIY 176
Query: 180 RGTPRRHLLTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGW 239
RGTPRRHLLTTGWSNFVN K+LVAGDSIVF+RAENGDLCV +S+GW
Sbjct: 177 RGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGW 236
Query: 240 NNNQVAPTMFGSGFLCKSENNRKNGDEFFM----GRVTGXXXXXXXXXXXNGRPFEVVYY 295
N + + S L + E+N + G+VT +GRPFEVVYY
Sbjct: 237 N--PIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYY 294
Query: 296 PRASTPEFCVKASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWP 355
PRAST EFCVKA +A+M+I WCSGMRFKM FETEDSSRISWFMGT+S+V+V+DPIRWP
Sbjct: 295 PRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWP 354
Query: 356 DSPWRLLQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQRLIQDPYFHLI 415
+SPWRLLQV WDEPDLLQNVK VNPWLVELVSN+ L+ FSPPRKK RL Q P ++ +
Sbjct: 355 NSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNL 414
Query: 416 XXXXXXXXXXXXXXXXXXXXXXMKDNNYSSAGIQGARHV--QCGPTPSSDFPFKILQPDF 473
+ DN G+QGARH Q SSD L
Sbjct: 415 INSIPVPSFPSNPLIRSSPLSSVLDN--VPVGLQGARHNAHQYYGLSSSDLHHYYL---- 468
Query: 474 SRFDHETQPIRPHCGNGNSYKSSTKTNVDISCLLTVGNHGQSFKESNEVKAPHILLFGKI 533
+R P ++ N C LT+G + +S K HI+LFGK+
Sbjct: 469 NRPPPPPPPSSLQLSPSLGLRNIDTKNEKGFCFLTMGTTPCNDTKS---KKSHIVLFGKL 525
Query: 534 IHTEQK 539
I E++
Sbjct: 526 ILPEEQ 531
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 296/553 (53%), Positives = 351/553 (63%), Gaps = 38/553 (6%)
Query: 13 ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHRVPPLIPCRVSA 72
E+ LD QLWHACAG+MVQ+P LN+ VFYF QGH EHAH +F RVPPLI CRV +
Sbjct: 4 EKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHA--PPDFHAPRVPPLILCRVVS 61
Query: 73 MKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFL----GGNNNSEEKVPSSFAKTLT 128
+K++AD +TDEVF K+ L PL ++LDLE + GN N +EK P+SFAKTLT
Sbjct: 62 VKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEK-PASFAKTLT 120
Query: 129 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLL 188
QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQT+IAKD+HG+ WKFRHIYRGTPRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 180
Query: 189 TTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTM 248
TTGWS FVN K+L+AGDSIVFLR+E+GDLCV G N P
Sbjct: 181 TTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGL--------GSNAGSDNPYP 232
Query: 249 FGSGFLCKSE-------------NNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYY 295
SGFL E N +G+ GRV G+ FEVVYY
Sbjct: 233 GFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYY 292
Query: 296 PRASTPEFCVKASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWP 355
PRASTPEFCVKA+ V+++M+I+WCSGMRFKM FETEDSSRISWFMGT+S+V VADPIRWP
Sbjct: 293 PRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 352
Query: 356 DSPWRLLQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQRLIQDPYFHLI 415
+SPWRLLQV WDEPDLLQNVK V+PWLVELVSNMPT +LSPFS PRKK R+ Q F
Sbjct: 353 NSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFS-PRKKIRIPQPFEFPFH 411
Query: 416 XXXXXXXXXXXXXXXXXXXXXXMK-DNNYSSAGIQGARHV-QCGPTPSSDFPFKILQPDF 473
+ DNN + AGIQGAR Q +PS + +
Sbjct: 412 GTKFPIFSPGFANNGGGESMCYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSDLNLSSY 471
Query: 474 SRFDHETQP---IRPHCGNGNSYKSSTKTNV-DISCLLTVGNHG--QSFKES-NEVKAPH 526
+ + P + + Y++ N +ISC LT+GN Q K+S VK
Sbjct: 472 TGNNKLHSPAMFLSSFNPRHHHYQARDSENSNNISCSLTMGNPAMVQDKKKSVGSVKTHQ 531
Query: 527 ILLFGKIIHTEQK 539
+LFG+ I TEQ+
Sbjct: 532 FVLFGQPILTEQQ 544
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 205/544 (37%), Positives = 287/544 (52%), Gaps = 41/544 (7%)
Query: 14 RCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHRVPPLIPCRVSAM 73
R +D +W ACAGA VQ+P L+++V+YFPQGH EH ++ P +PC ++++
Sbjct: 14 REVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCP--LLSTLPSSTSP-VPCIITSI 70
Query: 74 KYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSSFAKTLTQSDAN 133
+ +ADP TDEVF + L P+ + + G+ + KV ++FAK LT SDAN
Sbjct: 71 QLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKV-TTFAKILTPSDAN 129
Query: 134 NGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGWS 193
NGGGFSVPR+CA+++FP L++ +PPVQ + D+HG W FRHIYRGTPRRHLLTTGWS
Sbjct: 130 NGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWS 189
Query: 194 NFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTEL------FSSGWNNNQVAPT 247
FVN K+L+AGDS+VF+R ++ + ++ ++ + VA
Sbjct: 190 KFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKE 249
Query: 248 MFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKA 307
GS + R++G+ G++T G PFEVV+YP A EF V+A
Sbjct: 250 DDGS----PKKTFRRSGN----GKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRA 301
Query: 308 SSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWD 367
V++SM + W G R KM ETEDSSRI+WF G +SS + + W SPW+ LQ+ WD
Sbjct: 302 EDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSS-TYQETGPWRGSPWKQLQITWD 360
Query: 368 EPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQRLIQDPYFHLIXXXXXXXXXXXX 427
EP++LQNVK VNPW VE+ ++ + +PF PP K+ + Q L
Sbjct: 361 EPEILQNVKRVNPWQVEIAAHATQLH-TPF-PPAKRLKYPQPGGGFLSGDDGEILYPQSG 418
Query: 428 XXXXXXXXXXMKDNNYSS--AGIQGARHVQCG---PT------PSSDFPFKILQ--PDFS 474
+YS+ AG+QGAR G PT P F L PD
Sbjct: 419 LSSAAAPDPSPSMFSYSTFPAGMQGARQYDFGSFNPTGFIGGNPPQLFTNNFLSPLPDLG 478
Query: 475 RFDHETQPIRPHCGNGNSYKSSTKTNVDISCLLTVGNHGQSFKESNEVKAPHILLFGKII 534
+ E + S S+T TN+ L VGN G K+ N ++ LFGKII
Sbjct: 479 KVSTEMMNFGSPPSDNLSPNSNT-TNLSSGNDL-VGNRGPLSKKVNSIQ-----LFGKII 531
Query: 535 HTEQ 538
E+
Sbjct: 532 TVEE 535
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 207/387 (53%), Gaps = 45/387 (11%)
Query: 13 ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQH-----RVPPLIP 67
E+CL+S+LWHACAG +V +P ++V YFPQGH+E H +PP +
Sbjct: 16 EKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLI 75
Query: 68 CRVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSS-FAKT 126
C++ + AD +TDEV+ +M L PL E F+ K PS+ F KT
Sbjct: 76 CQLHNVTMHADVETDEVYAQMTLQPLTP------EEQKETFVPIELGIPSKQPSNYFCKT 129
Query: 127 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRH 186
LT SD + GGFSVPR AE +FP LDY+ +PP Q +IA+D+H WKFRHI+RG P+RH
Sbjct: 130 LTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 189
Query: 187 LLTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAP 246
LLTTGWS FV+ KRLVAGDS++F+R E L + G +
Sbjct: 190 LLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFL------------------GIRHATRPQ 231
Query: 247 TMFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVK 306
T+ S L + D +G + F V ++PRAS EF ++
Sbjct: 232 TIVPSSVL--------SSDSMHIGLLAAAAHASATNSC-----FTVFFHPRASQSEFVIQ 278
Query: 307 ASS-VKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVV 365
S +KA + GMRF+M FETE+SS + +MGTI+ +S D +RWP+S WR ++V
Sbjct: 279 LSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITGISDLDSVRWPNSHWRSVKVG 337
Query: 366 WDEPDLLQNVKSVNPWLVELVSNMPTF 392
WDE + V+ W +E ++ P +
Sbjct: 338 WDESTAGERQPRVSLWEIEPLTTFPMY 364
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 207/387 (53%), Gaps = 45/387 (11%)
Query: 13 ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQH-----RVPPLIP 67
E+CL+S+LWHACAG +V +P ++V YFPQGH+E H +PP +
Sbjct: 16 EKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLI 75
Query: 68 CRVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSS-FAKT 126
C++ + AD +TDEV+ +M L PL E F+ K PS+ F KT
Sbjct: 76 CQLHNVTMHADVETDEVYAQMTLQPLTP------EEQKETFVPIELGIPSKQPSNYFCKT 129
Query: 127 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRH 186
LT SD + GGFSVPR AE +FP LDY+ +PP Q +IA+D+H WKFRHI+RG P+RH
Sbjct: 130 LTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 189
Query: 187 LLTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAP 246
LLTTGWS FV+ KRLVAGDS++F+R E L + G +
Sbjct: 190 LLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFL------------------GIRHATRPQ 231
Query: 247 TMFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVK 306
T+ S L + D +G + F V ++PRAS EF ++
Sbjct: 232 TIVPSSVL--------SSDSMHIGLLAAAAHASATNSC-----FTVFFHPRASQSEFVIQ 278
Query: 307 ASS-VKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVV 365
S +KA + GMRF+M FETE+SS + +MGTI+ +S D +RWP+S WR ++V
Sbjct: 279 LSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITGISDLDSVRWPNSHWRSVKVG 337
Query: 366 WDEPDLLQNVKSVNPWLVELVSNMPTF 392
WDE + V+ W +E ++ P +
Sbjct: 338 WDESTAGERQPRVSLWEIEPLTTFPMY 364
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 211/399 (52%), Gaps = 47/399 (11%)
Query: 13 ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQH-----RVPPLIP 67
+R L+S+LWHACAG +V +PP+ ++V YFPQGH+E H + P +
Sbjct: 19 KRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLI 78
Query: 68 CRVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSS-FAKT 126
C++ + AD +TDEV+ +M L PL E + D +L + P++ F KT
Sbjct: 79 CQLHNVTMHADVETDEVYAQMTLQPLNAQE----QKDP--YLPAELGVPSRQPTNYFCKT 132
Query: 127 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRH 186
LT SD + GGFSVPR AE +FP LDYS +PP Q ++A+D+H WKFRHI+RG P+RH
Sbjct: 133 LTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRH 192
Query: 187 LLTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAP 246
LLTTGWS FV+ KRLVAGDS++F+ + L + G
Sbjct: 193 LLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLL------------------GIRRANRPQ 234
Query: 247 TMFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVK 306
T+ S L D +G + N R F + Y PRAS EF +
Sbjct: 235 TVMPSSVLSS--------DSMHLGLLA----AAAHAAATNSR-FTIFYNPRASPSEFVIP 281
Query: 307 -ASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVV 365
A VKA + GMRF+M FETE+SS + +MGTI+ + DP RW +S WR ++V
Sbjct: 282 LAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGICDLDPTRWANSHWRSVKVG 340
Query: 366 WDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQ 404
WDE + V+ W +E ++ P + SPF P R K+
Sbjct: 341 WDESTAGERQPRVSLWEIEPLTTFPMYP-SPF-PLRLKR 377
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 211/399 (52%), Gaps = 47/399 (11%)
Query: 13 ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQH-----RVPPLIP 67
+R L+S+LWHACAG +V +PP+ ++V YFPQGH+E H + P +
Sbjct: 17 KRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLI 76
Query: 68 CRVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSS-FAKT 126
C++ + AD +TDEV+ +M L PL E + D +L + P++ F KT
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPLNAQE----QKDP--YLPAELGVPSRQPTNYFCKT 130
Query: 127 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRH 186
LT SD + GGFSVPR AE +FP LDYS +PP Q ++A+D+H WKFRHI+RG P+RH
Sbjct: 131 LTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRH 190
Query: 187 LLTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAP 246
LLTTGWS FV+ KRLVAGDS++F+ + L + G
Sbjct: 191 LLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLL------------------GIRRANRPQ 232
Query: 247 TMFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVK 306
T+ S L D +G + N R F + Y PRAS EF +
Sbjct: 233 TVMPSSVLSS--------DSMHLGLLA----AAAHAAATNSR-FTIFYNPRASPSEFVIP 279
Query: 307 -ASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVV 365
A VKA + GMRF+M FETE+SS + +MGTI+ + DP RW +S WR ++V
Sbjct: 280 LAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGICDLDPTRWANSHWRSVKVG 338
Query: 366 WDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQ 404
WDE + V+ W +E ++ P + SPF P R K+
Sbjct: 339 WDESTAGERQPRVSLWEIEPLTTFPMYP-SPF-PLRLKR 375
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 191/380 (50%), Gaps = 43/380 (11%)
Query: 11 TTERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQH-----RVPPL 65
T + ++S+LWHACAG +V +P + + V+YF QGH+E + + +P
Sbjct: 46 TRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQ 105
Query: 66 IPCRVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSSFAK 125
+ C+V + AD D+DE++ +M L P+ D G + +E F K
Sbjct: 106 LMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTE-----FFCK 160
Query: 126 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRR 185
TLT SD + GGFSVPR AE +FP LDYSA+PP Q ++ +D+H W FRHIYRG P+R
Sbjct: 161 TLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKR 220
Query: 186 HLLTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVA 245
HLLTTGWS FV KRL AGDS++F+R E L V G
Sbjct: 221 HLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMV------------------GVRRANRQ 262
Query: 246 PTMFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCV 305
T S L + D +G + N PF + Y PRA EF +
Sbjct: 263 QTALPSSVL--------SADSMHIGVLA-----AAAHATANRTPFLIFYNPRACPAEFVI 309
Query: 306 K-ASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQV 364
A KA Q GMRF M FETEDS + +MGTI +S DP+RWP S WR LQV
Sbjct: 310 PLAKYRKAICGSQLSVGMRFGMMFETEDSGK-RRYMGTIVGISDLDPLRWPGSKWRNLQV 368
Query: 365 VWDEPDLLQNVKSVNPWLVE 384
WDEP V+PW +E
Sbjct: 369 EWDEPGCNDKPTRVSPWDIE 388
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 203/378 (53%), Gaps = 41/378 (10%)
Query: 13 ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEH--AHGGGKINF--GQHRVPPLIPC 68
++ ++SQLWHACAG +V +PP+ + V YFPQGH+E A + +F +P + C
Sbjct: 17 KKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLIC 76
Query: 69 RVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSSFAKTLT 128
+ ++ AD +TDEV+ +M L P+ +++ E ++ +G N + F KTLT
Sbjct: 77 LLHSVTLHADTETDEVYAQMTLQPVNKYD---REALLASDMGLKLNRQPT--EFFCKTLT 131
Query: 129 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLL 188
SD + GGFSVPR AE IFP LD+S +PP Q I+AKD+H W FRHIYRG P+RHLL
Sbjct: 132 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLL 191
Query: 189 TTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTM 248
TTGWS FV+ KRL AGDS++F+R E L + N+ PT+
Sbjct: 192 TTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRA-----------------NRQTPTL 234
Query: 249 FGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKAS 308
++ + D +G + N PF + + PRAS EF V +
Sbjct: 235 ---------SSSVISSDSMHIGILA-----AAAHANANSSPFTIFFNPRASPSEFVVPLA 280
Query: 309 SVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWDE 368
++ Q GMRF+M FETED + +MGT++ +S DP+RW S WR LQV WDE
Sbjct: 281 KYNKALYAQVSLGMRFRMMFETEDCG-VRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDE 339
Query: 369 PDLLQNVKSVNPWLVELV 386
V+ W +E V
Sbjct: 340 STAGDRPSRVSIWEIEPV 357
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 191/377 (50%), Gaps = 47/377 (12%)
Query: 15 CLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHRVPPLIPCRVSAMK 74
CL +LWHACAG ++ +P + V YFPQGH E A +G +PP + CR+ +K
Sbjct: 52 CL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAAIYG---LPPHVFCRILDVK 106
Query: 75 YMADPDTDEVFVKMRLTPLREHELDLEENDCSNFL---GGNNNSE----EKVPSSFAKTL 127
A+ TDEV+ ++ L P E D+E + GG + E P F KTL
Sbjct: 107 LHAETTTDEVYAQVSLLPESE---DIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTL 163
Query: 128 TQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHL 187
T SD + GGFSVPR AE FP LDYS P Q ++A+D+HG W+FRHIYRG PRRHL
Sbjct: 164 TASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHL 223
Query: 188 LTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPT 247
LTTGWS FVN K+LV+GD+++FLR ++G L + + A
Sbjct: 224 LTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGV---------------------RRASQ 262
Query: 248 MFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKA 307
+ G+ L N N + F F + Y P+AS F + A
Sbjct: 263 IEGTAALSAQYNQNMNHNNF----------SEVAHAISTHSVFSISYNPKASWSNFIIPA 312
Query: 308 SSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWD 367
+ +C GMRFK E+ED+S G IS +S DPIRWP S WR L V WD
Sbjct: 313 PKFLKVVDYPFCIGMRFKARVESEDASE-RRSPGIISGISDLDPIRWPGSKWRCLLVRWD 371
Query: 368 EPDLLQNVKSVNPWLVE 384
+ + + V+PW +E
Sbjct: 372 DIVANGHQQRVSPWEIE 388
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 194/403 (48%), Gaps = 57/403 (14%)
Query: 13 ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQ----HRVPPLIPC 68
E L +LWHACAG +V +P + +VFYFPQGH E Q + +P + C
Sbjct: 55 EAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLC 114
Query: 69 RVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPS------- 121
RV + A+ DTDEV+ ++ L P E + +EN E +P
Sbjct: 115 RVINVDLKAEADTDEVYAQITLLP----EANQDENAIEK--------EAPLPPPPRFQVH 162
Query: 122 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRG 181
SF KTLT SD + GGFSV R A+ P LD S +PP Q ++AKD+H W+FRHI+RG
Sbjct: 163 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRG 222
Query: 182 TPRRHLLTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNN 241
PRRHLL +GWS FV+ KRLVAGD+ +FLR ENG+L V +
Sbjct: 223 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP--------S 274
Query: 242 NQVAPTMFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTP 301
+ ++ G L + + G F V Y PR S
Sbjct: 275 SVISSHSMHLGVLATAWHAISTGTMF-----------------------TVYYKPRTSPS 311
Query: 302 EFCVKASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRL 361
EF V S++ + GMRFKM FE E++ F GTI + +DP RWP S WR
Sbjct: 312 EFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEESDPTRWPKSKWRS 370
Query: 362 LQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQ 404
L+V WDE + V+PW VE P LSP PR K+
Sbjct: 371 LKVRWDETSSIPRPDRVSPWKVEPALAPPA--LSPVPMPRPKR 411
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 194/403 (48%), Gaps = 57/403 (14%)
Query: 13 ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQ----HRVPPLIPC 68
E L +LWHACAG +V +P + +VFYFPQGH E Q + +P + C
Sbjct: 55 EAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLC 114
Query: 69 RVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPS------- 121
RV + A+ DTDEV+ ++ L P E + +EN E +P
Sbjct: 115 RVINVDLKAEADTDEVYAQITLLP----EANQDENAIEK--------EAPLPPPPRFQVH 162
Query: 122 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRG 181
SF KTLT SD + GGFSV R A+ P LD S +PP Q ++AKD+H W+FRHI+RG
Sbjct: 163 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRG 222
Query: 182 TPRRHLLTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNN 241
PRRHLL +GWS FV+ KRLVAGD+ +FLR ENG+L V +
Sbjct: 223 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP--------S 274
Query: 242 NQVAPTMFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTP 301
+ ++ G L + + G F V Y PR S
Sbjct: 275 SVISSHSMHLGVLATAWHAISTGTMF-----------------------TVYYKPRTSPS 311
Query: 302 EFCVKASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRL 361
EF V S++ + GMRFKM FE E++ F GTI + +DP RWP S WR
Sbjct: 312 EFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEESDPTRWPKSKWRS 370
Query: 362 LQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQ 404
L+V WDE + V+PW VE P LSP PR K+
Sbjct: 371 LKVRWDETSSIPRPDRVSPWKVEPALAPPA--LSPVPMPRPKR 411
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 194/403 (48%), Gaps = 57/403 (14%)
Query: 13 ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQ----HRVPPLIPC 68
E L +LWHACAG +V +P + +VFYFPQGH E Q + +P + C
Sbjct: 55 EAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLC 114
Query: 69 RVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPS------- 121
RV + A+ DTDEV+ ++ L P E + +EN E +P
Sbjct: 115 RVINVDLKAEADTDEVYAQITLLP----EANQDENAIEK--------EAPLPPPPRFQVH 162
Query: 122 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRG 181
SF KTLT SD + GGFSV R A+ P LD S +PP Q ++AKD+H W+FRHI+RG
Sbjct: 163 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRG 222
Query: 182 TPRRHLLTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNN 241
PRRHLL +GWS FV+ KRLVAGD+ +FLR ENG+L V +
Sbjct: 223 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP--------S 274
Query: 242 NQVAPTMFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTP 301
+ ++ G L + + G F V Y PR S
Sbjct: 275 SVISSHSMHLGVLATAWHAISTGTMF-----------------------TVYYKPRTSPS 311
Query: 302 EFCVKASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRL 361
EF V S++ + GMRFKM FE E++ F GTI + +DP RWP S WR
Sbjct: 312 EFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEESDPTRWPKSKWRS 370
Query: 362 LQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQ 404
L+V WDE + V+PW VE P LSP PR K+
Sbjct: 371 LKVRWDETSSIPRPDRVSPWKVEPALAPPA--LSPVPMPRPKR 411
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 148/403 (36%), Positives = 194/403 (48%), Gaps = 57/403 (14%)
Query: 13 ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQ----HRVPPLIPC 68
E L +LWHACAG +V +P + +VFYFPQGH E Q + +P + C
Sbjct: 55 EAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLC 114
Query: 69 RVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPS------- 121
RV + A+ DTDEV+ ++ L P E + +EN E +P
Sbjct: 115 RVINVDLKAEADTDEVYAQITLLP----EANQDENAIEK--------EAPLPPPPRFQVH 162
Query: 122 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRG 181
SF KTLT SD + GGFSV R A+ P LD S +PP Q ++AKD+H W+FRHI+RG
Sbjct: 163 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRG 222
Query: 182 TPRRHLLTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNN 241
PRRHLL +GWS FV+ KRLVAGD+ +FLR ENG+L V +
Sbjct: 223 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP--------S 274
Query: 242 NQVAPTMFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTP 301
+ ++ G L + + G F V Y PR S
Sbjct: 275 SVISSHSMHLGVLATAWHAISTGTMF-----------------------TVYYKPRTSPS 311
Query: 302 EFCVKASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRL 361
EF V S++ + GMRFKM FE E++ F GTI + +DP RWP S WR
Sbjct: 312 EFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEESDPTRWPKSKWRS 370
Query: 362 LQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQ 404
L+V WDE + V+PW VE P LSP PR K+
Sbjct: 371 LKVRWDETSSIPRPDRVSPWKVEPALAPPA--LSPVPMPRPKR 411
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 196/396 (49%), Gaps = 48/396 (12%)
Query: 15 CLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEH----AHGGGKINFGQHRVPPLIPCRV 70
L +LWHACAG +V +P +V+YFP+GH E H G + +P I C+V
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77
Query: 71 SAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSSFAKTLTQS 130
++ A+P+TDEV+ ++ L P +L++++ ++ E+ SF KTLT S
Sbjct: 78 INIQRRAEPETDEVYAQITLLP------ELDQSEPTSPDAPVQEPEKCTVHSFCKTLTAS 131
Query: 131 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTT 190
D + GGFSV R A+ P LD S +PP Q ++A D+H W FRHI+RG PRRHLLTT
Sbjct: 132 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTT 191
Query: 191 GWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTMFG 250
GWS FV+ K+LVAGD+ +FLR EN +L V G + T
Sbjct: 192 GWSVFVSSKKLVAGDAFIFLRGENEELRV------------------GVRRHMRQQTNIP 233
Query: 251 SGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKASSV 310
S + + +G + G F V Y PR S EF V +
Sbjct: 234 SSVI--------SSHSMHIGVLA-----TAAHAITTGTIFSVFYKPRTSRSEFIVSVNRY 280
Query: 311 KASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWDEPD 370
+ + GMRFKM FE E++ F GTI V W DS WR L+V WDEP
Sbjct: 281 LEAKTQKLSVGMRFKMRFEGEEAPE-KRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPS 339
Query: 371 LLQNVKSVNPWLVE-LVSNMPTFNLSPFSPPRKKQR 405
+ + V+PW +E LV+N +P S P+ QR
Sbjct: 340 SVFRPERVSPWELEPLVANS-----TPSSQPQPPQR 370
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 196/396 (49%), Gaps = 48/396 (12%)
Query: 15 CLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEH----AHGGGKINFGQHRVPPLIPCRV 70
L +LWHACAG +V +P +V+YFP+GH E H G + +P I C+V
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77
Query: 71 SAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSSFAKTLTQS 130
++ A+P+TDEV+ ++ L P +L++++ ++ E+ SF KTLT S
Sbjct: 78 INIQRRAEPETDEVYAQITLLP------ELDQSEPTSPDAPVQEPEKCTVHSFCKTLTAS 131
Query: 131 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTT 190
D + GGFSV R A+ P LD S +PP Q ++A D+H W FRHI+RG PRRHLLTT
Sbjct: 132 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTT 191
Query: 191 GWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTMFG 250
GWS FV+ K+LVAGD+ +FLR EN +L V G + T
Sbjct: 192 GWSVFVSSKKLVAGDAFIFLRGENEELRV------------------GVRRHMRQQTNIP 233
Query: 251 SGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKASSV 310
S + + +G + G F V Y PR S EF V +
Sbjct: 234 SSVI--------SSHSMHIGVLA-----TAAHAITTGTIFSVFYKPRTSRSEFIVSVNRY 280
Query: 311 KASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWDEPD 370
+ + GMRFKM FE E++ F GTI V W DS WR L+V WDEP
Sbjct: 281 LEAKTQKLSVGMRFKMRFEGEEAPE-KRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPS 339
Query: 371 LLQNVKSVNPWLVE-LVSNMPTFNLSPFSPPRKKQR 405
+ + V+PW +E LV+N +P S P+ QR
Sbjct: 340 SVFRPERVSPWELEPLVANS-----TPSSQPQPPQR 370
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 196/396 (49%), Gaps = 48/396 (12%)
Query: 15 CLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEH----AHGGGKINFGQHRVPPLIPCRV 70
L +LWHACAG +V +P +V+YFP+GH E H G + +P I C+V
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77
Query: 71 SAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSSFAKTLTQS 130
++ A+P+TDEV+ ++ L P +L++++ ++ E+ SF KTLT S
Sbjct: 78 INIQRRAEPETDEVYAQITLLP------ELDQSEPTSPDAPVQEPEKCTVHSFCKTLTAS 131
Query: 131 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTT 190
D + GGFSV R A+ P LD S +PP Q ++A D+H W FRHI+RG PRRHLLTT
Sbjct: 132 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTT 191
Query: 191 GWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTMFG 250
GWS FV+ K+LVAGD+ +FLR EN +L V G + T
Sbjct: 192 GWSVFVSSKKLVAGDAFIFLRGENEELRV------------------GVRRHMRQQTNIP 233
Query: 251 SGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKASSV 310
S + + +G + G F V Y PR S EF V +
Sbjct: 234 SSVI--------SSHSMHIGVLA-----TAAHAITTGTIFSVFYKPRTSRSEFIVSVNRY 280
Query: 311 KASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWDEPD 370
+ + GMRFKM FE E++ F GTI V W DS WR L+V WDEP
Sbjct: 281 LEAKTQKLSVGMRFKMRFEGEEAPE-KRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPS 339
Query: 371 LLQNVKSVNPWLVE-LVSNMPTFNLSPFSPPRKKQR 405
+ + V+PW +E LV+N +P S P+ QR
Sbjct: 340 SVFRPERVSPWELEPLVANS-----TPSSQPQPPQR 370
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 196/396 (49%), Gaps = 48/396 (12%)
Query: 15 CLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEH----AHGGGKINFGQHRVPPLIPCRV 70
L +LWHACAG +V +P +V+YFP+GH E H G + +P I C+V
Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKV 77
Query: 71 SAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSSFAKTLTQS 130
++ A+P+TDEV+ ++ L P +L++++ ++ E+ SF KTLT S
Sbjct: 78 INIQRRAEPETDEVYAQITLLP------ELDQSEPTSPDAPVQEPEKCTVHSFCKTLTAS 131
Query: 131 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTT 190
D + GGFSV R A+ P LD S +PP Q ++A D+H W FRHI+RG PRRHLLTT
Sbjct: 132 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTT 191
Query: 191 GWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTMFG 250
GWS FV+ K+LVAGD+ +FLR EN +L V G + T
Sbjct: 192 GWSVFVSSKKLVAGDAFIFLRGENEELRV------------------GVRRHMRQQTNIP 233
Query: 251 SGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKASSV 310
S + + +G + G F V Y PR S EF V +
Sbjct: 234 SSVI--------SSHSMHIGVLA-----TAAHAITTGTIFSVFYKPRTSRSEFIVSVNRY 280
Query: 311 KASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWDEPD 370
+ + GMRFKM FE E++ F GTI V W DS WR L+V WDEP
Sbjct: 281 LEAKTQKLSVGMRFKMRFEGEEAPE-KRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPS 339
Query: 371 LLQNVKSVNPWLVE-LVSNMPTFNLSPFSPPRKKQR 405
+ + V+PW +E LV+N +P S P+ QR
Sbjct: 340 SVFRPERVSPWELEPLVANS-----TPSSQPQPPQR 370
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 194/404 (48%), Gaps = 55/404 (13%)
Query: 7 SMERTTERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEH--AHGGGKINFGQHRV-- 62
S R+ + L ++LW CAG +V++P +VFYFPQGH E A IN + V
Sbjct: 13 SSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFD 72
Query: 63 -PPLIPCRVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPS 121
PP I CRV + A+ +TDEV+ ++ L P E E + G E
Sbjct: 73 LPPKILCRVLDVTLKAEHETDEVYAQITLQP---EEDQSEPTSLDPPIVGPTKQEFH--- 126
Query: 122 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRG 181
SF K LT SD + GGFSV R A P LD + P Q ++ +D+HG W+F+HI+RG
Sbjct: 127 SFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRG 186
Query: 182 TPRRHLLTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNN 241
PRRHLLTTGWS FV+ KRLVAGD+ VFLR ENGDL V S
Sbjct: 187 QPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARH--------QSTMPT 238
Query: 242 NQVAPTMFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTP 301
+ ++ G L + + + F V Y PR S
Sbjct: 239 SVISSQSMHLGVLATASHAVRTTTIFV-----------------------VFYKPRIS-- 273
Query: 302 EFCVKASSVKASMQIQWCSGMRFKMPFETEDS-SRISWFMGTISSVSVAD-PIRWPDSPW 359
+F V + +++ + G RF+M FE E+S RI F GTI V D +WP S W
Sbjct: 274 QFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERI--FTGTI--VGSGDLSSQWPASKW 329
Query: 360 RLLQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKK 403
R LQV WDEP +Q V+PW +E P SP S P ++
Sbjct: 330 RSLQVQWDEPTTVQRPDKVSPWEIE-----PFLATSPISTPAQQ 368
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 190/391 (48%), Gaps = 61/391 (15%)
Query: 16 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHRVP-----PLIPCRV 70
L ++LW ACAG +V++P +VFYFPQGH E +P P I CRV
Sbjct: 18 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRV 77
Query: 71 SAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSSFAKTLTQS 130
++ A+ +TDEV+ ++ L P + ++++ ++ + SF K LT S
Sbjct: 78 LSVTLKAEHETDEVYAQITLQP------EEDQSEPTSLDPPLVEPAKPTVDSFVKILTAS 131
Query: 131 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTT 190
D + GGFSV R A P LD + P Q ++A+D+HG W+F+HI+RG PRRHLLTT
Sbjct: 132 DTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTT 191
Query: 191 GWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTMFG 250
GWS FV KRLVAGD+ VFLR E GDL V TM
Sbjct: 192 GWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQS-----------------TMPA 234
Query: 251 SGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKASSV 310
S + S++ R +G + F V Y PR S +F + +
Sbjct: 235 S--VISSQSMR-------LGVLATASHAVTTTTI-----FVVFYKPRIS--QFIISVNKY 278
Query: 311 KASMQIQWCSGMRFKMPFETEDS-SRISWFMGTISSVSVAD-PIRWPDSPWRLLQVVWDE 368
+M+ + GMR++M FE E+S RI F GTI + D +WP S WR LQ+ WDE
Sbjct: 279 MMAMKNGFSLGMRYRMRFEGEESPERI--FTGTI--IGSGDLSSQWPASKWRSLQIQWDE 334
Query: 369 PDLLQNVKSVNPWLVELVSNMPTFNLSPFSP 399
P +Q V+PW +E PFSP
Sbjct: 335 PSSIQRPNKVSPWEIE-----------PFSP 354
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 191/391 (48%), Gaps = 61/391 (15%)
Query: 16 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHA-----HGGGKINFGQHRVPPLIPCRV 70
L ++LW ACAG +V++P +VFYFPQGH E G +PP I CRV
Sbjct: 39 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRV 98
Query: 71 SAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSSFAKTLTQS 130
++ A+ +TDEV+ ++ L P + ++++ ++ + SF K LT S
Sbjct: 99 LSVTLKAEHETDEVYAQITLQP------EEDQSEPTSLDPPLVEPAKPTVDSFVKILTAS 152
Query: 131 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTT 190
D + GGFSV R A P LD + P Q ++A+D+HG W+F+HI+RG PRRHLLTT
Sbjct: 153 DTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTT 212
Query: 191 GWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTMFG 250
GWS FV KRLVAGD+ VFLR E GDL V TM
Sbjct: 213 GWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQS-----------------TMPA 255
Query: 251 SGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKASSV 310
S + S++ R +G + F V Y PR S +F + +
Sbjct: 256 S--VISSQSMR-------LGVLATASHAVTTTTI-----FVVFYKPRIS--QFIISVNKY 299
Query: 311 KASMQIQWCSGMRFKMPFETEDS-SRISWFMGTISSVSVAD-PIRWPDSPWRLLQVVWDE 368
+M+ + GMR++M FE E+S RI F GTI + D +WP S WR LQ+ WDE
Sbjct: 300 MMAMKNGFSLGMRYRMRFEGEESPERI--FTGTI--IGSGDLSSQWPASKWRSLQIQWDE 355
Query: 369 PDLLQNVKSVNPWLVELVSNMPTFNLSPFSP 399
P +Q V+PW +E PFSP
Sbjct: 356 PSSIQRPNKVSPWEIE-----------PFSP 375
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 183/376 (48%), Gaps = 49/376 (13%)
Query: 16 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGK-INFGQHR----VPPLIPCRV 70
L +LW CAG +V +P +V+YFPQGH E + ++ + +PP I C V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 71 SAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPS--SFAKTLT 128
+ A+ DTDEV+ ++ L P+ + D S E + P SF+K LT
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSP-------PELQRPKVHSFSKVLT 121
Query: 129 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLL 188
SD + GGFSV R A P LD + + P Q ++A+D+HG WKF+HI+RG PRRHLL
Sbjct: 122 ASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLL 181
Query: 189 TTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTM 248
TTGWS FV KRLVAGD+ VFLR ENG+L V L S ++ ++
Sbjct: 182 TTGWSTFVTSKRLVAGDTFVFLRGENGELRV--------GVRRANLQQSSMPSSVISSHS 233
Query: 249 FGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKAS 308
G L + + + F V Y PR S +F + +
Sbjct: 234 MHLGVLATARHATQTKTMFI-----------------------VYYKPRTS--QFIISLN 268
Query: 309 SVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWDE 368
+M ++ GMRFKM FE EDS + GT+ V P W DS WR L+V WDE
Sbjct: 269 KYLEAMSNKFSVGMRFKMRFEGEDSPERR-YSGTVIGVKDCSP-HWKDSKWRCLEVHWDE 326
Query: 369 PDLLQNVKSVNPWLVE 384
P + V+PW +E
Sbjct: 327 PASISRPNKVSPWEIE 342
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 183/376 (48%), Gaps = 49/376 (13%)
Query: 16 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGK-INFGQHR----VPPLIPCRV 70
L +LW CAG +V +P +V+YFPQGH E + ++ + +PP I C V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 71 SAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPS--SFAKTLT 128
+ A+ DTDEV+ ++ L P+ + D S E + P SF+K LT
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSP-------PELQRPKVHSFSKVLT 121
Query: 129 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLL 188
SD + GGFSV R A P LD + + P Q ++A+D+HG WKF+HI+RG PRRHLL
Sbjct: 122 ASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLL 181
Query: 189 TTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTM 248
TTGWS FV KRLVAGD+ VFLR ENG+L V L S ++ ++
Sbjct: 182 TTGWSTFVTSKRLVAGDTFVFLRGENGELRV--------GVRRANLQQSSMPSSVISSHS 233
Query: 249 FGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKAS 308
G L + + + F V Y PR S +F + +
Sbjct: 234 MHLGVLATARHATQTKTMFI-----------------------VYYKPRTS--QFIISLN 268
Query: 309 SVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWDE 368
+M ++ GMRFKM FE EDS + GT+ V P W DS WR L+V WDE
Sbjct: 269 KYLEAMSNKFSVGMRFKMRFEGEDSPERR-YSGTVIGVKDCSP-HWKDSKWRCLEVHWDE 326
Query: 369 PDLLQNVKSVNPWLVE 384
P + V+PW +E
Sbjct: 327 PASISRPNKVSPWEIE 342
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 128/208 (61%), Gaps = 8/208 (3%)
Query: 18 SQLWHACAGAMVQMPPLNTKVFYFPQGHAEH---AHGGGKINFGQHRVPPLIPCRVSAMK 74
S+LWHACAG + +P V YFPQGH E + + + P I CRV ++
Sbjct: 64 SELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSSPLEIPKFDLNPQIVCRVVNVQ 123
Query: 75 YMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGN-----NNSEEKVPSSFAKTLTQ 129
+A+ DTDEV+ ++ L PL+E + E LGG ++S ++ P F KTLT
Sbjct: 124 LLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKTLTA 183
Query: 130 SDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLT 189
SD + GGFSVPR AE F LDY + P Q +IAKD+HG WKFRHIYRG PRRHLLT
Sbjct: 184 SDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLT 243
Query: 190 TGWSNFVNHKRLVAGDSIVFLRAENGDL 217
TGWS FV+ K LV+GD+++FLR E G+L
Sbjct: 244 TGWSIFVSQKNLVSGDAVLFLRDEGGEL 271
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 290 FEVVYYPRASTPEFCVKASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVA 349
F V Y PRA+ EF + S++ C G RF+M FE +DS G ++ V
Sbjct: 312 FHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPE-RRCAGVVTGVCDL 370
Query: 350 DPIRWPDSPWRLLQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQ 404
DP RWP+S WR L V WDE + + + V+PW ++ ++P +LS S PR K+
Sbjct: 371 DPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLP--HLSIQSSPRPKR 423
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 131/211 (62%), Gaps = 11/211 (5%)
Query: 14 RCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEH--AHGGGKINF--GQHRVPPLIPCR 69
R ++S+LWHACAG ++ +PP + V YFPQGH+E A + +F +P + C
Sbjct: 19 RNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICM 78
Query: 70 VSAMKYMADPDTDEVFVKMRLTPLREHELD-LEENDCSNFLGGNNNSEEKVPSSFAKTLT 128
+ + ADP+TDEV+ +M L P+ +++ D L +D L N F KTLT
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNE------FFCKTLT 132
Query: 129 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLL 188
SD + GGFSVPR AE IFP LD+S +PP Q ++AKD+H W FRHIYRG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLL 192
Query: 189 TTGWSNFVNHKRLVAGDSIVFLRAENGDLCV 219
TTGWS FV+ KRL AGDS++F+R L +
Sbjct: 193 TTGWSVFVSTKRLFAGDSVLFIRDGKAQLLL 223
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 289 PFEVVYYPRASTP-EFCVKASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVS 347
PF + Y PR + P EF V + +M Q GMRF+M FETE+ + +MGT++ +S
Sbjct: 262 PFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGIS 320
Query: 348 VADPIRWPDSPWRLLQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPF 397
DP+RW +S WR LQ+ WDE V+ W +E V L+PF
Sbjct: 321 DLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPF 363
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 131/211 (62%), Gaps = 11/211 (5%)
Query: 14 RCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEH--AHGGGKINF--GQHRVPPLIPCR 69
R ++S+LWHACAG ++ +PP + V YFPQGH+E A + +F +P + C
Sbjct: 19 RNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICM 78
Query: 70 VSAMKYMADPDTDEVFVKMRLTPLREHELD-LEENDCSNFLGGNNNSEEKVPSSFAKTLT 128
+ + ADP+TDEV+ +M L P+ +++ D L +D L N F KTLT
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNE------FFCKTLT 132
Query: 129 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLL 188
SD + GGFSVPR AE IFP LD+S +PP Q ++AKD+H W FRHIYRG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLL 192
Query: 189 TTGWSNFVNHKRLVAGDSIVFLRAENGDLCV 219
TTGWS FV+ KRL AGDS++F+R L +
Sbjct: 193 TTGWSVFVSTKRLFAGDSVLFIRDGKAQLLL 223
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 289 PFEVVYYPRASTPEFCVKASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSV 348
PF + Y PRA+ EF V + +M Q GMRF+M FETE+ + +MGT++ +S
Sbjct: 262 PFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGISD 320
Query: 349 ADPIRWPDSPWRLLQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPF 397
DP+RW +S WR LQ+ WDE V+ W +E V L+PF
Sbjct: 321 LDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPF 362
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 131/211 (62%), Gaps = 11/211 (5%)
Query: 14 RCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEH--AHGGGKINF--GQHRVPPLIPCR 69
R ++S+LWHACAG ++ +PP + V YFPQGH+E A + +F +P + C
Sbjct: 19 RNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICM 78
Query: 70 VSAMKYMADPDTDEVFVKMRLTPLREHELD-LEENDCSNFLGGNNNSEEKVPSSFAKTLT 128
+ + ADP+TDEV+ +M L P+ +++ D L +D L N F KTLT
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPNE------FFCKTLT 132
Query: 129 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLL 188
SD + GGFSVPR AE IFP LD+S +PP Q ++AKD+H W FRHIYRG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLL 192
Query: 189 TTGWSNFVNHKRLVAGDSIVFLRAENGDLCV 219
TTGWS FV+ KRL AGDS++F+R L +
Sbjct: 193 TTGWSVFVSTKRLFAGDSVLFIRDGKAQLLL 223
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 289 PFEVVYYPRASTP-EFCVKASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVS 347
PF + Y PR + P EF V + +M Q GMRF+M FETE+ + +MGT++ +S
Sbjct: 262 PFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGIS 320
Query: 348 VADPIRWPDSPWRLLQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPF 397
DP+RW +S WR LQ+ WDE V+ W +E V L+PF
Sbjct: 321 DLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPF 363
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 182/392 (46%), Gaps = 46/392 (11%)
Query: 19 QLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHR----VPPLIPCRVSAMK 74
QLW CAG + +P L KV+YFPQG+ E + + + +P + CRV A+
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 75 YMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSSFAKTLTQSDANN 134
+ ++DE + K+ L P + + EN N N + +SF K LT SD +
Sbjct: 87 LKVENNSDETYAKITLMP----DTTVSENLQVVIPTQNENQFRPLVNSFTKVLTASDISA 142
Query: 135 GGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGWSN 194
G FSVP+ A P LD S P Q ++A D+HG W FRH YRGTP+RHLLTTGW+
Sbjct: 143 NGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNE 202
Query: 195 FVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTMFGSGFL 254
F K+LV GD IVF+R E G+L V ++ V+ G +
Sbjct: 203 FTTSKKLVKGDVIVFVRGETGELRVGIRRARHQ--------QGNIPSSIVSIDCMRHGVI 254
Query: 255 CKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKASSVKASM 314
+++ N F VVY PR+S +F V ++
Sbjct: 255 ASAKHAFDNQCMFI-----------------------VVYKPRSS--QFIVSYDKFLDAV 289
Query: 315 QIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWDEPDLLQN 374
++ G RF M FE +D S +F GTI VS P W S WR L+V WDE
Sbjct: 290 NNKFNVGSRFTMRFEGDDLSERRYF-GTIIGVSNFSP-HWKCSDWRSLEVQWDEFASFLR 347
Query: 375 VKSVNPWLVELVSNMPTFNLSPFSPPRKKQRL 406
V+PW +E + MP N+ P S K +RL
Sbjct: 348 PNKVSPWEIEHL--MPALNV-PRSSFLKNKRL 376
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 171/372 (45%), Gaps = 52/372 (13%)
Query: 19 QLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHR----VPPLIPCRVSAMK 74
QLW CAG + +P L KV+YFPQGH E + + + P + CRV A++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVIAIQ 86
Query: 75 YMADPDTDEVFVKMRLTPLREHELDLEENDCSNFL--GGNNNSEEKVPSSFAKTLTQSDA 132
+ ++DE + ++ L P D + + N N + +SF K LT SD
Sbjct: 87 LKVENNSDETYAEITLMP-----------DTTQVVIPTQNQNQFRPLVNSFTKVLTASDT 135
Query: 133 NNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGW 192
+ GGFSVP+ A P LD S P Q I+A D+HG W+FRHIYRGT +RHLLT GW
Sbjct: 136 SVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGW 195
Query: 193 SNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTMFGSG 252
+ F K+LV GD IVF+R E G+L V + +G + ++
Sbjct: 196 NAFTTSKKLVEGDVIVFVRGETGELRVG-------------IRRAGHQQGNIPSSIV--- 239
Query: 253 FLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKASSVKA 312
S + ++G N F VVY PR+S +F V
Sbjct: 240 ----SIESMRHG-----------IIASAKHAFDNQCMFIVVYKPRSS--QFIVSYDKFLD 282
Query: 313 SMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWDEPDLL 372
+ ++ G RF M FE +D S F GTI VS P W S WR L+V WDE
Sbjct: 283 VVNNKFNVGSRFTMRFEGDDFSERRSF-GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASF 340
Query: 373 QNVKSVNPWLVE 384
V+PW +E
Sbjct: 341 PRPNQVSPWDIE 352
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 181/394 (45%), Gaps = 55/394 (13%)
Query: 19 QLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHR----VPPLIPCRVSAMK 74
QLW CAG + +P L KV+YFPQGH E + + + +P + CRV A+
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVIAIH 86
Query: 75 YMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVP--SSFAKTLTQSDA 132
+ ++DE + ++ L P D + + N + P +SF K LT SD
Sbjct: 87 LKVENNSDETYAEITLMP-----------DTTQVVIPTQNENQFRPLVNSFTKVLTASDT 135
Query: 133 NNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGW 192
+ GGF VP+ A P LD S P Q ++A D+HG W+F H YRGTP+RHLLTTGW
Sbjct: 136 SAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGW 195
Query: 193 SNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTMFGSG 252
+ F K+LVAGD IVF+R E G+L V ++ V+ G
Sbjct: 196 NAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQ--------QGNIPSSIVSIDCMRHG 247
Query: 253 FLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKASSVKA 312
+ +++ N F + VY PR+S +F V
Sbjct: 248 VVASAKHAFDNQCMFTV-----------------------VYKPRSS--KFIVSYDKFLD 282
Query: 313 SMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWDEPDLL 372
++ ++ G RF M E +D S F GTI VS P W S WR L+V WDE
Sbjct: 283 AVNNKFNVGSRFTMRLEGDDFSERRCF-GTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSF 340
Query: 373 QNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQRL 406
K V+PW +E + MP N+ P S K +RL
Sbjct: 341 PGPKKVSPWDIEHL--MPAINV-PRSFLLKNKRL 371
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 182/394 (46%), Gaps = 55/394 (13%)
Query: 19 QLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHR----VPPLIPCRVSAMK 74
QLW CAG + +P L V+YFPQG+ E + + + +P + CRV A+
Sbjct: 27 QLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 75 YMADPDTDEVFVKMRLTPLREHELDLEENDCSNFL--GGNNNSEEKVPSSFAKTLTQSDA 132
+ ++DE++ ++ L P D + + + N + +SF K LT SD
Sbjct: 87 LKVENNSDEIYAEITLMP-----------DTTQVVIPTQSENRFRPLVNSFTKVLTASDT 135
Query: 133 NNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGW 192
+ GGFSVP+ A P LD S P Q I+A D+H W+FRH YRGTP+RH LTTGW
Sbjct: 136 SAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGW 195
Query: 193 SNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTMFGSG 252
+ F+ K+LV GD IVF+R E G+L V ++ V+ G
Sbjct: 196 NEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQ--------QGNIPSSIVSIDCMRHG 247
Query: 253 FLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKASSVKA 312
+ +++ N F VVY PR+S +F V
Sbjct: 248 VIASAKHAFDNQCIFI-----------------------VVYKPRSS--QFIVSYDKFLD 282
Query: 313 SMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWDEPDLL 372
++ ++ G RF M FE +D S +F GTI VS P W S WR L+V WDE
Sbjct: 283 AVNNKFNVGSRFTMRFEGDDFSERRYF-GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASF 340
Query: 373 QNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQRL 406
V+PW +E + +P N+ P S K +RL
Sbjct: 341 SRPNKVSPWEIEHL--VPALNV-PRSSLLKNKRL 371
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/394 (31%), Positives = 176/394 (44%), Gaps = 57/394 (14%)
Query: 19 QLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHR----VPPLIPCRVSAMK 74
QLW CAG + +P L V+YFPQG+ E + + + +P + CRV A+
Sbjct: 27 QLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 75 YMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVP--SSFAKTLTQSDA 132
+ ++DE + ++ L P D + + + + P +SF K LT SD
Sbjct: 87 LKVENNSDETYAEITLMP-----------DTTQVVIPTQSENQFRPLVNSFTKVLTASDT 135
Query: 133 NNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGW 192
+ GGF VP+ A P L P Q ++AKD+HG W+FRH YRGTP+RH LTTGW
Sbjct: 136 SAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGW 191
Query: 193 SNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNNNQVAPTMFGSG 252
+ F K+LV GD IVF+R E G+L V ++ V+ G
Sbjct: 192 NEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQ--------QGNIPSSIVSIDCMRHG 243
Query: 253 FLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKASSVKA 312
+ +++ N F VVY P + +F V
Sbjct: 244 VIASAKHALDNQCIFI-----------------------VVYKPSIRSSQFIVSYDKFLD 280
Query: 313 SMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVADPIRWPDSPWRLLQVVWDEPDLL 372
+M ++ G RF M FE +D S +F GTI V+ P W S WR L+V WDE
Sbjct: 281 AMNNKFIVGSRFTMRFEGDDFSERRYF-GTIIGVNDFSP-HWKCSEWRSLEVQWDEFASF 338
Query: 373 QNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQRL 406
V+PW +E + M N+ P S K +RL
Sbjct: 339 SRPNKVSPWEIEHL--MSALNV-PRSSLLKNKRL 369
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 137/280 (48%), Gaps = 50/280 (17%)
Query: 122 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRG 181
SF K LT SD + GGFSV R A P LD + P Q ++A+D+HG W+F+HI+RG
Sbjct: 36 SFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRG 95
Query: 182 TPRRHLLTTGWSNFVNHKRLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXTELFSSGWNN 241
PRRHLLTTGWS FV KRLVAGD+ VFLR E GDL V
Sbjct: 96 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQS------------ 143
Query: 242 NQVAPTMFGSGFLCKSENNRKNGDEFFMGRVTGXXXXXXXXXXXNGRPFEVVYYPRASTP 301
TM S + S++ R +G + F V Y PR S
Sbjct: 144 -----TMPAS--VISSQSMR-------LGVLATASHAVTTTTI-----FVVFYKPRIS-- 182
Query: 302 EFCVKASSVKASMQIQWCSGMRFKMPFETEDS-SRISWFMGTISSVSVAD-PIRWPDSPW 359
+F + + +M+ + GMR++M FE E+S RI F GTI + D +WP S W
Sbjct: 183 QFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERI--FTGTI--IGSGDLSSQWPASKW 238
Query: 360 RLLQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSP 399
R LQ+ WDEP +Q V+PW +E PFSP
Sbjct: 239 RSLQIQWDEPSSIQRPNKVSPWEIE-----------PFSP 267
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 114/207 (55%), Gaps = 19/207 (9%)
Query: 19 QLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHR----VPPLIPCRVSAMK 74
QLW CAG + +P L K++YFPQG+ E + + + +P + CRV A++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVIAIQ 86
Query: 75 YMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVP--SSFAKTLTQSDA 132
+ ++DE + ++ L P D + + N + P +SF K LT SD
Sbjct: 87 LKVENNSDETYAEITLMP-----------DTTQVVIPTQNENQFRPLVNSFTKVLTASDT 135
Query: 133 NNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGW 192
+ GGF VP+ A P LD S P Q ++A D+HG W+F H YRGTP+RHLLTTGW
Sbjct: 136 S--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGW 193
Query: 193 SNFVNHKRLVAGDSIVFLRAENGDLCV 219
+ F K+LVAGD IVF+R E G+L V
Sbjct: 194 NAFTTSKKLVAGDVIVFVRGETGELRV 220
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 290 FEVVYYPRASTPEFCVKASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVA 349
F VVY PR+S +F V ++ ++ G RF M FE +D S +F GTI VS
Sbjct: 260 FIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYF-GTIIGVSDF 316
Query: 350 DPIRWPDSPWRLLQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQRL 406
P W S WR L+V WDE V+PW +E + MP N+ P K +RL
Sbjct: 317 SP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL--MPALNV-PRPSLLKNKRL 369
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 114/214 (53%), Gaps = 19/214 (8%)
Query: 12 TERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHR----VPPLIP 67
T+ + +LW+ CAG + +P KV+YFPQGH E + R +P +
Sbjct: 18 TKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLR 77
Query: 68 CRVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSS--FAK 125
CRV A+ D +TDEV+ ++ L P D + + N + + P F+K
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMP-----------DTTEVMTHNTTMDTRRPIVYFFSK 126
Query: 126 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRR 185
LT SD + GG +P+ A FP LD S Q ++AKD++GQ W F+H++RGTP+R
Sbjct: 127 ILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQR 186
Query: 186 HLLTT--GWSNFVNHKRLVAGDSIVFLRAENGDL 217
H+ T+ GWS F KRL+ GD V LR ENG+L
Sbjct: 187 HMFTSGGGWSVFATTKRLIVGDIFVLLRGENGEL 220
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 290 FEVVYYPRASTPEFCVKASSVKASMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVSVA 349
F VVY P +S +F + +M + G RF+M FE +D S + GTI V+
Sbjct: 262 FNVVYKPSSS--QFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSE-KRYDGTIIGVNDM 318
Query: 350 DPIRWPDSPWRLLQVVWDEPDLLQNVKSVNPWLVELVSNMPTFNLSPFSPPRKKQRL 406
P W DS WR L+V WDE V+PW +E + +P+ ++S S +KK L
Sbjct: 319 SP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL--IPSSDISQSSLKKKKHWL 372
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 114/214 (53%), Gaps = 19/214 (8%)
Query: 12 TERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHR----VPPLIP 67
T+ + +LW+ CAG + +P KV+YFPQGH E + R +P +
Sbjct: 18 TKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLR 77
Query: 68 CRVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSS--FAK 125
CRV A+ D +TDEV+ ++ L P D + + N + + P F+K
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMP-----------DTTEVMTHNTTMDTRRPIVYFFSK 126
Query: 126 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRR 185
LT SD + GG +P+ A FP LD S Q ++AKD++GQ W F+H++RGTP+R
Sbjct: 127 ILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQR 186
Query: 186 HLLTT--GWSNFVNHKRLVAGDSIVFLRAENGDL 217
H+ T+ GWS F KRL+ GD V LR ENG+L
Sbjct: 187 HMFTSGGGWSVFATTKRLIVGDIFVLLRGENGEL 220
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 114/214 (53%), Gaps = 19/214 (8%)
Query: 12 TERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHR----VPPLIP 67
T+ + +LW+ CAG + +P KV+YFPQGH E + R +P +
Sbjct: 18 TKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLR 77
Query: 68 CRVSAMKYMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSS--FAK 125
CRV A+ D +TDEV+ ++ L P D + + N + + P F+K
Sbjct: 78 CRVVAIDRKVDKNTDEVYAQISLMP-----------DTTEVMTHNTTMDTRRPIVYFFSK 126
Query: 126 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRR 185
LT SD + GG +P+ A FP LD S Q ++AKD++GQ W F+H++RGTP+R
Sbjct: 127 ILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQR 186
Query: 186 HLLTT--GWSNFVNHKRLVAGDSIVFLRAENGDL 217
H+ T+ GWS F KRL+ GD V LR ENG+L
Sbjct: 187 HMFTSGGGWSVFATTKRLIVGDIFVLLRGENGEL 220
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 19 QLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGGGKINFGQHR----VPPLIPCRVSAMK 74
QLW CAG + +P L KV+YFPQGH E + + + +P + CRV A+
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVIAIH 86
Query: 75 YMADPDTDEVFVKMRLTPLREHELDLEENDCSNFLGGNNNSEEKVPSSFAKTLTQSDANN 134
+ ++DE +V++ L P + EN+ N + +SF K LT SD +
Sbjct: 87 LKVENNSDETYVEITLMPDTTQVVIPTENE---------NQFRPIVNSFTKVLTASDTSA 137
Query: 135 GGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGWSN 194
G FSVP A P LD S P Q +IA D+HG W+F+H YR PR TTGW+
Sbjct: 138 QGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNA 194
Query: 195 FVNHKRLVAGDSIVFLRAENGDLCV 219
F K+LV GD IVF R E G+L V
Sbjct: 195 FTTSKKLVVGDVIVFARGETGELRV 219
>ATMG00940.1 | Symbols: ORF164 | DNA binding | chrM:251403-251897
REVERSE LENGTH=164
Length = 164
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/90 (46%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 270 GRVTGXXXXXXXXXXXNGRPFEVVYYPRASTPEFCVKASSVKASMQIQWCSGMRFKMPFE 329
G++T G PFEVVYYP A +F VKA V+ASM I W G R KM E
Sbjct: 60 GKLTAEAVSEAINRAAQGLPFEVVYYPTAGWSDFVVKAEDVEASMAIFWTPGTRVKMAME 119
Query: 330 TEDSSRISWFMGTISSVSVADPIRWPDSPW 359
TEDSSRI+WF G I + + W SPW
Sbjct: 120 TEDSSRITWFQG-IVFYTYQETGPWRGSPW 148
>AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding factor
3 | chr3:9396505-9397506 FORWARD LENGTH=333
Length = 333
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 123 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIA--KDMHGQCWKFRHIYR 180
F KT+T SD +P++ AE FP + V+ ++ +D++G+ W+FR+ Y
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 181 GTPRRHLLTTGWSNFVNHKRLVAGDSIVFLRAENGD 216
+ + ++LT GWS FV KRL AGD I F R+ + D
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQD 278
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 97 ELDLEENDCSNFLGGNNNSEEKVPSSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSA 156
E+ +D +N+ S E+ F K LT SD +P+ AE FP D
Sbjct: 14 EIRASSSDHTNYF----YSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQN 69
Query: 157 EPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGWSNFVNHKRLVAGDSIVFLRA 212
+ +D +G+ W+FR+ Y + + +++T GWS FV K+L AGD++ F R
Sbjct: 70 G---TVLDFQDKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor
family protein | chr2:19261313-19262245 FORWARD
LENGTH=310
Length = 310
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 123 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGT 182
F K +T SD +P+ AE FP LD S+ + +D+ G+ W+FR+ Y +
Sbjct: 35 FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 93
Query: 183 PRRHLLTTGWSNFVNHKRLVAGDSIVFLR 211
+ +++T GWS FV K+L AGD + F R
Sbjct: 94 SQSYVMTKGWSRFVKDKKLDAGDIVSFQR 122
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 123 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGT 182
F K +T SD +P++ AE FP + + +D++G+ W+FR+ Y +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 183 PRRHLLTTGWSNFVNHKRLVAGDSIVFLRAENGD 216
+ ++LT GWS FV K L AGD + F R+ D
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQD 281
>AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor
family protein | chr1:11864-12940 REVERSE LENGTH=358
Length = 358
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 123 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGT 182
F K +T SD +P+ AE FP LD S + +D +G+ W+FR+ Y +
Sbjct: 56 FDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRYSYWNS 114
Query: 183 PRRHLLTTGWSNFVNHKRLVAGDSIVFLRA 212
+ +++T GWS FV K+L AGD + F R
Sbjct: 115 SQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>AT3G11580.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3650579-3651271 REVERSE LENGTH=230
Length = 230
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 112 NNNSEEKVPSSFAKTLTQSDANNGGGFSVPRYCAETIFPRL----------DYSAEPPVQ 161
N+ + + S F K+LT SD +P+ AE FP D +
Sbjct: 18 NDVAIAQRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGM 77
Query: 162 TIIAKDMHGQCWKFRHIYRGTPRRHLLTTGWSNFVNHKRLVAGDSIVFLR 211
+ +D G+CWKFR+ Y + + ++LT GWS +V K L AGD + F R
Sbjct: 78 LLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQR 127
>AT3G11580.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr3:3649165-3651271 REVERSE LENGTH=267
Length = 267
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 121 SSFAKTLTQSDANNGGGFSVPRYCAETIFPRL----------DYSAEPPVQTIIAKDMHG 170
S F K+LT SD +P+ AE FP D + + +D G
Sbjct: 27 SLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESG 86
Query: 171 QCWKFRHIYRGTPRRHLLTTGWSNFVNHKRLVAGDSIVFLR 211
+CWKFR+ Y + + ++LT GWS +V K L AGD + F R
Sbjct: 87 KCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQR 127
>AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 |
chr1:25880442-25881500 FORWARD LENGTH=352
Length = 352
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 123 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIA-KDMHGQCWKFRHIYRG 181
F K +T SD +P+ AE FP S +I +D++G+ W+FR+ Y
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWN 247
Query: 182 TPRRHLLTTGWSNFVNHKRLVAGDSIVFLRA 212
+ + ++LT GWS FV K L AGD + F R+
Sbjct: 248 SSQSYVLTKGWSRFVKEKNLRAGDVVTFERS 278
>AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | related
to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD
LENGTH=352
Length = 352
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 123 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIA-KDMHGQCWKFRHIYRG 181
F K +T SD +P+ AE FP S +I +D++G+ W+FR+ Y
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWN 247
Query: 182 TPRRHLLTTGWSNFVNHKRLVAGDSIVFLRA 212
+ + ++LT GWS FV K L AGD + F R+
Sbjct: 248 SSQSYVLTKGWSRFVKEKNLRAGDVVTFERS 278
>AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor
family protein | chr1:8981891-8982976 REVERSE LENGTH=361
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 123 FAKTLTQSDANNGGGFSVPRYCAETIFP------RLDYSAEPPVQTII-AKDMHGQCWKF 175
F KT+T SD +P+ AE FP + + P +I +D G+ W+F
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254
Query: 176 RHIYRGTPRRHLLTTGWSNFVNHKRLVAGDSIVFLRAENGD 216
R+ Y + + ++LT GWS FV K L AGD + F R+ D
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPD 295
>AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15148612-15151411 REVERSE LENGTH=244
Length = 244
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 113 NNSEEKVPSSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIA--KDMHG 170
N+ E+ + F K LT SD +P+ AE FP +A+ + ++ +D G
Sbjct: 28 NDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEG 87
Query: 171 QCWKFRHIYRGTPRRHLLTTGWSNFVNHKRLVAGDSIVFLR 211
+ W+FR+ Y + + ++LT GWS +V K L AGD ++F R
Sbjct: 88 KPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHR 128
>AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15150890-15151411 REVERSE LENGTH=173
Length = 173
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 113 NNSEEKVPSSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIA--KDMHG 170
N+ E+ + F K LT SD +P+ AE FP +A+ + ++ +D G
Sbjct: 28 NDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEG 87
Query: 171 QCWKFRHIYRGTPRRHLLTTGWSNFVNHKRLVAGDSIVFLR 211
+ W+FR+ Y + + ++LT GWS +V K L AGD ++F R
Sbjct: 88 KPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHR 128
>AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor
family protein | chr3:22951829-22952728 FORWARD
LENGTH=299
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 123 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIA--KDMHGQCWKFRHIYR 180
F K +T SD +P+ AE FP + + + ++ +D G W+FR+ Y
Sbjct: 23 FDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRFRYSYW 82
Query: 181 GTPRRHLLTTGWSNFVNHKRLVAGDSIVFLR 211
+ + +++T GWS FV K+L AGD + F R
Sbjct: 83 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113
>AT5G06250.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=267
Length = 267
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 121 SSFAKTLTQSDANNGGGFSVPRYCAETIFP---------RLDYSAEPPVQTIIAKDMHGQ 171
S F K+LT SD +P+ AE FP D S+ + +D G+
Sbjct: 44 SLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGK 103
Query: 172 CWKFRHIYRGTPRRHLLTTGWSNFVNHKRLVAGDSIVFLR 211
W+FR+ Y + + ++LT GWS FV K+L GD + F R
Sbjct: 104 SWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQR 143
>AT5G06250.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr5:1892714-1894058 REVERSE LENGTH=282
Length = 282
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 121 SSFAKTLTQSDANNGGGFSVPRYCAETIFP---------RLDYSAEPPVQTIIAKDMHGQ 171
S F K+LT SD +P+ AE FP D S+ + +D G+
Sbjct: 44 SLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGK 103
Query: 172 CWKFRHIYRGTPRRHLLTTGWSNFVNHKRLVAGDSIVFLR 211
W+FR+ Y + + ++LT GWS FV K+L GD + F R
Sbjct: 104 SWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQR 143