Miyakogusa Predicted Gene

Lj5g3v1769400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1769400.1 tr|Q5N8V3|Q5N8V3_ORYSJ Auxin-regulated
protein-like OS=Oryza sativa subsp. japonica GN=P0035F12.18
P,57.5,2e-18,OTU,Ovarian tumour, otubain; Cysteine proteinases,NULL;
SUBFAMILY NOT NAMED,NULL; OTU DOMAIN CONTAIN,CUFF.55865.1
         (105 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G57810.3 | Symbols:  | Cysteine proteinases superfamily prote...   144   1e-35
AT3G57810.2 | Symbols:  | Cysteine proteinases superfamily prote...   144   1e-35
AT3G57810.1 | Symbols:  | Cysteine proteinases superfamily prote...   140   2e-34
AT2G38025.1 | Symbols:  | Cysteine proteinases superfamily prote...    50   4e-07

>AT3G57810.3 | Symbols:  | Cysteine proteinases superfamily protein
           | chr3:21416336-21417809 FORWARD LENGTH=317
          Length = 317

 Score =  144 bits (363), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/102 (59%), Positives = 83/102 (81%), Gaps = 2/102 (1%)

Query: 2   ELADELRAKVAEELLNRREETEWFIEGDFDLYVTRMQKPCVWGGEPEILMASHVLKTPIS 61
           ELADELR +VA+E + RR+ETEWF+EGDFD YV +++ P VWGGEPE+ MASHVL+ PI+
Sbjct: 204 ELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPELFMASHVLQMPIT 263

Query: 62  VFMRDTSSTEIVNIAKYGEEYRNGKDISINVLFHGYGHYEIL 103
           V+M+D  +  +++IA+YG+EY  GKD  I VL+HG+GHY+ L
Sbjct: 264 VYMKDDKAGGLISIAEYGQEY--GKDDPIRVLYHGFGHYDAL 303


>AT3G57810.2 | Symbols:  | Cysteine proteinases superfamily protein
           | chr3:21416336-21417809 FORWARD LENGTH=317
          Length = 317

 Score =  144 bits (363), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/102 (59%), Positives = 83/102 (81%), Gaps = 2/102 (1%)

Query: 2   ELADELRAKVAEELLNRREETEWFIEGDFDLYVTRMQKPCVWGGEPEILMASHVLKTPIS 61
           ELADELR +VA+E + RR+ETEWF+EGDFD YV +++ P VWGGEPE+ MASHVL+ PI+
Sbjct: 204 ELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPELFMASHVLQMPIT 263

Query: 62  VFMRDTSSTEIVNIAKYGEEYRNGKDISINVLFHGYGHYEIL 103
           V+M+D  +  +++IA+YG+EY  GKD  I VL+HG+GHY+ L
Sbjct: 264 VYMKDDKAGGLISIAEYGQEY--GKDDPIRVLYHGFGHYDAL 303


>AT3G57810.1 | Symbols:  | Cysteine proteinases superfamily protein
           | chr3:21416336-21417809 FORWARD LENGTH=274
          Length = 274

 Score =  140 bits (352), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 61/102 (59%), Positives = 83/102 (81%), Gaps = 2/102 (1%)

Query: 2   ELADELRAKVAEELLNRREETEWFIEGDFDLYVTRMQKPCVWGGEPEILMASHVLKTPIS 61
           ELADELR +VA+E + RR+ETEWF+EGDFD YV +++ P VWGGEPE+ MASHVL+ PI+
Sbjct: 161 ELADELRTRVADEFIQRRQETEWFVEGDFDTYVRQIRDPHVWGGEPELFMASHVLQMPIT 220

Query: 62  VFMRDTSSTEIVNIAKYGEEYRNGKDISINVLFHGYGHYEIL 103
           V+M+D  +  +++IA+YG+EY  GKD  I VL+HG+GHY+ L
Sbjct: 221 VYMKDDKAGGLISIAEYGQEY--GKDDPIRVLYHGFGHYDAL 260


>AT2G38025.1 | Symbols:  | Cysteine proteinases superfamily protein
           | chr2:15915239-15916692 REVERSE LENGTH=234
          Length = 234

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 23/122 (18%)

Query: 4   ADELRAKVAEELLNRREETEWFIEG--------DFDLYVTRMQKPCVWGGEPEILMASHV 55
           ADELR  V E + N  +E E + E             +  R+ +   WGGE E+L+ S +
Sbjct: 113 ADELRMAVKEVICNDPKEREKYKEALVAITVDESLKRFCQRIGRHDFWGGESELLVLSKL 172

Query: 56  LKTPISVFMRD-------TSSTEIVNIAKYGEEYRNG-------KDISINVLFHGYGHYE 101
            K PI V++ +             + I +YG E+R G       K++ + +L+ G  HY+
Sbjct: 173 CKQPIIVYIPEHEHGRGGGYGPGFIPIQEYGSEFRGGWGKGKTNKNV-VRLLYSGRNHYD 231

Query: 102 IL 103
           +L
Sbjct: 232 LL 233