Miyakogusa Predicted Gene

Lj5g3v1699010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1699010.1 Non Chatacterized Hit- tr|I1LCM6|I1LCM6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55222
PE,85.77,0,SUBFAMILY NOT NAMED,NULL; MALATE DEHYDROGENASE,Malate
dehydrogenase, type 2; NAD(P)-binding
Rossmann,NODE_34460_length_747_cov_364.220886.path1.1
         (239 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58330.2 | Symbols:  | lactate/malate dehydrogenase family pr...   332   2e-91
AT5G58330.1 | Symbols:  | lactate/malate dehydrogenase family pr...   328   1e-90
AT5G58330.3 | Symbols:  | lactate/malate dehydrogenase family pr...   249   9e-67
AT5G56720.1 | Symbols:  | Lactate/malate dehydrogenase family pr...   114   8e-26
AT5G43330.1 | Symbols:  | Lactate/malate dehydrogenase family pr...   112   2e-25
AT1G04410.1 | Symbols:  | Lactate/malate dehydrogenase family pr...   110   6e-25

>AT5G58330.2 | Symbols:  | lactate/malate dehydrogenase family
           protein | chr5:23580010-23582287 REVERSE LENGTH=442
          Length = 442

 Score =  332 bits (851), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 166/203 (81%), Positives = 176/203 (86%)

Query: 37  LPQRTQHASISCSVAPNEVQVPAVQTLDSKGKPECYGVFCLTYDLKAEEETVSWKKLINI 96
           L   T ++ ISCSV+ N+  V   +    K K ECYGVFCLTYDLKAEEET SWKKLINI
Sbjct: 42  LHTTTPNSKISCSVSQNQAPVAVQENGLVKTKKECYGVFCLTYDLKAEEETRSWKKLINI 101

Query: 97  AVSGAAGMISNHLLFKLASGEVFGPNQPIALKLLGSERSFQALEGVAMELEDSLFPLLRE 156
           AVSGAAGMISNHLLFKLASGEVFGP+QPIALKLLGSERS QALEGVAMELEDSLFPLLRE
Sbjct: 102 AVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPLLRE 161

Query: 157 VSIGIDSYEVFQDADWALLIGAKPRGPGMERADLLDINGKIFAEQGKALNAVASRNVKVI 216
           V IG D  EVFQD +WA+LIGAKPRGPGMERADLLDING+IFAEQGKALN  AS NVKV+
Sbjct: 162 VDIGTDPNEVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAASPNVKVL 221

Query: 217 VVGNPCNTNALICLKNAPNIPAK 239
           VVGNPCNTNALICLKNAPNIPAK
Sbjct: 222 VVGNPCNTNALICLKNAPNIPAK 244


>AT5G58330.1 | Symbols:  | lactate/malate dehydrogenase family
           protein | chr5:23580010-23582287 REVERSE LENGTH=443
          Length = 443

 Score =  328 bits (842), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 168/204 (82%), Positives = 176/204 (86%), Gaps = 1/204 (0%)

Query: 37  LPQRTQHASISCSVAPNEVQVPAVQTLD-SKGKPECYGVFCLTYDLKAEEETVSWKKLIN 95
           L   T ++ ISCSV+ N     AVQ     K K ECYGVFCLTYDLKAEEET SWKKLIN
Sbjct: 42  LHTTTPNSKISCSVSQNSQAPVAVQENGLVKTKKECYGVFCLTYDLKAEEETRSWKKLIN 101

Query: 96  IAVSGAAGMISNHLLFKLASGEVFGPNQPIALKLLGSERSFQALEGVAMELEDSLFPLLR 155
           IAVSGAAGMISNHLLFKLASGEVFGP+QPIALKLLGSERS QALEGVAMELEDSLFPLLR
Sbjct: 102 IAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPLLR 161

Query: 156 EVSIGIDSYEVFQDADWALLIGAKPRGPGMERADLLDINGKIFAEQGKALNAVASRNVKV 215
           EV IG D  EVFQD +WA+LIGAKPRGPGMERADLLDING+IFAEQGKALN  AS NVKV
Sbjct: 162 EVDIGTDPNEVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAASPNVKV 221

Query: 216 IVVGNPCNTNALICLKNAPNIPAK 239
           +VVGNPCNTNALICLKNAPNIPAK
Sbjct: 222 LVVGNPCNTNALICLKNAPNIPAK 245


>AT5G58330.3 | Symbols:  | lactate/malate dehydrogenase family
           protein | chr5:23580010-23581751 REVERSE LENGTH=334
          Length = 334

 Score =  249 bits (637), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 122/136 (89%), Positives = 127/136 (93%)

Query: 104 MISNHLLFKLASGEVFGPNQPIALKLLGSERSFQALEGVAMELEDSLFPLLREVSIGIDS 163
           MISNHLLFKLASGEVFGP+QPIALKLLGSERS QALEGVAMELEDSLFPLLREV IG D 
Sbjct: 1   MISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPLLREVDIGTDP 60

Query: 164 YEVFQDADWALLIGAKPRGPGMERADLLDINGKIFAEQGKALNAVASRNVKVIVVGNPCN 223
            EVFQD +WA+LIGAKPRGPGMERADLLDING+IFAEQGKALN  AS NVKV+VVGNPCN
Sbjct: 61  NEVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAASPNVKVLVVGNPCN 120

Query: 224 TNALICLKNAPNIPAK 239
           TNALICLKNAPNIPAK
Sbjct: 121 TNALICLKNAPNIPAK 136


>AT5G56720.1 | Symbols:  | Lactate/malate dehydrogenase family
           protein | chr5:22945537-22946718 FORWARD LENGTH=339
          Length = 339

 Score =  114 bits (284), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 64/147 (43%), Positives = 88/147 (59%)

Query: 91  KKLINIAVSGAAGMISNHLLFKLASGEVFGPNQPIALKLLGSERSFQALEGVAMELEDSL 150
           K  I + ++GAAG I   +   +A G + GP+QP+ L LL  E +  +LE V MEL+DS 
Sbjct: 9   KDPIRVLITGAAGNIGYAIAPMIARGIMLGPDQPMILHLLDIEPASSSLEAVKMELQDSA 68

Query: 151 FPLLREVSIGIDSYEVFQDADWALLIGAKPRGPGMERADLLDINGKIFAEQGKALNAVAS 210
           FPLL+ V    +  E  +D +  ++IG  PR  GMER D++  N  I+  Q  AL   AS
Sbjct: 69  FPLLKGVIATTNVVEACKDVNIVIMIGGFPRIAGMERKDVMSKNVVIYKAQASALERYAS 128

Query: 211 RNVKVIVVGNPCNTNALICLKNAPNIP 237
            + KV+VV NP NTNALI  + AP+IP
Sbjct: 129 DDCKVLVVANPANTNALILKEFAPSIP 155


>AT5G43330.1 | Symbols:  | Lactate/malate dehydrogenase family
           protein | chr5:17390552-17392449 FORWARD LENGTH=332
          Length = 332

 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 89/149 (59%)

Query: 91  KKLINIAVSGAAGMISNHLLFKLASGEVFGPNQPIALKLLGSERSFQALEGVAMELEDSL 150
           K+ + + V+GAAG I   L+  +A G + G +QP+ L +L    + +AL GV MEL D+ 
Sbjct: 3   KEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVDAA 62

Query: 151 FPLLREVSIGIDSYEVFQDADWALLIGAKPRGPGMERADLLDINGKIFAEQGKALNAVAS 210
           FPLL+ V    D+ E     + A+++G  PR  GMER D++  N  I+  Q  AL   A+
Sbjct: 63  FPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAA 122

Query: 211 RNVKVIVVGNPCNTNALICLKNAPNIPAK 239
            N KV+VV NP NTNALI  + AP+IP K
Sbjct: 123 PNCKVLVVANPANTNALILKEFAPSIPEK 151


>AT1G04410.1 | Symbols:  | Lactate/malate dehydrogenase family
           protein | chr1:1189418-1191267 REVERSE LENGTH=332
          Length = 332

 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 89/149 (59%)

Query: 91  KKLINIAVSGAAGMISNHLLFKLASGEVFGPNQPIALKLLGSERSFQALEGVAMELEDSL 150
           K+ + + V+GAAG I   L+  +A G + G +QP+ L +L    + +AL GV MEL D+ 
Sbjct: 3   KEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELIDAA 62

Query: 151 FPLLREVSIGIDSYEVFQDADWALLIGAKPRGPGMERADLLDINGKIFAEQGKALNAVAS 210
           FPLL+ V    D+ E     + A+++G  PR  GMER D++  N  I+  Q  AL   A+
Sbjct: 63  FPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKHAA 122

Query: 211 RNVKVIVVGNPCNTNALICLKNAPNIPAK 239
            N KV+VV NP NTNALI  + AP+IP K
Sbjct: 123 PNCKVLVVANPANTNALILKEFAPSIPEK 151