Miyakogusa Predicted Gene

Lj5g3v1811650.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1811650.2 tr|G7I373|G7I373_MEDTR
Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit
OS=Medi,85.14,0,Ribophorin_I,Ribophorin I; seg,NULL; SUBFAMILY NOT
NAMED,NULL; RIBOPHORIN I,Ribophorin I,CUFF.56039.2
         (464 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01720.1 | Symbols:  | Ribophorin I | chr2:317193-320016 REVE...   619   e-177
AT1G76400.1 | Symbols:  | Ribophorin I | chr1:28658713-28661672 ...   423   e-118

>AT2G01720.1 | Symbols:  | Ribophorin I | chr2:317193-320016 REVERSE
           LENGTH=464
          Length = 464

 Score =  619 bits (1596), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 298/440 (67%), Positives = 353/440 (80%), Gaps = 1/440 (0%)

Query: 24  SSSQDVHIVNAERRIDLTSHIVKVYLTLKVENLGTSPVSEVHLAFSPTESEHLAIVKAAA 83
           SS+QD+ IVNAERRIDL+SHIVK +LTLKVEN+G  P +E+ LAF PT+ ++LA+V+A A
Sbjct: 22  SSAQDLQIVNAERRIDLSSHIVKAFLTLKVENIGKDPAAEMLLAFPPTQIKNLAMVQALA 81

Query: 84  TSGKRKKKTYVPLDVKSAELPDGPNGTKFFSIALLTPLSKGETTTLEVLYRLTHSLEPFP 143
           T+GK+KKKTY+PLDVK  E PD PN T ++ +  ++PL  GET +LEVLY LTHSLEPFP
Sbjct: 82  TTGKKKKKTYLPLDVKPTEQPDAPNDTGYYRVTFISPLGPGETVSLEVLYILTHSLEPFP 141

Query: 144 VEISQSESQLVYFRDSAILLSPYHVKQQTTFIKTPSTRVESFTVVEPTKRAGTELKYGXX 203
           VEI+QSESQLVY+ DSA++LSPYHVKQQTTFIKTPSTRVESFT +EP  RAG E+KYG  
Sbjct: 142 VEITQSESQLVYYHDSAVILSPYHVKQQTTFIKTPSTRVESFTSIEPANRAGKEIKYGPY 201

Query: 204 XXXXXXXXXXVLVHFENNNPFAVVEELEREIEISHWGSVQVTERYRLVHAGARHKGVFSR 263
                     V++HFENN+PFAVVEEL REIEISHWGS+Q+TE YRL H GARHKGVFSR
Sbjct: 202 ENRASYSYTPVIIHFENNSPFAVVEELVREIEISHWGSLQITENYRLTHGGARHKGVFSR 261

Query: 264 VEYQTRSGGSGVSSFKNLLLKLPPRVHSVYYRDEIGNISSSHLRTDFLKSELEIEPRYPL 323
           V+YQ++   SG SSF  LL  LPPRV+SVYYRDEIGNIS+SHLRT F KSELE EPRYPL
Sbjct: 262 VDYQSKRSVSGASSFNALLAVLPPRVNSVYYRDEIGNISTSHLRTGFRKSELEFEPRYPL 321

Query: 324 FGGWKSTFVIGYGVPLQDFLFESPDGRRYLNFTFGCP-AEAVVDKLIVKVVLPEGSKDPA 382
           FGGW +TF+IGY VPL+D+LFE+ DGRRYLNFTFGCP  E +V+KL +KVVLPEGSKDP+
Sbjct: 322 FGGWSATFIIGYRVPLEDYLFEASDGRRYLNFTFGCPLVETIVNKLTIKVVLPEGSKDPS 381

Query: 383 AVIPFEVEQHLETKYSYLDVVGRTVVALEKRNVVPEHNTPFQVYYNFNPIFMLAEPXXXX 442
           AV+PF V Q L+ KYSYLD+VGRTVV L+K NVVP HN PFQVYY F PI+MLAEP    
Sbjct: 382 AVLPFTVNQELQVKYSYLDIVGRTVVVLQKDNVVPTHNVPFQVYYTFKPIYMLAEPFMLV 441

Query: 443 XXXXXXXXXXXXYLHMDISI 462
                       Y+H+D++I
Sbjct: 442 SAFFLVFVASLAYVHIDLNI 461


>AT1G76400.1 | Symbols:  | Ribophorin I | chr1:28658713-28661672
           REVERSE LENGTH=614
          Length = 614

 Score =  423 bits (1087), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 222/439 (50%), Positives = 290/439 (66%), Gaps = 3/439 (0%)

Query: 28  DVHIVNAERRIDLTSHIVKVYLTLKVENLGTSPVSEVHLAFSPTESEHLAIVKAAATSGK 87
           D+ +   ERRID+TS I +V  TLKV N G+  VSE  L F      +LA +  A + GK
Sbjct: 26  DLVLSKVERRIDVTSQIARVTKTLKVVNSGSESVSEFALTFPKFLGNNLAYLSVAPSEGK 85

Query: 88  RK-KKTYVPLDVKSAELPDGPNGTKFFSIALLTPLSKGETTTLEVLYRLTHSLEPFPVEI 146
            K K+T V L V+ A+    P+    +S+AL  PLSKG+T TLEV+   T+ L+PFP +I
Sbjct: 86  GKSKRTLVNLSVREADQKGLPDSISVYSVALPKPLSKGDTLTLEVVAAFTNVLQPFPEKI 145

Query: 147 SQSESQLVYFRDSAILLSPYHVKQQTTFIKTPSTRVESFTVVEPTKRAGTELKYGXXXXX 206
           +Q E  LV  ++SA  LSPY V+ Q+  IK P+ R+ES+T  E TK  G+ELKYG     
Sbjct: 146 TQGEIHLVMLQESAQYLSPYAVESQSLSIKLPNARIESYTKFENTKLQGSELKYGPYKNL 205

Query: 207 XXXXXXXVLVHFENNNPFAVVEELEREIEISHWGSVQVTERYRLVHAGARHKGVFSRVEY 266
                  ++VHFE+   FAV E+L REIE+SHWG+VQVTE Y +VH GA+ KG FSR+++
Sbjct: 206 QSYSYSPIVVHFESKAAFAVAEKLVREIEVSHWGNVQVTENYNVVHRGAQLKGEFSRLDF 265

Query: 267 QTRSGGSGVSSFKNLLLKLPPRVHSVYYRDEIGNISSSHLRTDFLKSELEIEPRYPLFGG 326
           Q R    G S+F++LL +LPPR HS+YYRD+IGNIS+S +++D  K+EL IEPR+PLFGG
Sbjct: 266 QARPNPRGASAFRHLLARLPPRAHSIYYRDDIGNISTSEMKSDSKKTELLIEPRFPLFGG 325

Query: 327 WKSTFVIGYGVPLQDFLFESPDGRRYLNFTFGCPA-EAVVDKLIVKVVLPEGSKDPAAVI 385
           WK+ F IGYG+PL DFLF S +G+R+LN +FG P  + V +KLIV+VVLPEGSKD +   
Sbjct: 326 WKTFFTIGYGLPLTDFLFAS-EGKRFLNISFGSPILDLVTEKLIVQVVLPEGSKDISVTT 384

Query: 386 PFEVEQHLETKYSYLDVVGRTVVALEKRNVVPEHNTPFQVYYNFNPIFMLAEPXXXXXXX 445
           PF V+Q  E KYS+LD+ GR VV LEK NVVP+HN   QVYY F+ I +L+EP       
Sbjct: 385 PFAVKQSQEIKYSHLDIAGRPVVVLEKNNVVPDHNQHIQVYYKFSNINLLSEPLMLISGF 444

Query: 446 XXXXXXXXXYLHMDISIRK 464
                    Y   DISI K
Sbjct: 445 FILFITCIIYTRADISISK 463