Miyakogusa Predicted Gene

Lj5g3v1749250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1749250.1 Non Chatacterized Hit- tr|G7JT65|G7JT65_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,81.05,0,RmlC-like cupins,RmlC-like cupin domain; no
description,RmlC-like jelly roll fold; Cupin_5,Protein o,CUFF.55922.1
         (193 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19130.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Protein of...   254   2e-68

>AT1G19130.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Protein of
           unknown function DUF985 (InterPro:IPR009327), RmlC-like
           jelly roll fold (InterPro:IPR014710); Has 1465 Blast
           hits to 1465 proteins in 584 species: Archae - 10;
           Bacteria - 1038; Metazoa - 19; Fungi - 43; Plants - 51;
           Viruses - 0; Other Eukaryotes - 304 (source: NCBI
           BLink). | chr1:6609545-6610555 REVERSE LENGTH=192
          Length = 192

 Score =  254 bits (650), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 125/189 (66%), Positives = 150/189 (79%), Gaps = 3/189 (1%)

Query: 3   LSASEIAAKLNLQPHPEGGFYAETFRDHSVHLSTSHLPPQYKVDRPVSTAIYFLLSSGNL 62
           + +SEI  KLNL+ H EGGF+AETFRD SV LSTS LPP +KVDR VST+IYFLL SG++
Sbjct: 6   VKSSEIVGKLNLRAHQEGGFFAETFRDSSVFLSTSQLPPTFKVDRAVSTSIYFLLPSGSV 65

Query: 63  SRLHRIPCAETWHHYIGESITVVELNEQDSTVKFTRLGSDLAD-NQTPQYSVPPNIWFGS 121
           SRLHRIP AETWH Y+GE +TVVEL + D  +KFT LG DL + +Q PQY+VPPN+WFGS
Sbjct: 66  SRLHRIPMAETWHFYLGEPLTVVELYD-DGKLKFTCLGPDLFEGDQKPQYTVPPNVWFGS 124

Query: 122 FPTKDFTISADGGGFVNTPPRDAETHYSLVGCTCAPGFQFNDFELAKRSELVSRFPQLEA 181
           FPTKD   S D G  +    RD+E H+SLVGCTCAP FQF DFELAKRS+L+SRFPQ E+
Sbjct: 125 FPTKDVHFSQD-GALLKAEARDSENHFSLVGCTCAPAFQFEDFELAKRSDLLSRFPQHES 183

Query: 182 LITALTFPD 190
           LIT L++P+
Sbjct: 184 LITMLSYPE 192