Miyakogusa Predicted Gene

Lj5g3v1770480.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1770480.2 tr|C1MXS9|C1MXS9_MICPC Predicted protein
(Fragment) OS=Micromonas pusilla (strain CCMP1545)
GN=MICPU,40.51,0.000000000001,PREDICTED PROTEIN,NULL; KELCH REPEAT
DOMAIN,NULL; Kelch motif,NULL; Kelch_3,NULL; no
description,Kel,CUFF.55871.2
         (168 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36360.2 | Symbols:  | Galactose oxidase/kelch repeat superfa...   182   8e-47
AT2G36360.1 | Symbols:  | Galactose oxidase/kelch repeat superfa...   182   8e-47
AT2G36360.3 | Symbols:  | Galactose oxidase/kelch repeat superfa...   182   1e-46
AT2G36360.5 | Symbols:  | Galactose oxidase/kelch repeat superfa...   182   1e-46
AT2G36360.4 | Symbols:  | Galactose oxidase/kelch repeat superfa...   182   1e-46
AT1G18610.1 | Symbols:  | Galactose oxidase/kelch repeat superfa...    49   1e-06

>AT2G36360.2 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr2:15243461-15247523 REVERSE
           LENGTH=496
          Length = 496

 Score =  182 bits (463), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 91/156 (58%), Positives = 114/156 (73%), Gaps = 7/156 (4%)

Query: 1   MFGGHGTGGWLSRYDIYYNDCIILDRVSAQWKRLSIGNEPPPARAYHSLTMIGSRYLLIG 60
           +FGGHGTGGWLSRYD+YYND IILDRV+AQWKRL IGNEPPP RAYH++T IG+R+LLIG
Sbjct: 249 LFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLPIGNEPPPPRAYHTMTCIGARHLLIG 308

Query: 61  GFDGKSTYGDSWWLVPQEDPIANRLTASPPRNILEIKDATSLNDDFQPQMKDNQTEKFHF 120
           GFDGK T+GD WWLVP++DPIA R +     N  EIK++    D      K+   + F  
Sbjct: 309 GFDGKLTFGDLWWLVPEDDPIAKRSSVPQVVNPPEIKESERELD------KERGQDGFSI 362

Query: 121 SELQRRLQISVSPSNSRLPIVNELDDKELLELASRL 156
            +LQ+++ ISVS S  RL I  E +D+E +EL +RL
Sbjct: 363 VDLQQKMGISVS-SGLRLQIPEESEDQEFVELGTRL 397


>AT2G36360.1 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr2:15243461-15247523 REVERSE
           LENGTH=496
          Length = 496

 Score =  182 bits (463), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 91/156 (58%), Positives = 114/156 (73%), Gaps = 7/156 (4%)

Query: 1   MFGGHGTGGWLSRYDIYYNDCIILDRVSAQWKRLSIGNEPPPARAYHSLTMIGSRYLLIG 60
           +FGGHGTGGWLSRYD+YYND IILDRV+AQWKRL IGNEPPP RAYH++T IG+R+LLIG
Sbjct: 249 LFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLPIGNEPPPPRAYHTMTCIGARHLLIG 308

Query: 61  GFDGKSTYGDSWWLVPQEDPIANRLTASPPRNILEIKDATSLNDDFQPQMKDNQTEKFHF 120
           GFDGK T+GD WWLVP++DPIA R +     N  EIK++    D      K+   + F  
Sbjct: 309 GFDGKLTFGDLWWLVPEDDPIAKRSSVPQVVNPPEIKESERELD------KERGQDGFSI 362

Query: 121 SELQRRLQISVSPSNSRLPIVNELDDKELLELASRL 156
            +LQ+++ ISVS S  RL I  E +D+E +EL +RL
Sbjct: 363 VDLQQKMGISVS-SGLRLQIPEESEDQEFVELGTRL 397


>AT2G36360.3 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr2:15243461-15247523 REVERSE
           LENGTH=503
          Length = 503

 Score =  182 bits (461), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 90/157 (57%), Positives = 115/157 (73%), Gaps = 2/157 (1%)

Query: 1   MFGGHGTGGWLSRYDIYYNDCIILDRVSAQWKRLSIGNEPPPARAYHSLTMIGSRYLLIG 60
           +FGGHGTGGWLSRYD+YYND IILDRV+AQWKRL IGNEPPP RAYH++T IG+R+LLIG
Sbjct: 249 LFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLPIGNEPPPPRAYHTMTCIGARHLLIG 308

Query: 61  GFDGKSTYGDSWWLVPQEDPIANRLTASPPRNILEIKDATSLNDDFQPQMKDNQTEK-FH 119
           GFDGK T+GD WWLVP++DPIA R +     N  EIK++    D  +   +  + +  F 
Sbjct: 309 GFDGKLTFGDLWWLVPEDDPIAKRSSVPQVVNPPEIKESERELDKLRVWSRQERGQDGFS 368

Query: 120 FSELQRRLQISVSPSNSRLPIVNELDDKELLELASRL 156
             +LQ+++ ISVS S  RL I  E +D+E +EL +RL
Sbjct: 369 IVDLQQKMGISVS-SGLRLQIPEESEDQEFVELGTRL 404


>AT2G36360.5 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr2:15243461-15247523 REVERSE
           LENGTH=512
          Length = 512

 Score =  182 bits (461), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 90/157 (57%), Positives = 115/157 (73%), Gaps = 2/157 (1%)

Query: 1   MFGGHGTGGWLSRYDIYYNDCIILDRVSAQWKRLSIGNEPPPARAYHSLTMIGSRYLLIG 60
           +FGGHGTGGWLSRYD+YYND IILDRV+AQWKRL IGNEPPP RAYH++T IG+R+LLIG
Sbjct: 258 LFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLPIGNEPPPPRAYHTMTCIGARHLLIG 317

Query: 61  GFDGKSTYGDSWWLVPQEDPIANRLTASPPRNILEIKDATSLNDDFQPQMKDNQTEK-FH 119
           GFDGK T+GD WWLVP++DPIA R +     N  EIK++    D  +   +  + +  F 
Sbjct: 318 GFDGKLTFGDLWWLVPEDDPIAKRSSVPQVVNPPEIKESERELDKLRVWSRQERGQDGFS 377

Query: 120 FSELQRRLQISVSPSNSRLPIVNELDDKELLELASRL 156
             +LQ+++ ISVS S  RL I  E +D+E +EL +RL
Sbjct: 378 IVDLQQKMGISVS-SGLRLQIPEESEDQEFVELGTRL 413


>AT2G36360.4 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr2:15243461-15247523 REVERSE
           LENGTH=511
          Length = 511

 Score =  182 bits (461), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 90/157 (57%), Positives = 115/157 (73%), Gaps = 2/157 (1%)

Query: 1   MFGGHGTGGWLSRYDIYYNDCIILDRVSAQWKRLSIGNEPPPARAYHSLTMIGSRYLLIG 60
           +FGGHGTGGWLSRYD+YYND IILDRV+AQWKRL IGNEPPP RAYH++T IG+R+LLIG
Sbjct: 257 LFGGHGTGGWLSRYDVYYNDTIILDRVTAQWKRLPIGNEPPPPRAYHTMTCIGARHLLIG 316

Query: 61  GFDGKSTYGDSWWLVPQEDPIANRLTASPPRNILEIKDATSLNDDFQPQMKDNQTEK-FH 119
           GFDGK T+GD WWLVP++DPIA R +     N  EIK++    D  +   +  + +  F 
Sbjct: 317 GFDGKLTFGDLWWLVPEDDPIAKRSSVPQVVNPPEIKESERELDKLRVWSRQERGQDGFS 376

Query: 120 FSELQRRLQISVSPSNSRLPIVNELDDKELLELASRL 156
             +LQ+++ ISVS S  RL I  E +D+E +EL +RL
Sbjct: 377 IVDLQQKMGISVS-SGLRLQIPEESEDQEFVELGTRL 412


>AT1G18610.1 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr1:6405779-6408831 FORWARD
           LENGTH=556
          Length = 556

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 20/124 (16%)

Query: 1   MFGGHGTGGWLSRYDIYYNDCIILDRVSAQWKR-LSIGNEPPPARAYHSLTMIGSRYLLI 59
           +FGG G    ++  +IYYND  I +  +  WKR ++IGN PP AR  HS +   ++ ++I
Sbjct: 142 VFGGCGKSSGINE-EIYYNDVYIFNTETFVWKRAVTIGN-PPSARDSHSCSSWKNKLVVI 199

Query: 60  GGFDGKSTY------GDSWWLVPQE--------DPIANRLTASPPRNIL---EIKDATSL 102
           GG DG   Y       D+  L+ +E         P A  +T S  RN        DA +L
Sbjct: 200 GGEDGHDYYLSDVHILDTDTLIWKELNTSGQLLTPRAGHVTVSLGRNFFVFGGFTDAQNL 259

Query: 103 NDDF 106
            DD 
Sbjct: 260 YDDL 263