Miyakogusa Predicted Gene

Lj5g3v1699200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1699200.1 Non Chatacterized Hit- tr|I1LCN7|I1LCN7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8642
PE=,97.05,0,COATOMER ALPHA SUBUNIT,NULL; COATOMER,NULL;
Coatomer_WDAD,Coatomer, WD associated
region,NODE_57458_length_931_cov_287.438232.path2.1
         (237 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G62020.1 | Symbols:  | Coatomer, alpha subunit | chr1:2291981...   449   e-127
AT2G21390.1 | Symbols:  | Coatomer, alpha subunit | chr2:9152428...   445   e-125
AT1G52360.2 | Symbols:  | Coatomer, beta' subunit | chr1:1949942...    51   6e-07
AT1G52360.1 | Symbols:  | Coatomer, beta' subunit | chr1:1949928...    51   8e-07
AT3G15980.5 | Symbols:  | Coatomer, beta' subunit | chr3:5412015...    48   5e-06
AT3G15980.1 | Symbols:  | Coatomer, beta' subunit | chr3:5411699...    48   5e-06
AT3G15980.4 | Symbols:  | Coatomer, beta' subunit | chr3:5411699...    48   6e-06
AT3G15980.3 | Symbols:  | Coatomer, beta' subunit | chr3:5412015...    48   6e-06
AT3G15980.2 | Symbols:  | Coatomer, beta' subunit | chr3:5412015...    48   6e-06

>AT1G62020.1 | Symbols:  | Coatomer, alpha subunit |
           chr1:22919814-22923728 FORWARD LENGTH=1216
          Length = 1216

 Score =  449 bits (1154), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 210/237 (88%), Positives = 230/237 (97%)

Query: 1   MENVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDNG 60
           ME+VALLSKH IIIASKKLV QCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGD+G
Sbjct: 502 MESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSG 561

Query: 61  IIKTLDIPIYITKVSGNTIFCLDRDGKSRTIIIDATEYIFKLSLLKKRYDHVMNMIRNSQ 120
           II+TLD+PIYITKVSGNTIFCLDRDGK++ I I+ATEYIFKLSLL+KRYDHVM+MI+NSQ
Sbjct: 562 IIRTLDVPIYITKVSGNTIFCLDRDGKNKAITINATEYIFKLSLLRKRYDHVMSMIKNSQ 621

Query: 121 LCGQAMIAYLQQKGFPEVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGV 180
           LCGQAMIAYLQQKGFPEVALHFV+DERIRFNLALESGNI +AVASAT I+EKDHWYRLGV
Sbjct: 622 LCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNISVAVASATQINEKDHWYRLGV 681

Query: 181 EALRQGNAGIVEYAYQRTKNFERLSFLYLITGNKEKLSKMLKIAEVKNDVMGQFHNA 237
           EALRQGN+GIVE+AYQ+TKNFERLSFLYLITGN +KLSK++KIAEVKN+VMGQFHNA
Sbjct: 682 EALRQGNSGIVEFAYQQTKNFERLSFLYLITGNLDKLSKLMKIAEVKNNVMGQFHNA 738


>AT2G21390.1 | Symbols:  | Coatomer, alpha subunit |
           chr2:9152428-9156577 FORWARD LENGTH=1218
          Length = 1218

 Score =  445 bits (1144), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 208/237 (87%), Positives = 229/237 (96%)

Query: 1   MENVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDNG 60
           ME+VALLSKH IIIASKKLV QCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGD+G
Sbjct: 502 MESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSG 561

Query: 61  IIKTLDIPIYITKVSGNTIFCLDRDGKSRTIIIDATEYIFKLSLLKKRYDHVMNMIRNSQ 120
           II+TLD+PIYITKVSGNTIFCLDRDGK+R I I+ATEYIFKL+LL+K+YDHVM+MI+NSQ
Sbjct: 562 IIRTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYIFKLALLRKKYDHVMSMIKNSQ 621

Query: 121 LCGQAMIAYLQQKGFPEVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGV 180
           LCGQAMIAYLQQKGFPEVALHFV+DERIRFNLALESGNI +AVASAT I+EKDHWYRLGV
Sbjct: 622 LCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNISVAVASATEINEKDHWYRLGV 681

Query: 181 EALRQGNAGIVEYAYQRTKNFERLSFLYLITGNKEKLSKMLKIAEVKNDVMGQFHNA 237
           EALRQGN+ IVE+AYQ+TKNFERLSFLYLITGN +KLSK++KIAEVKN+VMGQFHNA
Sbjct: 682 EALRQGNSRIVEFAYQQTKNFERLSFLYLITGNLDKLSKLMKIAEVKNNVMGQFHNA 738


>AT1G52360.2 | Symbols:  | Coatomer, beta' subunit |
           chr1:19499420-19505397 FORWARD LENGTH=970
          Length = 970

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 17/217 (7%)

Query: 25  LHETI-RVKSGAWDDNGVFIYTTLN-HIKYCLPNGDNGIIKTLDIPIYITK--VSGNTIF 80
           LHE   RV++G W  +  FIY   +  + YC+  G+   +  LD P+Y+     S + +F
Sbjct: 562 LHENDERVRTGIWVGD-CFIYNNSSWKLNYCV-GGEVTTMYHLDRPMYLLGYLASQSRVF 619

Query: 81  CLDRDGK--SRTIIIDATEYIFKLSLLKKRYD---HVMNMIRNSQLCGQAMIAYLQQKGF 135
            +D++      T+++   EY  K  +++   D    ++  I   Q    ++  +L+ +G 
Sbjct: 620 LVDKEFNVIGYTLLLSLIEY--KTLVMRGDLDKASEILPTIPKDQ--HNSVAHFLESRGM 675

Query: 136 PEVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAY 195
            E AL    D   RF LA++ G ++IA   A  +  +  W +LG  A+  G   + E   
Sbjct: 676 IEDALEIATDPDYRFELAIQLGRLEIAQEIAVEVQSESKWKQLGELAMSSGKLQMAEECM 735

Query: 196 QRTKNFERLSFLYLITGNKEKLSKMLKIA--EVKNDV 230
           +   +   L  LY   G+ E ++K+  +A  + KN+V
Sbjct: 736 KYAMDLSGLLLLYSSLGDAEGVTKLATLAKEQGKNNV 772


>AT1G52360.1 | Symbols:  | Coatomer, beta' subunit |
           chr1:19499282-19505397 FORWARD LENGTH=926
          Length = 926

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 17/217 (7%)

Query: 25  LHETI-RVKSGAWDDNGVFIYTTLN-HIKYCLPNGDNGIIKTLDIPIYITK--VSGNTIF 80
           LHE   RV++G W  +  FIY   +  + YC+  G+   +  LD P+Y+     S + +F
Sbjct: 518 LHENDERVRTGIWVGD-CFIYNNSSWKLNYCV-GGEVTTMYHLDRPMYLLGYLASQSRVF 575

Query: 81  CLDRDGK--SRTIIIDATEYIFKLSLLKKRYD---HVMNMIRNSQLCGQAMIAYLQQKGF 135
            +D++      T+++   EY  K  +++   D    ++  I   Q    ++  +L+ +G 
Sbjct: 576 LVDKEFNVIGYTLLLSLIEY--KTLVMRGDLDKASEILPTIPKDQ--HNSVAHFLESRGM 631

Query: 136 PEVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAY 195
            E AL    D   RF LA++ G ++IA   A  +  +  W +LG  A+  G   + E   
Sbjct: 632 IEDALEIATDPDYRFELAIQLGRLEIAQEIAVEVQSESKWKQLGELAMSSGKLQMAEECM 691

Query: 196 QRTKNFERLSFLYLITGNKEKLSKMLKIA--EVKNDV 230
           +   +   L  LY   G+ E ++K+  +A  + KN+V
Sbjct: 692 KYAMDLSGLLLLYSSLGDAEGVTKLATLAKEQGKNNV 728


>AT3G15980.5 | Symbols:  | Coatomer, beta' subunit |
           chr3:5412015-5418313 REVERSE LENGTH=930
          Length = 930

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 15/177 (8%)

Query: 25  LHETI-RVKSGAWDDNGVFIYTTLN-HIKYCLPNGDNGIIKTLDIPIYITKVSGNT--IF 80
           LHE   RV++G W  +  FIY   +  + YC+  G+   +  LD P+Y+     N   ++
Sbjct: 530 LHENDERVRTGIWVGD-CFIYNNSSWKLNYCV-GGEVTTMYHLDRPMYLLGYIANQSRVY 587

Query: 81  CLDRDGK--SRTIIIDATEYIFKLSLLK---KRYDHVMNMIRNSQLCGQAMIAYLQQKGF 135
            +D++      T+++   EY  K  +++    R + ++  I   Q    A   +L+ +G 
Sbjct: 588 LVDKEFNVIGYTLLLSLIEY--KTLVMRGDLDRANQILPTIPKEQHNNVAH--FLESRGM 643

Query: 136 PEVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVE 192
            E AL    D   +F+LA++ G ++IA   A  +  +  W +LG  A+  G   + E
Sbjct: 644 IEDALEIATDPDYKFDLAIQLGRLEIAKEIAEEVQSESKWKQLGELAMSSGKLQLAE 700


>AT3G15980.1 | Symbols:  | Coatomer, beta' subunit |
           chr3:5411699-5418313 REVERSE LENGTH=909
          Length = 909

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 15/177 (8%)

Query: 25  LHETI-RVKSGAWDDNGVFIYTTLN-HIKYCLPNGDNGIIKTLDIPIYITKVSGNT--IF 80
           LHE   RV++G W  +  FIY   +  + YC+  G+   +  LD P+Y+     N   ++
Sbjct: 518 LHENDERVRTGIWVGD-CFIYNNSSWKLNYCV-GGEVTTMYHLDRPMYLLGYIANQSRVY 575

Query: 81  CLDRDGK--SRTIIIDATEYIFKLSLLK---KRYDHVMNMIRNSQLCGQAMIAYLQQKGF 135
            +D++      T+++   EY  K  +++    R + ++  I   Q    A   +L+ +G 
Sbjct: 576 LVDKEFNVIGYTLLLSLIEY--KTLVMRGDLDRANQILPTIPKEQHNNVAH--FLESRGM 631

Query: 136 PEVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVE 192
            E AL    D   +F+LA++ G ++IA   A  +  +  W +LG  A+  G   + E
Sbjct: 632 IEDALEIATDPDYKFDLAIQLGRLEIAKEIAEEVQSESKWKQLGELAMSSGKLQLAE 688


>AT3G15980.4 | Symbols:  | Coatomer, beta' subunit |
           chr3:5411699-5418313 REVERSE LENGTH=914
          Length = 914

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 17/217 (7%)

Query: 25  LHETI-RVKSGAWDDNGVFIYTTLN-HIKYCLPNGDNGIIKTLDIPIYITKVSGNT--IF 80
           LHE   RV++G W  +  FIY   +  + YC+  G+   +  LD P+Y+     N   ++
Sbjct: 518 LHENDERVRTGIWVGD-CFIYNNSSWKLNYCV-GGEVTTMYHLDRPMYLLGYIANQSRVY 575

Query: 81  CLDRDGK--SRTIIIDATEYIFKLSLLK---KRYDHVMNMIRNSQLCGQAMIAYLQQKGF 135
            +D++      T+++   EY  K  +++    R + ++  I   Q    A   +L+ +G 
Sbjct: 576 LVDKEFNVIGYTLLLSLIEY--KTLVMRGDLDRANQILPTIPKEQHNNVAH--FLESRGM 631

Query: 136 PEVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAY 195
            E AL    D   +F+LA++ G ++IA   A  +  +  W +LG  A+  G   + E   
Sbjct: 632 IEDALEIATDPDYKFDLAIQLGRLEIAKEIAEEVQSESKWKQLGELAMSSGKLQLAEDCM 691

Query: 196 QRTKNFERLSFLYLITGNKEKLSKMLKIA--EVKNDV 230
           +   +   L  LY   G+ E +SK+  +A  + KN+V
Sbjct: 692 KYAMDLSGLLLLYSSLGDAEGVSKLACLAKEQGKNNV 728


>AT3G15980.3 | Symbols:  | Coatomer, beta' subunit |
           chr3:5412015-5418313 REVERSE LENGTH=918
          Length = 918

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 17/217 (7%)

Query: 25  LHETI-RVKSGAWDDNGVFIYTTLN-HIKYCLPNGDNGIIKTLDIPIYITKVSGNT--IF 80
           LHE   RV++G W  +  FIY   +  + YC+  G+   +  LD P+Y+     N   ++
Sbjct: 518 LHENDERVRTGIWVGD-CFIYNNSSWKLNYCV-GGEVTTMYHLDRPMYLLGYIANQSRVY 575

Query: 81  CLDRDGK--SRTIIIDATEYIFKLSLLK---KRYDHVMNMIRNSQLCGQAMIAYLQQKGF 135
            +D++      T+++   EY  K  +++    R + ++  I   Q    A   +L+ +G 
Sbjct: 576 LVDKEFNVIGYTLLLSLIEY--KTLVMRGDLDRANQILPTIPKEQHNNVAH--FLESRGM 631

Query: 136 PEVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAY 195
            E AL    D   +F+LA++ G ++IA   A  +  +  W +LG  A+  G   + E   
Sbjct: 632 IEDALEIATDPDYKFDLAIQLGRLEIAKEIAEEVQSESKWKQLGELAMSSGKLQLAEDCM 691

Query: 196 QRTKNFERLSFLYLITGNKEKLSKMLKIA--EVKNDV 230
           +   +   L  LY   G+ E +SK+  +A  + KN+V
Sbjct: 692 KYAMDLSGLLLLYSSLGDAEGVSKLACLAKEQGKNNV 728


>AT3G15980.2 | Symbols:  | Coatomer, beta' subunit |
           chr3:5412015-5418313 REVERSE LENGTH=918
          Length = 918

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 17/217 (7%)

Query: 25  LHETI-RVKSGAWDDNGVFIYTTLN-HIKYCLPNGDNGIIKTLDIPIYITKVSGNT--IF 80
           LHE   RV++G W  +  FIY   +  + YC+  G+   +  LD P+Y+     N   ++
Sbjct: 518 LHENDERVRTGIWVGD-CFIYNNSSWKLNYCV-GGEVTTMYHLDRPMYLLGYIANQSRVY 575

Query: 81  CLDRDGK--SRTIIIDATEYIFKLSLLK---KRYDHVMNMIRNSQLCGQAMIAYLQQKGF 135
            +D++      T+++   EY  K  +++    R + ++  I   Q    A   +L+ +G 
Sbjct: 576 LVDKEFNVIGYTLLLSLIEY--KTLVMRGDLDRANQILPTIPKEQHNNVAH--FLESRGM 631

Query: 136 PEVALHFVKDERIRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAY 195
            E AL    D   +F+LA++ G ++IA   A  +  +  W +LG  A+  G   + E   
Sbjct: 632 IEDALEIATDPDYKFDLAIQLGRLEIAKEIAEEVQSESKWKQLGELAMSSGKLQLAEDCM 691

Query: 196 QRTKNFERLSFLYLITGNKEKLSKMLKIA--EVKNDV 230
           +   +   L  LY   G+ E +SK+  +A  + KN+V
Sbjct: 692 KYAMDLSGLLLLYSSLGDAEGVSKLACLAKEQGKNNV 728