Miyakogusa Predicted Gene

Lj5g3v1697380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1697380.1 Non Chatacterized Hit- tr|I1NHV4|I1NHV4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45853 PE,93.67,0,no
description,Six-bladed beta-propeller, TolB-like; no
description,WD40/YVTN repeat-like-containing,CUFF.55747.1
         (458 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G07590.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   807   0.0  

>AT5G07590.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:2401712-2403731 REVERSE LENGTH=458
          Length = 458

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/458 (82%), Positives = 420/458 (91%)

Query: 1   MEFTESYKQTGPCCFSPNARFIAVAVDYRLVIRETLSFKVVQLFSCLDKISYIEWALDSE 60
           MEFTE+YKQTGPCCFSPN+R++AVA DYRLVIR+T SF+VVQLFSCLDKISYIEWALDSE
Sbjct: 1   MEFTEAYKQTGPCCFSPNSRYVAVANDYRLVIRDTFSFQVVQLFSCLDKISYIEWALDSE 60

Query: 61  YILCGLYKRPMIQAWSLAQPEWTCKIDEGPAGIAYARWSPDSRHILTTSDFQLRLTVWSL 120
           YILCGLYK+PMIQAWSL QPEWTCKIDEGPAGI+YARWSPDSRHILTTS+FQLRLTVWSL
Sbjct: 61  YILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTSEFQLRLTVWSL 120

Query: 121 VNTACVHVQLPKHASKGVSFTRDGKFAAICTRRDCKDYINLVSCHTWEIMGLFAVDTLDL 180
           +NTACVHVQ PKH SKGVSF +DGKFAAICTRRDCKDY+NL+SC +WEIMG FAVDTLDL
Sbjct: 121 LNTACVHVQWPKHGSKGVSFNQDGKFAAICTRRDCKDYVNLLSCQSWEIMGSFAVDTLDL 180

Query: 181 ADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLFKYQAYESGLGVKSVSWSPCGQFLAVG 240
           AD+EWSPDDS+IV+WDSPLEYKVLIYSPDGRCLFKYQAYE GLGVK+VSWSPCGQFLA+G
Sbjct: 181 ADLEWSPDDSSIVVWDSPLEYKVLIYSPDGRCLFKYQAYECGLGVKTVSWSPCGQFLAIG 240

Query: 241 SYDQMLRVLNHLTWKTFAEFMHLSTVRGPGYAAVFKEVDEPLQLDMSELCLSDDFPQGND 300
           SYDQMLRVLNHLTWKTFAEF+HLSTVR P  AA+FKE+DEPLQLDMSEL L ++F   N 
Sbjct: 241 SYDQMLRVLNHLTWKTFAEFLHLSTVRAPCSAAIFKEIDEPLQLDMSELSLDENFMPSNY 300

Query: 301 DSPEEPFRVRYEVTEIPINLPFQKPPAEKPNPKQGIGILSWSSDSQYICTRNDSMPTVLW 360
           D+ E    VRYEV E+P+  PFQKPPA+KPNPKQG+G+L+WS DSQYICTRNDSMPT LW
Sbjct: 301 DASEGYISVRYEVMELPVAFPFQKPPADKPNPKQGVGLLAWSKDSQYICTRNDSMPTALW 360

Query: 361 IWDVRHLEVAAILVQKDPIRAAAWDPTSARLVLCTGSTHLYMWTPSGAYCVHVPLPQFNI 420
           IWD+R LEVAAILVQK+PIRAA WDPT  RL+LCTGS+HLYMWTPSGA+CV  PLP F+I
Sbjct: 361 IWDMRLLEVAAILVQKEPIRAAVWDPTCTRLLLCTGSSHLYMWTPSGAFCVCNPLPGFSI 420

Query: 421 TDLKWNSDGSCLLLKDKESFCCAAVPLLPESSEYSSDE 458
           +DLKWN DGSCLLLKDK++FCCA VP LPESS+YSSD+
Sbjct: 421 SDLKWNIDGSCLLLKDKDAFCCATVPSLPESSDYSSDD 458