Miyakogusa Predicted Gene
- Lj5g3v1794690.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1794690.1 Non Chatacterized Hit- tr|B9SUC3|B9SUC3_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,50.48,1e-18,DUF4050,Domain of unknown function DUF4050,CUFF.55944.1
(119 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54880.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 90 3e-19
AT5G03440.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 69 6e-13
AT5G03440.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 69 6e-13
AT5G25360.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 61 2e-10
AT5G25360.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 61 2e-10
AT3G15770.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 56 5e-09
AT3G15770.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 56 5e-09
AT4G32342.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 53 4e-08
AT1G15350.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 49 8e-07
AT1G15350.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 49 9e-07
AT1G15350.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 49 9e-07
>AT3G54880.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G25360.2); Has 137 Blast hits to 137 proteins
in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink). | chr3:20337078-20337786 REVERSE
LENGTH=112
Length = 112
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%)
Query: 31 KAYRSSHSNGKQNLKQTSNFVNHAAIAWHENRKRWVGDKSRHPPREAKDPIISWSTSYEE 90
K + S+ K N + T VNH A W ENR++WVGD+SR AKD IISWST+YE+
Sbjct: 21 KLVKDEKSSVKTNSENTLTLVNHGAKMWQENREKWVGDQSRQRKNTAKDQIISWSTTYED 80
Query: 91 LLSTNEPFAEPIPLP 105
LLST+EPF+E IPLP
Sbjct: 81 LLSTHEPFSESIPLP 95
>AT5G03440.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G54880.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr5:857179-857898 REVERSE LENGTH=98
Length = 98
Score = 68.9 bits (167), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 50 FVNHAAIAWHENRKRWVGDKSRHPPREAKDPIISWSTSYEELLSTNEPFAEPIPL 104
FVNHA IAW E RK+WVGD S +P+I ++ +YE+LL++N PF +PIPL
Sbjct: 26 FVNHAEIAWQEMRKKWVGDPSNRTSEMPDEPVIGFNATYEDLLTSNTPFNKPIPL 80
>AT5G03440.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G54880.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr5:857179-857898 REVERSE LENGTH=98
Length = 98
Score = 68.9 bits (167), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 50 FVNHAAIAWHENRKRWVGDKSRHPPREAKDPIISWSTSYEELLSTNEPFAEPIPL 104
FVNHA IAW E RK+WVGD S +P+I ++ +YE+LL++N PF +PIPL
Sbjct: 26 FVNHAEIAWQEMRKKWVGDPSNRTSEMPDEPVIGFNATYEDLLTSNTPFNKPIPL 80
>AT5G25360.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G32342.1). | chr5:8799934-8802333 REVERSE
LENGTH=169
Length = 169
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 15 TLKHSKSADEVKRSNEKAYRSSHSNGKQNLKQTSNFVNHAAIAWHENRKRWVGDKSRHPP 74
TL+ +S + +N + +S SN + FVNH W++ R++W+ + +
Sbjct: 69 TLQSQRSMSSISFTNNTSTSASTSNPTE-------FVNHGLNLWNQTRQQWLANGTSQKK 121
Query: 75 REAKDPIISWSTSYEELLSTNEPFAEPIPLP 105
+ ++P ISW+ +YE LL N+ F+ PIPLP
Sbjct: 122 AKVREPTISWNATYESLLGMNKRFSRPIPLP 152
>AT5G25360.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
- 339 (source: NCBI BLink). | chr5:8799934-8802333
REVERSE LENGTH=169
Length = 169
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 15 TLKHSKSADEVKRSNEKAYRSSHSNGKQNLKQTSNFVNHAAIAWHENRKRWVGDKSRHPP 74
TL+ +S + +N + +S SN + FVNH W++ R++W+ + +
Sbjct: 69 TLQSQRSMSSISFTNNTSTSASTSNPTE-------FVNHGLNLWNQTRQQWLANGTSQKK 121
Query: 75 REAKDPIISWSTSYEELLSTNEPFAEPIPLP 105
+ ++P ISW+ +YE LL N+ F+ PIPLP
Sbjct: 122 AKVREPTISWNATYESLLGMNKRFSRPIPLP 152
>AT3G15770.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G15350.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr3:5340243-5341216 FORWARD LENGTH=161
Length = 161
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 50 FVNHAAIAWHENRKRWVGDKSRHPPRE--AKDPIISWSTSYEELLSTNEPFAEPIPL 104
FVNH + W++ R++WVGDK R R+ ++PI++ + +YE LL +N+ F PIPL
Sbjct: 88 FVNHGLVLWNQTRQQWVGDK-RSESRKSVGREPILNENVTYESLLGSNKRFPRPIPL 143
>AT3G15770.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G25360.2); Has 143 Blast hits to 143 proteins
in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes -
7 (source: NCBI BLink). | chr3:5340243-5341216 FORWARD
LENGTH=162
Length = 162
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 50 FVNHAAIAWHENRKRWVGDKSRHPPRE--AKDPIISWSTSYEELLSTNEPFAEPIPL 104
FVNH + W++ R++WVGDK R R+ ++PI++ + +YE LL +N+ F PIPL
Sbjct: 89 FVNHGLVLWNQTRQQWVGDK-RSESRKSVGREPILNENVTYESLLGSNKRFPRPIPL 144
>AT4G32342.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G25360.2);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr4:15615184-15616200
REVERSE LENGTH=161
Length = 161
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 47 TSNFVNHAAIAWHENRKRWVGDKSRHPPREAKDPIISWSTSYEELLSTNEPFAEPIPL 104
++ FVNH I W+ R++W +R +P ISW+++Y+ LLSTN+ F +PIPL
Sbjct: 87 STEFVNHGLILWNHTRQQWRECLTRQQCL-VPEPAISWNSTYDSLLSTNKLFPQPIPL 143
>AT1G15350.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G15770.2); Has 145 Blast
hits to 145 proteins in 25 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0;
Other Eukaryotes - 7 (source: NCBI BLink). |
chr1:5278481-5279056 REVERSE LENGTH=108
Length = 108
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 50 FVNHAAIAWHENRKRWVG-DKSRHPPREAKDPIISWST-SYEELLSTNEPFAEPIPL 104
+VN + W++ R+RWVG DK +P + ++W+T +Y+ LL +N+ F +PIPL
Sbjct: 34 YVNQGLLLWNQTRERWVGKDKPNNPVDHNQGAKLNWNTATYDSLLGSNKLFPQPIPL 90
>AT1G15350.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins
in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes -
7 (source: NCBI BLink). | chr1:5278481-5279486 REVERSE
LENGTH=154
Length = 154
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 50 FVNHAAIAWHENRKRWVG-DKSRHPPREAKDPIISWST-SYEELLSTNEPFAEPIPL 104
+VN + W++ R+RWVG DK +P + ++W+T +Y+ LL +N+ F +PIPL
Sbjct: 80 YVNQGLLLWNQTRERWVGKDKPNNPVDHNQGAKLNWNTATYDSLLGSNKLFPQPIPL 136
>AT1G15350.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins
in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes -
7 (source: NCBI BLink). | chr1:5278481-5279486 REVERSE
LENGTH=154
Length = 154
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 50 FVNHAAIAWHENRKRWVG-DKSRHPPREAKDPIISWST-SYEELLSTNEPFAEPIPL 104
+VN + W++ R+RWVG DK +P + ++W+T +Y+ LL +N+ F +PIPL
Sbjct: 80 YVNQGLLLWNQTRERWVGKDKPNNPVDHNQGAKLNWNTATYDSLLGSNKLFPQPIPL 136