Miyakogusa Predicted Gene

Lj5g3v1770460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1770460.1 Non Chatacterized Hit- tr|Q9FT58|Q9FT58_ARATH
Putative uncharacterized protein T25B15_10
OS=Arabidop,27.83,1e-17,coiled-coil,NULL; seg,NULL,CUFF.55869.1
         (662 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G52240.1 | Symbols:  | unknown protein; Has 220 Blast hits to...   201   1e-51

>AT3G52240.1 | Symbols:  | unknown protein; Has 220 Blast hits to
           193 proteins in 66 species: Archae - 0; Bacteria - 15;
           Metazoa - 53; Fungi - 33; Plants - 66; Viruses - 0;
           Other Eukaryotes - 53 (source: NCBI BLink). |
           chr3:19372902-19375799 REVERSE LENGTH=680
          Length = 680

 Score =  201 bits (511), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 170/541 (31%), Positives = 254/541 (46%), Gaps = 74/541 (13%)

Query: 20  EDSTAMTIEFLRARLLSERSISKSSRQRADELAKKVIELEEQLRVVSLQRKMAEKATADV 79
           +D T++TIEFLRARLL+ER++SKS+R + D LA KV ELEEQL++VSLQRK AE+ATADV
Sbjct: 18  QDPTSVTIEFLRARLLAERAVSKSARAKLDGLADKVAELEEQLKIVSLQRKKAEQATADV 77

Query: 80  LAILENQGISDASEEFDSDLDLEVPCESGVNNDYAKEGERPVSSKGRRYGSEELFGSHAD 139
           LAILE  G +D S+++DS+ D E                                  ++ 
Sbjct: 78  LAILEENGYNDVSDDYDSNSDHEC---------------------------------YSQ 104

Query: 140 SSPVFSRSLSWKGRHDSSRSLEKYKXXXXXXXXXXXXXX--XXPKHRQGKSCRKIRHRQT 197
           S+ V  +SLSWKGR     S +K K                  P+HRQG+SCR+IR  + 
Sbjct: 105 SNSVLGKSLSWKGRRREPGSSDKIKENRNRRHHRGFECAYFSSPRHRQGRSCRQIRRGEA 164

Query: 198 RSVVEE-SRDKSVQXXXXXXXXXXXXXGFPNCSDGGSNXXXXXXXXXXXXXXXANSVNKN 256
           R+V E+  RD +                 P  +D  S                  S N N
Sbjct: 165 RNVSEDYKRDGN---PVEFQENGVRTEMLPQKNDQVSRTVVDVAVVKGDDSLNKLS-NSN 220

Query: 257 HHVDGYGRERDMEKALDDQSQLIDQYEAMEKAQREWEEKFRENNSTTPDSFDPENHSDMT 316
               G   + ++E+AL++++Q+I  +E ME+ QREWE+ FREN S+  D  D  NHSD+T
Sbjct: 221 GLEKGNSTDINLERALENRAQVIGSFEEMEETQREWEKNFRENKSSALDLCDVGNHSDVT 280

Query: 317 EDKDESKAQ--IAGSAKVVTTNAGAGGVCLSEEIFKAEARGIMPKSYDDSGGDNYQKSPT 374
           ++ +  KAQ  + GS  V +         ++ E+   E+   +     D+   +  K   
Sbjct: 281 DESNGEKAQSPLQGSTVVPSLRDTRS---IANEVDFRESFETLSHGSPDNSVTSPDKCCN 337

Query: 375 SSTSDMLGQESSHSPLKGKQIESSASCHCQCSNMNHQVTPGNGYLDSRPPYSFPTDVNGD 434
           S  S  + Q++  S  KGK I  S +        +  +   +      PP + P    G 
Sbjct: 338 SCGSRSVEQDAYSSRDKGKHISESPTSEYSQPQSSKGINEHSSSTIRSPPVTQPNSRGGF 397

Query: 435 LHQNDASRNNNDRYALVLRD-QSHEFSGILESLKQARISLQQELNK-------------- 479
                 + +  D   + ++D +      +L +LKQA++SLQ+++N               
Sbjct: 398 FGSTTTTIHEVDDPLVSVKDVKPDTCETVLTALKQAKLSLQEKVNSLHIRNPDCHSESSY 457

Query: 480 -SPP---------PMEGGYSGKAITPSAFVSKIEDRFNIPVGC-SGLFRLPSDFSDEASD 528
            S P         PME  +S K   PS   S +      PV C +GLFR+P+DF+ +AS+
Sbjct: 458 PSTPGSYMNTYALPMEPAFSTK---PSLPASSVGSMVEFPVICAAGLFRVPTDFTSDASN 514

Query: 529 R 529
           R
Sbjct: 515 R 515