Miyakogusa Predicted Gene

Lj5g3v1795780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1795780.1 Non Chatacterized Hit- tr|I1LCX3|I1LCX3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57755
PE,84.57,0,seg,NULL; EXOCYST COMPLEX COMPONENT 4,NULL,CUFF.55966.1
         (613 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10380.1 | Symbols: SEC8, ATSEC8 | subunit of exocyst complex...   882   0.0  

>AT3G10380.1 | Symbols: SEC8, ATSEC8 | subunit of exocyst complex 8 |
            chr3:3219922-3228356 REVERSE LENGTH=1053
          Length = 1053

 Score =  882 bits (2278), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/626 (73%), Positives = 511/626 (81%), Gaps = 23/626 (3%)

Query: 1    MAPGGKAQVAAKELLDSILDAVVRIFENHVAVGELLEAKACQHADMNTPKSMPV------ 54
            MAPGGKAQ AAKELLDSILD +V+IFENHV +GELLE KA QH D+NTP+S+P       
Sbjct: 436  MAPGGKAQAAAKELLDSILDTIVKIFENHVVIGELLEMKASQH-DINTPRSLPTDVNWNT 494

Query: 55   --------GGYSLGFSLTVLQSECQQLICEILRATPEAASADAAVQTARLASKVPSKDKR 106
                    GGY++ F LTVLQSECQQLICEILRATPEAASADAA QTA+LA K P KDKR
Sbjct: 495  ESEASQATGGYTISFPLTVLQSECQQLICEILRATPEAASADAAAQTAKLAKKAPKKDKR 554

Query: 107  DGSEDGLTFAFRFTDAMISIPNQGADLVRQGWSRKGPNVLQEGYGSAAVLPEEGIYLAAS 166
            D  EDGLTF FRFTDA +SI NQGADL+RQGW ++ PN   EGYGSAAVLPE+GIYLAAS
Sbjct: 555  DAPEDGLTFTFRFTDATVSISNQGADLIRQGWGKRAPNASLEGYGSAAVLPEQGIYLAAS 614

Query: 167  VYRPVLQFTDKIASMLPTKYSQLGNDGLLAFVENFVKDHFLPTMFVDYRKGVQQAISSPA 226
            +YRPVLQFTDKI SMLP K+SQL NDGLL F ENFVKDH LPTMFVDYRKGVQQAISS A
Sbjct: 615  IYRPVLQFTDKITSMLPKKHSQLVNDGLLTFTENFVKDHLLPTMFVDYRKGVQQAISSAA 674

Query: 227  AFRPRAHVVTAYTPSIEKGRPVLQGLLAIDYLTKEVLGWAQAMPKFANDLVKYVQTFLER 286
            AFRPRAH  T YT ++EKGRP+LQGLLAID L KEVLGWAQAMPKFA DLVKYVQTFLER
Sbjct: 675  AFRPRAHTTT-YTATVEKGRPILQGLLAIDLLAKEVLGWAQAMPKFATDLVKYVQTFLER 733

Query: 287  TYERCRTSYMEAVLEKQSYMLIGRHDIEKLMRIDPSSAYLPNLLGHINMESNSSDAETIE 346
            T+ERCRTSYMEAVLEK SYMLIGRHDIEKLMR+D +SA LP+ LGH       S +E + 
Sbjct: 734  TFERCRTSYMEAVLEKLSYMLIGRHDIEKLMRLDAASACLPSTLGHA-----VSHSEAVG 788

Query: 347  AXXXXXXXXXXXRPIKQENLIHDDNKLILLASLSDSLEYVADSIERLGQTTQRASNHVEG 406
                        RPIKQ+NLI DDNKLILLASLSDSLEYVADSIERLGQ   R ++  EG
Sbjct: 789  TEVELSDLFLSLRPIKQDNLIRDDNKLILLASLSDSLEYVADSIERLGQAVPRVASQAEG 848

Query: 407  KYHSHSDGAPARSLGSFAQDYRKLAIDCLKVLRVEMQLETIFHMQEMTNTEYLDDQDAEE 466
              +S +  A  R+L SFA +YRKLA DCLKVLRVEMQLET+FH+QEMTN EYL+D+DAEE
Sbjct: 849  --NSRNQAASPRNLASFADEYRKLATDCLKVLRVEMQLETVFHLQEMTNREYLEDEDAEE 906

Query: 467  PDDFIISLTSQITRRDEEMAPFISNSKRNYIYGGICGVAANASIKALADMKSINLFGVQQ 526
            PDDF+ISLTSQITRR+E MAPFIS  KRNY++GGI G+AANASIKALADM+SINLFGVQQ
Sbjct: 907  PDDFVISLTSQITRREEGMAPFISGEKRNYVFGGISGIAANASIKALADMRSINLFGVQQ 966

Query: 527  ICRNSIALEQALAAIPSIDSEAVQQRLDRVRTYYELLNMPFEALVAFITEHVHLFTAIEY 586
            ICRN+IA+EQA+AAIP ID E VQQ LDRVRTY+ELLNMPFEAL+AFI EH  +FT  EY
Sbjct: 967  ICRNTIAVEQAMAAIPYIDGETVQQNLDRVRTYFELLNMPFEALLAFIAEHDQMFTPTEY 1026

Query: 587  ANLLNVQVPGREIPPDGQDRVSEILS 612
            +NLL V VPGR+ P D Q R+ EILS
Sbjct: 1027 SNLLKVNVPGRDTPSDAQSRLLEILS 1052