Miyakogusa Predicted Gene

Lj5g3v1737120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1737120.1 tr|A9RWY7|A9RWY7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_71628
,43.08,2e-18,MYOTUBULARIN-RELATED,NULL; domain in
glucosyltransferases, myotubularin,GRAM; seg,NULL,CUFF.55840.1
         (142 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10550.1 | Symbols: MTM1, AtMTM1 | Myotubularin-like phosphat...   186   4e-48
AT5G04540.1 | Symbols:  | Myotubularin-like phosphatases II supe...   162   9e-41

>AT3G10550.1 | Symbols: MTM1, AtMTM1 | Myotubularin-like
           phosphatases II superfamily | chr3:3293210-3298452
           REVERSE LENGTH=840
          Length = 840

 Score =  186 bits (473), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 87/120 (72%), Positives = 102/120 (85%)

Query: 23  GSWDVLEWTKIEPISQFASHENLDFLLEAEQVVAEGHGVVLVNTDDAGMLMVTNFRLLFL 82
           GSWD LEWTK++  S   S  NL  LLE+E+V+ EG+GVVL+NTD+AG L+VTNFR+LFL
Sbjct: 28  GSWDTLEWTKLDSTSGSGSFSNLSCLLESERVIVEGYGVVLINTDEAGTLLVTNFRILFL 87

Query: 83  SEGTRKVIALGTIPLATIEKFNKIVVKVQSNTRQLDKTPTQRLLQVIGKDMRIIVFGFRP 142
           SEGTRKVI LGTIPLATIEKFNK+V+KVQS+ RQ DK P +RLLQV GKDMRIIV+GFRP
Sbjct: 88  SEGTRKVIPLGTIPLATIEKFNKMVLKVQSSPRQSDKIPPRRLLQVTGKDMRIIVYGFRP 147


>AT5G04540.1 | Symbols:  | Myotubularin-like phosphatases II
           superfamily | chr5:1296826-1302299 REVERSE LENGTH=833
          Length = 833

 Score =  162 bits (409), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 73/120 (60%), Positives = 94/120 (78%)

Query: 23  GSWDVLEWTKIEPISQFASHENLDFLLEAEQVVAEGHGVVLVNTDDAGMLMVTNFRLLFL 82
           GSWDVLEWTK++  S   S+ NLD LLE+E+++ E  GV+L+NTD+AG L+++NFR+LFL
Sbjct: 25  GSWDVLEWTKLDSASWSGSYSNLDCLLESERIIFEACGVILINTDEAGTLLLSNFRILFL 84

Query: 83  SEGTRKVIALGTIPLATIEKFNKIVVKVQSNTRQLDKTPTQRLLQVIGKDMRIIVFGFRP 142
           SEGTRK++ LGTIP   IEKFNK+  KVQSN    ++    RLLQV GKDMRI+V+GFRP
Sbjct: 85  SEGTRKLVPLGTIPFVAIEKFNKLAPKVQSNKYHNNENAPTRLLQVTGKDMRIVVYGFRP 144