Miyakogusa Predicted Gene

Lj5g3v1697110.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1697110.2 Non Chatacterized Hit- tr|I1LCH7|I1LCH7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.27,0,TRANSCRIPTION
INITIATION FACTOR IIH-RELATED,NULL; BSD,BSD; seg,NULL; BSD
domain-like,NULL; PH domain,CUFF.55744.2
         (583 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55750.1 | Symbols:  | BSD domain (BTF2-like transcription fa...   598   e-171
AT3G61420.1 | Symbols:  | BSD domain (BTF2-like transcription fa...   578   e-165

>AT1G55750.1 | Symbols:  | BSD domain (BTF2-like transcription
           factors, Synapse-associated proteins and DOS2-like
           proteins) | chr1:20840449-20845135 REVERSE LENGTH=591
          Length = 591

 Score =  598 bits (1541), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 311/595 (52%), Positives = 406/595 (68%), Gaps = 19/595 (3%)

Query: 1   MSSGQVVKRAKYKTTVKGPGTPGILKLTQDKFVFKPNDPTSNNKLDVEFRFIKGHRVTKE 60
           M+ GQ+ K  KYK+TVK PGTPG L++ +   +F PNDP S++KL V  + IK  + TKE
Sbjct: 1   MAGGQIEKLVKYKSTVKDPGTPGFLRIREGMLLFVPNDPKSDSKLKVLTQNIKSQKYTKE 60

Query: 61  GS-KQPLLNLTHAQG-SYIFELESFPDLHVCRELVGNALSKHVEAPK----VTTEEQLST 114
           GS K P LNLT+ Q  S+IFE E++PD+H CR+ +  AL+K    P      T+ EQLS 
Sbjct: 61  GSNKPPWLNLTNKQAKSHIFEFENYPDMHACRDFITKALAKCELEPNKSVVSTSSEQLSI 120

Query: 115 AELTLRLKLLQEDSKLQKLFKELVAGGKLTESEFWATKKKMLDQDESRKSKQRIGFKNSL 174
            EL LR KLL+E+S+LQ+L K+ V    LTE EFWAT+KK+L +D  RKSKQ++G K+ +
Sbjct: 121 KELELRFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQLGLKSMM 180

Query: 175 IFDTKPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFFNFVPKKMTEVDFWNKYFKAEY 234
           +   KP++DGR N+V F LTPEI +QIFA KPAV QAF N+VP KMTE DFW KYF+AEY
Sbjct: 181 VSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEY 240

Query: 235 LHSTKNIIXXXXXXXXXXXXXVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPD 294
           L+STKN               VFLK DEIL  E R K+RRVDPTLDMEADQGDDYTHL D
Sbjct: 241 LYSTKNTAVAAAEAAEDEELAVFLKPDEILARETRHKIRRVDPTLDMEADQGDDYTHLMD 300

Query: 295 HGIFRDGSKEIPEAQHPLYRRTLLQDLNRQGAVVLEGKTLDMETEQPRTVAEVIARRQQE 354
           HGI RDG+ ++ E Q+  ++R+LLQDLNR  AVVLEG+++D+E+E  R VAE + R +Q 
Sbjct: 301 HGIQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQV 360

Query: 355 SDGVRE------EERRNRISKMTQIEDLQAQDDHPFAPLCIKDPRDYFDSQQANAVKTLD 408
           S    E      +ER  R+S++  +EDLQA  + P APL IKDPRDYF+SQQ N V  + 
Sbjct: 361 SKADGETTKDANQERLERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGN-VLNVP 419

Query: 409 DSLAGMEQTRCSLGSEEAYGSLRASISKIKAKGLKDPLLSPEVALKVLNGLTKNISSTKS 468
               G+++        EAYG L+ SI +I+A GL DPL+ PEV+ +V + LT+ I++ K+
Sbjct: 420 RGAKGLKR-----NVHEAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLTRTIATAKN 474

Query: 469 HLGKNSQESVLDLLPSTTKEKLLDHWVCSQELLRHFWSSYPITAQNLISKTARLKEAISQ 528
             GKN +ES LD LP +TK+++L HW   QELL+HFWSSYPIT   L +K  +LK+A+S 
Sbjct: 475 INGKNPRESFLDRLPKSTKDEVLHHWTSIQELLKHFWSSYPITTTYLHTKVGKLKDAMSN 534

Query: 529 IYSKLEEIKVSAQSDLRHQVSLIVHPMQQXXXXXXXXXXXXIKKRNAR-GQKPNG 582
            YSKLE +K S QSDLRHQVSL+V PMQQ            +++R A+ G++PNG
Sbjct: 535 TYSKLEAMKESVQSDLRHQVSLLVRPMQQALDAAFHHYEVDLQRRTAKSGERPNG 589


>AT3G61420.1 | Symbols:  | BSD domain (BTF2-like transcription
           factors, Synapse-associated proteins and DOS2-like
           proteins) | chr3:22727235-22731760 REVERSE LENGTH=579
          Length = 579

 Score =  578 bits (1490), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 303/581 (52%), Positives = 391/581 (67%), Gaps = 18/581 (3%)

Query: 8   KRAKYKTTVKGPGTPGILKLTQDKFVFKPNDPTSNNKLDVEFRFIKGHRVTKEGS-KQPL 66
           KR KYK+ VK PGT G L+L++   +F PNDP S+ KL V+   IK  + TKEGS K P 
Sbjct: 3   KRVKYKSFVKDPGTLGSLELSEVMLLFVPNDPKSDLKLKVQTHNIKSQKYTKEGSNKPPW 62

Query: 67  LNLTHAQG-SYIFELESFPDLHVCRELVGNALSKHVEAPK----VTTEEQLSTAELTLRL 121
           LNLT  QG S+IFE E++PD+H CR+ +  AL+K  E P     +T  EQLS AE  LR 
Sbjct: 63  LNLTSKQGRSHIFEFENYPDMHACRDFITKALAKCEEEPNKLVVLTPAEQLSMAEFELRF 122

Query: 122 KLLQEDSKLQKLFKELVAGGKLTESEFWATKKKMLDQDESRKSKQRIGFKNSLIFDTKPT 181
           KLL+E+S+LQKL K+ V    LTE EFW+T+KK+L +D  RKSKQ++G K+ ++   KP+
Sbjct: 123 KLLRENSELQKLHKQFVESKVLTEDEFWSTRKKLLGKDSIRKSKQQMGLKSMMVSGIKPS 182

Query: 182 SDGRINQVKFQLTPEIKYQIFALKPAVHQAFFNFVPKKMTEVDFWNKYFKAEYLHSTKNI 241
           +DGR N+V F LT EI +QIFA KPAV QAF N+VPKKMTE DFW KYF+AEYL+STKN 
Sbjct: 183 TDGRTNRVTFNLTSEIIFQIFAEKPAVRQAFINYVPKKMTEKDFWTKYFRAEYLYSTKNT 242

Query: 242 IXXXXXXXXXXXXXVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFRDG 301
                         VFLK DEIL  EAR+K+RRVDPTLDM+AD+GDDYTHL DHGI RDG
Sbjct: 243 AVAAAEAAEDEELAVFLKPDEILAQEARQKMRRVDPTLDMDADEGDDYTHLMDHGIQRDG 302

Query: 302 SKEIPEAQHPLYRRTLLQDLNRQGAVVLEGKTLDMETEQPRTVAEVIARRQQESDGVRE- 360
           + +I E Q+   +R+LLQDLNR  AVVLEG+ +++++E  R VAE + R +Q S    E 
Sbjct: 303 TNDIIEPQNDQLKRSLLQDLNRHAAVVLEGRCINVQSEDTRIVAEALTRAKQVSKADGEI 362

Query: 361 -----EERRNRISKMTQIEDLQAQDDHPFAPLCIKDPRDYFDSQQANAVKTLDDSLAGME 415
                +ER  R+S+ T++EDLQA  + P APL IKDPRDYF+SQQ N +     + A   
Sbjct: 363 TKDANQERLERMSRATEMEDLQAPQNFPLAPLSIKDPRDYFESQQGNILSEPRGAKASKR 422

Query: 416 QTRCSLGSEEAYGSLRASISKIKAKGLKDPLLSPEVALKVLNGLTKNISSTKSHLGKNSQ 475
                    EAYG L+ SI  I+  GL DPL+ PEV+ +V + LT+ IS+ K+ LGKN Q
Sbjct: 423 NV------HEAYGLLKESILVIRMTGLSDPLIKPEVSFEVFSSLTRTISTAKNILGKNPQ 476

Query: 476 ESVLDLLPSTTKEKLLDHWVCSQELLRHFWSSYPITAQNLISKTARLKEAISQIYSKLEE 535
           ES LD LP +TK++++ HW   QEL+RHFWSSYPIT   L +K  +LK+A+S  YS L+ 
Sbjct: 477 ESFLDRLPKSTKDEVIHHWTSIQELVRHFWSSYPITTTYLSTKVGKLKDAMSNTYSLLDA 536

Query: 536 IKVSAQSDLRHQVSLIVHPMQQXXXXXXXXXXXXIKKRNAR 576
           +K S QSDLRHQVSL+V PMQQ            +++R A+
Sbjct: 537 MKQSVQSDLRHQVSLLVRPMQQALDAAFQHYESDLQRRTAK 577