Miyakogusa Predicted Gene
- Lj5g3v1811810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1811810.1 tr|B9DI18|B9DI18_ARATH AT3G54810 protein
OS=Arabidopsis thaliana GN=AT3G54810 PE=2
SV=1,41.18,0.0000000000005,GATA_ZN_FINGER_2,Zinc finger, GATA-type;
ZINC FINGER (GATA TYPE) FAMILY PROTEIN,NULL; TRANSCRIPTION
,CUFF.55985.1
(351 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54810.1 | Symbols: BME3-ZF, BME3, GATA8 | Plant-specific GAT... 145 5e-35
AT3G54810.2 | Symbols: BME3-ZF, BME3, GATA8 | Plant-specific GAT... 145 5e-35
AT5G25830.1 | Symbols: GATA12 | GATA transcription factor 12 | c... 132 3e-31
AT1G08010.2 | Symbols: GATA11 | GATA transcription factor 11 | c... 130 1e-30
AT1G08010.1 | Symbols: GATA11 | GATA transcription factor 11 | c... 130 1e-30
AT5G66320.2 | Symbols: GATA5 | GATA transcription factor 5 | chr... 125 3e-29
AT5G66320.1 | Symbols: GATA5 | GATA transcription factor 5 | chr... 125 3e-29
AT4G32890.1 | Symbols: GATA9 | GATA transcription factor 9 | chr... 125 6e-29
AT1G08000.2 | Symbols: GATA10 | GATA transcription factor 10 | c... 122 3e-28
AT1G08000.1 | Symbols: GATA10 | GATA transcription factor 10 | c... 122 3e-28
AT3G51080.1 | Symbols: GATA6 | GATA transcription factor 6 | chr... 121 7e-28
AT3G24050.1 | Symbols: GATA1 | GATA transcription factor 1 | chr... 118 5e-27
AT3G60530.1 | Symbols: GATA4 | GATA transcription factor 4 | chr... 115 3e-26
AT2G45050.1 | Symbols: GATA2 | GATA transcription factor 2 | chr... 115 4e-26
AT4G36240.1 | Symbols: GATA7 | GATA transcription factor 7 | chr... 114 8e-26
AT2G28340.1 | Symbols: GATA13 | GATA transcription factor 13 | c... 114 1e-25
AT4G34680.2 | Symbols: GATA3 | GATA transcription factor 3 | chr... 112 5e-25
AT4G34680.1 | Symbols: GATA3 | GATA transcription factor 3 | chr... 112 5e-25
AT3G45170.1 | Symbols: GATA14 | GATA transcription factor 14 | c... 101 7e-22
AT4G26150.1 | Symbols: CGA1, GATA22, GNL | cytokinin-responsive ... 60 2e-09
AT5G56860.1 | Symbols: GNC, GATA21 | GATA type zinc finger trans... 59 4e-09
AT4G36620.1 | Symbols: GATA19 | GATA transcription factor 19 | c... 59 4e-09
AT2G18380.1 | Symbols: GATA20 | GATA transcription factor 20 | c... 59 5e-09
AT5G26930.1 | Symbols: GATA23 | GATA transcription factor 23 | c... 59 5e-09
AT3G50870.1 | Symbols: MNP, HAN, GATA18 | GATA type zinc finger ... 58 8e-09
AT5G49300.1 | Symbols: GATA16 | GATA transcription factor 16 | c... 55 9e-08
AT3G06740.1 | Symbols: GATA15 | GATA transcription factor 15 | c... 54 2e-07
AT3G20750.1 | Symbols: GATA29 | GATA transcription factor 29 | c... 53 2e-07
AT3G16870.1 | Symbols: GATA17 | GATA transcription factor 17 | c... 52 6e-07
AT4G16141.1 | Symbols: | GATA type zinc finger transcription fa... 52 6e-07
AT4G17570.1 | Symbols: GATA26 | GATA transcription factor 26 | c... 49 6e-06
AT4G17570.3 | Symbols: GATA26 | GATA transcription factor 26 | c... 49 7e-06
AT4G24470.3 | Symbols: TIFY1 | GATA-type zinc finger protein wit... 48 9e-06
AT4G24470.2 | Symbols: ZIM, GATA25 | GATA-type zinc finger prote... 48 9e-06
AT4G24470.1 | Symbols: ZIM, TIFY1, GATA25 | GATA-type zinc finge... 48 9e-06
>AT3G54810.1 | Symbols: BME3-ZF, BME3, GATA8 | Plant-specific
GATA-type zinc finger transcription factor family
protein | chr3:20296957-20298236 FORWARD LENGTH=322
Length = 322
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 72/82 (87%), Gaps = 3/82 (3%)
Query: 247 DGNNIQNGSQ---PVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAA 303
+GNN+ + S P+RKCMHCE+TKTPQWR GPMGPKTLCNACGVRYKSGRLFPEYRPAA
Sbjct: 214 NGNNVDSYSSEQYPLRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAA 273
Query: 304 SPTFCPAVHSNSHKKVLEMRCK 325
SPTF PA+HSNSHKKV EMR K
Sbjct: 274 SPTFTPALHSNSHKKVAEMRNK 295
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 9/101 (8%)
Query: 1 MVGPNFMDELDCGSFFDHIDDLLDFPVEDVDGXXXXXXXXXXXXXXXXXXXXIWPPETDS 60
M+G +F ++LDCG+FFD++DDL+DFP D+D IW D+
Sbjct: 1 MIGTSFPEDLDCGNFFDNMDDLMDFPGGDID--------VGFGIGDSDSFPTIWTTHHDT 52
Query: 61 FP-GSDSVFSGNSGSDLSAGLSVPYEDIVQLEWLSNFVEDS 100
+P SD +FS N+ SD S L VP+EDIV++E +FVE++
Sbjct: 53 WPAASDPLFSSNTNSDSSPELYVPFEDIVKVERPPSFVEET 93
>AT3G54810.2 | Symbols: BME3-ZF, BME3, GATA8 | Plant-specific
GATA-type zinc finger transcription factor family
protein | chr3:20296957-20298236 FORWARD LENGTH=322
Length = 322
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 72/82 (87%), Gaps = 3/82 (3%)
Query: 247 DGNNIQNGSQ---PVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAA 303
+GNN+ + S P+RKCMHCE+TKTPQWR GPMGPKTLCNACGVRYKSGRLFPEYRPAA
Sbjct: 214 NGNNVDSYSSEQYPLRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAA 273
Query: 304 SPTFCPAVHSNSHKKVLEMRCK 325
SPTF PA+HSNSHKKV EMR K
Sbjct: 274 SPTFTPALHSNSHKKVAEMRNK 295
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 9/101 (8%)
Query: 1 MVGPNFMDELDCGSFFDHIDDLLDFPVEDVDGXXXXXXXXXXXXXXXXXXXXIWPPETDS 60
M+G +F ++LDCG+FFD++DDL+DFP D+D IW D+
Sbjct: 1 MIGTSFPEDLDCGNFFDNMDDLMDFPGGDID--------VGFGIGDSDSFPTIWTTHHDT 52
Query: 61 FP-GSDSVFSGNSGSDLSAGLSVPYEDIVQLEWLSNFVEDS 100
+P SD +FS N+ SD S L VP+EDIV++E +FVE++
Sbjct: 53 WPAASDPLFSSNTNSDSSPELYVPFEDIVKVERPPSFVEET 93
>AT5G25830.1 | Symbols: GATA12 | GATA transcription factor 12 |
chr5:9004398-9005502 REVERSE LENGTH=331
Length = 331
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 37/258 (14%)
Query: 73 GSDLSAGLSVPYEDIV-QLEWLSNFVEDSYGGSLTMKKVEHQQPSSTITTKEDSVHNQFQ 131
G+ S L +P +D+ +LEWLSN V++S L+ + V + S ++ D +
Sbjct: 64 GTSFSGDLCIPSDDLADELEWLSNIVDES----LSPEDVHKLELISGFKSRPDPKSDTGS 119
Query: 132 TXXXXXXXXXXXXXXGGKPAEIYIPVPCGRARSKRPRPASFN--PRSAMQLISPASSFIG 189
++ +P +ARSKR R A+ N R ++ S F G
Sbjct: 120 PENPNSSSPIFT-------TDVSVP---AKARSKRSRAAACNWASRGLLKETFYDSPFTG 169
Query: 190 ENNTMKPNYHHHVRTSSDSENFAESQPVITKMMMPKQASGEPXXXXXXXVPLPLAPSDGN 249
E + +S + S P++ + KQA D +
Sbjct: 170 ET----------ILSSQQHLSPPTSPPLLMAPLGKKQAVDGGHRRK----------KDVS 209
Query: 250 NIQNGSQPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCP 309
+ ++G R+C+HC KTPQWR GPMGPKTLCNACGVRYKSGRL PEYRPAASPTF
Sbjct: 210 SPESGGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVL 269
Query: 310 AVHSNSHKKVLEMRCKGE 327
A HSNSH+KV+E+R + E
Sbjct: 270 AKHSNSHRKVMELRRQKE 287
>AT1G08010.2 | Symbols: GATA11 | GATA transcription factor 11 |
chr1:2486202-2487402 REVERSE LENGTH=303
Length = 303
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 63/71 (88%)
Query: 258 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHK 317
VRKC HCE TKTPQWR GP GPKTLCNACGVR++SGRL PEYRPA+SPTF PAVHSNSH+
Sbjct: 219 VRKCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHR 278
Query: 318 KVLEMRCKGED 328
K++EMR K ++
Sbjct: 279 KIIEMRRKDDE 289
>AT1G08010.1 | Symbols: GATA11 | GATA transcription factor 11 |
chr1:2486202-2487402 REVERSE LENGTH=303
Length = 303
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 63/71 (88%)
Query: 258 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHK 317
VRKC HCE TKTPQWR GP GPKTLCNACGVR++SGRL PEYRPA+SPTF PAVHSNSH+
Sbjct: 219 VRKCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHR 278
Query: 318 KVLEMRCKGED 328
K++EMR K ++
Sbjct: 279 KIIEMRRKDDE 289
>AT5G66320.2 | Symbols: GATA5 | GATA transcription factor 5 |
chr5:26496208-26497309 REVERSE LENGTH=339
Length = 339
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 59/72 (81%)
Query: 256 QPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNS 315
QP RKC HC + KTPQWRAGPMG KTLCNACGVRYKSGRL PEYRPA SPTF +HSN
Sbjct: 246 QPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNH 305
Query: 316 HKKVLEMRCKGE 327
H+KV+EMR K E
Sbjct: 306 HRKVIEMRRKKE 317
>AT5G66320.1 | Symbols: GATA5 | GATA transcription factor 5 |
chr5:26496208-26497309 REVERSE LENGTH=339
Length = 339
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 59/72 (81%)
Query: 256 QPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNS 315
QP RKC HC + KTPQWRAGPMG KTLCNACGVRYKSGRL PEYRPA SPTF +HSN
Sbjct: 246 QPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNH 305
Query: 316 HKKVLEMRCKGE 327
H+KV+EMR K E
Sbjct: 306 HRKVIEMRRKKE 317
>AT4G32890.1 | Symbols: GATA9 | GATA transcription factor 9 |
chr4:15875598-15876615 FORWARD LENGTH=308
Length = 308
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 59/69 (85%)
Query: 259 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHKK 318
R+C+HC KTPQWR GPMGPKTLCNACGVRYKSGRL PEYRPA+SPTF A HSNSH+K
Sbjct: 197 RRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVMARHSNSHRK 256
Query: 319 VLEMRCKGE 327
V+E+R + E
Sbjct: 257 VMELRRQKE 265
>AT1G08000.2 | Symbols: GATA10 | GATA transcription factor 10 |
chr1:2483460-2484564 REVERSE LENGTH=308
Length = 308
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 60/71 (84%)
Query: 258 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHK 317
VR C HCE TPQWR GP GPKTLCNACGVR+KSGRL PEYRPA+SPTF P+VHSNSH+
Sbjct: 217 VRICTHCETITTPQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPASSPTFIPSVHSNSHR 276
Query: 318 KVLEMRCKGED 328
K++EMR K ++
Sbjct: 277 KIIEMRKKDDE 287
>AT1G08000.1 | Symbols: GATA10 | GATA transcription factor 10 |
chr1:2483460-2484564 REVERSE LENGTH=308
Length = 308
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 60/71 (84%)
Query: 258 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHK 317
VR C HCE TPQWR GP GPKTLCNACGVR+KSGRL PEYRPA+SPTF P+VHSNSH+
Sbjct: 217 VRICTHCETITTPQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPASSPTFIPSVHSNSHR 276
Query: 318 KVLEMRCKGED 328
K++EMR K ++
Sbjct: 277 KIIEMRKKDDE 287
>AT3G51080.1 | Symbols: GATA6 | GATA transcription factor 6 |
chr3:18973639-18974668 FORWARD LENGTH=312
Length = 312
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 61/79 (77%)
Query: 259 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHKK 318
R+C HC + KTPQWRAGP+G KTLCNACGVRYKSGRL PEYRPA SPTF +HSN H K
Sbjct: 221 RQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSK 280
Query: 319 VLEMRCKGEDSGLADQPEL 337
V+EMR K E S A++ L
Sbjct: 281 VIEMRRKKETSDGAEETGL 299
>AT3G24050.1 | Symbols: GATA1 | GATA transcription factor 1 |
chr3:8686060-8687462 FORWARD LENGTH=274
Length = 274
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 259 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHKK 318
RKC HC KTPQWRAGP GPKTLCNACGVRYKSGRL PEYRPA SPTF +HSNSH+K
Sbjct: 194 RKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRK 253
Query: 319 VLEMRCKGEDSGLAD 333
++EMR K SG D
Sbjct: 254 IVEMR-KQYQSGDGD 267
>AT3G60530.1 | Symbols: GATA4 | GATA transcription factor 4 |
chr3:22373348-22374147 FORWARD LENGTH=240
Length = 240
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 57/70 (81%)
Query: 258 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHK 317
R+C HC KTPQWR GP+GPKTLCNACGVRYKSGRL PEYRPA+SPTF HSNSH+
Sbjct: 157 ARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHSNSHR 216
Query: 318 KVLEMRCKGE 327
KV+E+R + E
Sbjct: 217 KVMELRRQKE 226
>AT2G45050.1 | Symbols: GATA2 | GATA transcription factor 2 |
chr2:18582958-18583845 FORWARD LENGTH=264
Length = 264
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 258 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHK 317
+R+C HC KTPQWR GP+GPKTLCNACGVR+KSGRL PEYRPA+SPTF HSNSH+
Sbjct: 178 MRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVLTQHSNSHR 237
Query: 318 KVLEMRCKGEDSGLADQPELI 338
KV+E+R + E + QP+ +
Sbjct: 238 KVMELRRQKE---VMRQPQQV 255
>AT4G36240.1 | Symbols: GATA7 | GATA transcription factor 7 |
chr4:17147376-17148211 REVERSE LENGTH=238
Length = 238
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 246 SDGNNIQNGSQPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASP 305
S G +Q Q R C HC + KTPQWR GP+G KTLCNACGVR+KSGRL PEYRPA SP
Sbjct: 152 SYGGVVQQ-QQLRRCCSHCGVQKTPQWRMGPLGAKTLCNACGVRFKSGRLLPEYRPACSP 210
Query: 306 TFCPAVHSNSHKKVLEMR 323
TF +HSNSH+KVLE+R
Sbjct: 211 TFTNEIHSNSHRKVLELR 228
>AT2G28340.1 | Symbols: GATA13 | GATA transcription factor 13 |
chr2:12103672-12106172 FORWARD LENGTH=291
Length = 291
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 53/68 (77%)
Query: 261 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHKKVL 320
C HCE T TPQWR GP G KTLCNACG+R++SGRL EYRPAASPTF P VHSN HKK++
Sbjct: 193 CTHCETTTTPQWREGPNGRKTLCNACGIRFRSGRLVLEYRPAASPTFIPTVHSNLHKKII 252
Query: 321 EMRCKGED 328
MR K D
Sbjct: 253 YMRMKDND 260
>AT4G34680.2 | Symbols: GATA3 | GATA transcription factor 3 |
chr4:16553700-16554610 FORWARD LENGTH=269
Length = 269
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Query: 259 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHKK 318
R+C HC TPQWR GP+GPKTLCNACGVR+KSGRL PEYRPA SPTF +HSN H+K
Sbjct: 180 RRCSHCGTNNTPQWRTGPVGPKTLCNACGVRFKSGRLCPEYRPADSPTFSNEIHSNLHRK 239
Query: 319 VLEMRCK---GEDSGLA 332
VLE+R GE++G A
Sbjct: 240 VLELRKSKELGEETGEA 256
>AT4G34680.1 | Symbols: GATA3 | GATA transcription factor 3 |
chr4:16553700-16554610 FORWARD LENGTH=269
Length = 269
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Query: 259 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHKK 318
R+C HC TPQWR GP+GPKTLCNACGVR+KSGRL PEYRPA SPTF +HSN H+K
Sbjct: 180 RRCSHCGTNNTPQWRTGPVGPKTLCNACGVRFKSGRLCPEYRPADSPTFSNEIHSNLHRK 239
Query: 319 VLEMRCK---GEDSGLA 332
VLE+R GE++G A
Sbjct: 240 VLELRKSKELGEETGEA 256
>AT3G45170.1 | Symbols: GATA14 | GATA transcription factor 14 |
chr3:16537538-16538232 FORWARD LENGTH=204
Length = 204
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 50/65 (76%)
Query: 259 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHKK 318
+ C HC KTP WR GP G TLCNACG+RY++GRL PEYRPA+SP F P VHSN H+K
Sbjct: 115 KSCSHCGTRKTPLWREGPRGAGTLCNACGMRYRTGRLLPEYRPASSPDFKPNVHSNFHRK 174
Query: 319 VLEMR 323
V+E+R
Sbjct: 175 VMEIR 179
>AT4G26150.1 | Symbols: CGA1, GATA22, GNL | cytokinin-responsive
gata factor 1 | chr4:13253210-13254659 FORWARD
LENGTH=352
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 243 LAPSDGNNIQNGSQPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVR 289
L+ S+ N N +R C C TKTP WR+GP GPK+LCNACG+R
Sbjct: 183 LSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIR 229
>AT5G56860.1 | Symbols: GNC, GATA21 | GATA type zinc finger
transcription factor family protein |
chr5:22989630-22991351 REVERSE LENGTH=398
Length = 398
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 249 NNIQNGSQPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYK 291
N N + +R C C TKTP WR+GP GPK+LCNACG+R +
Sbjct: 220 NGYSNNNGVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQR 262
>AT4G36620.1 | Symbols: GATA19 | GATA transcription factor 19 |
chr4:17268906-17269662 REVERSE LENGTH=211
Length = 211
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 258 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYK 291
R+C +C+ T TP WR GP GPK+LCNACG+R+K
Sbjct: 74 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 107
>AT2G18380.1 | Symbols: GATA20 | GATA transcription factor 20 |
chr2:7982868-7984017 REVERSE LENGTH=208
Length = 208
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 259 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYK 291
R+C C+ T TP WR GP GPK+LCNACG+R+K
Sbjct: 92 RRCASCDTTSTPLWRNGPKGPKSLCNACGIRFK 124
>AT5G26930.1 | Symbols: GATA23 | GATA transcription factor 23 |
chr5:9479592-9480061 FORWARD LENGTH=120
Length = 120
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 258 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 294
+R C C+ TKTP WR GP GPK+LCNACG+R++ R
Sbjct: 25 IRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQR 61
>AT3G50870.1 | Symbols: MNP, HAN, GATA18 | GATA type zinc finger
transcription factor family protein |
chr3:18911112-18912369 FORWARD LENGTH=295
Length = 295
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 258 VRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYK 291
R+C +C+ T TP WR GP GPK+LCNACG+R+K
Sbjct: 151 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFK 184
>AT5G49300.1 | Symbols: GATA16 | GATA transcription factor 16 |
chr5:19984849-19985475 REVERSE LENGTH=139
Length = 139
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 261 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 294
C C +KTP WR GP+GPK+LCNACG+R + R
Sbjct: 38 CADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKR 71
>AT3G06740.1 | Symbols: GATA15 | GATA transcription factor 15 |
chr3:2126658-2127265 FORWARD LENGTH=149
Length = 149
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 255 SQPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 294
S + C C +KTP WR GP GPK+LCNACG+R + R
Sbjct: 37 SNEKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKR 76
>AT3G20750.1 | Symbols: GATA29 | GATA transcription factor 29 |
chr3:7255016-7256140 FORWARD LENGTH=208
Length = 208
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 258 VRKC--MHCEITKTPQWRAGPMGPKTLCNACGVRYKS 292
++KC M+C TP WR GP+GPK+LCNACG++++
Sbjct: 156 MKKCTNMNCNALNTPMWRRGPLGPKSLCNACGIKFRK 192
>AT3G16870.1 | Symbols: GATA17 | GATA transcription factor 17 |
chr3:5763752-5764576 REVERSE LENGTH=190
Length = 190
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 259 RKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 294
R C+ C +TP WR GP GPK+LCNACG++ + R
Sbjct: 42 RTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKR 77
>AT4G16141.1 | Symbols: | GATA type zinc finger transcription
factor family protein | chr4:9131872-9132893 REVERSE
LENGTH=197
Length = 197
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 261 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 294
C+ C ++TP WR GP GPK+LCNACG++ + R
Sbjct: 39 CVDCGTSRTPLWRGGPAGPKSLCNACGIKSRKKR 72
>AT4G17570.1 | Symbols: GATA26 | GATA transcription factor 26 |
chr4:9784329-9786974 REVERSE LENGTH=510
Length = 510
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 261 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRP 301
C HC +T TP WR GP LCNACG R+++ Y P
Sbjct: 7 CYHCGVTNTPLWRNGPPEKPVLCNACGSRWRTKGTLVNYTP 47
>AT4G17570.3 | Symbols: GATA26 | GATA transcription factor 26 |
chr4:9784329-9786974 REVERSE LENGTH=514
Length = 514
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 261 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRP 301
C HC +T TP WR GP LCNACG R+++ Y P
Sbjct: 7 CYHCGVTNTPLWRNGPPEKPVLCNACGSRWRTKGTLVNYTP 47
>AT4G24470.3 | Symbols: TIFY1 | GATA-type zinc finger protein with
TIFY domain | chr4:12645785-12647734 FORWARD LENGTH=317
Length = 317
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 246 SDGNNIQNGSQPVRKCMHCEITK--TPQWRAGPMGPKTLCNACGV 288
+D ++ Q+ + P C HC I+ TP R GP GP+TLCNACG+
Sbjct: 199 TDQDSAQDDAHPEISCTHCGISSKCTPMMRRGPSGPRTLCNACGL 243
>AT4G24470.2 | Symbols: ZIM, GATA25 | GATA-type zinc finger protein
with TIFY domain | chr4:12645785-12647734 FORWARD
LENGTH=309
Length = 309
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 246 SDGNNIQNGSQPVRKCMHCEITK--TPQWRAGPMGPKTLCNACGV 288
+D ++ Q+ + P C HC I+ TP R GP GP+TLCNACG+
Sbjct: 199 TDQDSAQDDAHPEISCTHCGISSKCTPMMRRGPSGPRTLCNACGL 243
>AT4G24470.1 | Symbols: ZIM, TIFY1, GATA25 | GATA-type zinc finger
protein with TIFY domain | chr4:12645785-12647734
FORWARD LENGTH=309
Length = 309
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 246 SDGNNIQNGSQPVRKCMHCEITK--TPQWRAGPMGPKTLCNACGV 288
+D ++ Q+ + P C HC I+ TP R GP GP+TLCNACG+
Sbjct: 199 TDQDSAQDDAHPEISCTHCGISSKCTPMMRRGPSGPRTLCNACGL 243