Miyakogusa Predicted Gene
- Lj5g3v1810090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1810090.1 CUFF.55971.1
(113 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10350.1 | Symbols: | P-loop containing nucleoside triphosph... 202 5e-53
AT3G10350.2 | Symbols: | P-loop containing nucleoside triphosph... 201 1e-52
AT5G60730.1 | Symbols: | Anion-transporting ATPase | chr5:24422... 184 1e-47
AT1G01910.5 | Symbols: | P-loop containing nucleoside triphosph... 49 6e-07
AT1G01910.4 | Symbols: | P-loop containing nucleoside triphosph... 49 8e-07
AT1G01910.2 | Symbols: | P-loop containing nucleoside triphosph... 49 8e-07
AT1G01910.1 | Symbols: | P-loop containing nucleoside triphosph... 49 8e-07
>AT3G10350.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:3208310-3210678
FORWARD LENGTH=411
Length = 411
Score = 202 bits (513), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 96/113 (84%), Positives = 109/113 (96%)
Query: 1 MIKVRDLFRDTDSTEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQILPPSASDC 60
M+KVR+LFRDT+STEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQ+LPPS+SDC
Sbjct: 299 MVKVRELFRDTESTEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQLLPPSSSDC 358
Query: 61 KFCSMKRKDQTRALDMIQNDPELSSLLMIQAPLVDVEIRGVPALKFLGDIIWK 113
KFCS+KRKDQ RALDMI+ D ELS+L +++APLVD+EIRGVPAL+FLGDIIWK
Sbjct: 359 KFCSIKRKDQMRALDMIREDSELSALTLMEAPLVDMEIRGVPALRFLGDIIWK 411
>AT3G10350.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:3208310-3210678
FORWARD LENGTH=433
Length = 433
Score = 201 bits (510), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/113 (84%), Positives = 109/113 (96%)
Query: 1 MIKVRDLFRDTDSTEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQILPPSASDC 60
M+KVR+LFRDT+STEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQ+LPPS+SDC
Sbjct: 321 MVKVRELFRDTESTEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQLLPPSSSDC 380
Query: 61 KFCSMKRKDQTRALDMIQNDPELSSLLMIQAPLVDVEIRGVPALKFLGDIIWK 113
KFCS+KRKDQ RALDMI+ D ELS+L +++APLVD+EIRGVPAL+FLGDIIWK
Sbjct: 381 KFCSIKRKDQMRALDMIREDSELSALTLMEAPLVDMEIRGVPALRFLGDIIWK 433
>AT5G60730.1 | Symbols: | Anion-transporting ATPase |
chr5:24422838-24425352 FORWARD LENGTH=391
Length = 391
Score = 184 bits (466), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 101/113 (89%)
Query: 1 MIKVRDLFRDTDSTEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQILPPSASDC 60
M KVR++FRD D+TEFVIVTIPTVMA++ESSRL ASL+KE+VPV RLIVNQ+LP S SDC
Sbjct: 279 MEKVRNVFRDVDTTEFVIVTIPTVMAINESSRLHASLRKENVPVHRLIVNQLLPQSESDC 338
Query: 61 KFCSMKRKDQTRALDMIQNDPELSSLLMIQAPLVDVEIRGVPALKFLGDIIWK 113
KFCS++RK+QTR L +IQND ELS L +IQ+PL+D EIRGVPALKF+GD+IWK
Sbjct: 339 KFCSIRRKEQTRVLGLIQNDTELSGLKLIQSPLLDAEIRGVPALKFMGDLIWK 391
>AT1G01910.5 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:313595-315644
REVERSE LENGTH=249
Length = 249
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 3 KVRDLFRDTDSTEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQILPPSAS-DCK 61
+V F+D D T FV V IP +++ E+ RL L K + +I+NQ+L + K
Sbjct: 102 QVNRQFKDPDMTTFVCVCIPEFLSLYETERLVQELAKFEIDTHNIIINQVLYDDEDVESK 161
Query: 62 FCSMKRKDQTRALD---MIQNDPELSSLLMIQAPLVDVEIRGVPALK 105
+ + Q + LD M+ +D ++ L PL+ E+ GV ALK
Sbjct: 162 LLRARMRMQQKYLDQFYMLYDDFNITKL-----PLLPEEVTGVEALK 203
>AT1G01910.4 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:313595-315831
REVERSE LENGTH=353
Length = 353
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 3 KVRDLFRDTDSTEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQILPPSAS-DCK 61
+V F+D D T FV V IP +++ E+ RL L K + +I+NQ+L + K
Sbjct: 206 QVNRQFKDPDMTTFVCVCIPEFLSLYETERLVQELAKFEIDTHNIIINQVLYDDEDVESK 265
Query: 62 FCSMKRKDQTRALD---MIQNDPELSSLLMIQAPLVDVEIRGVPALK 105
+ + Q + LD M+ +D ++ L PL+ E+ GV ALK
Sbjct: 266 LLRARMRMQQKYLDQFYMLYDDFNITKL-----PLLPEEVTGVEALK 307
>AT1G01910.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:313595-315831
REVERSE LENGTH=353
Length = 353
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 3 KVRDLFRDTDSTEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQILPPSAS-DCK 61
+V F+D D T FV V IP +++ E+ RL L K + +I+NQ+L + K
Sbjct: 206 QVNRQFKDPDMTTFVCVCIPEFLSLYETERLVQELAKFEIDTHNIIINQVLYDDEDVESK 265
Query: 62 FCSMKRKDQTRALD---MIQNDPELSSLLMIQAPLVDVEIRGVPALK 105
+ + Q + LD M+ +D ++ L PL+ E+ GV ALK
Sbjct: 266 LLRARMRMQQKYLDQFYMLYDDFNITKL-----PLLPEEVTGVEALK 307
>AT1G01910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:313595-315831
REVERSE LENGTH=353
Length = 353
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 3 KVRDLFRDTDSTEFVIVTIPTVMAVSESSRLSASLKKESVPVKRLIVNQILPPSAS-DCK 61
+V F+D D T FV V IP +++ E+ RL L K + +I+NQ+L + K
Sbjct: 206 QVNRQFKDPDMTTFVCVCIPEFLSLYETERLVQELAKFEIDTHNIIINQVLYDDEDVESK 265
Query: 62 FCSMKRKDQTRALD---MIQNDPELSSLLMIQAPLVDVEIRGVPALK 105
+ + Q + LD M+ +D ++ L PL+ E+ GV ALK
Sbjct: 266 LLRARMRMQQKYLDQFYMLYDDFNITKL-----PLLPEEVTGVEALK 307