Miyakogusa Predicted Gene
- Lj5g3v1697410.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1697410.1 Non Chatacterized Hit- tr|D7T3A6|D7T3A6_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,79.89,0,no
description,TRAF-type; coiled-coil,NULL; MATH,MATH; UCH_2_3,Peptidase
C19, ubiquitin carboxyl-ter,CUFF.55748.1
(1127 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 1706 0.0
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 1706 0.0
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 1701 0.0
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 1701 0.0
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 1487 0.0
AT3G58250.1 | Symbols: | TRAF-like family protein | chr3:215707... 132 1e-30
AT3G58270.2 | Symbols: | Arabidopsis phospholipase-like protein... 126 7e-29
AT3G58270.1 | Symbols: | Arabidopsis phospholipase-like protein... 126 7e-29
AT3G58210.1 | Symbols: | TRAF-like family protein | chr3:215626... 115 2e-25
AT3G58340.1 | Symbols: | TRAF-like family protein | chr3:215890... 107 4e-23
AT3G58360.1 | Symbols: | TRAF-like family protein | chr3:215935... 106 9e-23
AT3G58260.1 | Symbols: | TRAF-like family protein | chr3:215737... 103 8e-22
AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 | chr3:2... 99 1e-20
AT3G27040.1 | Symbols: | Meprin and TRAF (MATH) homology domain... 99 2e-20
AT3G58410.1 | Symbols: | TRAF-like family protein | chr3:216048... 99 2e-20
AT3G58200.1 | Symbols: | TRAF-like family protein | chr3:215600... 96 2e-19
AT2G05420.1 | Symbols: | TRAF-like family protein | chr2:198390... 95 2e-19
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 94 6e-19
AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domain... 91 6e-18
AT3G58290.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 89 3e-17
AT2G01790.1 | Symbols: | TRAF-like family protein | chr2:341322... 88 3e-17
AT1G04300.1 | Symbols: | TRAF-like superfamily protein | chr1:1... 88 4e-17
AT3G44790.1 | Symbols: | TRAF-like family protein | chr3:163287... 87 8e-17
AT5G52330.1 | Symbols: | TRAF-like superfamily protein | chr5:2... 86 2e-16
AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:112431... 86 2e-16
AT3G17380.1 | Symbols: | TRAF-like family protein | chr3:595024... 85 3e-16
AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:1... 85 4e-16
AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:112452... 83 9e-16
AT2G25320.1 | Symbols: | TRAF-like family protein | chr2:107819... 83 9e-16
AT5G43560.2 | Symbols: | TRAF-like superfamily protein | chr5:1... 82 1e-15
AT5G43560.1 | Symbols: | TRAF-like superfamily protein | chr5:1... 82 1e-15
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 80 1e-14
AT3G58440.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 79 2e-14
AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:215646... 77 6e-14
AT3G58240.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 77 9e-14
AT2G25330.1 | Symbols: | TRAF-like family protein | chr2:107889... 76 1e-13
AT3G58220.1 | Symbols: | TRAF-like family protein | chr3:215651... 76 1e-13
AT1G04300.4 | Symbols: | TRAF-like superfamily protein | chr1:1... 76 2e-13
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 75 2e-13
AT2G32870.1 | Symbols: | TRAF-like family protein | chr2:139449... 75 2e-13
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 74 7e-13
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 73 1e-12
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 72 2e-12
AT2G42460.1 | Symbols: | TRAF-like family protein | chr2:176763... 72 2e-12
AT2G42460.2 | Symbols: | TRAF-like family protein | chr2:176780... 72 2e-12
AT4G09770.2 | Symbols: | TRAF-like family protein | chr4:615453... 72 3e-12
AT4G09770.1 | Symbols: | TRAF-like family protein | chr4:615453... 72 3e-12
AT3G20360.1 | Symbols: | TRAF-like family protein | chr3:709995... 71 4e-12
AT2G32880.1 | Symbols: | TRAF-like family protein | chr2:139489... 71 4e-12
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 70 7e-12
AT5G26320.1 | Symbols: | TRAF-like family protein | chr5:923831... 70 9e-12
AT4G09780.1 | Symbols: | TRAF-like family protein | chr4:615953... 69 2e-11
AT5G26260.1 | Symbols: | TRAF-like family protein | chr5:920049... 69 2e-11
AT2G42480.1 | Symbols: | TRAF-like family protein | chr2:176858... 68 3e-11
AT3G58430.1 | Symbols: | TRAF-like family protein | chr3:216131... 68 3e-11
AT1G58270.1 | Symbols: ZW9 | TRAF-like family protein | chr1:216... 67 6e-11
AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 67 6e-11
AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:197749... 67 6e-11
AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 67 6e-11
AT3G29580.1 | Symbols: | Arabidopsis phospholipase-like protein... 67 9e-11
AT3G28220.1 | Symbols: | TRAF-like family protein | chr3:105244... 66 1e-10
AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:215979... 64 7e-10
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 64 8e-10
AT3G46190.1 | Symbols: | TRAF-like family protein | chr3:169658... 64 8e-10
AT3G58400.1 | Symbols: | TRAF-like family protein | chr3:216026... 63 1e-09
AT3G58290.3 | Symbols: | TRAF-like superfamily protein | chr3:2... 63 1e-09
AT4G01390.1 | Symbols: | TRAF-like family protein | chr4:570242... 62 2e-09
AT3G20370.1 | Symbols: | TRAF-like family protein | chr3:710548... 62 3e-09
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 61 5e-09
AT5G26280.1 | Symbols: | TRAF-like family protein | chr5:920872... 60 1e-08
AT2G42470.1 | Symbols: | TRAF-like family protein | chr2:176798... 59 1e-08
AT5G52330.2 | Symbols: | TRAF-like superfamily protein | chr5:2... 57 9e-08
AT1G65050.1 | Symbols: | TRAF-like superfamily protein | chr1:2... 56 1e-07
AT3G58280.1 | Symbols: | Arabidopsis phospholipase-like protein... 56 2e-07
AT5G26300.1 | Symbols: | TRAF-like family protein | chr5:922932... 55 2e-07
AT4G00780.1 | Symbols: | TRAF-like family protein | chr4:334779... 55 3e-07
AT2G04170.5 | Symbols: | TRAF-like family protein | chr2:141766... 55 4e-07
AT2G04170.4 | Symbols: | TRAF-like family protein | chr2:141740... 54 5e-07
AT2G04170.3 | Symbols: | TRAF-like family protein | chr2:141740... 54 5e-07
AT2G04170.2 | Symbols: | TRAF-like family protein | chr2:141740... 54 6e-07
AT2G04170.1 | Symbols: | TRAF-like family protein | chr2:141740... 54 6e-07
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 54 6e-07
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 54 9e-07
AT1G69660.1 | Symbols: | TRAF-like family protein | chr1:261996... 53 1e-06
AT2G15710.1 | Symbols: | TRAF-like family protein | chr2:684264... 53 1e-06
AT5G26290.1 | Symbols: | TRAF-like family protein | chr5:922607... 52 2e-06
AT3G22080.1 | Symbols: | TRAF-like family protein | chr3:777781... 51 4e-06
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 1706 bits (4419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 820/1101 (74%), Positives = 932/1101 (84%), Gaps = 6/1101 (0%)
Query: 31 MEVPPSDVPEGPQPMD---AQPETTNLFGAPIVDESPSGRFTWTIRNFSR-STKKLYSED 86
M VP D+ EGPQPM+ P T + P D PS +FTWTI F+R +T+K YS+
Sbjct: 16 MLVPNPDLVEGPQPMEVAQTDPAATAVENPPPED-PPSLKFTWTIPMFTRLNTRKHYSDV 74
Query: 87 FYVGGYRWRILIFPKGNNVDQLSLYLDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRK 146
F VGGY+WRILIFPKGNNVD LS+YLD D+A LPYGWSRY+QFSL VVNQ+ + +SIRK
Sbjct: 75 FVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQFSLAVVNQVNNRYSIRK 134
Query: 147 ETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIVEADVAVRKVIDYWSHDSKKET 206
ET HQFNARE DWGFTSFMPL+ELY+P RGY+VNDT ++EA+VAVRKV+DYWS+DSKKET
Sbjct: 135 ETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRKVLDYWSYDSKKET 194
Query: 207 GYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYY 266
G+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P+ SIPLALQSLFYKLQY
Sbjct: 195 GFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYN 254
Query: 267 DSSVATKELTKSFGWDTQDSFLQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMN 326
D+SVATKELTKSFGWDT DSF+QHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMN
Sbjct: 255 DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMN 314
Query: 327 YIECINVDYKSTRKESFYDLQLDVKGCRDVYDSFDKYVEVERLEGDNKYHAEQYGLQEAK 386
YIECINVDYKSTRKESFYDLQLDVKGC+DVY SFDKYVEVERLEGDNKYHAE + LQ+AK
Sbjct: 315 YIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHDLQDAK 374
Query: 387 KGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRGNGKYLSPEADKSIR 446
KGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL+LDLDR +G+YLSP+ADKS+R
Sbjct: 375 KGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGRYLSPDADKSVR 434
Query: 447 NLYXXXXXXXXXXXXXXXXYFAYIRPTLSNEWFKFDDARVTKEDADRALEEQYGGEEELP 506
NLY Y+A+IRPTLS++W+KFDD RVTKED RALEEQYGGEEELP
Sbjct: 435 NLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELP 494
Query: 507 HANPGFNNSPFKFTKYSNAYMLVYIRASDKDKIICSVNEKDIAEHXXXXXXXXXXXXXXX 566
NPGFNN PFKFTKYSNAYMLVYIR SDKDKIIC+V+EKDIAEH
Sbjct: 495 QNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKEDK 554
Query: 567 XXXXXXXHLYTIIKVARDEDLFEQIGKDIFFDLVDHNKVRSFRIQKQMPFLCFKEEVARE 626
HL+T IKVARD+D+ EQIGK+I+FDLVDH KVRSFRIQKQ PF FKEEVA+E
Sbjct: 555 RKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRIQKQTPFQQFKEEVAKE 614
Query: 627 FGIPVQYQRFWVWAKRQNHTFRPNRPLTQLEEERPVGHLREGITKANIADLKLFLEVKVG 686
FG+PVQ QRFW+WAKRQNHT+RPNRPL+ EE + VG +RE KAN A+LKLFLE++ G
Sbjct: 615 FGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASNKANNAELKLFLEIERG 674
Query: 687 QDLQPIPPLERTKEDLLLFFKLYDPLNETLRYVGSFYVKANEKPLDILTRLNQMADFAID 746
D PIPP E+T ED+LLFFKLYDP N LRYVG VK++ KP+DI+ +LN+MA FA D
Sbjct: 675 PDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSKPMDIVGQLNKMAGFAPD 734
Query: 747 EEIDLFEEIKFEPHVMCEPVDKGSTFRFNQLEDGDIICYQKPSKVVSGEQFRYPDIPSFL 806
EEI+LFEEIKFEP VMCE +DK ++FR Q+EDGDIICYQKP + E FRYPD+PSFL
Sbjct: 735 EEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQKPLSIEESE-FRYPDVPSFL 793
Query: 807 EYVHNRQVVRFRYLEKPKEDHFSLELSRINTYDYVVTRVAQHLGLNDPSKIRLTSHNCYS 866
EYV NR++VRFR LEKPKED F++ELS+++TYD VV RVA+ LGL+DPSK+RLTSHNCYS
Sbjct: 794 EYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDVVERVAEKLGLDDPSKLRLTSHNCYS 853
Query: 867 QLPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQCLKTLKIAFHHAAKDEV 926
Q PKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVLDIPLPELQ LKTLK+AFH A KDEV
Sbjct: 854 QQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHSATKDEV 913
Query: 927 AIYTTRLPRQSIVEDVINDLKSKVHLSHPDADLRLLEVFYHKIYKIFSLGEKIENINDQY 986
I+ RLP+QS V DVIN+LK+KV LSH DA+LRLLEVF+HKIYKIF E+IENINDQY
Sbjct: 914 IIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIYKIFPSTERIENINDQY 973
Query: 987 WTLRAEEIPQEEKNLGPEDRLIHVYHFMKDTAHDQQIQNFGDPFFMVIHEGETLADVKLR 1046
WTLRAEEIP+EEKN+GP DRLIHVYHF K+ +QQ+QNFG+PFF+VIHEGETL ++K R
Sbjct: 974 WTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQQVQNFGEPFFLVIHEGETLEEIKTR 1033
Query: 1047 IQKKLNVPDEEFSKWKFAFISLGHPEYLQDSDIVSAQFQRRDIYGAWEQYLGLEHTDNAP 1106
IQKKL+VPDE+F+KWKFA S+G P+YL D+D+V +FQRRD+YGAWEQYLGLEH DNAP
Sbjct: 1034 IQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDVYGAWEQYLGLEHIDNAP 1093
Query: 1107 KRSYIVNQNRHAFDKPVKIYN 1127
KR+Y NQNRHA++KPVKIYN
Sbjct: 1094 KRAYAANQNRHAYEKPVKIYN 1114
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 1706 bits (4419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 820/1101 (74%), Positives = 932/1101 (84%), Gaps = 6/1101 (0%)
Query: 31 MEVPPSDVPEGPQPMD---AQPETTNLFGAPIVDESPSGRFTWTIRNFSR-STKKLYSED 86
M VP D+ EGPQPM+ P T + P D PS +FTWTI F+R +T+K YS+
Sbjct: 17 MLVPNPDLVEGPQPMEVAQTDPAATAVENPPPED-PPSLKFTWTIPMFTRLNTRKHYSDV 75
Query: 87 FYVGGYRWRILIFPKGNNVDQLSLYLDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRK 146
F VGGY+WRILIFPKGNNVD LS+YLD D+A LPYGWSRY+QFSL VVNQ+ + +SIRK
Sbjct: 76 FVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQFSLAVVNQVNNRYSIRK 135
Query: 147 ETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIVEADVAVRKVIDYWSHDSKKET 206
ET HQFNARE DWGFTSFMPL+ELY+P RGY+VNDT ++EA+VAVRKV+DYWS+DSKKET
Sbjct: 136 ETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRKVLDYWSYDSKKET 195
Query: 207 GYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYY 266
G+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P+ SIPLALQSLFYKLQY
Sbjct: 196 GFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYN 255
Query: 267 DSSVATKELTKSFGWDTQDSFLQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMN 326
D+SVATKELTKSFGWDT DSF+QHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMN
Sbjct: 256 DTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMN 315
Query: 327 YIECINVDYKSTRKESFYDLQLDVKGCRDVYDSFDKYVEVERLEGDNKYHAEQYGLQEAK 386
YIECINVDYKSTRKESFYDLQLDVKGC+DVY SFDKYVEVERLEGDNKYHAE + LQ+AK
Sbjct: 316 YIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHDLQDAK 375
Query: 387 KGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRGNGKYLSPEADKSIR 446
KGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL+LDLDR +G+YLSP+ADKS+R
Sbjct: 376 KGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGRYLSPDADKSVR 435
Query: 447 NLYXXXXXXXXXXXXXXXXYFAYIRPTLSNEWFKFDDARVTKEDADRALEEQYGGEEELP 506
NLY Y+A+IRPTLS++W+KFDD RVTKED RALEEQYGGEEELP
Sbjct: 436 NLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELP 495
Query: 507 HANPGFNNSPFKFTKYSNAYMLVYIRASDKDKIICSVNEKDIAEHXXXXXXXXXXXXXXX 566
NPGFNN PFKFTKYSNAYMLVYIR SDKDKIIC+V+EKDIAEH
Sbjct: 496 QNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKEDK 555
Query: 567 XXXXXXXHLYTIIKVARDEDLFEQIGKDIFFDLVDHNKVRSFRIQKQMPFLCFKEEVARE 626
HL+T IKVARD+D+ EQIGK+I+FDLVDH KVRSFRIQKQ PF FKEEVA+E
Sbjct: 556 RKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRIQKQTPFQQFKEEVAKE 615
Query: 627 FGIPVQYQRFWVWAKRQNHTFRPNRPLTQLEEERPVGHLREGITKANIADLKLFLEVKVG 686
FG+PVQ QRFW+WAKRQNHT+RPNRPL+ EE + VG +RE KAN A+LKLFLE++ G
Sbjct: 616 FGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASNKANNAELKLFLEIERG 675
Query: 687 QDLQPIPPLERTKEDLLLFFKLYDPLNETLRYVGSFYVKANEKPLDILTRLNQMADFAID 746
D PIPP E+T ED+LLFFKLYDP N LRYVG VK++ KP+DI+ +LN+MA FA D
Sbjct: 676 PDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSKPMDIVGQLNKMAGFAPD 735
Query: 747 EEIDLFEEIKFEPHVMCEPVDKGSTFRFNQLEDGDIICYQKPSKVVSGEQFRYPDIPSFL 806
EEI+LFEEIKFEP VMCE +DK ++FR Q+EDGDIICYQKP + E FRYPD+PSFL
Sbjct: 736 EEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQKPLSIEESE-FRYPDVPSFL 794
Query: 807 EYVHNRQVVRFRYLEKPKEDHFSLELSRINTYDYVVTRVAQHLGLNDPSKIRLTSHNCYS 866
EYV NR++VRFR LEKPKED F++ELS+++TYD VV RVA+ LGL+DPSK+RLTSHNCYS
Sbjct: 795 EYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDVVERVAEKLGLDDPSKLRLTSHNCYS 854
Query: 867 QLPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQCLKTLKIAFHHAAKDEV 926
Q PKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVLDIPLPELQ LKTLK+AFH A KDEV
Sbjct: 855 QQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHSATKDEV 914
Query: 927 AIYTTRLPRQSIVEDVINDLKSKVHLSHPDADLRLLEVFYHKIYKIFSLGEKIENINDQY 986
I+ RLP+QS V DVIN+LK+KV LSH DA+LRLLEVF+HKIYKIF E+IENINDQY
Sbjct: 915 IIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIYKIFPSTERIENINDQY 974
Query: 987 WTLRAEEIPQEEKNLGPEDRLIHVYHFMKDTAHDQQIQNFGDPFFMVIHEGETLADVKLR 1046
WTLRAEEIP+EEKN+GP DRLIHVYHF K+ +QQ+QNFG+PFF+VIHEGETL ++K R
Sbjct: 975 WTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQQVQNFGEPFFLVIHEGETLEEIKTR 1034
Query: 1047 IQKKLNVPDEEFSKWKFAFISLGHPEYLQDSDIVSAQFQRRDIYGAWEQYLGLEHTDNAP 1106
IQKKL+VPDE+F+KWKFA S+G P+YL D+D+V +FQRRD+YGAWEQYLGLEH DNAP
Sbjct: 1035 IQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDVYGAWEQYLGLEHIDNAP 1094
Query: 1107 KRSYIVNQNRHAFDKPVKIYN 1127
KR+Y NQNRHA++KPVKIYN
Sbjct: 1095 KRAYAANQNRHAYEKPVKIYN 1115
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 1701 bits (4405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 827/1104 (74%), Positives = 941/1104 (85%), Gaps = 11/1104 (0%)
Query: 31 MEVPPSDVPEGP-QPMD-AQPET--TNLFGAPIVDESPSGRFTWTIRNFSR-STKKLYSE 85
M VP SD+ +GP QPM+ QPET + + P ++ P+ +FTWTI NFSR +T+K YS+
Sbjct: 17 MLVPNSDLVDGPAQPMEVTQPETAASTVENQP-AEDPPTLKFTWTIPNFSRQNTRKHYSD 75
Query: 86 DFYVGGYRWRILIFPKGNNVDQLSLYLDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIR 145
F VGGY+WRILIFPKGNNVD LS+YLD +D+A+LPYGWSRYAQFSL VVNQI +++R
Sbjct: 76 VFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQFSLAVVNQIHTRYTVR 135
Query: 146 KETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIVEADVAVRKVIDYWSHDSKKE 205
KET HQFNARE DWGFTSFMPL+ELYDP RGY+VNDT +VEA+VAVRKV+DYWS+DSKKE
Sbjct: 136 KETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRKVLDYWSYDSKKE 195
Query: 206 TGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQY 265
TG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P+ SIPLALQSLFYKLQY
Sbjct: 196 TGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQY 255
Query: 266 YDSSVATKELTKSFGWDTQDSFLQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHM 325
D+SVATKELTKSFGWDT DSF+QHDVQELNRVLCEKLEDKMKGTVVEGTIQ+LFEGHHM
Sbjct: 256 NDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHM 315
Query: 326 NYIECINVDYKSTRKESFYDLQLDVKGCRDVYDSFDKYVEVERLEGDNKYHAEQYGLQEA 385
NYIECINVD+KSTRKESFYDLQLDVKGC+DVY SFDKYVEVERLEGDNKYHAE +GLQ+A
Sbjct: 316 NYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQDA 375
Query: 386 KKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRGNGKYLSPEADKSI 445
KKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDR +GKYLSP+AD+S+
Sbjct: 376 KKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDREDGKYLSPDADRSV 435
Query: 446 RNLYXXXXXXXXXXXXXXXXYFAYIRPTLSNEWFKFDDARVTKEDADRALEEQYGGEEEL 505
RNLY Y+A+IRPTLS++W+KFDD RVTKED RALEEQYGGEEEL
Sbjct: 436 RNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGEEEL 495
Query: 506 PHANPGFNNS-PFKFTKYSNAYMLVYIRASDKDKIICSVNEKDIAEHXXXXXXXXXXXXX 564
P NPGFNN+ PFKFTKYSNAYMLVYIR SDKDKIIC+V+EKDIAEH
Sbjct: 496 PQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKE 555
Query: 565 XXXXXXXXXHLYTIIKVARDEDLFEQIGKDIFFDLVDHNKVRSFRIQKQMPFLCFKEEVA 624
HLYTIIKVARDEDL EQIGKDI+FDLVDH+KVRSFRIQKQ PF FKEEVA
Sbjct: 556 DKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFRIQKQTPFQQFKEEVA 615
Query: 625 REFGIPVQYQRFWVWAKRQNHTFRPNRPLTQLEEERPVGHLREGITKANIADLKLFLEVK 684
+EFG+PVQ QRFW+WAKRQNHT+RPNRPLT EE +PVG +RE KAN A+LKLFLEV+
Sbjct: 616 KEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASNKANTAELKLFLEVE 675
Query: 685 VGQDLQPIPPLERTKEDLLLFFKLYDPLNETLRYVGSFYVKANEKPLDILTRLNQMADFA 744
DL+PIPP E++KED+LLFFKLYDP L Y G VK++ KP+DI +LN+M FA
Sbjct: 676 -HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSKPMDITGKLNEMVGFA 734
Query: 745 IDEEIDLFEEIKFEPHVMCEPVDKGSTFRFNQLEDGDIICYQKPSKVVSGE-QFRYPDIP 803
DEEI+LFEEIKFEP VMCE +DK ++FR Q+EDGDIIC+QKP +V+ E + YP +P
Sbjct: 735 PDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQKP--LVNKEIECLYPAVP 792
Query: 804 SFLEYVHNRQVVRFRYLEKPKEDHFSLELSRINTYDYVVTRVAQHLGLNDPSKIRLTSHN 863
SFLEYV NRQ+VRFR LEKPKED F LELS+ +TYD VV +VA+ LGL+DPSK+RLTSHN
Sbjct: 793 SFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAEKLGLDDPSKLRLTSHN 852
Query: 864 CYSQLPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQCLKTLKIAFHHAAK 923
CYSQ PKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVLDIPLPELQ LKTLK+AFHHA K
Sbjct: 853 CYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATK 912
Query: 924 DEVAIYTTRLPRQSIVEDVINDLKSKVHLSHPDADLRLLEVFYHKIYKIFSLGEKIENIN 983
+EV I+ RLP+QS V DVIN+LK+KV LSHPDA+LRLLEVFYHKIYKIF E+IENIN
Sbjct: 913 EEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKIYKIFPSTERIENIN 972
Query: 984 DQYWTLRAEEIPQEEKNLGPEDRLIHVYHFMKDTAHDQQIQNFGDPFFMVIHEGETLADV 1043
DQYWTLRAEEIP+EEKN+GP DRLI VYHF K+T +QQ+QNFG+PFF+VIHEGETL ++
Sbjct: 973 DQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFFLVIHEGETLEEI 1032
Query: 1044 KLRIQKKLNVPDEEFSKWKFAFISLGHPEYLQDSDIVSAQFQRRDIYGAWEQYLGLEHTD 1103
K RIQKKL+V DE+F+KWKFAF+S+G PEYLQD+D+V +FQRRD+YGA+EQYLGLEH D
Sbjct: 1033 KNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQRRDVYGAFEQYLGLEHAD 1092
Query: 1104 NAPKRSYIVNQNRHAFDKPVKIYN 1127
PKR+Y NQNRHA++KPVKIYN
Sbjct: 1093 TTPKRAYAANQNRHAYEKPVKIYN 1116
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 1701 bits (4404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 827/1104 (74%), Positives = 941/1104 (85%), Gaps = 11/1104 (0%)
Query: 31 MEVPPSDVPEGP-QPMD-AQPET--TNLFGAPIVDESPSGRFTWTIRNFSR-STKKLYSE 85
M VP SD+ +GP QPM+ QPET + + P ++ P+ +FTWTI NFSR +T+K YS+
Sbjct: 16 MLVPNSDLVDGPAQPMEVTQPETAASTVENQP-AEDPPTLKFTWTIPNFSRQNTRKHYSD 74
Query: 86 DFYVGGYRWRILIFPKGNNVDQLSLYLDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIR 145
F VGGY+WRILIFPKGNNVD LS+YLD +D+A+LPYGWSRYAQFSL VVNQI +++R
Sbjct: 75 VFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQFSLAVVNQIHTRYTVR 134
Query: 146 KETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIVEADVAVRKVIDYWSHDSKKE 205
KET HQFNARE DWGFTSFMPL+ELYDP RGY+VNDT +VEA+VAVRKV+DYWS+DSKKE
Sbjct: 135 KETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRKVLDYWSYDSKKE 194
Query: 206 TGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQY 265
TG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P+ SIPLALQSLFYKLQY
Sbjct: 195 TGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQY 254
Query: 266 YDSSVATKELTKSFGWDTQDSFLQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHM 325
D+SVATKELTKSFGWDT DSF+QHDVQELNRVLCEKLEDKMKGTVVEGTIQ+LFEGHHM
Sbjct: 255 NDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHM 314
Query: 326 NYIECINVDYKSTRKESFYDLQLDVKGCRDVYDSFDKYVEVERLEGDNKYHAEQYGLQEA 385
NYIECINVD+KSTRKESFYDLQLDVKGC+DVY SFDKYVEVERLEGDNKYHAE +GLQ+A
Sbjct: 315 NYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQDA 374
Query: 386 KKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRGNGKYLSPEADKSI 445
KKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDR +GKYLSP+AD+S+
Sbjct: 375 KKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDREDGKYLSPDADRSV 434
Query: 446 RNLYXXXXXXXXXXXXXXXXYFAYIRPTLSNEWFKFDDARVTKEDADRALEEQYGGEEEL 505
RNLY Y+A+IRPTLS++W+KFDD RVTKED RALEEQYGGEEEL
Sbjct: 435 RNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGEEEL 494
Query: 506 PHANPGFNNS-PFKFTKYSNAYMLVYIRASDKDKIICSVNEKDIAEHXXXXXXXXXXXXX 564
P NPGFNN+ PFKFTKYSNAYMLVYIR SDKDKIIC+V+EKDIAEH
Sbjct: 495 PQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKE 554
Query: 565 XXXXXXXXXHLYTIIKVARDEDLFEQIGKDIFFDLVDHNKVRSFRIQKQMPFLCFKEEVA 624
HLYTIIKVARDEDL EQIGKDI+FDLVDH+KVRSFRIQKQ PF FKEEVA
Sbjct: 555 DKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFRIQKQTPFQQFKEEVA 614
Query: 625 REFGIPVQYQRFWVWAKRQNHTFRPNRPLTQLEEERPVGHLREGITKANIADLKLFLEVK 684
+EFG+PVQ QRFW+WAKRQNHT+RPNRPLT EE +PVG +RE KAN A+LKLFLEV+
Sbjct: 615 KEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASNKANTAELKLFLEVE 674
Query: 685 VGQDLQPIPPLERTKEDLLLFFKLYDPLNETLRYVGSFYVKANEKPLDILTRLNQMADFA 744
DL+PIPP E++KED+LLFFKLYDP L Y G VK++ KP+DI +LN+M FA
Sbjct: 675 -HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSKPMDITGKLNEMVGFA 733
Query: 745 IDEEIDLFEEIKFEPHVMCEPVDKGSTFRFNQLEDGDIICYQKPSKVVSGE-QFRYPDIP 803
DEEI+LFEEIKFEP VMCE +DK ++FR Q+EDGDIIC+QKP +V+ E + YP +P
Sbjct: 734 PDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQKP--LVNKEIECLYPAVP 791
Query: 804 SFLEYVHNRQVVRFRYLEKPKEDHFSLELSRINTYDYVVTRVAQHLGLNDPSKIRLTSHN 863
SFLEYV NRQ+VRFR LEKPKED F LELS+ +TYD VV +VA+ LGL+DPSK+RLTSHN
Sbjct: 792 SFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAEKLGLDDPSKLRLTSHN 851
Query: 864 CYSQLPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQCLKTLKIAFHHAAK 923
CYSQ PKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVLDIPLPELQ LKTLK+AFHHA K
Sbjct: 852 CYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATK 911
Query: 924 DEVAIYTTRLPRQSIVEDVINDLKSKVHLSHPDADLRLLEVFYHKIYKIFSLGEKIENIN 983
+EV I+ RLP+QS V DVIN+LK+KV LSHPDA+LRLLEVFYHKIYKIF E+IENIN
Sbjct: 912 EEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKIYKIFPSTERIENIN 971
Query: 984 DQYWTLRAEEIPQEEKNLGPEDRLIHVYHFMKDTAHDQQIQNFGDPFFMVIHEGETLADV 1043
DQYWTLRAEEIP+EEKN+GP DRLI VYHF K+T +QQ+QNFG+PFF+VIHEGETL ++
Sbjct: 972 DQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFFLVIHEGETLEEI 1031
Query: 1044 KLRIQKKLNVPDEEFSKWKFAFISLGHPEYLQDSDIVSAQFQRRDIYGAWEQYLGLEHTD 1103
K RIQKKL+V DE+F+KWKFAF+S+G PEYLQD+D+V +FQRRD+YGA+EQYLGLEH D
Sbjct: 1032 KNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQRRDVYGAFEQYLGLEHAD 1091
Query: 1104 NAPKRSYIVNQNRHAFDKPVKIYN 1127
PKR+Y NQNRHA++KPVKIYN
Sbjct: 1092 TTPKRAYAANQNRHAYEKPVKIYN 1115
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 1487 bits (3850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/971 (75%), Positives = 824/971 (84%), Gaps = 11/971 (1%)
Query: 31 MEVPPSDVPEGP-QPMD-AQPET--TNLFGAPIVDESPSGRFTWTIRNFSR-STKKLYSE 85
M VP SD+ +GP QPM+ QPET + + P ++ P+ +FTWTI NFSR +T+K YS+
Sbjct: 17 MLVPNSDLVDGPAQPMEVTQPETAASTVENQP-AEDPPTLKFTWTIPNFSRQNTRKHYSD 75
Query: 86 DFYVGGYRWRILIFPKGNNVDQLSLYLDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIR 145
F VGGY+WRILIFPKGNNVD LS+YLD +D+A+LPYGWSRYAQFSL VVNQI +++R
Sbjct: 76 VFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQFSLAVVNQIHTRYTVR 135
Query: 146 KETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIVEADVAVRKVIDYWSHDSKKE 205
KET HQFNARE DWGFTSFMPL+ELYDP RGY+VNDT +VEA+VAVRKV+DYWS+DSKKE
Sbjct: 136 KETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRKVLDYWSYDSKKE 195
Query: 206 TGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQY 265
TG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P+ SIPLALQSLFYKLQY
Sbjct: 196 TGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQY 255
Query: 266 YDSSVATKELTKSFGWDTQDSFLQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHM 325
D+SVATKELTKSFGWDT DSF+QHDVQELNRVLCEKLEDKMKGTVVEGTIQ+LFEGHHM
Sbjct: 256 NDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHM 315
Query: 326 NYIECINVDYKSTRKESFYDLQLDVKGCRDVYDSFDKYVEVERLEGDNKYHAEQYGLQEA 385
NYIECINVD+KSTRKESFYDLQLDVKGC+DVY SFDKYVEVERLEGDNKYHAE +GLQ+A
Sbjct: 316 NYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQDA 375
Query: 386 KKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRGNGKYLSPEADKSI 445
KKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDR +GKYLSP+AD+S+
Sbjct: 376 KKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDREDGKYLSPDADRSV 435
Query: 446 RNLYXXXXXXXXXXXXXXXXYFAYIRPTLSNEWFKFDDARVTKEDADRALEEQYGGEEEL 505
RNLY Y+A+IRPTLS++W+KFDD RVTKED RALEEQYGGEEEL
Sbjct: 436 RNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGEEEL 495
Query: 506 PHANPGFNNS-PFKFTKYSNAYMLVYIRASDKDKIICSVNEKDIAEHXXXXXXXXXXXXX 564
P NPGFNN+ PFKFTKYSNAYMLVYIR SDKDKIIC+V+EKDIAEH
Sbjct: 496 PQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKE 555
Query: 565 XXXXXXXXXHLYTIIKVARDEDLFEQIGKDIFFDLVDHNKVRSFRIQKQMPFLCFKEEVA 624
HLYTIIKVARDEDL EQIGKDI+FDLVDH+KVRSFRIQKQ PF FKEEVA
Sbjct: 556 DKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFRIQKQTPFQQFKEEVA 615
Query: 625 REFGIPVQYQRFWVWAKRQNHTFRPNRPLTQLEEERPVGHLREGITKANIADLKLFLEVK 684
+EFG+PVQ QRFW+WAKRQNHT+RPNRPLT EE +PVG +RE KAN A+LKLFLEV+
Sbjct: 616 KEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASNKANTAELKLFLEVE 675
Query: 685 VGQDLQPIPPLERTKEDLLLFFKLYDPLNETLRYVGSFYVKANEKPLDILTRLNQMADFA 744
DL+PIPP E++KED+LLFFKLYDP L Y G VK++ KP+DI +LN+M FA
Sbjct: 676 -HLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSKPMDITGKLNEMVGFA 734
Query: 745 IDEEIDLFEEIKFEPHVMCEPVDKGSTFRFNQLEDGDIICYQKPSKVVSGE-QFRYPDIP 803
DEEI+LFEEIKFEP VMCE +DK ++FR Q+EDGDIIC+QKP +V+ E + YP +P
Sbjct: 735 PDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQKP--LVNKEIECLYPAVP 792
Query: 804 SFLEYVHNRQVVRFRYLEKPKEDHFSLELSRINTYDYVVTRVAQHLGLNDPSKIRLTSHN 863
SFLEYV NRQ+VRFR LEKPKED F LELS+ +TYD VV +VA+ LGL+DPSK+RLTSHN
Sbjct: 793 SFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAEKLGLDDPSKLRLTSHN 852
Query: 864 CYSQLPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQCLKTLKIAFHHAAK 923
CYSQ PKPQPIKYRGV+HLSDMLVHYNQTSDILYYEVLDIPLPELQ LKTLK+AFHHA K
Sbjct: 853 CYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATK 912
Query: 924 DEVAIYTTRLPRQSIVEDVINDLKSKVHLSHPDADLRLLEVFYHKIYKIFSLGEKIENIN 983
+EV I+ RLP+QS V DVIN+LK+KV LSHPDA+LRLLEVFYHKIYKIF E+IENIN
Sbjct: 913 EEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKIYKIFPSTERIENIN 972
Query: 984 DQYWTLRAEEI 994
DQYWTLRAEE+
Sbjct: 973 DQYWTLRAEEV 983
>AT3G58250.1 | Symbols: | TRAF-like family protein |
chr3:21570745-21572143 REVERSE LENGTH=317
Length = 317
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
Query: 61 DESPSGRFTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKGNNV--DQLSLYLDATDS 117
D++ +F+W I+NFS ++K+YS+ F + G RWR+L FPKGN+ D LSLYLD +S
Sbjct: 4 DQADKKKFSWVIKNFSSLQSEKIYSDQFVIDGCRWRLLAFPKGNDTKSDHLSLYLDVAES 63
Query: 118 ATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGY 177
+LP GW R+AQFS T+VN I S RKET H F + DWGFT+ +PL EL G+
Sbjct: 64 ESLPCGWRRHAQFSFTIVNHIPEKCSQRKETIHWFCEKVSDWGFTNLVPLIELKAEDSGF 123
Query: 178 IVNDTCIVEADVAVRKVI 195
+V + ++ V +VI
Sbjct: 124 LVKGELKIVVEIEVLEVI 141
>AT3G58270.2 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21576033-21577655 REVERSE LENGTH=343
Length = 343
Score = 126 bits (317), Expect = 7e-29, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 67 RFTWTIRNFS-RSTKKLYSEDFYVGGYRWRILIFPKGNNVDQLSLYLDATDSATLPYGWS 125
+FTW I+NFS + ++K YS++F+V G +WR+L FPKGN V++LSLYL S LP GW
Sbjct: 8 KFTWVIKNFSSQQSRKNYSDEFFVDGCKWRLLAFPKGNGVEKLSLYLAVAGSEFLPDGWR 67
Query: 126 RYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIV 185
R+A F +VVNQ+ S +ET + F+A DWGFTS + L +L+D G++VN +
Sbjct: 68 RHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGFLVNGELKI 127
Query: 186 EADVAVRKVI 195
DV+V +VI
Sbjct: 128 VVDVSVLEVI 137
>AT3G58270.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21576033-21577655 REVERSE LENGTH=343
Length = 343
Score = 126 bits (317), Expect = 7e-29, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 67 RFTWTIRNFS-RSTKKLYSEDFYVGGYRWRILIFPKGNNVDQLSLYLDATDSATLPYGWS 125
+FTW I+NFS + ++K YS++F+V G +WR+L FPKGN V++LSLYL S LP GW
Sbjct: 8 KFTWVIKNFSSQQSRKNYSDEFFVDGCKWRLLAFPKGNGVEKLSLYLAVAGSEFLPDGWR 67
Query: 126 RYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIV 185
R+A F +VVNQ+ S +ET + F+A DWGFTS + L +L+D G++VN +
Sbjct: 68 RHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGFLVNGELKI 127
Query: 186 EADVAVRKVI 195
DV+V +VI
Sbjct: 128 VVDVSVLEVI 137
>AT3G58210.1 | Symbols: | TRAF-like family protein |
chr3:21562645-21564067 REVERSE LENGTH=330
Length = 330
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 3/132 (2%)
Query: 67 RFTWTIRNFSRSTKKLY-SEDFYVGGYRWRILIFPKGNNV--DQLSLYLDATDSATLPYG 123
+FTW I+NFS S ++ S F +GG +WR+L++P+G N D LSL+L+ D +LP G
Sbjct: 8 KFTWVIQNFSSSQSRVVPSNQFVIGGCKWRLLVYPEGFNKSGDHLSLFLEVADPRSLPPG 67
Query: 124 WSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTC 183
WSR+A++ LT+VNQ S R E FN + WG ++ +PL +L+ G++VND
Sbjct: 68 WSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDGGFLVNDEL 127
Query: 184 IVEADVAVRKVI 195
+ A+V V +VI
Sbjct: 128 KIVAEVNVLEVI 139
>AT3G58340.1 | Symbols: | TRAF-like family protein |
chr3:21589071-21590401 REVERSE LENGTH=325
Length = 325
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Query: 67 RFTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKGNNVDQLSLYLDATDSATLPYGWS 125
+F W I+NFS ++++ +S +G +WR++ FPKG D LSLYL+ D +LP GW
Sbjct: 8 KFCWEIKNFSSLNSERCHSVPVVIGDCKWRLVAFPKGYKADYLSLYLEVADFKSLPSGWR 67
Query: 126 RYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIV 185
RY +F +VNQ+ S+++ET F+ WGF + + L EL G++VN ++
Sbjct: 68 RYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKDGGFLVNGQVMI 127
Query: 186 EADVAVRKVI 195
A+V +VI
Sbjct: 128 VAEVEFLEVI 137
>AT3G58360.1 | Symbols: | TRAF-like family protein |
chr3:21593505-21594866 REVERSE LENGTH=298
Length = 298
Score = 106 bits (265), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Query: 65 SGRFTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKGNNVDQLSLYLDATDSATLPYG 123
+ + TW I NFS +KK+YS+ F VGG +WR L++PKGNNVD L LYL+ D +L
Sbjct: 6 AKKITWAIENFSSLHSKKIYSDPFIVGGCKWRFLVYPKGNNVDYLFLYLEVADYESLSPE 65
Query: 124 WSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTC 183
W R+A++ L VVNQ S + E F+ + WG S PL E+ G++VN
Sbjct: 66 WRRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSMFPLNEINAKDSGFLVNGEL 125
Query: 184 IVEADVAVRKVI 195
+ A++ V +VI
Sbjct: 126 KIVAEIEVLEVI 137
>AT3G58260.1 | Symbols: | TRAF-like family protein |
chr3:21573754-21575114 REVERSE LENGTH=321
Length = 321
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 45/237 (18%)
Query: 68 FTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKGNNVD---QLSLYLDATDSA-TLPY 122
FTW I+N S ++ S+ F VGG +WR++ +P+ N+ D LS+YL D +LP
Sbjct: 9 FTWVIKNLSTLQGLEVRSKIFVVGGCKWRLIAYPEVNDADGYLSLSVYLGVPDCCESLPS 68
Query: 123 GWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDT 182
GW R+A+FSLT+VNQ+ S +ET F+ WGF + L ++ D G++VND
Sbjct: 69 GWKRHAKFSLTIVNQLSEGLSQVQETQAWFDENAPGWGFPPMLNLKDVSDKYGGFLVNDE 128
Query: 183 CIVEADVAVRKVIDYWSHDSKKET----GY-----------------------VGLKNQG 215
+V V V +V+ E+ G+ +KNQ
Sbjct: 129 VMVAVAVDVIEVVGSLDAPEMSESMDIKGFKVLPSQVKSVNRLFESHPDIASKFSIKNQS 188
Query: 216 -ATCYMNSLL---QTLYHIPYFRKAVYHMPTTENDLPSGSIPLA-LQSLFYKLQYYD 267
T YMN LL +TL+ P M +E+DL LA ++S+ +KL + +
Sbjct: 189 LKTAYMNVLLCLAETLHQSP--------MEISEDDLSDAKTTLAYMKSVGFKLDWLE 237
>AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 |
chr3:21591618-21592836 REVERSE LENGTH=301
Length = 301
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
Query: 67 RFTWTIRNFSRSTKKL-YSEDFYVGGYRWRILIFPKG-NNVDQLSLYLDATDSATLPYGW 124
+ TWTI+NF+ L YS+ F VGG +W + +PKG NN + LSL+L +LP GW
Sbjct: 8 KITWTIKNFASLLSDLIYSDHFVVGGCKWHLRAYPKGYNNANSLSLFLGVAVPTSLPSGW 67
Query: 125 SRYAQFSLTVVNQIRHNFSIRK--ETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDT 182
R+ +F LT+VNQ+ S K E F+ + +WG +S PL E++ G+++N
Sbjct: 68 RRHTKFRLTLVNQLSDKLSQSKLNELEQWFDEKTTNWGLSSMCPLNEIHAKDSGFLLNGE 127
Query: 183 CIVEADVAVRKVI 195
+ ++ V + I
Sbjct: 128 LKIVVEIKVLETI 140
>AT3G27040.1 | Symbols: | Meprin and TRAF (MATH) homology
domain-containing protein | chr3:9974912-9977927 REVERSE
LENGTH=358
Length = 358
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 79/131 (60%), Gaps = 2/131 (1%)
Query: 67 RFTWTIRNF-SRSTKKLYSEDFYVGGYRWRILIFPKGNNV-DQLSLYLDATDSATLPYGW 124
+FTW I+N+ S + +YS+ F G +WR+L FPKGNN+ D LY+ +S +LP GW
Sbjct: 96 KFTWVIKNYNSLGSGSVYSDTFKAGRCKWRLLAFPKGNNIYDYFFLYICVPNSESLPSGW 155
Query: 125 SRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCI 184
R A+ S T+VNQI S ++E + F+ ++ GF S L+E+ +G++VN
Sbjct: 156 RRRAKVSFTMVNQIPGGLSQQREAVYWFDEKDTTHGFESMFLLSEIQSSDKGFLVNGEVK 215
Query: 185 VEADVAVRKVI 195
+ A+V V +VI
Sbjct: 216 IVAEVDVLEVI 226
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
Query: 67 RFTWTIRNF-SRSTKKLYSEDFYVGGYRWRILIFPKGNN--VDQLSLYLDATDSATLPYG 123
+F W I+NF S T ++YS+ F G +WR++ +PK + SL+L DS +LP G
Sbjct: 9 KFAWVIKNFNSLDTTRVYSDTFKAGRCKWRLVAYPKRRDRYTTSFSLFLCVPDSESLPSG 68
Query: 124 WSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDT 182
W R A+ ++ + S R +HQ + ++ W ++ L G G + +DT
Sbjct: 69 WRRRAK----LIGYNKKYSSSRTMGNHQAD-KKFTWVIKNYNSL------GSGSVYSDT 116
>AT3G58410.1 | Symbols: | TRAF-like family protein |
chr3:21604871-21606229 REVERSE LENGTH=328
Length = 328
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 18/131 (13%)
Query: 67 RFTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKGNNVDQLSLYLDATDSATLPYGWS 125
+F W I+NFS KK YS F +G +WR+ I+PKGNN D LSL+L+ D +LP GW
Sbjct: 29 KFAWVIKNFSSLQCKKFYSVPFQIGDCKWRLSIYPKGNNCDYLSLFLEVADFKSLPSGWR 88
Query: 126 RYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIV 185
RY + L +V Q WGF +PL +L+D G++VN ++
Sbjct: 89 RYVKLRLYIVKQ-----------------EMWGWGFLYMLPLTKLHDEKEGFLVNGELMI 131
Query: 186 EADVAVRKVID 196
A+V ID
Sbjct: 132 VAEVDALGFID 142
>AT3G58200.1 | Symbols: | TRAF-like family protein |
chr3:21560086-21561358 REVERSE LENGTH=319
Length = 319
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 2/121 (1%)
Query: 60 VDESPSGRFTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKGNNVDQ-LSLYLDATDS 117
+++ +F W I+NFS +++++S+ F VG +WR++ +PKG ++ SL+L TD
Sbjct: 1 MEKEADNKFRWVIKNFSSLGSERVFSDIFVVGSCKWRLMAYPKGVRDNRCFSLFLVVTDF 60
Query: 118 ATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGY 177
TLP W R+ + L VVNQ+ SI KET F+ + WGF + +PL EL G+
Sbjct: 61 KTLPCDWKRHTRLRLNVVNQLSEELSILKETQMWFDQKTPAWGFLAMLPLTELKAENGGF 120
Query: 178 I 178
+
Sbjct: 121 L 121
>AT2G05420.1 | Symbols: | TRAF-like family protein |
chr2:1983901-1985341 FORWARD LENGTH=297
Length = 297
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 10/140 (7%)
Query: 65 SGRFTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKGN--------NVDQLSLYLDAT 115
S TW I NFS + ++S+ F VG +WR+ +PKGN + L+LYL+
Sbjct: 7 SKTITWVIENFSSLQSASIHSDQFVVGDCKWRLKAYPKGNEKATYLAYRANNLALYLNVA 66
Query: 116 DSATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGR 175
+S + P GW+R+ +FSLT+VNQ S E+ H F+ + GF + +PL L+
Sbjct: 67 NSKSFPIGWTRHTKFSLTLVNQKSEKLSKLTESQHWFDHKSTSRGFPAMIPLTNLHT-NE 125
Query: 176 GYIVNDTCIVEADVAVRKVI 195
G++VN + A V V +V+
Sbjct: 126 GFLVNGELTLVAKVEVLEVV 145
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 150/354 (42%), Gaps = 32/354 (9%)
Query: 205 ETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQ 264
E+ GL N GATCY NS+LQ LY FR+ V+ + + L + + LF +L
Sbjct: 102 ESTPAGLTNLGATCYANSILQCLYMNTAFREGVFSVEV--HVLKQNPVLDQIARLFAQLH 159
Query: 265 YYDSS-VATKELTKSFGWDTQDSFLQHDVQELNRVLCEKLEDKM--KGTVVEGTIQKLFE 321
S V + K+ D+ +Q D E +L LE + G + +Q LF
Sbjct: 160 ASQKSFVDSDAFVKTL---ELDNGVQQDTHEFLTLLLSLLERCLLHSGVKAKTIVQDLFS 216
Query: 322 G---HHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYDSFDKYVEVERLEGDNKYHAE 378
G H +C S++ E FY L+L+VKG + + S + Y+ +E+L GDN+Y
Sbjct: 217 GSVSHVTTCSKCGRDSEASSKMEDFYALELNVKGLKSLDASLNDYLSLEQLNGDNQYFCG 276
Query: 379 QYGLQ-EAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRGNGKYL 437
+ +A + + PPV+ QLKR + KI + FP LD+ G L
Sbjct: 277 SCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTAKKKITSSFSFPQVLDM----GSRL 332
Query: 438 SPEADKSIRNLYXXXXXXXXXXXXXXXXYFAYIRPTLSNEWFKFDDARVTK-------ED 490
+ E+ ++ Y A+I+ + W++FDD V++ E
Sbjct: 333 A-ESSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLWWEFDDEHVSELGKRPCNEA 391
Query: 491 ADRALEEQYGGEEELPHANPGFNN------SPFKFTKY--SNAYMLVYIRASDK 536
+ + + G + G + S K + S+AYML+Y DK
Sbjct: 392 SSSTPQSESNGTASSGNITDGIQSGSSDCRSAIKSEVFSSSDAYMLMYSLRCDK 445
>AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology
domain-containing protein | chr3:16343333-16346027
FORWARD LENGTH=564
Length = 564
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 67 RFTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKG-NNVDQLSLYLDATDSATLPYGW 124
+FTW I+NFS ++ + S+ F +GG +W +L +P G N LSLYLD TLP G
Sbjct: 5 KFTWVIKNFSSLQSEYIKSDIFVIGGCKWCLLAYPNGKQNASYLSLYLDGPTLKTLPCGC 64
Query: 125 SRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCI 184
R +F LTVVNQ+ N S R E F+ + G+ + L +L G++VN+
Sbjct: 65 RRRIRFRLTVVNQLSENLSRRGEGKRWFDKKLPLCGYEEVLLLTKLNAKHGGFLVNNEVK 124
Query: 185 VEADVAVRKVI 195
+ A+V V +VI
Sbjct: 125 IVAEVDVLEVI 135
>AT3G58290.1 | Symbols: | TRAF-like superfamily protein |
chr3:21580572-21581861 REVERSE LENGTH=282
Length = 282
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 21/139 (15%)
Query: 67 RFTWTIRNFSRSTKKLYSEDFYVGG------YRWRILIFPKG----------NNVDQLSL 110
+F W I+NFS L +D YV WR+ +P+G NN D LSL
Sbjct: 11 KFVWVIKNFS----SLQLQDCYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGDHLSL 66
Query: 111 YLDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAEL 170
YL+ D +LP GW +Y QF TVVNQI + S+++E F+ + +WG+ + L +L
Sbjct: 67 YLEV-DFESLPCGWRQYTQFRFTVVNQISEHSSVKREGRKWFDKKAPEWGWEEMISLTKL 125
Query: 171 YDPGRGYIVNDTCIVEADV 189
D G++VN ++ A+V
Sbjct: 126 NDINSGFVVNGELMIVAEV 144
>AT2G01790.1 | Symbols: | TRAF-like family protein |
chr2:341322-342480 REVERSE LENGTH=269
Length = 269
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 70 WTIRNFS-RSTKKLYSEDFYVGGYRWRILIFPKGNN---VDQLSLYLDATDSATLPYGWS 125
W I NFS + ++YS+ F VGG +W +L P+GNN D SLYL DS LP GW
Sbjct: 11 WVINNFSFLDSDRVYSDIFVVGGCKWCLLALPEGNNNYIYDYFSLYLCVPDSEYLPSGWR 70
Query: 126 RYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIV 185
R A+ S T+VNQ+ S ++E + F+ + GF S L +G++VN +
Sbjct: 71 RRAKVSFTMVNQVTGELSQQQEGVYWFDEKNTTQGFGSMFRLLVFQSSYKGFLVNGEVDI 130
Query: 186 EADVAVRKVI 195
A+V V +VI
Sbjct: 131 VAEVDVVEVI 140
>AT1G04300.1 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1074
Length = 1074
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 85/137 (62%), Gaps = 12/137 (8%)
Query: 66 GRFTWTIRNFSRSTKKLY-SEDFYVGGYRWRILIFPKGNNV-DQLSLYLDATDSATLPYG 123
G++TW I FS TK+ + S F GGY+W ILI+P+G +V + LSL+L + L G
Sbjct: 68 GQYTWKIPKFSEITKREHRSNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVANYDKLLPG 127
Query: 124 WSRYAQFSLTVVNQ--IRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVND 181
WS++AQF+++V++Q + FS +T H+F +E DWG+ FM L +L D G+I
Sbjct: 128 WSQFAQFTISVLSQDLKKSKFS---DTLHRFWKKEHDWGWKKFMELPKLKD---GFIDES 181
Query: 182 TCI-VEADVAV-RKVID 196
C+ +EA V V R+ +D
Sbjct: 182 GCLTIEAKVQVIRERVD 198
>AT3G44790.1 | Symbols: | TRAF-like family protein |
chr3:16328792-16330265 FORWARD LENGTH=324
Length = 324
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 6/131 (4%)
Query: 67 RFTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKG-NNVDQLSLYLDATDSATLPYGW 124
+FTW I+NFS +K + S+ F +GG +W F KG N + LSL+L S TLP GW
Sbjct: 5 KFTWVIKNFSSLQSKYINSDKFVIGGCKW----FLKGYQNANYLSLFLMVATSKTLPCGW 60
Query: 125 SRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCI 184
RY +F LTVVNQ+ S ++ET F+ G + L +L G++VN+
Sbjct: 61 RRYTRFRLTVVNQLSDELSQQRETETWFDQNVVLSGNRHMISLTKLNAKKGGFLVNNEVK 120
Query: 185 VEADVAVRKVI 195
+ +V V +VI
Sbjct: 121 IVVEVDVLQVI 131
>AT5G52330.1 | Symbols: | TRAF-like superfamily protein |
chr5:21247596-21249732 REVERSE LENGTH=397
Length = 397
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 81/131 (61%), Gaps = 11/131 (8%)
Query: 66 GRFTWTIRNFSRSTKKLYSED-FYVGGYRWRILIFPKGNNV-DQLSLYLDATDSATLPYG 123
G+ TW I+ FS+ +K+ ++ F +GGY W IL++P+G +V + LSL+L + L G
Sbjct: 19 GKNTWKIKKFSQISKREFASSVFEIGGYSWHILMYPEGCDVSNHLSLFLCVANHDELLPG 78
Query: 124 WSRYAQFSLTVVNQ--IRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVND 181
WS+ AQF+++V+++ + FS +T H+F +E DWG+ FM L +L D G+I +
Sbjct: 79 WSQLAQFTISVMHKDPKKSKFS---DTLHRFWKKEHDWGWKKFMELPKLRD---GFIDDS 132
Query: 182 TCI-VEADVAV 191
C+ +E V V
Sbjct: 133 GCLTIETKVQV 143
>AT1G31390.1 | Symbols: | TRAF-like family protein |
chr1:11243191-11244392 REVERSE LENGTH=268
Length = 268
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Query: 67 RFTWTIRNFS-RSTKKLYSEDFYVGGYRWRILIFPKGNNVDQ---LSLYLDATDSATLPY 122
+ TWTI+NFS ++ + S+ F VG +W ++ +PKGN LSLYL+ D +LP
Sbjct: 8 KITWTIKNFSFVQSQAIDSDIFVVGDSKWHLVAYPKGNGESTNKCLSLYLNVADFQSLPN 67
Query: 123 GWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVN 180
GW R+ ++ LTVVNQ+ S ++ F GF + +PL++L D G++VN
Sbjct: 68 GWKRHIKYRLTVVNQMSEKLSEQEVIQGWFYKNFHISGFQTMLPLSKLLDKNGGFLVN 125
>AT3G17380.1 | Symbols: | TRAF-like family protein |
chr3:5950240-5952124 FORWARD LENGTH=309
Length = 309
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 8/142 (5%)
Query: 60 VDESPSGRFTWTIRNFSRSTK----KLYSEDFYVGGYRWRILIFPKGNNV----DQLSLY 111
+ ++P + I +FS TK + +E F GGY+W+++++P GN D +S+Y
Sbjct: 14 ISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKDHVSVY 73
Query: 112 LDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELY 171
L DS++L GW YA F L +++Q + N+ I + +F++ + +WGF F+P
Sbjct: 74 LSLADSSSLSPGWEVYAVFRLYLLDQNKDNYLILQGNERRFHSVKREWGFDKFIPTGTFS 133
Query: 172 DPGRGYIVNDTCIVEADVAVRK 193
D GY++ DTC+ ADV V K
Sbjct: 134 DASNGYLMEDTCMFGADVFVSK 155
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 58 PIVDESPSGRFTWTIRNFSRSTKKLY-SEDFYVGGYRWRILIFPKG---NNVDQLSLYLD 113
++ ++ S + W I NFS+ K+ Y S F+ G +W+I +P G LS+YL
Sbjct: 166 SMIKDATSSKHVWKIENFSKLDKESYDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSIYLT 225
Query: 114 ATDSATLPYGWSRYAQFSLTVVNQI--RHNFSIRKETHHQFNAREGDWGFTSFMPLAELY 171
D T+ G + +F++ + +Q+ RH I + F+ + G+ ++ +
Sbjct: 226 LVDPETISDGTKIFVEFTIRIFDQLQGRH---IAGKVTKWFSRSSSEHGWVKYVSMVYFT 282
Query: 172 DPGRGYIVNDTCIVEADVAVRKV 194
P G ++ D C+VEADV V +
Sbjct: 283 QPNSGLLLKDVCLVEADVCVHGI 305
>AT1G04300.3 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1082
Length = 1082
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 86/145 (59%), Gaps = 20/145 (13%)
Query: 66 GRFTWTIRNFSRSTKKLY-SEDFYVGGYRWRILIFPKGNNV-DQLSLYLDATDS------ 117
G++TW I FS TK+ + S F GGY+W ILI+P+G +V + LSL+L +
Sbjct: 68 GQYTWKIPKFSEITKREHRSNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVANYDKLLPG 127
Query: 118 --ATLPYGWSRYAQFSLTVVNQ--IRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDP 173
A L GWS++AQF+++V++Q + FS +T H+F +E DWG+ FM L +L D
Sbjct: 128 SFAILEAGWSQFAQFTISVLSQDLKKSKFS---DTLHRFWKKEHDWGWKKFMELPKLKD- 183
Query: 174 GRGYIVNDTCI-VEADVAV-RKVID 196
G+I C+ +EA V V R+ +D
Sbjct: 184 --GFIDESGCLTIEAKVQVIRERVD 206
>AT1G31400.1 | Symbols: | TRAF-like family protein |
chr1:11245225-11246481 REVERSE LENGTH=278
Length = 278
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 7/133 (5%)
Query: 67 RFTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKG--NNVDQ-LSLYLDATDSATLPY 122
R TWTI+NFS + +Y + F VG +W +L +PKG +++++ LSL+L D LP
Sbjct: 8 RITWTIKNFSSLQSHAIYFDIFVVGDTKWHLLAYPKGYGDSINKCLSLFLGVPDPDDLPS 67
Query: 123 GWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDT 182
GW R+ + LTVVNQ+ S ++ F R +G +PL ELY G++V+
Sbjct: 68 GWKRHIIYRLTVVNQMSEKLSKQEVARGGFYPRSLTFGSQVMLPLTELYG---GFLVSGQ 124
Query: 183 CIVEADVAVRKVI 195
+ A+V V +V+
Sbjct: 125 VKIVAEVGVLEVV 137
>AT2G25320.1 | Symbols: | TRAF-like family protein |
chr2:10781951-10788065 REVERSE LENGTH=1673
Length = 1673
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 13/140 (9%)
Query: 66 GRFTWTIRNFSR----------STKKLYSEDFYVGGYRWRILIFPKGNNVD--QLSLYLD 113
G+FTW I NF+R + + S+ F +G R++++P+G + LS++L+
Sbjct: 403 GKFTWRIENFTRLKDLLKKRKITGLCIKSKRFQIGNRDCRLIVYPRGQSQPPCHLSVFLE 462
Query: 114 ATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDP 173
TDS + WS + L+VVNQ S+ KE+ ++++ DWG+ F+ L L+D
Sbjct: 463 VTDSRS-SSDWSCFVSHRLSVVNQRLEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQ 521
Query: 174 GRGYIVNDTCIVEADVAVRK 193
G++V DT + A+V + K
Sbjct: 522 DSGFLVQDTVVFSAEVLILK 541
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 15/229 (6%)
Query: 65 SGRFTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKGNNV---DQLSLYLDATD-SAT 119
S WT+ +F+R K L+S+ F VGGY R+L++P+G++ +S+YL D T
Sbjct: 70 SALCRWTVESFTRVKAKALWSKYFDVGGYDCRLLVYPRGDSQALPGYISIYLQIMDPRGT 129
Query: 120 LPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIV 179
W +A + L++VN + + +I K++ H+F++++ G+ F + + DP G++
Sbjct: 130 TSSRWDCFASYRLSIVNLVDDSLTIHKDSWHRFSSKKKSHGWCDFTLNSSILDPKMGFLF 189
Query: 180 -NDTCIVEADVAVRKVIDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLY-----HIPYF 233
ND+ ++ AD+ + +S D+ E G K M +L + + F
Sbjct: 190 NNDSLLITADILILNESVSFSRDNNNE-GQSLYKENSIAGPMPDVLSGKFTWKVNNFSLF 248
Query: 234 RKAVYHMPTTENDLPSGSIPLAL---QSLFYKLQYYDSSVATKELTKSF 279
+ + P+G L + QS+ +Y + +KE K+
Sbjct: 249 KDMIKTQKIMSPVFPAGECNLRISVYQSVVNSQEYISMCLESKETEKTL 297
>AT5G43560.2 | Symbols: | TRAF-like superfamily protein |
chr5:17501043-17505526 FORWARD LENGTH=1055
Length = 1055
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
Query: 66 GRFTWTIRNFSRSTKK-LYSEDFYVGGYRWRILIFPKGNNV-DQLSLYLDATDSATLPYG 123
G+ TWTI FS K+ L + F VGGY+W ILI+P+G +V + LSL+L L G
Sbjct: 69 GKNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLFLCVAHHEKLLPG 128
Query: 124 WSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTC 183
WS +AQF++ V N+ S +T H+F +E DWG+ F+ L +L + G+I + C
Sbjct: 129 WSHFAQFTIAVSNKDPKK-SKHSDTLHRFWKKEHDWGWKKFIELPKLKE---GFIDDSGC 184
Query: 184 I-VEADVAV-RKVID 196
+ ++A V V R+ +D
Sbjct: 185 LTIKAQVQVIRERVD 199
>AT5G43560.1 | Symbols: | TRAF-like superfamily protein |
chr5:17501043-17505526 FORWARD LENGTH=1055
Length = 1055
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
Query: 66 GRFTWTIRNFSRSTKK-LYSEDFYVGGYRWRILIFPKGNNV-DQLSLYLDATDSATLPYG 123
G+ TWTI FS K+ L + F VGGY+W ILI+P+G +V + LSL+L L G
Sbjct: 69 GKNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLFLCVAHHEKLLPG 128
Query: 124 WSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTC 183
WS +AQF++ V N+ S +T H+F +E DWG+ F+ L +L + G+I + C
Sbjct: 129 WSHFAQFTIAVSNKDPKK-SKHSDTLHRFWKKEHDWGWKKFIELPKLKE---GFIDDSGC 184
Query: 184 I-VEADVAV-RKVID 196
+ ++A V V R+ +D
Sbjct: 185 LTIKAQVQVIRERVD 199
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 38/271 (14%)
Query: 208 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYYD 267
Y G +N G TCY NS+LQ LY FR+ + ++ L LF ++
Sbjct: 22 YFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFSQISSQK 81
Query: 268 SSVAT-------------KELTKSFGWDTQDSFLQHDVQELNRVL--------------- 299
EL +S+ FL + + EL +L
Sbjct: 82 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETSS 141
Query: 300 -CEKLEDKMKGTVVEGT--------IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDV 350
EK+ + +K + G + K+F+G N C+ + + R E+F DL LD+
Sbjct: 142 SPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDI 201
Query: 351 KGCRDVYDSFDKYVEVERLEGDNKYHAEQ-YGLQEAKKGVLFIDFPPVLQLQLKRFEYDF 409
+ + + E L ++K+ ++ LQEA+K + P +L + LKRF+Y
Sbjct: 202 EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 261
Query: 410 MRDTMVKINDRYEFPLELDLDRGNGKYLSPE 440
K++ R FPLEL L +Y+ E
Sbjct: 262 QLGRYKKLSYRVVFPLELKLSNTVDEYVDIE 292
>AT3G58440.1 | Symbols: | TRAF-like superfamily protein |
chr3:21618446-21621249 REVERSE LENGTH=601
Length = 601
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 67 RFTWTIRNFSRSTKKLYSEDFYVGGYRWRILIFPKGNNVDQ-LSLYLDATDSATLPYGWS 125
+FTW + FS + YS F V G WR+L F KG D+ S+YLD + +LP GW
Sbjct: 10 KFTWVLEKFSSLKDQCYSPVFTVAGCNWRLLSFLKGAKNDRYFSVYLD-LEPGSLPPGWR 68
Query: 126 RYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVND--TC 183
R +FS+T+ N + + F+A+ WGF F+ L +L + G++VND T
Sbjct: 69 REVKFSITLDNVCPNTDRVLGGPCF-FDAKSNIWGFQDFLLLEKLVNIAEGFLVNDRLTI 127
Query: 184 IVEADV 189
+ E DV
Sbjct: 128 VAEVDV 133
>AT3G58220.2 | Symbols: | TRAF-like family protein |
chr3:21564677-21566435 REVERSE LENGTH=453
Length = 453
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 78/134 (58%), Gaps = 8/134 (5%)
Query: 63 SPSGR--FTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKGNNVDQ-LSLYLDATDSA 118
SP G+ F+W I++FS + +YS++F +GG +WR++ +P GN + + +SLY++ DS
Sbjct: 6 SPLGKNEFSWVIKDFSSLGVRAIYSDEFVIGGCKWRLIAYPMGNRIKKYMSLYVEVADSK 65
Query: 119 TLPYGWSRYAQFSLTVVNQIRHNFSIRK-ETHHQFNAREGDWGFTSFMPLAELYDPGRGY 177
LP GWS + + VVN + S +K + F+ + WG+ + + ++L G+
Sbjct: 66 HLPSGWSINTELRMEVVNHNLYKPSQQKYRKNLWFDQKTPSWGYKTMIRHSKLSGE-EGF 124
Query: 178 IVND--TCIVEADV 189
+V+ T +V+ DV
Sbjct: 125 LVSGEVTIVVKIDV 138
>AT3G58240.1 | Symbols: | TRAF-like superfamily protein |
chr3:21568530-21569827 REVERSE LENGTH=317
Length = 317
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 67 RFTWTIRNF-SRSTKKLYSEDFYVGGYRWRILIFPKGNNVDQ-LSLYLDATDSATLPYGW 124
+FTW I+NF S S K +YS+ F +GG +W IL + K + Q L L L+ D LP W
Sbjct: 8 KFTWVIKNFCSVSPKPIYSDQFLIGGNKWHILAYSKKRDGHQFLCLDLELVDCEFLPSEW 67
Query: 125 SRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCI 184
+ + S TVVN S + H FN +E G S L+EL D G++V+
Sbjct: 68 RKVVKVSFTVVNFFSKKLSRQIGLKHCFNKKERSKG-GSLFHLSELTDKKSGFLVDGEVE 126
Query: 185 VEADVAV 191
+ A + V
Sbjct: 127 IVAQITV 133
>AT2G25330.1 | Symbols: | TRAF-like family protein |
chr2:10788946-10791331 REVERSE LENGTH=693
Length = 693
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Query: 70 WTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKGNNV---DQLSLYLDATD-SATLPYGW 124
WT+ +F+R K L+S+ F VGGY R+L++P+G++ +S+YL D T W
Sbjct: 50 WTVESFTRVKAKALWSKYFDVGGYDCRLLVYPRGDSQALPGSISIYLQIIDPRGTSSSLW 109
Query: 125 SRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIV-NDTC 183
+A + L+++N + + +IRK + H+F+ ++ G+ F + + DP G++ ND+
Sbjct: 110 DCFASYQLSIINHVDDSLTIRKNSWHRFSNKKRSHGWCDFTLNSSVLDPKMGFLFNNDSL 169
Query: 184 IVEADVAV 191
++ AD+ +
Sbjct: 170 LITADIMI 177
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 12/140 (8%)
Query: 66 GRFTWTIRNFS--------RSTKKLY--SEDFYVGGYRWRILIFPKGNNV--DQLSLYLD 113
G+F+W I NF+ R LY S+ F +G R++++P+G + LS++L+
Sbjct: 358 GKFSWRIENFTSLVDLLEKRKITGLYIKSKRFQIGNRDCRLIVYPRGQSQPPSHLSIFLE 417
Query: 114 ATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDP 173
TDS + WS + L+VVNQ S+ KE+ ++F+ E DWG+ F+ L L+D
Sbjct: 418 VTDSRSSSSDWSCFVSHRLSVVNQRSEEKSVTKESQNRFSKAEKDWGWREFVTLTSLFDQ 477
Query: 174 GRGYIVNDTCIVEADVAVRK 193
G++V D+ + +V + K
Sbjct: 478 DSGFLVQDSVVFSVEVLMLK 497
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 65 SGRFTWTIRNFSR-----STKKLYSEDFYVGGYRWRILIFPKGNNVDQ-LSLYLDATDS- 117
SG FTWT+ NFS T+K+ S F G RI ++ N + S+ LD+TD+
Sbjct: 202 SGTFTWTVENFSMFKEMIKTQKITSPVFVAGECFLRIGVYQSVVNAQEYFSMCLDSTDTE 261
Query: 118 ATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNA--REGD---WGFTSFMPLAELYD 172
++ S + FS++ +NQ ++ KE++ +F A + GD G+ +M +++ +
Sbjct: 262 KSVLSDKSSWCLFSMSALNQKHGCTNMNKESYGRFAADNKSGDNTGLGWNDYMKMSDFVN 321
Query: 173 PGRGYIVNDTCIVEADVAVRKVIDYWSHDSKKETGYVG 210
P GY+++D + V K ++ + GY+G
Sbjct: 322 PDAGYLLDDKAVFSTSFDVIKEFSSFTKNGTGN-GYMG 358
>AT3G58220.1 | Symbols: | TRAF-like family protein |
chr3:21565173-21566435 REVERSE LENGTH=351
Length = 351
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 78/134 (58%), Gaps = 8/134 (5%)
Query: 63 SPSGR--FTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKGNNVDQ-LSLYLDATDSA 118
SP G+ F+W I++FS + +YS++F +GG +WR++ +P GN + + +SLY++ DS
Sbjct: 6 SPLGKNEFSWVIKDFSSLGVRAIYSDEFVIGGCKWRLIAYPMGNRIKKYMSLYVEVADSK 65
Query: 119 TLPYGWSRYAQFSLTVVNQIRHNFSIRK-ETHHQFNAREGDWGFTSFMPLAELYDPGRGY 177
LP GWS + + VVN + S +K + F+ + WG+ + + ++L G+
Sbjct: 66 HLPSGWSINTELRMEVVNHNLYKPSQQKYRKNLWFDQKTPSWGYKTMIRHSKLSGE-EGF 124
Query: 178 IVND--TCIVEADV 189
+V+ T +V+ DV
Sbjct: 125 LVSGEVTIVVKIDV 138
>AT1G04300.4 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1055
Length = 1055
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 11/115 (9%)
Query: 87 FYVGGYRWRILIFPKGNNV-DQLSLYLDATDSATLPYGWSRYAQFSLTVVNQ--IRHNFS 143
F GGY+W ILI+P+G +V + LSL+L + L GWS++AQF+++V++Q + FS
Sbjct: 71 FEAGGYKWYILIYPQGCDVCNHLSLFLCVANYDKLLPGWSQFAQFTISVLSQDLKKSKFS 130
Query: 144 IRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCI-VEADVAV-RKVID 196
+T H+F +E DWG+ FM L +L D G+I C+ +EA V V R+ +D
Sbjct: 131 ---DTLHRFWKKEHDWGWKKFMELPKLKD---GFIDESGCLTIEAKVQVIRERVD 179
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 124/307 (40%), Gaps = 33/307 (10%)
Query: 209 VGLKNQGATCYMNSLLQTLYHIP----YFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQ 264
GL N G +C+ N + Q L P YF + + T+ + + L K +
Sbjct: 542 CGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQ---CFTCGFEKLVVKAK 598
Query: 265 YYDSSVATKELTKSF--------GWDTQDS--FLQHDVQELNRVLCEKLE-DKMKGTVVE 313
S ++ L +D+ FL+ V + V + E D K + +E
Sbjct: 599 EEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKLE 658
Query: 314 GT--IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CRDVYDSFDKYVEVERLE 370
T I F G+ + I+C+ KS +E DL +++ G + D+ ++ E L+
Sbjct: 659 DTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILD 718
Query: 371 GDNKYHAEQYGLQEAKKGVLFIDFPP-VLQLQLKRFEYDFMRDTMVKINDRYEFPLELDL 429
G+NKY E K L I PP VL + LKRF+ K+N FP LDL
Sbjct: 719 GENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAG----KFGKLNKLIRFPETLDL 774
Query: 430 DRGNGKYLSPEADKSIR-NLYXXXXXXXXXXXXXXXXYFAYIRPTLSNEWFKFDDARVTK 488
Y+S ++KS LY Y YIR N+W+K DD+ V
Sbjct: 775 ----APYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRN--QNKWYKADDSTVVT 828
Query: 489 EDADRAL 495
D +R L
Sbjct: 829 SDVERIL 835
>AT2G32870.1 | Symbols: | TRAF-like family protein |
chr2:13944968-13946776 REVERSE LENGTH=416
Length = 416
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 59 IVDESP-SGRFTWTIRNFSRSTKKLYSE-DFYVGGYRWRILIFPKGNN---VDQLSLYLD 113
+++ SP + RFTW I FS + +S +F VG RW+++++PKGN + LSLYL
Sbjct: 268 LIEFSPKNSRFTWKITQFSSFDGEEHSSYEFTVGPRRWKLVMYPKGNGDGKGNSLSLYLF 327
Query: 114 ATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQF-----NAREGDWGFTSFMPLA 168
A+D T A + L V++Q+ N E + F N + WG F+PL
Sbjct: 328 ASDYVTNGPKGGTLAIYKLRVLDQLNRN-HCETECRYWFPYNPVNQMDSLWGRPKFLPLE 386
Query: 169 ELYDPGRGYIVNDTCIVEADVAVRKVIDY 197
EL+ RG++VND + ++++ +Y
Sbjct: 387 ELHKSSRGFLVNDQIYIGVEISIVSTTEY 415
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 43/266 (16%)
Query: 208 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSG--SIPLALQSLFYKLQY 265
Y G +N G TCY NS+LQ LY FR+ + T+ + ++ L LF ++
Sbjct: 22 YFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFSQISS 81
Query: 266 YDSSVAT-------------KELTKSFGWDTQDSFLQHDVQELNRVL------------- 299
EL +S+ FL + + E+ +L
Sbjct: 82 QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKTEHET 141
Query: 300 -----CEKLEDKMKGTVVEGTIQK---------LFEGHHMNYIECINVDYKSTRKESFYD 345
EK+ + +K G + K +F+G N C+ + + R E+F D
Sbjct: 142 SSSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETFLD 201
Query: 346 LQLDVKGCRDVYDSFDKYVEVERLEGDNKYHAEQ-YGLQEAKKGVLFIDFPPVLQLQLKR 404
L LD++ + + E L ++K+ ++ LQEA+K + P +L + LKR
Sbjct: 202 LSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 261
Query: 405 FEYDFMRDTMVKINDRYEFPLELDLD 430
F+Y K++ R FPLEL L
Sbjct: 262 FKYIEQLGRYKKLSYRVVFPLELKLS 287
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 140/353 (39%), Gaps = 43/353 (12%)
Query: 170 LYDPGRGYI---VNDTCIVEADVAVRKVIDYWSHDSKKETGYVGLKNQGATCYMNSLLQT 226
LY P R YI +D + + + + +W + GL N G TC++ S+LQ
Sbjct: 121 LYRPPRRYIEYESDDDELNKMEPTKPLQLSWWYPRIEPTGVGAGLYNSGNTCFIASVLQC 180
Query: 227 LYH----IPYFRKAVYHMPTTEND-------LPSGSIPLALQSLFYKLQYYDSSVATKEL 275
H I R +Y P + I LAL+S Y +
Sbjct: 181 FTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHIELALRSSGYGINIDRFRDNLTYF 240
Query: 276 TKSFGWDTQD---SFLQHDVQELNRVLCEKLEDKMKGTVVE---GTIQKLFEGHHMNYIE 329
+ F + Q+ FLQ + +L R C ++++ G+V + +F G M+ +
Sbjct: 241 SSDFMINHQEDAHEFLQSFLDKLERC-CLDPKNQL-GSVSSQDLNIVDNVFGGGLMSTLC 298
Query: 330 CINVDYKSTRKESFYDLQLDVKGCRDVYDSFDKYVEVERLEGDNKYHAEQYGLQEAKKGV 389
C N + S E L+++ ++ + + + VE+LE +Q K+ V
Sbjct: 299 CCNCNSVSNTFEPSLGWSLEIEDVNTLWKALESFTCVEKLE-------DQLTCDNCKEKV 351
Query: 390 L------FIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRGNGKYLSPEADK 443
F PPV LKRF D + TM KI D EFPLELDL ++S D
Sbjct: 352 TKEKQLRFDKLPPVATFHLKRFTNDGV--TMEKIFDHIEFPLELDL----SPFMSSNHDP 405
Query: 444 SIRNLYXXXX-XXXXXXXXXXXXYFAYIRPTLSNEWFKFDDARVTKEDADRAL 495
+ Y Y +Y+R + W FDD++VT+ +R L
Sbjct: 406 EVSTRYHLYAFVEHIGIRATFGHYSSYVR-SAPETWHNFDDSKVTRISEERVL 457
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 127/303 (41%), Gaps = 46/303 (15%)
Query: 210 GLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTEND-------------LPSGSI 252
GL N G +CY N++LQ L I Y + ++ + G
Sbjct: 330 GLVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTCRKKSWCFVCEFEHLILKARGGES 389
Query: 253 PLALQSLFYKLQYYDSSVATKELTKSFGWDTQD---SFLQHDVQELNRVLCEKLEDKMKG 309
PL+ + KLQ ++ K G ++ FL+ V + V + E G
Sbjct: 390 PLSPIKILSKLQ---------KIGKHLGPGKEEDAHEFLRCAVDTMQSVFLK--EAPAAG 438
Query: 310 TVVEGT--IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CRDVYDSFDKYVEV 366
E T + F G+ + I+C+ +KS R E DL +++ G + ++ ++
Sbjct: 439 PFAEETTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAY 498
Query: 367 ERLEGDNKYHAEQY-GLQEAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL 425
E L+G+N+Y + Q+AKK ++ ++ P +L + LKRF+ D K++ FP
Sbjct: 499 EVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQ----SDNFGKLSKPIHFPE 554
Query: 426 ELDLDRGNGKYLSP--EADKSIRNLYXXXXXXXXXXXXXXXXYFAYIRPTLSNEWFKFDD 483
LD+ Y+S D + +LY Y YI+ TL +WFK DD
Sbjct: 555 LLDI----SPYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIK-TLDGDWFKIDD 609
Query: 484 ARV 486
+ V
Sbjct: 610 SNV 612
>AT2G42460.1 | Symbols: | TRAF-like family protein |
chr2:17676399-17679247 REVERSE LENGTH=442
Length = 442
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 68 FTWTIRNFSRSTKKLYSEDFYVGGYRWRILIFPKGNNV-DQLSLYLDATDSATLPYGWSR 126
FTW I NFS + S F GG +LI PKG+ D LSLYL + +L GW R
Sbjct: 10 FTWKIENFSGRKFPITSTVFSSGGCECYVLIRPKGDGFEDYLSLYLCVGNPKSLQPGWKR 69
Query: 127 YAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIVE 186
A V+NQ E + F WGF + +PL +L D R + N+T +E
Sbjct: 70 RASLHFIVLNQSGKEVHRTSERYGLFGPEIPGWGFRTALPLTKLQD--RELLENNTLFIE 127
Query: 187 ADVAVRKVI 195
+ V +V+
Sbjct: 128 VYIKVTEVV 136
>AT2G42460.2 | Symbols: | TRAF-like family protein |
chr2:17678018-17679247 REVERSE LENGTH=299
Length = 299
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 68 FTWTIRNFSRSTKKLYSEDFYVGGYRWRILIFPKGNNV-DQLSLYLDATDSATLPYGWSR 126
FTW I NFS + S F GG +LI PKG+ D LSLYL + +L GW R
Sbjct: 10 FTWKIENFSGRKFPITSTVFSSGGCECYVLIRPKGDGFEDYLSLYLCVGNPKSLQPGWKR 69
Query: 127 YAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIVE 186
A V+NQ E + F WGF + +PL +L D R + N+T +E
Sbjct: 70 RASLHFIVLNQSGKEVHRTSERYGLFGPEIPGWGFRTALPLTKLQD--RELLENNTLFIE 127
Query: 187 ADVAVRKVI 195
+ V +V+
Sbjct: 128 VYIKVTEVV 136
>AT4G09770.2 | Symbols: | TRAF-like family protein |
chr4:6154534-6155859 REVERSE LENGTH=297
Length = 297
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 64 PSGRFTWTIRNFSRSTKK--LYSEDFYVGGYRWRILIFPKGNN-VDQLSLYLDATDSATL 120
P +FTW I +FS K YS++F VG +WR+ I PKG+ V LS+Y+ A
Sbjct: 157 PENKFTWKISHFSYIGDKRYYYSDEFVVGDRKWRLKISPKGDKKVRALSVYVQAMAYLPN 216
Query: 121 PYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDW-GFTSFMPLAELYDPGRGYIV 179
S YA+ L ++NQ N I K H ++ GD G + + + +L D +GY+V
Sbjct: 217 AVASSTYAKLRLRLLNQKNSN-HIEKRVFHFYSRENGDGSGISELISVEDLNDESKGYLV 275
Query: 180 NDTCIVEAD---VAVRKVID 196
D+ ++E V+ KV+D
Sbjct: 276 EDSIVLETTLLWVSDTKVVD 295
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 84 SEDFYVGGYRWRILIFPKG----NNVDQLSLYLDATD-SATLPYGWSRYAQFSLTVVNQI 138
S DF VGG++WR++ +P G D +S+Y + A++ A+ + N
Sbjct: 31 SADFDVGGHKWRLIFYPAGKLEEGGKDHVSIYARIENVGASMQID----AELKFFIYNHN 86
Query: 139 RHNFSIRKE-THHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIVEADVAVRKVID 196
+S+ ++ T +N + + GF + ++ DP GYI + CIV ++ V K I+
Sbjct: 87 NKQYSVFQDGTMKHYNKEKKECGFAQMLLFSKFNDPKNGYIDGNACIVGVEIFVIKPIE 145
>AT4G09770.1 | Symbols: | TRAF-like family protein |
chr4:6154534-6155859 REVERSE LENGTH=297
Length = 297
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 64 PSGRFTWTIRNFSRSTKK--LYSEDFYVGGYRWRILIFPKGNN-VDQLSLYLDATDSATL 120
P +FTW I +FS K YS++F VG +WR+ I PKG+ V LS+Y+ A
Sbjct: 157 PENKFTWKISHFSYIGDKRYYYSDEFVVGDRKWRLKISPKGDKKVRALSVYVQAMAYLPN 216
Query: 121 PYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDW-GFTSFMPLAELYDPGRGYIV 179
S YA+ L ++NQ N I K H ++ GD G + + + +L D +GY+V
Sbjct: 217 AVASSTYAKLRLRLLNQKNSN-HIEKRVFHFYSRENGDGSGISELISVEDLNDESKGYLV 275
Query: 180 NDTCIVEAD---VAVRKVID 196
D+ ++E V+ KV+D
Sbjct: 276 EDSIVLETTLLWVSDTKVVD 295
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 84 SEDFYVGGYRWRILIFPKG----NNVDQLSLYLDATD-SATLPYGWSRYAQFSLTVVNQI 138
S DF VGG++WR++ +P G D +S+Y + A++ A+ + N
Sbjct: 31 SADFDVGGHKWRLIFYPAGKLEEGGKDHVSIYARIENVGASMQID----AELKFFIYNHN 86
Query: 139 RHNFSIRKE-THHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIVEADVAVRKVID 196
+S+ ++ T +N + + GF + ++ DP GYI + CIV ++ V K I+
Sbjct: 87 NKQYSVFQDGTMKHYNKEKKECGFAQMLLFSKFNDPKNGYIDGNACIVGVEIFVIKPIE 145
>AT3G20360.1 | Symbols: | TRAF-like family protein |
chr3:7099952-7101589 REVERSE LENGTH=363
Length = 363
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 64 PSGRFTWTIRNFSRSTKKLYSEDFYVGGYRWRILIFPKGNNV---DQLSLYLDATDSATL 120
PS RFTW I+ +S SE+F +GG W + IF G LSLYL+ L
Sbjct: 220 PSPRFTWYIQGYSTLPTDYLSEEFIIGGKSWNLRIFKNGFGAFEGKNLSLYLNLGPQELL 279
Query: 121 ---PYGWSRYAQFSLTVVNQI--RHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGR 175
PY Y + L V NQ + N + + + F+ + WG+ FMPL++L + +
Sbjct: 280 KAKPYD-KVYVRAKLRVPNQFGSQSNLVLERPLDNWFSPQTIGWGYADFMPLSDLRNSSK 338
Query: 176 GYIVNDTCIVEA 187
G++VND +V+
Sbjct: 339 GFLVNDMLVVQV 350
>AT2G32880.1 | Symbols: | TRAF-like family protein |
chr2:13948953-13950505 REVERSE LENGTH=318
Length = 318
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 11/143 (7%)
Query: 65 SGRFTWTIRNFSRSTKKLYSE-DFYVGGYRWRILIFPKGNN---VDQLSLYLDATDSAT- 119
+ RFTW I FS + +S +F VG RW+++++P+G + LSLYL+A++ T
Sbjct: 176 NSRFTWKITKFSSFNGEEHSSYEFTVGPRRWKLVMYPRGTGDGKGNSLSLYLNASNYVTN 235
Query: 120 -LPYGWSRYAQFSLTVVNQI-RHNFSIRKETHHQFNA---REGDWGFTSFMPLAELYDPG 174
P G +A + L V++Q+ R++F I + ++ R WG T F+PL EL+
Sbjct: 236 NGPKG-RTFAVYKLRVLDQLHRNHFEIDCQDWFLYDPVHPRLCSWGRTKFLPLEELHKAS 294
Query: 175 RGYIVNDTCIVEADVAVRKVIDY 197
RG++VND + + + +Y
Sbjct: 295 RGFLVNDQIYIGVEFLIVSTTEY 317
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 109/285 (38%), Gaps = 52/285 (18%)
Query: 208 YVGLKNQGATCYMNSLLQ--------------TLYHIPYFRKAVYHMPTTENDLPSGSIP 253
Y G +N G TCY NS+LQ LY FR+ + ++
Sbjct: 22 YFGFENFGNTCYCNSVLQDWVVDLRSVLHSMFALYFCAPFREQLLEHYANNKADAEENLL 81
Query: 254 LALQSLFYKLQYYDSSVAT-------------KELTKSFGWDTQDSFLQHDVQELNRVL- 299
L LF ++ EL +S+ FL + + EL +L
Sbjct: 82 TCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILE 141
Query: 300 ---------------CEKLEDKMKGTVVEGT--------IQKLFEGHHMNYIECINVDYK 336
EK+ + +K + G + K+F+G N C+ +
Sbjct: 142 KETQATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETV 201
Query: 337 STRKESFYDLQLDVKGCRDVYDSFDKYVEVERLEGDNKYHAEQ-YGLQEAKKGVLFIDFP 395
+ R E+F DL LD++ + + E L ++K+ ++ LQEA+K + P
Sbjct: 202 TARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPP 261
Query: 396 PVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRGNGKYLSPE 440
+L + LKRF+Y K++ R FPLEL L +Y+ E
Sbjct: 262 HILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIE 306
>AT5G26320.1 | Symbols: | TRAF-like family protein |
chr5:9238310-9241236 FORWARD LENGTH=352
Length = 352
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 61 DESPSGRFTWTIRNFS---RSTKKLYSEDFYVGGYRWRILIFPKGNNVD------QLSLY 111
+E PS + TI +FS ++ S F GY+WR ++F GN D ++LY
Sbjct: 56 EERPSSKIV-TITSFSVIKGRSEAFESSTFEAAGYKWRFMLFVNGNQNDPDGGHENMALY 114
Query: 112 LDATDSATLPYGWSRYAQFSLTVVNQIRHNF-SIRKETHHQFNAREGDWGFTSFMPLAEL 170
+ ++ + P GW L V N+ H + ++ T ++ A + WGF + +P L
Sbjct: 115 VGIKETESFPRGWEVNVDLKLFVHNEKLHKYLTVSDGTVKRYEAAKTYWGFGNLIPRTTL 174
Query: 171 YDPGRGYIVNDTCIVEADVAV 191
DP GYI++DT A++++
Sbjct: 175 LDPNEGYILHDTLSFGAEISI 195
>AT4G09780.1 | Symbols: | TRAF-like family protein |
chr4:6159538-6161378 REVERSE LENGTH=427
Length = 427
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 14/140 (10%)
Query: 64 PSGRFTWTIRNFSR--STKKLYSEDFYVGGYRWRILIFPKGN-NVDQLSLYLDATDSATL 120
P+ +FTW I +FS+ K YS++F VG +WRI I PKG+ V LS+Y+ A +
Sbjct: 211 PTNKFTWKISDFSKLGDKKYHYSDEFVVGERKWRIKISPKGDKKVRALSVYVQAMEYLPN 270
Query: 121 PYGWSRYAQFSLTVVNQIRHNFSIRKETHH---------QFNAREGD--WGFTSFMPLAE 169
+ YA+ L ++NQ N ++ T+ F +RE + +G + + + +
Sbjct: 271 AVASTTYAKLKLQLMNQKNTNHIEKRGTYQTSFFLYLVFHFFSREKEDGYGTSELISVED 330
Query: 170 LYDPGRGYIVNDTCIVEADV 189
L D +GY+V DT ++E +
Sbjct: 331 LNDESKGYLVEDTIVLETTL 350
>AT5G26260.1 | Symbols: | TRAF-like family protein |
chr5:9200492-9202153 FORWARD LENGTH=351
Length = 351
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 61 DESPSGRFTWTIRNFS--RSTKKLY-SEDFYVGGYRWRILIF----PKGNNVDQLSLYLD 113
DE PS + TI +FS + + Y S F GY+WR++++ PKG + +SLY
Sbjct: 57 DERPSSKIV-TITSFSVIKDRGEPYESSIFEAAGYKWRLVLYVKGNPKGGINNHISLYAR 115
Query: 114 ATDSATLPYGWSRYAQFSLTVVN-QIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYD 172
++ TLP GW L V N +++ S+ T ++N + +WGFT + L Y+
Sbjct: 116 IEETETLPRGWEVNVDLKLFVHNRKLKKYLSVTDGTVKRYNDAKKEWGFTQLISLPTFYN 175
Query: 173 PGRGYIVNDTCIVEADVAV 191
GY+V DT A++ +
Sbjct: 176 ANEGYLVQDTASFGAEIFI 194
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 68/167 (40%), Gaps = 28/167 (16%)
Query: 43 QPMDAQPETTNLFGAPIVDESPSGRFTWTIRNFSRSTKKLY-SEDFYVGGYRWRILIFPK 101
P + Q + T + P FTW I FS K Y S+DF VG WR+ PK
Sbjct: 196 NPTEKQEKVT------FISNPPDNVFTWKILRFSTLEDKFYYSDDFLVGDRYWRLGFNPK 249
Query: 102 GNNVDQ---LSLYLDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGD 158
G+ + L ++L A + + +L + NQ R H Q +
Sbjct: 250 GSGGGRPHALPIFLYAQGHKANAVVTNTWGAVNLRLKNQ-------RSSNHKQLYS--AA 300
Query: 159 W---------GFTSFMPLAELYDPGRGYIVNDTCIVEADVAVRKVID 196
W G + + ++EL D +GY+VND I EA++ V +
Sbjct: 301 WYPIRSDYGVGVNNIILMSELKDASKGYMVNDAIIFEAEMVKVSVTN 347
>AT2G42480.1 | Symbols: | TRAF-like family protein |
chr2:17685805-17689851 REVERSE LENGTH=743
Length = 743
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 68 FTWTIRNFSRSTKKLYSEDFYVGGYRWRILIFPKGN--NVDQLSLYLDATDSATLPYGWS 125
F + I NFS + S+ F GG W + ++PKG N D +SLYL +S +L GW
Sbjct: 8 FRFEIDNFSEKKDVIASKAFVSGGCEWFLYLYPKGQSLNDDHMSLYLSVANSKSLGSGWK 67
Query: 126 RYAQFSLTVVNQIRHNF--SIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTC 183
R A+F +V+N+ S + F + WG +PL++ + +G++ D
Sbjct: 68 RSAKFYFSVLNESDKELYRSTISQEFCLFCVQALAWGIRKALPLSKFEE--KGFLEKDKL 125
Query: 184 IVEA 187
IVE
Sbjct: 126 IVEV 129
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 68 FTWTIRNFSRSTKKLYSEDFYVGGYRWRILIFP-KGNNVDQLSLYLDATDSATLPYGWSR 126
FT+ I NFS ++S F G W + ++P K NN D +S+YL + +L GW R
Sbjct: 393 FTFEIENFSERKYLIWSPIFISGQCHWFVKVYPIKDNNYDHVSVYLHVANPQSLRPGWKR 452
Query: 127 YAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIV 185
A FSL + NQ I ++ F E + +P +L + G++ ND I+
Sbjct: 453 RAHFSLILSNQSGKEVKIPSDSCDLF-CTELSSSYPKILPPIKLKEE--GFLENDKLII 508
>AT3G58430.1 | Symbols: | TRAF-like family protein |
chr3:21613163-21616174 REVERSE LENGTH=535
Length = 535
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 67 RFTWTIRNFSRSTKKLYSEDFYVGGYRWRILIFPKGNNVDQLSLYLDATDSATLPYGWSR 126
+F W I+NFS +++LYS +G +WR + +P + SL L D +LP GW R
Sbjct: 8 KFCWIIKNFSPQSERLYSVPVLIGDCKWRPIAYPIRDKY--FSLCLQVVDFESLPCGWGR 65
Query: 127 YAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGF 161
Y + LT+ NQ ++ ++ + H F+ + WG
Sbjct: 66 YVELRLTLRNQ-HNSLNLSIKADHCFDEKRTTWGI 99
>AT1G58270.1 | Symbols: ZW9 | TRAF-like family protein |
chr1:21612394-21614089 REVERSE LENGTH=396
Length = 396
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 68 FTWTIRNFSRSTKKLYSED-FYVGGYRWRILIFPKG---NNVDQLSLYLDATDSATLPYG 123
F W + FS Y+ D F GG W + ++P G + LSLYL + S
Sbjct: 254 FEWRLTKFSTRFLDSYTSDSFSSGGRNWALKVYPNGVGNATGNSLSLYLLSDQSND---- 309
Query: 124 WSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTC 183
Y + L V++QI+ N + K+ NA E WGF F+ A++ + +G++VNDT
Sbjct: 310 -KGYVEAKLRVIDQIQSN-NFEKKVAAWPNATENGWGFDRFLSFADIKNTSKGFLVNDTL 367
Query: 184 IVEADVAVRKVIDYWSHDSK 203
+E + DY+SH S
Sbjct: 368 KLEVQILSFSKTDYYSHQSS 387
>AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=924
Length = 924
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 124/300 (41%), Gaps = 38/300 (12%)
Query: 210 GLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTEND-------------LPSGSI 252
GL N G +CY N++LQ+L + Y + + + D L
Sbjct: 439 GLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHVMMLRESGG 498
Query: 253 PLALQSLFYKLQYYDSSVATKELTKSFGWDTQDSFLQHDVQELNRVLCEKL--EDKMKGT 310
PL+ + ++ + + + FL+ V + + E+L E K+
Sbjct: 499 PLSASRILSHMRSINCQIGDGS------QEDAHEFLRLLVASMQSICLERLGGETKVDPR 552
Query: 311 VVEGT-IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CRDVYDSFDKYVEVER 368
+ E T +Q +F G + ++C+ D++S R E+ DL L++ G + D+ ++ E
Sbjct: 553 LQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPED 612
Query: 369 LEGDNKYHAEQY-GLQEAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLEL 427
L+G+N Y + G A+K + + P +L + LKRF+ KIN FP L
Sbjct: 613 LDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQ----EGRYGKINKCISFPEML 668
Query: 428 DLDRGNGKYLSPEAD-KSIRNLYXXXXXXXXXXXXXXXXYFAYIRPTLSNEWFKFDDARV 486
D+ +++ D + LY Y +Y++ L W++ DD+ +
Sbjct: 669 DMI----PFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVK-DLRGNWYRIDDSEI 723
>AT2G05410.1 | Symbols: | TRAF-like family protein |
chr2:1977490-1978553 FORWARD LENGTH=265
Length = 265
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 97 LIFPKGNNV--DQLSLYLDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNA 154
+ +PKG N D SL+L+ D+ +LP GW R+A+ S ++VNQ S RK T H F
Sbjct: 1 MAYPKGINKAHDSFSLFLNVPDNESLPTGWRRHAKVSFSLVNQGSEKLSQRKVTQHWFVQ 60
Query: 155 REGDWGFTSFMPLAELYDPGRGYIVNDTCIVEADVAVRKVI 195
+ WGF + EL + G++VN V A + V +V+
Sbjct: 61 KAFTWGFPVMITHTEL-NAKMGFLVNGELKVVAKIEVLEVV 100
>AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=928
Length = 928
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 124/300 (41%), Gaps = 38/300 (12%)
Query: 210 GLKNQGATCYMNSLLQTLYH----IPYFRKAVYHMPTTEND-------------LPSGSI 252
GL N G +CY N++LQ+L + Y + + + D L
Sbjct: 443 GLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHVMMLRESGG 502
Query: 253 PLALQSLFYKLQYYDSSVATKELTKSFGWDTQDSFLQHDVQELNRVLCEKL--EDKMKGT 310
PL+ + ++ + + + FL+ V + + E+L E K+
Sbjct: 503 PLSASRILSHMRSINCQIGDGS------QEDAHEFLRLLVASMQSICLERLGGETKVDPR 556
Query: 311 VVEGT-IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CRDVYDSFDKYVEVER 368
+ E T +Q +F G + ++C+ D++S R E+ DL L++ G + D+ ++ E
Sbjct: 557 LQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPED 616
Query: 369 LEGDNKYHAEQY-GLQEAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLEL 427
L+G+N Y + G A+K + + P +L + LKRF+ KIN FP L
Sbjct: 617 LDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQ----EGRYGKINKCISFPEML 672
Query: 428 DLDRGNGKYLSPEAD-KSIRNLYXXXXXXXXXXXXXXXXYFAYIRPTLSNEWFKFDDARV 486
D+ +++ D + LY Y +Y++ L W++ DD+ +
Sbjct: 673 DMI----PFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVK-DLRGNWYRIDDSEI 727
>AT3G29580.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:11394675-11395871 REVERSE LENGTH=306
Length = 306
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Query: 67 RFTWTIRNF-SRSTKKLYSEDFYVGGYRWRILIFPKGNNV-DQLSLYLD-ATDSA-TLPY 122
+FTW I+N + ++ L+S F +GG WR++ K NN + LSL L A DSA +
Sbjct: 8 KFTWVIKNVPTLNSDMLFSNYFVIGGCSWRVVAHSKENNFKESLSLTLIVAEDSAQKMGC 67
Query: 123 GWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVN 180
GWSRYA+ T+VNQI S R ET F+ + + + + + + G+IVN
Sbjct: 68 GWSRYAKIIFTLVNQISEILSQRIET--MFDQKSSVFSSETMFSIGKFDEHFAGFIVN 123
>AT3G28220.1 | Symbols: | TRAF-like family protein |
chr3:10524420-10526497 FORWARD LENGTH=370
Length = 370
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 68 FTWTIRNFSRSTKKLY-SEDFYVGGYRWRILIFPKGNNVDQ---LSLYLDATDSATLPYG 123
+ WT+ NFS K+ Y S+ F +GG W + ++P G+ Q LSLY+ A D PY
Sbjct: 239 YKWTLPNFSSLEKQYYVSDKFVIGGRSWALKVYPSGDGEGQGNSLSLYVVAVD--VKPYD 296
Query: 124 WSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTC 183
Y + L ++NQ R + + K+ ++ + WGF F+P A+L D +G +VNDT
Sbjct: 297 -KIYLKAKLRIINQ-RDSKHMEKKVE-SWSDQANSWGFQKFVPFADLKDTSKGLLVNDTL 353
Query: 184 IVEAD 188
+E +
Sbjct: 354 KMEIE 358
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
Query: 76 SRSTKKLYSEDFYVGGYRWRILIFPKGN-----NVDQLSLYLDATDSATLPYGWSRYAQF 130
S + +K S F GGY W ++++PKGN ++ +S+Y+ +S L YA+
Sbjct: 96 SPNAEKYESRPFESGGYNWTLIVYPKGNIKEGAPLNYVSMYVQIDNSTLLNSPKEVYAEV 155
Query: 131 SLTVVNQIRHNFSIRKET-HHQFNAREGDWGFTSFMPLAELYDPGRGYIVN-DTCIVEAD 188
+ N+ + +ET +F + WG+ + P ++ +P G++ + D + D
Sbjct: 156 KFFIYNRKEDKYLTYQETDAKRFFLFKPYWGYGNVRPYTDVANPNAGWLFDGDNVLFGVD 215
Query: 189 VAVRKVIDYW 198
V V +V + W
Sbjct: 216 VFVTEVFNKW 225
>AT3G58380.1 | Symbols: | TRAF-like family protein |
chr3:21597965-21599195 REVERSE LENGTH=307
Length = 307
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Query: 67 RFTWTIRNFSR-STKKLYSEDFYVGGYRWRILIFPKGNNVDQLSLYLDATDSA-TLPYGW 124
+F W I++ + K+ +S+ F + G RWR+L PKG N + Y+ DS +L W
Sbjct: 8 KFVWVIKDLNVFYPKQSHSDPFLIAGSRWRLLALPKGTNYEFFYQYMGVADSCQSLTSSW 67
Query: 125 SRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCI 184
R+ + LT+VN I H SI ++ F+ + + P L G+++
Sbjct: 68 RRHVKLRLTIVNGISHKRSIVTDSDLYFDENLPACSYPTVPPPFNLLARDAGFLICREIT 127
Query: 185 VEADVAVRKVIDYWSHDS 202
+ +V +VI ++D
Sbjct: 128 IVIEVVSLEVIGTSNNDG 145
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 122/317 (38%), Gaps = 54/317 (17%)
Query: 209 VGLKNQGATCYMNSLLQTLYH-IPYFRKAV---YHMPT----------------TENDLP 248
GL N G +C++NS+ Q H +P + Y +P E L
Sbjct: 176 AGLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGNEFFCVIRAIRYHIEAALR 235
Query: 249 SGSIPLALQSLFYKLQYYDSSVATKELTKSFGWDTQDSFLQHDVQELNRVLCEKLE---- 304
P+A F L Y F D Q + Q D E + EKLE
Sbjct: 236 PERCPIAPYFFFDNLNY-------------FSPDFQ-RYQQEDAHEFLQAFLEKLEICGS 281
Query: 305 --DKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYDSFDK 362
+G + T Q +F G ++ + C N DY S E L L+++ + + +
Sbjct: 282 DRTSFRGDI---TSQDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEIEDVDTLGSALES 338
Query: 363 YVEVERLEGDNKYHAEQYGLQEAKKGVLFID-FPPVLQLQLKRFEYDFMRDTMVKINDRY 421
+ VE+L D + + + +K+ L +D P V LKRF+ + + M KI
Sbjct: 339 FTRVEKL--DEQLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLY--MEKIYKHV 394
Query: 422 EFPLELDLDRGNGKYLSPEADKSIRNLYXXXXXXXX-XXXXXXXXYFAYIRPTLSNEWFK 480
+ PLE+DL Y+ + + Y Y +Y+R + W
Sbjct: 395 KIPLEIDLQ----PYMRNIQENEVSTKYHLYALVEHFGYSVAYGHYSSYVR-SAPKIWHH 449
Query: 481 FDDARVTKEDADRALEE 497
FDD++VT+ D D L +
Sbjct: 450 FDDSKVTRIDEDMVLSQ 466
>AT3G46190.1 | Symbols: | TRAF-like family protein |
chr3:16965889-16967345 FORWARD LENGTH=291
Length = 291
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 6/128 (4%)
Query: 68 FTWTIRNFSRSTKKLYSEDFYVGGYR-WRILIFPKGNNVDQLSLYLDATDSATLPYGWSR 126
FTW++ NFS T Y+ D + G R W + ++P G+ V + + S +
Sbjct: 163 FTWSLPNFSTLTLDSYTSDPFSSGDRNWVLKVYPNGDGVGKDNSLSLYLLSESNE---KN 219
Query: 127 YAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDTCIVE 186
Y + +L V+NQI + ++ K NA E WG+ F+PLA+L D +G++V+D VE
Sbjct: 220 YVRATLRVLNQIGSD-NVEKPVEGWPNAAENGWGYQEFIPLADLQDATKGFVVDDLLEVE 278
Query: 187 ADV-AVRK 193
++ A+ K
Sbjct: 279 VEIMAISK 286
>AT3G58400.1 | Symbols: | TRAF-like family protein |
chr3:21602667-21604063 REVERSE LENGTH=316
Length = 316
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 93 RWRILIFPKGNNVDQLSLYLDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQF 152
RW + + N + LSLYL+ D+ +LP+GW R+A+++LT+VNQ E F
Sbjct: 57 RWLQMGY---NFIGYLSLYLEVADNGSLPFGWRRHARYTLTLVNQNSKKSFQPNEVQEWF 113
Query: 153 NAREGDWGFTSFMPLAELYDPGRGYIVNDTCIVEADVAVRKVI 195
+ WG S PL E++ G++VN + A++ + +VI
Sbjct: 114 D-DSIKWGCPSMFPLNEIHAKDSGFLVNGELKIVAEIDILEVI 155
>AT3G58290.3 | Symbols: | TRAF-like superfamily protein |
chr3:21580572-21581861 REVERSE LENGTH=264
Length = 264
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 21/96 (21%)
Query: 67 RFTWTIRNFSRSTKKLYSEDFYVGG------YRWRILIFPKG----------NNVDQLSL 110
+F W I+NFS L +D YV WR+ +P+G NN D LSL
Sbjct: 11 KFVWVIKNFS----SLQLQDCYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGDHLSL 66
Query: 111 YLDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRK 146
YL+ D +LP GW +Y QF TVVNQI + S+++
Sbjct: 67 YLEV-DFESLPCGWRQYTQFRFTVVNQISEHSSVKR 101
>AT4G01390.1 | Symbols: | TRAF-like family protein |
chr4:570242-571595 REVERSE LENGTH=300
Length = 300
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 41 GPQPMDAQPETTNLFGAPIVDESPSGRFTWTIRNFS--RSTKKLYSEDFYVGGYRWRILI 98
G +P A+P T F ++++ + R TW + FS S +F VG +WRI +
Sbjct: 145 GIEP--AKPGTAESFS--LIEKPLNHRVTWMMTMFSSFNPGNVHQSNEFVVGTRKWRIKV 200
Query: 99 FPKGNNVDQ---LSLYLDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAR 155
P+G+ ++ S+YL A YA+F L V++Q+ N + K A
Sbjct: 201 HPRGSMGEKDKSFSVYLSALGFVNNAPKTKTYARFKLRVLDQVSRN-HVEKTISGWLGAE 259
Query: 156 EGD-WGFTSFMPLAELYDPGRGYIVNDTCIVEADVAVRKVIDY 197
D GF FMPL EL DP Y+V D V D V V +Y
Sbjct: 260 PDDRHGFADFMPLGELDDP---YLVKDKLYVGVDFDVISVSNY 299
>AT3G20370.1 | Symbols: | TRAF-like family protein |
chr3:7105481-7107079 FORWARD LENGTH=379
Length = 379
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 76 SRSTKKLYSEDFYVGGYRWRILIFPKGNNVDQLSLYLD---ATDSATLPYGWSRYAQFSL 132
S T+K S F VGGY W +++FP GN D S YL A D++TL YA
Sbjct: 101 STYTEKYVSRPFSVGGYNWTLVVFPNGNKKDSGSGYLSLYVAIDNSTLGQQ-EIYADLRF 159
Query: 133 TVVNQI-RHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVN-DTCIVEADVA 190
+ N+ R F+I+ +F+ + WGF+ +P+ DP +GY+ + D C DV
Sbjct: 160 YIFNKNERKYFTIQDTDVWKFSVFKTMWGFSQVLPIDTFKDPTKGYLYDGDHCEFGVDVT 219
Query: 191 V 191
+
Sbjct: 220 M 220
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 67 RFTWTIRNFSRSTKKLY-SEDFYVGGYRWRILIFPKGNNVDQ---LSLYLDATDSATL-P 121
RFTWTIR FS K Y SE F +GG W I I P G + LS+YL + P
Sbjct: 240 RFTWTIRGFSTLLKNSYLSEVFSIGGRSWNIQINPSGLGTGEGKALSMYLGLNVNEIFRP 299
Query: 122 YGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNA---REGDWGFTSFMPLAELYDPGRGYI 178
Y Y + L +NQ+ + +I +E +N E WGF F+ L D +G++
Sbjct: 300 YE-KIYVRAKLRALNQLNLS-NIERELDIWYNGPGYGEYSWGFPEFIYFPYLTDSSKGFV 357
Query: 179 VNDTCIVEADV 189
ND +V+ ++
Sbjct: 358 KNDVLMVQVEM 368
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 22/223 (9%)
Query: 209 VGLKNQGATCYMNSLLQTLYHIPYF------RKAVYHMPTTENDLPSGSIPLAL--QSLF 260
+GL+N G TCY+NS+LQ L P K H T + P + + +
Sbjct: 24 LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRIA 83
Query: 261 YKLQYYDSSVATKELTKSFGWDTQDSFL--QHDVQELNRVL---CEKLEDKMKGTVVEGT 315
L ++ A +++ + L Q D E R + C ++K G
Sbjct: 84 RSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGN 143
Query: 316 --------IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYDSFDKYVEVE 367
++++F G + ++C++ +S + + D+ L++ V +S K+ + E
Sbjct: 144 EPFNGNSVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSE 203
Query: 368 RLEGDNKYHAEQY-GLQEAKKGVLFIDFPPVLQLQLKRFEYDF 409
L+G+NKY E L A+K + + P +L +QLKRF F
Sbjct: 204 ILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRFGGIF 246
>AT5G26280.1 | Symbols: | TRAF-like family protein |
chr5:9208724-9210403 FORWARD LENGTH=350
Length = 350
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Query: 61 DESPSGRFTWTIRNFS--RSTKKLY-SEDFYVGGYRWRILIFPKGN----NVDQLSLYLD 113
+E PS + TI +FS + + Y S F GY+WR++++ GN D +SLY
Sbjct: 56 EERPSSKIV-TITSFSVIKGRGEPYESSVFEAAGYKWRLVLYVNGNKNDGGNDHISLYAR 114
Query: 114 ATDSATLPYGWSRYAQFSLTVVNQIRHNF-SIRKETHHQFNAREGDWGFTSFMPLAELYD 172
++ +LP GW L V N H + ++ ++N + +WGF +P + Y+
Sbjct: 115 IEETNSLPLGWEVNVDLKLFVHNGKLHKYLTVTDGLVKRYNNAKKEWGFGQLIPRSTFYN 174
Query: 173 PGRGYIVNDTCIVEADVAVRK 193
GY+ DT A++ + K
Sbjct: 175 ANEGYLDQDTGSFGAEIFIVK 195
>AT2G42470.1 | Symbols: | TRAF-like family protein |
chr2:17679887-17685187 REVERSE LENGTH=898
Length = 898
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 68 FTWTIRNFSRSTKKLYSEDFYVGGYRWRILIFPKGNNVDQ-LSLYLDATDSATLPYGWSR 126
T T+ NFS+ + + S F GG W I +PKG+ D LSL+L D +L W R
Sbjct: 492 LTLTVTNFSQKSSPINSPPFPSGGCNWYIKFYPKGSADDNYLSLFLSPDDPKSLGLNWKR 551
Query: 127 YAQFSLTVVNQIRHNFSIRKETHHQFNAREG-DWGFTSFMPLAELYDPGRGYIVNDTCIV 185
A F ++NQ E Q+ + WGF +P +L D + ++ ND +
Sbjct: 552 RANFYFVLLNQSGKELHRTPEIGDQWFCDDSLSWGFPQTLPRKKLLD--KIFLDNDRFNI 609
Query: 186 EADVAVRKVID 196
E + V +V++
Sbjct: 610 EIYIKVIEVVE 620
>AT5G52330.2 | Symbols: | TRAF-like superfamily protein |
chr5:21247596-21249288 REVERSE LENGTH=346
Length = 346
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 10/98 (10%)
Query: 98 IFPKGNNV-DQLSLYLDATDSATLPYGWSRYAQFSLTVVNQ--IRHNFSIRKETHHQFNA 154
++P+G +V + LSL+L + L GWS+ AQF+++V+++ + FS +T H+F
Sbjct: 1 MYPEGCDVSNHLSLFLCVANHDELLPGWSQLAQFTISVMHKDPKKSKFS---DTLHRFWK 57
Query: 155 REGDWGFTSFMPLAELYDPGRGYIVNDTCI-VEADVAV 191
+E DWG+ FM L +L D G+I + C+ +E V V
Sbjct: 58 KEHDWGWKKFMELPKLRD---GFIDDSGCLTIETKVQV 92
>AT1G65050.1 | Symbols: | TRAF-like superfamily protein |
chr1:24164286-24165679 REVERSE LENGTH=228
Length = 228
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 81 KLYSEDFYVGGYRWRILIFPKGNNVDQ----LSLYLDATDSATLPYGWSRYAQFSLTVVN 136
K S F GG+ WR++++PKGN D +S+Y++ S T P Y F +
Sbjct: 33 KYESPPFSSGGHNWRLVVYPKGNEADNGRGFVSMYVECLSSTTPPIDVFVYLTFFVFSEE 92
Query: 137 QIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVN 180
+ R+ SI+ +FN+ + WG + +P+ L D +G+I++
Sbjct: 93 EKRY-LSIQDVEVKRFNSSKTVWGLSQVLPVETLKDRAKGFILS 135
>AT3G58280.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21578617-21579537 REVERSE LENGTH=243
Length = 243
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 120 LPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIV 179
+P GW RY +F +T+VN I S+ K+ F+ +WGF +P L + G+++
Sbjct: 4 IPCGWRRYVEFRMTIVNHISPIHSVDKKGWRWFDENTKNWGFKDMIPAVILNNVNVGFLL 63
Query: 180 NDTCIVEADVAVRKVID 196
N + A+V V + ID
Sbjct: 64 NGEITIIAEVEVHEFID 80
>AT5G26300.1 | Symbols: | TRAF-like family protein |
chr5:9229326-9231033 FORWARD LENGTH=349
Length = 349
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 55 FGAPIV--DESPSGRFTWTIRNFSRSTKKLY---SEDFYVGGYRWRILIFPKGN----NV 105
FG V DE PS + TI NFS ++ S F GY+WR++++ GN
Sbjct: 48 FGGTRVLRDERPSSKIL-TITNFSVIKGRVEPYESSVFEAAGYKWRLVLYVNGNPNDSGN 106
Query: 106 DQLSLYLDATDSATLPYGWSRYAQFSLTVVN-QIRHNFSIRKETHHQFNAREGDWGFTSF 164
D +SLY+ ++ LP GW L + N ++ +I T +N + +WGF
Sbjct: 107 DHISLYVRIEETEYLPRGWEVNVDLKLFIHNGKLNKYLAISDGTLKLYNDAKREWGFGQL 166
Query: 165 MPLAELYDPGRGYIVNDTCIVEADVAVRK 193
+P Y+ GYI D A++ + K
Sbjct: 167 IPHVTFYNT-YGYIEQDIGSFGAEIFIVK 194
>AT4G00780.1 | Symbols: | TRAF-like family protein |
chr4:334779-336120 FORWARD LENGTH=299
Length = 299
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 12/157 (7%)
Query: 47 AQPETTNLFGAPIVDESPSGRFTWTIRNFS--RSTKKLYSEDFYVGGYRWRILIFPKG-- 102
A P T F ++++ + + TW + FS K S +F VG +WR+ + P+G
Sbjct: 148 ANPGTAECFS--LIEKPLNHKVTWMMSKFSSFNPGKAHQSNEFVVGTRKWRLEVHPRGYM 205
Query: 103 -NNVDQLSLYLDATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDW-G 160
S+YL A YA+F L V++Q+ N + + F+A D G
Sbjct: 206 DEKDKSFSVYLSAEGFVNNAPMTKTYAKFKLRVLDQVSWN-HVEESGLSWFDAEPSDQSG 264
Query: 161 FTSFMPLAELYDPGRGYIVNDTCIVEADVAVRKVIDY 197
F FMPL +L +P Y+V D V + V Y
Sbjct: 265 FADFMPLGKLNEP---YLVKDKLYVGVEFEVVSTTYY 298
>AT2G04170.5 | Symbols: | TRAF-like family protein |
chr2:1417660-1419156 REVERSE LENGTH=369
Length = 369
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 61 DESPSGRFTWTIRNFS--RSTKKLY-SEDFYVGGYRWRILIF----PKGNNVDQLSLYLD 113
DE PS + TI +FS + + Y S F GGY+WR++++ + +SLY+
Sbjct: 126 DERPSNKIL-TITSFSVIKGRGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVR 184
Query: 114 ATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKE-THHQFNAREGDWGFTSFMPLAELYD 172
++ +LP GW + L V N + + I K+ ++N + +WG+ +PL D
Sbjct: 185 IEETESLPKGWEVNVELKLFVYNGKQRKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLD 244
Query: 173 PGRGYIVNDTCIVEADV 189
GY+ D A++
Sbjct: 245 TNEGYLEQDIASFGAEI 261
>AT2G04170.4 | Symbols: | TRAF-like family protein |
chr2:1417404-1418711 REVERSE LENGTH=298
Length = 298
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 61 DESPSGRFTWTIRNFS--RSTKKLY-SEDFYVGGYRWRILIF----PKGNNVDQLSLYLD 113
DE PS + TI +FS + + Y S F GGY+WR++++ + +SLY+
Sbjct: 4 DERPSNKIL-TITSFSVIKGRGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVR 62
Query: 114 ATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKE-THHQFNAREGDWGFTSFMPLAELYD 172
++ +LP GW + L V N + + I K+ ++N + +WG+ +PL D
Sbjct: 63 IEETESLPKGWEVNVELKLFVYNGKQRKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLD 122
Query: 173 PGRGYIVNDTCIVEADV 189
GY+ D A++
Sbjct: 123 TNEGYLEQDIASFGAEI 139
>AT2G04170.3 | Symbols: | TRAF-like family protein |
chr2:1417404-1418711 REVERSE LENGTH=298
Length = 298
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 61 DESPSGRFTWTIRNFS--RSTKKLY-SEDFYVGGYRWRILIF----PKGNNVDQLSLYLD 113
DE PS + TI +FS + + Y S F GGY+WR++++ + +SLY+
Sbjct: 4 DERPSNKIL-TITSFSVIKGRGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVR 62
Query: 114 ATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKE-THHQFNAREGDWGFTSFMPLAELYD 172
++ +LP GW + L V N + + I K+ ++N + +WG+ +PL D
Sbjct: 63 IEETESLPKGWEVNVELKLFVYNGKQRKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLD 122
Query: 173 PGRGYIVNDTCIVEADV 189
GY+ D A++
Sbjct: 123 TNEGYLEQDIASFGAEI 139
>AT2G04170.2 | Symbols: | TRAF-like family protein |
chr2:1417404-1419156 REVERSE LENGTH=420
Length = 420
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 61 DESPSGRFTWTIRNFS--RSTKKLY-SEDFYVGGYRWRILIF----PKGNNVDQLSLYLD 113
DE PS + TI +FS + + Y S F GGY+WR++++ + +SLY+
Sbjct: 126 DERPSNKIL-TITSFSVIKGRGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVR 184
Query: 114 ATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKE-THHQFNAREGDWGFTSFMPLAELYD 172
++ +LP GW + L V N + + I K+ ++N + +WG+ +PL D
Sbjct: 185 IEETESLPKGWEVNVELKLFVYNGKQRKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLD 244
Query: 173 PGRGYIVNDTCIVEADV 189
GY+ D A++
Sbjct: 245 TNEGYLEQDIASFGAEI 261
>AT2G04170.1 | Symbols: | TRAF-like family protein |
chr2:1417404-1419156 REVERSE LENGTH=420
Length = 420
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 61 DESPSGRFTWTIRNFS--RSTKKLY-SEDFYVGGYRWRILIF----PKGNNVDQLSLYLD 113
DE PS + TI +FS + + Y S F GGY+WR++++ + +SLY+
Sbjct: 126 DERPSNKIL-TITSFSVIKGRGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNNHISLYVR 184
Query: 114 ATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKE-THHQFNAREGDWGFTSFMPLAELYD 172
++ +LP GW + L V N + + I K+ ++N + +WG+ +PL D
Sbjct: 185 IEETESLPKGWEVNVELKLFVYNGKQRKYLIVKDGIVKRYNDAKKEWGYGKLIPLTTFLD 244
Query: 173 PGRGYIVNDTCIVEADV 189
GY+ D A++
Sbjct: 245 TNEGYLEQDIASFGAEI 261
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 12/186 (6%)
Query: 316 IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CRDVYDSFDKYVEVERLEGDNK 374
IQ +F G + ++C S + E+ DL +++ G + + D++ E L+GDN
Sbjct: 295 IQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNL 354
Query: 375 YHAEQYG-LQEAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRGN 433
Y ++ +A K + P +L + LKRF+ K+N R FP DL
Sbjct: 355 YKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ----GGRFGKLNKRISFPETFDL---- 406
Query: 434 GKYLSPEADKS-IRNLYXXXXXXXXXXXXXXXXYFAYIRPTLSNEWFKFDDARVTKEDAD 492
G Y+S + S + LY Y Y++ N W++ DD+ V K + +
Sbjct: 407 GPYMSGGGEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGN-WYRIDDSEVEKVELE 465
Query: 493 RALEEQ 498
L ++
Sbjct: 466 DVLSQR 471
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 12/186 (6%)
Query: 316 IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CRDVYDSFDKYVEVERLEGDNK 374
IQ +F G + ++C S + E+ DL +++ G + + D++ E L+GDN
Sbjct: 125 IQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNL 184
Query: 375 YHAEQYG-LQEAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRGN 433
Y ++ +A K + P +L + LKRF+ K+N R FP DL
Sbjct: 185 YKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ----GGRFGKLNKRISFPETFDL---- 236
Query: 434 GKYLSPEADKS-IRNLYXXXXXXXXXXXXXXXXYFAYIRPTLSNEWFKFDDARVTKEDAD 492
G Y+S + S + LY Y Y++ N W++ DD+ V K + +
Sbjct: 237 GPYMSGGGEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGN-WYRIDDSEVEKVELE 295
Query: 493 RALEEQ 498
L ++
Sbjct: 296 DVLSQR 301
>AT1G69660.1 | Symbols: | TRAF-like family protein |
chr1:26199623-26200603 REVERSE LENGTH=231
Length = 231
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 67 RFTWTIRNFSRSTKKLYSEDFY-VGGYRWRILIFPKGNNVDQ---LSLYLDATDSATLPY 122
+F+W ++NFS + +Y+ + Y +GG W + ++PKGN+ LSLY+ DS TL
Sbjct: 96 KFSWNLKNFSELKEDVYTSNKYPMGGKEWVLKLYPKGNSRADGKYLSLYVHLADSETLKS 155
Query: 123 GWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAEL 170
+ Q + V+N + N + ++ + WG+ F+ +A L
Sbjct: 156 DEKNFKQGHVRVLNPLGSN-HVEVQSSCWYKESSRGWGWDHFLSIANL 202
>AT2G15710.1 | Symbols: | TRAF-like family protein |
chr2:6842648-6845103 FORWARD LENGTH=365
Length = 365
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 12/147 (8%)
Query: 62 ESPSGRFTWTIRNFSRST-KKLYSEDFYVGGYRWRILIFPKGNNVDQ----LSLYLDATD 116
E P ++ I S+ T K S F GGY WR++I+PKGN D+ +S+Y++ +
Sbjct: 95 EHPPSSYSLKINKLSQLTFDKYESHRFLSGGYNWRLVIYPKGNEKDKGSGFISMYVEFDN 154
Query: 117 ---SATLPYGWSRYAQFSLTVVNQIRHN-FSIRKETHHQFNAREGDWGFTSFMPLAELYD 172
S+T P +A V N+ + F+I+ +FNA WG + + L D
Sbjct: 155 TKVSSTSPM--EVFAYIIFFVYNKKENKYFTIQDVEVKRFNALRTVWGLSQVLSLETFND 212
Query: 173 PGRGYIV-NDTCIVEADVAVRKVIDYW 198
GY + C DV V I W
Sbjct: 213 LENGYTFEGEQCEFGVDVMVASPITKW 239
>AT5G26290.1 | Symbols: | TRAF-like family protein |
chr5:9226079-9227873 FORWARD LENGTH=333
Length = 333
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 60 VDESPSGRFTWTIRNFSRSTKKLY-SEDFYVGGYRWRILIFPKGNNVDQLSLYLDATDSA 118
+ P FTW I +FS K+Y S +F VG W++ + PKG V ++L A
Sbjct: 196 ISNPPDNVFTWKILHFSTLEDKVYQSNEFLVGDRYWKLGLNPKGGLV---PIFLYAQGFK 252
Query: 119 TLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYI 178
+ YA +L + NQ R + + T + + G + +PL+++ D +GY+
Sbjct: 253 ANAVVTTTYAATNLRLKNQ-RSSNHVTTYTAYWYLIPSGLGLGVNTIPLSDVKDASKGYV 311
Query: 179 VNDTCIVEADVAVRKVID 196
VND+ I+E ++ V +
Sbjct: 312 VNDSIIIEVEMLTVSVTN 329
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 61 DESPSGRFTWTIRNFS--RSTKKLY-SEDFYVGGYRWRILIFPKGN----NVDQLSLYLD 113
D+ PS + +I +FS R+ + Y S F GY+WR++++ GN D +SLY
Sbjct: 49 DDRPSDKIL-SITSFSIIRTRPEPYESSVFEAVGYKWRLVLYVNGNEKDGGKDHVSLYAK 107
Query: 114 ATDSATLPYGWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDP 173
++ +LP GW L V N + + I T ++N + G+ +P + YD
Sbjct: 108 IVETESLPVGWEVNVDLKLFVYNGKLNKYLI--VTVKRYNNATKELGYGQLIPQSTFYDG 165
Query: 174 GRGYIVNDTCIVEADVAVRK 193
GY DT A++ + K
Sbjct: 166 NDGYREQDTGTFGAEIYIVK 185
>AT3G22080.1 | Symbols: | TRAF-like family protein |
chr3:7777818-7781718 REVERSE LENGTH=648
Length = 648
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 78 STKKLYSEDFYVGGYRWRILIFPKGNNVDQ----LSLYLDATDSATLPYGWSR-YAQFSL 132
S K S F GGY WR++I+PKGN D +S+Y++ ++ L + +A
Sbjct: 373 SDGKYQSRLFSSGGYNWRMIIYPKGNRKDDGSGFISMYVEIDSTSLLTTPTTEVFADLRF 432
Query: 133 TVVNQIRHN-FSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIV-NDTCIVEADVA 190
V N+ + ++I+ FNA WG +P+ DP GYI D C DV
Sbjct: 433 FVFNKKENKYYTIQHVESKLFNAFRTIWGLAQVLPVDTFTDPKNGYIFEGDQCEFGVDVI 492
Query: 191 V 191
V
Sbjct: 493 V 493
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 67 RFTWTIRNFSRSTKKLY-SEDFYVGGYRWRILIFPKGN---NVDQLSLYLDATDSATLPY 122
+F WT++NFS +Y S +F + +W + ++PKG+ + LSLYL S TL
Sbjct: 513 KFFWTVKNFSELNNNVYTSGNFSMRERKWVLKLYPKGDVKGDRKWLSLYLYLDQSETLKE 572
Query: 123 GWSRYAQFSLTVVNQIRHNFSIRKETHHQFNAREGDWGFTSFMPLAELYDPGRGYIVNDT 182
+ Q L V++ R + + + + + WG+ F+ LAE+ + Y+ DT
Sbjct: 573 SEKIFVQAQLRVLDP-RGSNHVTHKISSWYTSSNTAWGYRKFVSLAEI---PKAYLDKDT 628
Query: 183 CIVEADVAV 191
V+ DV V
Sbjct: 629 LKVQIDVEV 637