Miyakogusa Predicted Gene

Lj5g3v1749230.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1749230.1 tr|C5CVY7|C5CVY7_VARPS Vault protein
inter-alpha-trypsin domain protein (Precursor) OS=Variovorax
pa,24.85,3e-16,VWA_3,NULL; VWFA,von Willebrand factor, type A;
vWA-like,NULL; INTER-ALPHA-TRYPSIN INHIBITOR HEAVY C,CUFF.55921.1
         (375 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19110.1 | Symbols:  | inter-alpha-trypsin inhibitor heavy ch...   511   e-145
AT1G72500.1 | Symbols:  | LOCATED IN: plasma membrane; EXPRESSED...   353   8e-98

>AT1G19110.1 | Symbols:  | inter-alpha-trypsin inhibitor heavy
           chain-related | chr1:6602270-6605766 FORWARD LENGTH=754
          Length = 754

 Score =  511 bits (1316), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 247/377 (65%), Positives = 302/377 (80%), Gaps = 2/377 (0%)

Query: 1   MAEEFSRAVDDGLKLSKRIYFGKDRAVAPPKLPAPMARSPDA--LLPTAPMVYAVIYDPG 58
           MAE+F+RAVDDGLKL+KRIYFGKDRAVA P+ PAPM RS      LPTAPMVYAVI DPG
Sbjct: 1   MAEDFARAVDDGLKLAKRIYFGKDRAVAAPRPPAPMDRSSTTQPYLPTAPMVYAVIPDPG 60

Query: 59  IVDNPDIPSYQPHVYGRCDPPALIPLQMNGVEMEIDCYLDTAFVTVSGSWRLHCVMGSRA 118
           IVDNPD+PSYQPHV+GRCDPPALIPLQMN +E+++DCYLDTA VTV+GSWR+HCVMGS+ 
Sbjct: 61  IVDNPDLPSYQPHVHGRCDPPALIPLQMNSIELDVDCYLDTALVTVTGSWRVHCVMGSKR 120

Query: 119 CDCRIAIPMGHQGSILGVEVTAHRKTYSTQLVVMEDNSVNENATIAQQGGFLKSNIFTLT 178
           CDCRIAIPMG QGSILGVEV   RK+Y+TQL+  ED +  E   + + GGFLK NIFTLT
Sbjct: 121 CDCRIAIPMGEQGSILGVEVEIPRKSYTTQLITAEDGNEFEKTALPETGGFLKPNIFTLT 180

Query: 179 VPQIDGGTNLSIKIQWSQKIVNCNGELTLNVPFTFPEFVTPAGKKMSKKEKIQINVEAVA 238
           +PQ+DGGTNLSIK+ WSQK+    G+  L++PF FPE+VTPA KK+SK+EKI ++V A  
Sbjct: 181 IPQVDGGTNLSIKMTWSQKLTYNQGQFFLDIPFNFPEYVTPAVKKISKREKIYLSVNAGT 240

Query: 239 GSELLCRTMSHPLKEMRRDAGSIGFLYDSQVLSWSNTDFSFSYAVSSSRIDGGVLLQSAS 298
           G+E+LC+  SH LKE  R AG + F Y++ VL WSNTDFSFSY  SSS I GG+ LQSA 
Sbjct: 241 GTEVLCKGCSHQLKEKLRSAGKLRFAYEADVLKWSNTDFSFSYTASSSNIVGGLFLQSAP 300

Query: 299 VHDFDQREMFYMYLSPGDIHRKKVFRKDIIFVIDISGSMQGKLIDDTKNALSSALSKLNP 358
           VHD DQR++F  YL PG   + K F+++++FV+DIS SM GK ++D KNA+S+ALSKL+P
Sbjct: 301 VHDVDQRDIFSFYLFPGKQQKTKAFKREVVFVVDISKSMTGKPLEDVKNAISTALSKLDP 360

Query: 359 DDSFNIIAFNGESFLFS 375
            DSFNII F+ ++ LFS
Sbjct: 361 GDSFNIITFSNDTALFS 377


>AT1G72500.1 | Symbols:  | LOCATED IN: plasma membrane; EXPRESSED
           IN: 23 plant structures; EXPRESSED DURING: 13 growth
           stages; CONTAINS InterPro DOMAIN/s: von Willebrand
           factor, type A (InterPro:IPR002035); BEST Arabidopsis
           thaliana protein match is: inter-alpha-trypsin inhibitor
           heavy chain-related (TAIR:AT1G19110.1); Has 1407 Blast
           hits to 1406 proteins in 307 species: Archae - 6;
           Bacteria - 522; Metazoa - 484; Fungi - 59; Plants - 110;
           Viruses - 0; Other Eukaryotes - 226 (source: NCBI
           BLink). | chr1:27295336-27298556 REVERSE LENGTH=756
          Length = 756

 Score =  353 bits (907), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 179/378 (47%), Positives = 248/378 (65%), Gaps = 6/378 (1%)

Query: 1   MAEEFSRAVDDGLKLSKRIYFGKDRAVAPPKLPAPMARSPDALLPTAPMVYAVIYDPGIV 60
           M+EEF+  V+ GL+L++RIY+GK  A     +      SP+  LPTA   YA I DP  V
Sbjct: 1   MSEEFALRVEQGLQLARRIYYGKGIAPP---VVPDPPSSPENFLPTAITAYASITDPVAV 57

Query: 61  DNPDIPSYQPHVYGRCDPPALIPLQMNGVEMEIDCYLDTAFVTVSGSWRLHCVMGSRACD 120
           DNPD+PSYQP+V+ RCDP AL+PLQM G+EM IDC+LDTAFVTV+G WR+HCV  S+  D
Sbjct: 58  DNPDVPSYQPYVHARCDPSALVPLQMLGIEMNIDCWLDTAFVTVTGRWRVHCVRPSKRFD 117

Query: 121 CRIAIPMGHQGSILGVE--VTAHRKTYSTQLVVMEDNSVNENATIAQQGGFLKSNIFTLT 178
           C + +PMG +GS LG E  V  + K+Y T+LV  ++ S  +N    +   F KS+I+T  
Sbjct: 118 CCVGVPMGEKGSFLGAEIDVLNNEKSYQTKLVTEDETSDFDNVHKDKDSRFFKSHIYTFK 177

Query: 179 VPQIDGGTNLSIKIQWSQKIVNCNGELTLNVPFTFPEFVTPAGKKMSKKEKIQINVEA-V 237
           +P + GG+  S+ + WSQK++  +G+  LNVPF FP +V P GK++ K+EKI +N+ + V
Sbjct: 178 IPHVAGGSIFSVNVTWSQKLIYKDGKFHLNVPFRFPSYVNPIGKEIIKREKIVLNMNSCV 237

Query: 238 AGSELLCRTMSHPLKEMRRDAGSIGFLYDSQVLSWSNTDFSFSYAVSSSRIDGGVLLQSA 297
           +G E+     SHPLK + R AG +   Y+++V SWS  DF  S+ VSS  + G VL++S 
Sbjct: 238 SGGEIASSFTSHPLKIIHRVAGELSCEYEAEVPSWSRVDFGVSFTVSSGDLCGNVLVKSP 297

Query: 298 SVHDFDQREMFYMYLSPGDIHRKKVFRKDIIFVIDISGSMQGKLIDDTKNALSSALSKLN 357
           S  D D R +F +YL PG     K+F++ ++FVIDIS SM+ K ++D K AL   L+KL 
Sbjct: 298 SPWDSDDRGIFCLYLFPGTTKHTKLFKRRVVFVIDISASMKWKPLEDVKKALLECLAKLQ 357

Query: 358 PDDSFNIIAFNGESFLFS 375
            +D FNIIAFN E   FS
Sbjct: 358 AEDVFNIIAFNDEILEFS 375