Miyakogusa Predicted Gene

Lj5g3v1793350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1793350.1 Non Chatacterized Hit- tr|D8S908|D8S908_SELML
Putative uncharacterized protein OS=Selaginella
moelle,41.54,5e-19,AWPM-19,AWPM-19-like; seg,NULL,CUFF.55923.1
         (177 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04560.1 | Symbols:  | AWPM-19-like family protein | chr1:124...   239   1e-63
AT1G29520.1 | Symbols:  | AWPM-19-like family protein | chr1:103...    87   7e-18
AT5G46530.1 | Symbols:  | AWPM-19-like family protein | chr5:188...    86   1e-17
AT5G18970.1 | Symbols:  | AWPM-19-like family protein | chr5:633...    71   3e-13

>AT1G04560.1 | Symbols:  | AWPM-19-like family protein |
           chr1:1245070-1245888 FORWARD LENGTH=186
          Length = 186

 Score =  239 bits (609), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 118/169 (69%), Positives = 130/169 (76%), Gaps = 3/169 (1%)

Query: 3   VGRNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSFGGNGATMFFLIFSILAAVL 62
           VGRN+AAPLLFLNL+MY IVLGFASWCLN++INGQT HPSFGGNGAT FFL FSILAAV+
Sbjct: 5   VGRNIAAPLLFLNLVMYLIVLGFASWCLNKYINGQTNHPSFGGNGATPFFLTFSILAAVV 64

Query: 63  GIVSKFIGGNHIRAWRSDSXXXXXXXXXXXXXXXXXXMGLACKQIHIGGHRGWRLRIVEA 122
           G+ SK  G NHIR WR+DS                  MGLACKQI+IGG RGWRL+++EA
Sbjct: 65  GVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACKQINIGGWRGWRLKMIEA 124

Query: 123 FIIILTFTQLLYLMLIHAGIYSSRYGPGYRDTDYGTGDPLHKGGAGHVP 171
           FIIILTFTQLLYLMLIHAG  SS+YGPGYRD DY TG      G GHVP
Sbjct: 125 FIIILTFTQLLYLMLIHAGSLSSKYGPGYRDQDYATGQ---AHGHGHVP 170


>AT1G29520.1 | Symbols:  | AWPM-19-like family protein |
           chr1:10323735-10324525 FORWARD LENGTH=158
          Length = 158

 Score = 86.7 bits (213), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 76/150 (50%), Gaps = 18/150 (12%)

Query: 5   RNVAAPLLFLNLIMYFIVLGFASWCLNRFIN---------------GQTYHPSFGGNGAT 49
           + VA+ LL LN  MY IVLG   W +NR I+                  Y P   GN AT
Sbjct: 7   KPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPM--GNAAT 64

Query: 50  MFFLIFSILAAVLGIVSKFIGGNHIRAWRSDSXXXXXXXXXXXXXXXXXXMGLACKQIHI 109
            FF+IF++LA V+G  S   G +HIR+W   S                  MG A K+I +
Sbjct: 65  GFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWKEIEL 124

Query: 110 GGHRGWRLRIVEAFIIILTFTQLLYLMLIH 139
            G R  +LR +EAF+IIL+ TQL+Y+  +H
Sbjct: 125 QG-RNAKLRTMEAFLIILSVTQLIYIAAVH 153


>AT5G46530.1 | Symbols:  | AWPM-19-like family protein |
           chr5:18875576-18876779 FORWARD LENGTH=157
          Length = 157

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 81/155 (52%), Gaps = 18/155 (11%)

Query: 5   RNVAAPLLFLNLIMYFIVLGFASWCLNRFIN-----GQTYH-PSF-------GGNGATMF 51
           + VA+ LL LN  MY IVLG  +W +N+ IN     G  Y  P+         GN AT F
Sbjct: 7   KPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMGNAATGF 66

Query: 52  FLIFSILAAVLGIVSKFIGGNHIRAWRSDSXXXXXXXXXXXXXXXXXXMGLACKQIHIGG 111
           F++F+++A V G  S   G +H+++W + S                  MG  CK+I + G
Sbjct: 67  FIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCKEIEL-G 125

Query: 112 HRGWRLRIVEAFIIILTFTQLLYLMLIHAGIYSSR 146
            R  RLR +EAF+IIL+ TQLLY+    A IY  R
Sbjct: 126 MRNARLRTMEAFLIILSATQLLYI----AAIYGVR 156


>AT5G18970.1 | Symbols:  | AWPM-19-like family protein |
           chr5:6333714-6334539 REVERSE LENGTH=171
          Length = 171

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 14/151 (9%)

Query: 5   RNVAAPLLFLNLIMYFIVLGFASWCLNRFINGQTYHPSF-------------GGNGATMF 51
           ++ A  LL LNL +YF++   ASW +N  I       S               GN AT F
Sbjct: 7   KSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVGNMATGF 66

Query: 52  FLIFSILAAVLGIVSKFIGGNHIRAWRSDSXXXXXXXXXXXXXXXXXXMGLACKQIHIGG 111
           F+IF+++A V+G+ +   G  ++  W S +                  MGLACK+I+IG 
Sbjct: 67  FVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACKEINIGW 126

Query: 112 HRGWRLRIVEAFIIILTFTQLLYLMLIHAGI 142
                LR +E   II++ TQLL    IHAG+
Sbjct: 127 TEA-NLRTLEVLTIIVSATQLLCTGAIHAGV 156