Miyakogusa Predicted Gene

Lj5g3v1697840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1697840.1 Non Chatacterized Hit- tr|D7TM48|D7TM48_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,50.43,3e-18,coiled-coil,NULL; Shugoshin_C,Shugoshin, C-terminal;
seg,NULL,CUFF.55777.1
         (402 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G04320.2 | Symbols:  | Shugoshin C terminus | chr5:1209613-12...    91   1e-18
AT5G04320.1 | Symbols:  | Shugoshin C terminus | chr5:1209929-12...    87   2e-17
AT3G10440.1 | Symbols:  | Shugoshin C terminus | chr3:3245376-32...    76   4e-14

>AT5G04320.2 | Symbols:  | Shugoshin C terminus |
           chr5:1209613-1212376 FORWARD LENGTH=470
          Length = 470

 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 139/266 (52%), Gaps = 38/266 (14%)

Query: 80  QLLNENAMLMKVLANRNAVIESCKAELQKSQTNYLRLRKENSELALTNTHIMAELNSSKQ 139
           +L  EN  LMK LA+RN ++E    E+QK + N   ++++N +LA  N+ ++AELN+++ 
Sbjct: 46  KLQKENMTLMKALAHRNKLVELSGIEIQKLRINLRSVQEKNLQLAQANSQMLAELNTNRD 105

Query: 140 RLRELQHELGMKNGMLRAMK-LE--LTAKEHTEKSNREIEANEVKASHSKELDQTLQ-ED 195
           RL++LQHELG KN +L+  K LE  +  + H E  ++      V AS S    ++ Q  D
Sbjct: 106 RLKDLQHELGCKNALLKVKKHLEEQVLPRTHHESKDK------VSASASDGDCKSFQVHD 159

Query: 196 AREK-TKRKRVSRSQSSAPAVIKQVKSIEKVENKRYSLRRQSAGLQAEKSQPTEDSEVAQ 254
            + K TKRKR +R +SS  A +K +   +   N + + +R+ +G+      P    E+ Q
Sbjct: 160 IKHKDTKRKRTTRIKSSVSADVKPIPVND--SNSKANRKRRVSGVIDTTGIP---EEICQ 214

Query: 255 VKYDVAHLQENLENENGPTSSEVHEEA------KEDAESSGPANTEQVHAKKNIENKRQS 308
            + D+         + G  S  V+++       K   +++ P        K+++  KRQ 
Sbjct: 215 TEDDI---------DKGVVSRGVNQDIDNVVNKKFVPDAANP-------VKESVHRKRQC 258

Query: 309 LRRQSSMFKPENLEPTEDFFEVDDAK 334
            RRQS+ F  +  + TE   E+D AK
Sbjct: 259 TRRQSTRFDVQETKQTEKLLEMDGAK 284


>AT5G04320.1 | Symbols:  | Shugoshin C terminus |
           chr5:1209929-1212376 FORWARD LENGTH=419
          Length = 419

 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 135/258 (52%), Gaps = 38/258 (14%)

Query: 88  LMKVLANRNAVIESCKAELQKSQTNYLRLRKENSELALTNTHIMAELNSSKQRLRELQHE 147
           LMK LA+RN ++E    E+QK + N   ++++N +LA  N+ ++AELN+++ RL++LQHE
Sbjct: 3   LMKALAHRNKLVELSGIEIQKLRINLRSVQEKNLQLAQANSQMLAELNTNRDRLKDLQHE 62

Query: 148 LGMKNGMLRAMK-LE--LTAKEHTEKSNREIEANEVKASHSKELDQTLQ-EDAREK-TKR 202
           LG KN +L+  K LE  +  + H E  ++      V AS S    ++ Q  D + K TKR
Sbjct: 63  LGCKNALLKVKKHLEEQVLPRTHHESKDK------VSASASDGDCKSFQVHDIKHKDTKR 116

Query: 203 KRVSRSQSSAPAVIKQVKSIEKVENKRYSLRRQSAGLQAEKSQPTEDSEVAQVKYDVAHL 262
           KR +R +SS  A +K +   +   N + + +R+ +G+      P    E+ Q + D+   
Sbjct: 117 KRTTRIKSSVSADVKPIPVND--SNSKANRKRRVSGVIDTTGIP---EEICQTEDDI--- 168

Query: 263 QENLENENGPTSSEVHEEA------KEDAESSGPANTEQVHAKKNIENKRQSLRRQSSMF 316
                 + G  S  V+++       K   +++ P        K+++  KRQ  RRQS+ F
Sbjct: 169 ------DKGVVSRGVNQDIDNVVNKKFVPDAANP-------VKESVHRKRQCTRRQSTRF 215

Query: 317 KPENLEPTEDFFEVDDAK 334
             +  + TE   E+D AK
Sbjct: 216 DVQETKQTEKLLEMDGAK 233


>AT3G10440.1 | Symbols:  | Shugoshin C terminus |
           chr3:3245376-3248987 FORWARD LENGTH=572
          Length = 572

 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 45/319 (14%)

Query: 20  GVAGQKAKRGKMVKGDSVSVGTAQKKKLADITN-RDQQQRPXXXXXXXXXXXXXXPGITS 78
           GV   KAK  KMV      + +AQ++KL DITN ++Q+                     +
Sbjct: 16  GVRTNKAKGEKMVL--EPPMNSAQRRKLGDITNLQNQKNLMNQGAKHQQQAILISSKENA 73

Query: 79  DQLLNENAMLMKVLANRNAVIESCKAELQKSQTNYLRLRKENSELALTNTHIMAELNSSK 138
           + L  EN  LMKV+  R+ +    K++L+K +  + +++++N  LA  NT I+AE N+SK
Sbjct: 74  ENLQKENTKLMKVVMERDGI----KSDLKKLRIEFQKVQEQNLLLAQANTRILAEFNTSK 129

Query: 139 QRLRELQHELGMKNGMLRAMKLELTAKEHTEKSNREIEANEVKASHSKELDQTLQEDARE 198
            +L+ LQHELG KNG++ A K+ L  KE T    R     + +A+      +T Q +   
Sbjct: 130 DQLKVLQHELGCKNGLVMARKMLL--KEQTLPCTRHASKVKAQANACGGACKTFQPND-- 185

Query: 199 KTKRKRVSRSQSSAPAVIKQVKSIEKVENKRYSLRRQSAGLQAEKSQPTEDSEVAQV--- 255
                      +S  +    ++  EK  +KR    R++            +SEV  +   
Sbjct: 186 ------ADHEHASGSSNANSLQRNEKANSKRRVSGRKNPA----------NSEVLDIIGR 229

Query: 256 KYDVAHLQENLENENGPTSSEVHEEAKEDAESSGPANTEQVHAKKNIENKRQSLRRQSSM 315
             +   +++N++N+      ++  ++  DAE+         H   N+++KR    RQSS 
Sbjct: 230 SGETCQMEDNIDNK------KLVSDSDNDAEN---------HINDNVQSKRYCAGRQSSS 274

Query: 316 FKPENLEPTEDFFEVDDAK 334
            K      TE   +V DAK
Sbjct: 275 SKTREASQTETLQKVVDAK 293