Miyakogusa Predicted Gene
- Lj5g3v1692550.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1692550.2 Non Chatacterized Hit- tr|C6TA39|C6TA39_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8837
PE=,90.43,0,WD40,WD40 repeat; WD-REPEAT PROTEIN,NULL; WD40 REPEAT
PROTEIN,NULL; no description,WD40/YVTN repeat-,CUFF.55709.2
(346 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G03020.2 | Symbols: | transducin family protein / WD-40 repe... 578 e-165
AT4G03020.1 | Symbols: | transducin family protein / WD-40 repe... 578 e-165
AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 87 1e-17
AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 84 1e-16
AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 71 1e-12
AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 71 1e-12
AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 66 3e-11
AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 66 3e-11
AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 66 4e-11
AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 | c... 66 4e-11
AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 65 5e-11
AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 65 5e-11
AT3G09080.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 64 2e-10
AT3G16650.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 63 3e-10
AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like superf... 61 9e-10
AT5G08560.2 | Symbols: | transducin family protein / WD-40 repe... 61 1e-09
AT5G08560.1 | Symbols: | transducin family protein / WD-40 repe... 61 1e-09
AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 | chr5:867... 60 2e-09
AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfam... 60 2e-09
AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfam... 60 2e-09
AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40 r... 58 9e-09
AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchles... 55 6e-08
AT5G64730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 54 1e-07
AT5G56130.1 | Symbols: TEX1, AtTEX1, THO3 | Transducin/WD40 repe... 54 2e-07
AT5G54520.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 4e-07
AT3G05090.2 | Symbols: LRS1 | Transducin/WD40 repeat-like superf... 48 8e-06
AT3G05090.1 | Symbols: LRS1 | Transducin/WD40 repeat-like superf... 48 8e-06
AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protei... 48 8e-06
>AT4G03020.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:1331704-1334472 REVERSE LENGTH=493
Length = 493
Score = 578 bits (1491), Expect = e-165, Method: Compositional matrix adjust.
Identities = 274/347 (78%), Positives = 313/347 (90%), Gaps = 1/347 (0%)
Query: 1 MASRAYVSQFSADGSLFVAGFQGSHIKIYNVDKGWKVQKNILTKSLRWTITDTSLSPDQR 60
M SRAYVSQFS DGSLF+AGFQGS I+IYNV+KGWKVQK+IL KSLRWT+TDTSLSPDQR
Sbjct: 125 MDSRAYVSQFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLSPDQR 184
Query: 61 YLVYASMSPIVHIVNVGSSETESVANVTEIHDGLDFSSNDDRGYSFGIFSVKFSTDGREL 120
LVYASMSPIVHIV+VGS TES ANVTEIHDGLDFSS++D GYSFGIFSVKFSTDGRE+
Sbjct: 185 NLVYASMSPIVHIVDVGSGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTDGREV 244
Query: 121 VAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVWDRRCL 180
VAGSS DSIYVYDLEAN++SLR +AH SDVNTVCFADE+ +LI SGSDD+ CKVWDRRC
Sbjct: 245 VAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCF 304
Query: 181 VSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNATC-NPAHRSH 239
+ + KPAGVL+GHLEG+TFIDSRGDGRYFISNGKDQTIKLWDIRKMSS+A + R++
Sbjct: 305 IGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAPARHEVLRNY 364
Query: 240 EWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSPAFSTGQKYIYTGSHNAC 299
EWDYRWMDYPT+A++L HP DQSV+TY+GHSVLRTL+RC+FSPA STGQKYIYTGS+++
Sbjct: 365 EWDYRWMDYPTEARDLKHPLDQSVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSS 424
Query: 300 VYIYDLVTGAQVATLKHHKSPVRDCSWHPFQTMLVSSSWDGDIVKWE 346
VYIYDLV+G +VA LKHH SPVRDC+WHP+ L+SSSWDGD+VKWE
Sbjct: 425 VYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWE 471
>AT4G03020.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:1331704-1334472 REVERSE LENGTH=493
Length = 493
Score = 578 bits (1491), Expect = e-165, Method: Compositional matrix adjust.
Identities = 274/347 (78%), Positives = 313/347 (90%), Gaps = 1/347 (0%)
Query: 1 MASRAYVSQFSADGSLFVAGFQGSHIKIYNVDKGWKVQKNILTKSLRWTITDTSLSPDQR 60
M SRAYVSQFS DGSLF+AGFQGS I+IYNV+KGWKVQK+IL KSLRWT+TDTSLSPDQR
Sbjct: 125 MDSRAYVSQFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLSPDQR 184
Query: 61 YLVYASMSPIVHIVNVGSSETESVANVTEIHDGLDFSSNDDRGYSFGIFSVKFSTDGREL 120
LVYASMSPIVHIV+VGS TES ANVTEIHDGLDFSS++D GYSFGIFSVKFSTDGRE+
Sbjct: 185 NLVYASMSPIVHIVDVGSGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTDGREV 244
Query: 121 VAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVWDRRCL 180
VAGSS DSIYVYDLEAN++SLR +AH SDVNTVCFADE+ +LI SGSDD+ CKVWDRRC
Sbjct: 245 VAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCF 304
Query: 181 VSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNATC-NPAHRSH 239
+ + KPAGVL+GHLEG+TFIDSRGDGRYFISNGKDQTIKLWDIRKMSS+A + R++
Sbjct: 305 IGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAPARHEVLRNY 364
Query: 240 EWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSPAFSTGQKYIYTGSHNAC 299
EWDYRWMDYPT+A++L HP DQSV+TY+GHSVLRTL+RC+FSPA STGQKYIYTGS+++
Sbjct: 365 EWDYRWMDYPTEARDLKHPLDQSVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSS 424
Query: 300 VYIYDLVTGAQVATLKHHKSPVRDCSWHPFQTMLVSSSWDGDIVKWE 346
VYIYDLV+G +VA LKHH SPVRDC+WHP+ L+SSSWDGD+VKWE
Sbjct: 425 VYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWE 471
>AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:18134272-18135303 REVERSE LENGTH=343
Length = 343
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 111/278 (39%), Gaps = 69/278 (24%)
Query: 102 RGYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSH 161
+G+ I + +++DG ++V+ S ++ +D+E K ++ H S VN+ C
Sbjct: 93 KGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPP 152
Query: 162 LIYSGSDDSSCKVWDRRCL-------------------------------------VSKG 184
LI SGSDD + K+WD R + KG
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKG 212
Query: 185 KPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNATCNPAHRSHEWDYR 244
+ L GH + IT + DG Y ++NG D + +WD+R + C H+
Sbjct: 213 EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQ---- 268
Query: 245 WMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSPAFSTGQKYIYTGSHNACVYIYD 304
H+ + L++C +SP G K + GS + V+I+D
Sbjct: 269 ------------------------HNFEKNLLKCSWSP---DGTK-VTAGSSDRMVHIWD 300
Query: 305 LVTGAQVATLKHHKSPVRDCSWHPFQTMLVSSSWDGDI 342
+ + L H V +C +HP + ++ S S D +I
Sbjct: 301 TTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNI 338
>AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18413690-18415223 FORWARD LENGTH=317
Length = 317
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 134/305 (43%), Gaps = 28/305 (9%)
Query: 50 ITDTSLSPDQRYLVYASMSPIVHIVNVGSSETESVANVTEIHDGLDFSSNDDRGYSFGIF 109
++ S D R L AS + + + I+D + + G+ GI
Sbjct: 27 VSSVKFSSDGRLLASASADKTIRTYTINT-----------INDPIAEPVQEFTGHENGIS 75
Query: 110 SVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDD 169
V FS+D R +V+ S ++ ++D+E L ++ H + V F + S++I SGS D
Sbjct: 76 DVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNF-NPQSNMIVSGSFD 134
Query: 170 SSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWD------I 223
+ ++WD V+ GK VL H + +T +D DG +S+ D ++WD +
Sbjct: 135 ETVRIWD----VTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV 190
Query: 224 RKMSSNATCNPAHRSHEWDYRWMDYPTQAKEL---NHPCDQSVATYRGHSVLRTLVRCFF 280
+ + + + + +++ T L N + + TY GH + + F
Sbjct: 191 KTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAF 250
Query: 281 SPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHPFQTMLVSSSWDG 340
S T K I +GS + CV++++L + + L+ H V + + HP + ++ S S D
Sbjct: 251 S---VTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDK 307
Query: 341 DIVKW 345
+ W
Sbjct: 308 TVRIW 312
>AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:3733406-3739363 FORWARD LENGTH=1021
Length = 1021
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 50/247 (20%)
Query: 103 GYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHL 162
G++ + SV F+++ ++AG+S I ++DLE +K+ H S+ + V F
Sbjct: 56 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEF-HPFGEF 114
Query: 163 IYSGSDDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWD 222
+ SGS D++ +VWD R K GH GI+ I+ DGR+ +S G D +K+WD
Sbjct: 115 LASGSSDTNLRVWDTR----KKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWD 170
Query: 223 IR--KMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFF 280
+ K+ C HE R +D+ HP + F
Sbjct: 171 LTAGKLLHEFKC------HEGPIRSLDF--------HPLE------------------FL 198
Query: 281 SPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHPFQTMLVSSSWDG 340
+ TGS + V +DL T + T + + VR ++HP L DG
Sbjct: 199 ----------LATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDG 248
Query: 341 -DIVKWE 346
+ WE
Sbjct: 249 LKVYSWE 255
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 89/229 (38%), Gaps = 45/229 (19%)
Query: 118 RELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVWDR 177
R L+ G + ++ + + + H S V++V F E L+ +G+ K+WD
Sbjct: 29 RLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSE-EVLVLAGASSGVIKLWD- 86
Query: 178 RCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNATCNPAHR 237
+ + K GH + ++ G + S D +++WD RK
Sbjct: 87 ---LEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKG---------- 133
Query: 238 SHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSPAFSTGQKYIYTGSHN 297
C Q TY+GH+ R + FS +++ +G +
Sbjct: 134 ---------------------CIQ---TYKGHT------RGISTIEFSPDGRWVVSGGLD 163
Query: 298 ACVYIYDLVTGAQVATLKHHKSPVRDCSWHPFQTMLVSSSWDGDIVKWE 346
V ++DL G + K H+ P+R +HP + +L + S D + W+
Sbjct: 164 NVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
>AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:1207759-1209066 FORWARD LENGTH=333
Length = 333
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 53/241 (21%)
Query: 102 RGYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSH 161
RG++ +F V F+ +V+GS ++I +++++ K I AH +++V F + S
Sbjct: 125 RGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGS- 183
Query: 162 LIYSGSDDSSCKVWDRR------CLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKD 215
LI S S D SCK+WD + L+ PA ++F +G++ + D
Sbjct: 184 LIVSASHDGSCKIWDAKEGTCLKTLIDDKSPA---------VSFAKFSPNGKFILVATLD 234
Query: 216 QTIKLWDIRKMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTL 275
T+KL N+ + + Y GH+
Sbjct: 235 STLKL----------------------------------SNYATGKFLKVYTGHT---NK 257
Query: 276 VRCFFSPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHPFQTMLVS 335
V C S T KYI +GS + CVY++DL + L+ H V S HP Q + S
Sbjct: 258 VFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISS 317
Query: 336 S 336
S
Sbjct: 318 S 318
>AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=836
Length = 836
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 45/229 (19%)
Query: 118 RELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVWDR 177
R LV G + ++ + L + H S +++V F D + L+ +G+ + K+WD
Sbjct: 30 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF-DASEVLVAAGAASGTIKLWD- 87
Query: 178 RCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNATCNPAHR 237
+ + K L GH +D G +F S D +K+WDIRK
Sbjct: 88 ---LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG---------- 134
Query: 238 SHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSPAFSTGQKYIYTGSHN 297
C + TY+GH+ ++R F+ +++ +G +
Sbjct: 135 ---------------------C---IHTYKGHTRGVNVLR------FTPDGRWVVSGGED 164
Query: 298 ACVYIYDLVTGAQVATLKHHKSPVRDCSWHPFQTMLVSSSWDGDIVKWE 346
V ++DL G + K H+ ++ +HP + +L + S D + W+
Sbjct: 165 NIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 46/245 (18%)
Query: 103 GYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHL 162
G+S GI SV F + AG++ +I ++DLE K+ + H S+ +V F
Sbjct: 57 GHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF-HPFGEF 115
Query: 163 IYSGSDDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWD 222
SGS D++ K+WD R K GH G+ + DGR+ +S G+D +K+WD
Sbjct: 116 FASGSLDTNLKIWDIR----KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD 171
Query: 223 IRKMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSP 282
+ + +SHE + +D+ HP H L
Sbjct: 172 L----TAGKLLTEFKSHEGQIQSLDF--------HP----------HEFL---------- 199
Query: 283 AFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHP-FQTMLVSSSWDGD 341
+ TGS + V +DL T + + + VR S++P +T+L
Sbjct: 200 --------LATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLK 251
Query: 342 IVKWE 346
I WE
Sbjct: 252 IFSWE 256
>AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=837
Length = 837
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 45/229 (19%)
Query: 118 RELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVWDR 177
R LV G + ++ + L + H S +++V F D + L+ +G+ + K+WD
Sbjct: 30 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF-DASEVLVAAGAASGTIKLWD- 87
Query: 178 RCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNATCNPAHR 237
+ + K L GH +D G +F S D +K+WDIRK
Sbjct: 88 ---LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG---------- 134
Query: 238 SHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSPAFSTGQKYIYTGSHN 297
C + TY+GH+ ++R F+ +++ +G +
Sbjct: 135 ---------------------C---IHTYKGHTRGVNVLR------FTPDGRWVVSGGED 164
Query: 298 ACVYIYDLVTGAQVATLKHHKSPVRDCSWHPFQTMLVSSSWDGDIVKWE 346
V ++DL G + K H+ ++ +HP + +L + S D + W+
Sbjct: 165 NIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 46/245 (18%)
Query: 103 GYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHL 162
G+S GI SV F + AG++ +I ++DLE K+ + H S+ +V F
Sbjct: 57 GHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF-HPFGEF 115
Query: 163 IYSGSDDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWD 222
SGS D++ K+WD R K GH G+ + DGR+ +S G+D +K+WD
Sbjct: 116 FASGSLDTNLKIWDIR----KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD 171
Query: 223 IRKMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSP 282
+ + +SHE + +D+ HP H L
Sbjct: 172 L----TAGKLLTEFKSHEGQIQSLDF--------HP----------HEFL---------- 199
Query: 283 AFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHP-FQTMLVSSSWDGD 341
+ TGS + V +DL T + + + VR S++P +T+L
Sbjct: 200 --------LATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLK 251
Query: 342 IVKWE 346
I WE
Sbjct: 252 IFSWE 256
>AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:2701448-2706910 FORWARD LENGTH=839
Length = 839
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 45/229 (19%)
Query: 118 RELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVWDR 177
R LV G + ++ + L + H S +++V F D + L+ +G+ + K+WD
Sbjct: 30 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF-DASEGLVAAGAASGTIKLWD- 87
Query: 178 RCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNATCNPAHR 237
+ + K L GH ++ G +F S D +K+WDIRK
Sbjct: 88 ---LEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKG---------- 134
Query: 238 SHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSPAFSTGQKYIYTGSHN 297
C + TY+GH+ ++R F+ ++I +G +
Sbjct: 135 ---------------------C---IHTYKGHTRGVNVLR------FTPDGRWIVSGGED 164
Query: 298 ACVYIYDLVTGAQVATLKHHKSPVRDCSWHPFQTMLVSSSWDGDIVKWE 346
V ++DL G + K H+ ++ +HP + +L + S D + W+
Sbjct: 165 NVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD 213
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 103 GYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHL 162
G+S GI SV F + AG++ +I ++DLE K+ + H S+ +V F
Sbjct: 57 GHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNF-HPFGEF 115
Query: 163 IYSGSDDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWD 222
SGS D++ K+WD R K GH G+ + DGR+ +S G+D +K+WD
Sbjct: 116 FASGSLDTNLKIWDIR----KKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWD 171
Query: 223 IRKMSSNATCNPAHRSHEWDYRWMDY 248
+ + +SHE + +D+
Sbjct: 172 L----TAGKLLHEFKSHEGKIQSLDF 193
>AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 |
chr4:9023775-9027443 FORWARD LENGTH=486
Length = 486
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 90/238 (37%), Gaps = 45/238 (18%)
Query: 102 RGYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSH 161
+G+ + SV F GS+ +I ++D+ L L + H+ V + ++ ++
Sbjct: 173 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTY 232
Query: 162 LIYSGSDDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLW 221
+ +S DD K WD + + K GHL G+ + ++ G+D ++W
Sbjct: 233 M-FSAGDDKQVKCWD----LEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVW 287
Query: 222 DIRKMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFS 281
DIR + GH T+ F
Sbjct: 288 DIR----------------------------------TKMQIFALSGHD--NTVCSVFTR 311
Query: 282 PAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHPFQTMLVSSSWD 339
P + TGSH+ + +DL G ++TL HHK VR + HP + S+S D
Sbjct: 312 PT----DPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASAD 365
>AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1181
Length = 1181
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 45/206 (21%)
Query: 141 LRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFI 200
+ + H S V++V F D L+ +G+ K+WD V + K GH + +
Sbjct: 52 MSLCGHTSAVDSVAF-DSAEVLVLAGASSGVIKLWD----VEEAKMVRAFTGHRSNCSAV 106
Query: 201 DSRGDGRYFISNGKDQTIKLWDIRKMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCD 260
+ G + S D +K+WDIRK C
Sbjct: 107 EFHPFGEFLASGSSDANLKIWDIRKKG----C---------------------------- 134
Query: 261 QSVATYRGHSVLRTLVRCFFSPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSP 320
+ TY+GHS + +R F+ +++ +G + V ++DL G + K H+ P
Sbjct: 135 --IQTYKGHSRGISTIR------FTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGP 186
Query: 321 VRDCSWHPFQTMLVSSSWDGDIVKWE 346
+R +HP + +L + S D + W+
Sbjct: 187 IRSLDFHPLEFLLATGSADRTVKFWD 212
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 51/229 (22%)
Query: 103 GYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHL 162
G++ + SV F + ++AG+S I ++D+E K+ H S+ + V F
Sbjct: 56 GHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEF-HPFGEF 114
Query: 163 IYSGSDDSSCKVWDRR---CLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIK 219
+ SGS D++ K+WD R C+ + GH GI+ I DGR+ +S G D +K
Sbjct: 115 LASGSSDANLKIWDIRKKGCIQT-------YKGHSRGISTIRFTPDGRWVVSGGLDNVVK 167
Query: 220 LWDIRKMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCF 279
+WD+ + + HE R +D+ HP + F
Sbjct: 168 VWDL----TAGKLLHEFKFHEGPIRSLDF--------HPLE------------------F 197
Query: 280 FSPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHP 328
+ TGS + V +DL T + + + + VR +HP
Sbjct: 198 L----------LATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHP 236
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 102 RGYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSH 161
+G+S GI +++F+ DGR +V+G + + V+DL A KL H + ++ F
Sbjct: 139 KGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDF-HPLEF 197
Query: 162 LIYSGSDDSSCKVWDRRC--LVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIK 219
L+ +GS D + K WD L+ +P G+ I DGR G D ++K
Sbjct: 198 LLATGSADRTVKFWDLETFELIGSTRPEAT------GVRSIKFHPDGRTLFC-GLDDSLK 250
Query: 220 LW 221
++
Sbjct: 251 VY 252
>AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1179
Length = 1179
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 45/206 (21%)
Query: 141 LRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFI 200
+ + H S V++V F D L+ +G+ K+WD V + K GH + +
Sbjct: 52 MSLCGHTSAVDSVAF-DSAEVLVLAGASSGVIKLWD----VEEAKMVRAFTGHRSNCSAV 106
Query: 201 DSRGDGRYFISNGKDQTIKLWDIRKMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCD 260
+ G + S D +K+WDIRK C
Sbjct: 107 EFHPFGEFLASGSSDANLKIWDIRKKG----C---------------------------- 134
Query: 261 QSVATYRGHSVLRTLVRCFFSPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSP 320
+ TY+GHS + +R F+ +++ +G + V ++DL G + K H+ P
Sbjct: 135 --IQTYKGHSRGISTIR------FTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGP 186
Query: 321 VRDCSWHPFQTMLVSSSWDGDIVKWE 346
+R +HP + +L + S D + W+
Sbjct: 187 IRSLDFHPLEFLLATGSADRTVKFWD 212
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 51/229 (22%)
Query: 103 GYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHL 162
G++ + SV F + ++AG+S I ++D+E K+ H S+ + V F
Sbjct: 56 GHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEF-HPFGEF 114
Query: 163 IYSGSDDSSCKVWDRR---CLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIK 219
+ SGS D++ K+WD R C+ + GH GI+ I DGR+ +S G D +K
Sbjct: 115 LASGSSDANLKIWDIRKKGCIQT-------YKGHSRGISTIRFTPDGRWVVSGGLDNVVK 167
Query: 220 LWDIRKMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCF 279
+WD+ + + HE R +D+ HP + F
Sbjct: 168 VWDL----TAGKLLHEFKFHEGPIRSLDF--------HPLE------------------F 197
Query: 280 FSPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHP 328
+ TGS + V +DL T + + + + VR +HP
Sbjct: 198 L----------LATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHP 236
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 102 RGYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSH 161
+G+S GI +++F+ DGR +V+G + + V+DL A KL H + ++ F
Sbjct: 139 KGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDF-HPLEF 197
Query: 162 LIYSGSDDSSCKVWDRRC--LVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIK 219
L+ +GS D + K WD L+ +P G+ I DGR G D ++K
Sbjct: 198 LLATGSADRTVKFWDLETFELIGSTRPEAT------GVRSIKFHPDGRTLFC-GLDDSLK 250
Query: 220 LW 221
++
Sbjct: 251 VY 252
>AT3G09080.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:2776259-2781785 REVERSE LENGTH=1026
Length = 1026
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 118/267 (44%), Gaps = 32/267 (11%)
Query: 103 GYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCF------- 155
G FG ++ S DG+ L AG G ++++YDL+ ++ + + AH +++ ++ F
Sbjct: 383 GSKFGFRALAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFSFPVLTN 442
Query: 156 --ADETSHLIYSGSDDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNG 213
++ S L+ SG + ++D + P G + G +T + +GR +++G
Sbjct: 443 VDSENASSLLASGGKGRAIHIYDVK---RNFDPVGSVCGS-AAVTSVKFACNGRKMLTSG 498
Query: 214 KDQTIKLWDIRKMSSNATCNPAHR---SHEWDYRWMDYPTQAKELNHPCDQSVATYRGHS 270
D+ ++++D+ + +S+ +P+H SH Y PT + D+ + + S
Sbjct: 499 ADR-LQMFDVNRKASSVRLSPSHTQTLSHGTIYDVAVDPTSGLVVTVGQDKKINIFDIES 557
Query: 271 --VLRTL---------VRCFFSPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKS 319
++R+ V+ P+ + Y+ N + D VTG VA H
Sbjct: 558 GKLVRSFKQDRDHGDPVKVILDPSCN----YLVCSYSNRTICFVDFVTGELVAQATGHGE 613
Query: 320 PVRDCSWHPFQTMLVSSSWDGDIVKWE 346
V + P ++S + DG I W+
Sbjct: 614 AVTGVIFLPDCKHIISVASDGCIFVWK 640
>AT3G16650.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:5671133-5675106 FORWARD LENGTH=479
Length = 479
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 93/238 (39%), Gaps = 46/238 (19%)
Query: 102 RGYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSH 161
+G+ + SV F GS+ +I ++D+ L L + H+ V + ++ ++
Sbjct: 167 QGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTY 226
Query: 162 LIYSGSDDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLW 221
+ +S DD K WD + + K GHL G+ + ++ G+D ++W
Sbjct: 227 M-FSAGDDKQVKCWD----LEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVW 281
Query: 222 DIRKMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFS 281
DIR T+ + P D V FS
Sbjct: 282 DIR-------------------------TKMQIFVLPHDSDV----------------FS 300
Query: 282 PAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHPFQTMLVSSSWD 339
+ TGSH++ + +DL G +AT+ +HK VR + HP + VS+S D
Sbjct: 301 VLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASAD 358
>AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like
superfamily protein | chr4:14597728-14599157 FORWARD
LENGTH=321
Length = 321
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 108 IFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGS 167
+ SV +S +G+ L GS +I V+D++ +KL ++ H V ++ F+ +++SGS
Sbjct: 161 VLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGS 220
Query: 168 DDSSCKVWDRRCLVSKGKP-AGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKM 226
DD + D ++GK G + GH + +D+ DG + D+T++LWD+ KM
Sbjct: 221 DDGHVNMHD-----AEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDL-KM 274
Query: 227 SSNATCNPAHRSHEW 241
+ H W
Sbjct: 275 RAAIQTMSNHNDQVW 289
>AT5G08560.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:2771104-2773827 REVERSE LENGTH=589
Length = 589
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 94/231 (40%), Gaps = 44/231 (19%)
Query: 116 DGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVW 175
DG+ ++AG + SI ++DL+ + V+ + D+ L+ S DS ++
Sbjct: 372 DGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLV-SVCKDSVISLF 430
Query: 176 DRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNATCNPA 235
DR V + L+ + IT D +Y + N +Q I+LW+I +P
Sbjct: 431 DREATVER------LIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEG-------DP- 476
Query: 236 HRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSPAFSTGQKYIYTGS 295
+ V+ Y+GH R ++R F Q +I +GS
Sbjct: 477 -------------------------KIVSRYKGHKRSRFIIRSCFG---GYKQAFIASGS 508
Query: 296 HNACVYIYDLVTGAQVATLKHHKSPVRDCSWHPFQT-MLVSSSWDGDIVKW 345
++ VYI+ TG + L H V SW P ML S+S DG I W
Sbjct: 509 EDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
>AT5G08560.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr5:2771104-2773827 REVERSE LENGTH=589
Length = 589
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 94/231 (40%), Gaps = 44/231 (19%)
Query: 116 DGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVW 175
DG+ ++AG + SI ++DL+ + V+ + D+ L+ S DS ++
Sbjct: 372 DGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLV-SVCKDSVISLF 430
Query: 176 DRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNATCNPA 235
DR V + L+ + IT D +Y + N +Q I+LW+I +P
Sbjct: 431 DREATVER------LIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEG-------DP- 476
Query: 236 HRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSPAFSTGQKYIYTGS 295
+ V+ Y+GH R ++R F Q +I +GS
Sbjct: 477 -------------------------KIVSRYKGHKRSRFIIRSCFG---GYKQAFIASGS 508
Query: 296 HNACVYIYDLVTGAQVATLKHHKSPVRDCSWHPFQT-MLVSSSWDGDIVKW 345
++ VYI+ TG + L H V SW P ML S+S DG I W
Sbjct: 509 EDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
>AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 |
chr5:8677117-8682058 FORWARD LENGTH=669
Length = 669
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 28/237 (11%)
Query: 8 SQFSADGSLFVAGFQGSHIKIYNVDKGWKVQKNILTKSLRWTITDTSLSPDQRY------ 61
S S DGSL GF S IK++++ K + L +D S+ P+ R
Sbjct: 358 SSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQA--ENDSSDQSIGPNGRRSYTLLL 415
Query: 62 ----LVY-ASMSPIVHIVNVGSSETESVANVTEIHDGLDFSSNDDRGYSFGIFSVKFSTD 116
VY A+ SP V S++T T+++ L +G+++ ++ +FS
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCY----KGHNYPVWDAQFSPF 471
Query: 117 GRELVAGSSGDSIYVYDLEANKLSLRILA-HMSDVNTVCFADETSHLIYSGSDDSSCKVW 175
G + S + ++ ++ + LRI+A H+SDV+ V + ++ I +GS D + ++W
Sbjct: 472 GHYFASCSHDRTARIWSMDRIQ-PLRIMAGHLSDVDCVQWHPNCNY-IATGSSDKTVRLW 529
Query: 176 DRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNATC 232
D V G+ + +GH + + DGRY S +D TI +WD+ S A C
Sbjct: 530 D----VQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDL----STARC 578
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 81/211 (38%), Gaps = 30/211 (14%)
Query: 162 LIYSGSDDSSCKVWDRRCLVSKGK---------------PAG-----VLMGHLEGITFID 201
L+ G DSS KVWD + G P G +L+GH +
Sbjct: 366 LVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSAT 425
Query: 202 SRGDGRYFISNGKDQTIKLWDIRKMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCDQ 261
G + +S+ D TI+LW K+++N C H WD ++ + +H
Sbjct: 426 FSPPGDFVLSSSADTTIRLWST-KLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTA 484
Query: 262 SVATYRGHSVLRTL------VRCFFSPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLK 315
+ + LR + V C + YI TGS + V ++D+ TG V
Sbjct: 485 RIWSMDRIQPLRIMAGHLSDVDCV---QWHPNCNYIATGSSDKTVRLWDVQTGECVRIFI 541
Query: 316 HHKSPVRDCSWHPFQTMLVSSSWDGDIVKWE 346
H+S V + P + S DG I+ W+
Sbjct: 542 GHRSMVLSLAMSPDGRYMASGDEDGTIMMWD 572
>AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331506 REVERSE LENGTH=653
Length = 653
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 93/239 (38%), Gaps = 46/239 (19%)
Query: 108 IFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGS 167
I S+ +S + +V+G G ++ + N + AH + + F +T S S
Sbjct: 174 IRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFC-KTDLKFCSCS 232
Query: 168 DDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMS 227
DD++ KVWD V + L GH + +D +S GKDQ +KLWD R
Sbjct: 233 DDTTVKVWDFTKCVDESS----LTGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRS-- 286
Query: 228 SNATCNPAHRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSPAFSTG 287
+EL + GH + V+ ++
Sbjct: 287 ------------------------GREL--------CSLHGHKNIVLSVK------WNQN 308
Query: 288 QKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHP-FQTMLVSSSWDGDIVKW 345
++ T S + + +YD+ T ++ + + H V +WHP + VS S DG I W
Sbjct: 309 GNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 367
>AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331557 REVERSE LENGTH=647
Length = 647
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 93/239 (38%), Gaps = 46/239 (19%)
Query: 108 IFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGS 167
I S+ +S + +V+G G ++ + N + AH + + F +T S S
Sbjct: 168 IRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFC-KTDLKFCSCS 226
Query: 168 DDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMS 227
DD++ KVWD V + L GH + +D +S GKDQ +KLWD R
Sbjct: 227 DDTTVKVWDFTKCVDESS----LTGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRS-- 280
Query: 228 SNATCNPAHRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSPAFSTG 287
+EL + GH + V+ ++
Sbjct: 281 ------------------------GREL--------CSLHGHKNIVLSVK------WNQN 302
Query: 288 QKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHP-FQTMLVSSSWDGDIVKW 345
++ T S + + +YD+ T ++ + + H V +WHP + VS S DG I W
Sbjct: 303 GNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 361
>AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40
repeat family protein | chr5:5504541-5509266 REVERSE
LENGTH=876
Length = 876
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 49 TITDTSLSPDQRYLVYASMSPIVHIVNVGSSETESVANVTEIHDGLDFSSNDDRGYSFGI 108
T+T +LSPD + L A S + + ++ ET + H+G +
Sbjct: 62 TLTALALSPDDKLLFSAGHSRQIRVWDL---ETLKCIRSWKGHEG-------------PV 105
Query: 109 FSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCF-ADETSHLIYSGS 167
+ G L + + V+D++ + H V+++ F D +++ SGS
Sbjct: 106 MGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGS 165
Query: 168 DDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMS 227
DD++ +VWD ++ K ++ H +T I DG S G+D+ + LWD+ S
Sbjct: 166 DDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYS 225
Query: 228 SNAT 231
AT
Sbjct: 226 CKAT 229
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 44/271 (16%)
Query: 103 GYSFGIFSVKFSTDGRELVAGSSG-DSIYVYDLEANKLSLRILAHMSDVNTV--CFADET 159
GY+ I +KF D + +A ++ + + VYD+ S + H V ++ C +
Sbjct: 356 GYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSG 415
Query: 160 SHLIYSGSDDSSCKVWD---RRCLVSKGKPAGVLMGHLEGITFID-SRGDGRYFISNGKD 215
+ LI +GS D + ++W+ + C+ GV GH I + ++ +F+S D
Sbjct: 416 NVLIVTGSKDKTVRLWNATSKSCI-------GVGTGHNGDILAVAFAKKSFSFFVSGSGD 468
Query: 216 QTIKLWDIRKMS--SNATCNPAHRS----HEWDYRWMDYPTQAKELNHPCDQS------- 262
+T+K+W + +S S N RS H+ D ++ A+ + C S
Sbjct: 469 RTLKVWSLDGISEDSEEPINLKTRSVVAAHDKD---INSVAVARNDSLVCTGSEDRTASI 525
Query: 263 --------VATYRGHSVLRTLVRCFFSPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATL 314
V T +GH R FS FST + + T S + V I+ + G+ + T
Sbjct: 526 WRLPDLVHVVTLKGHK------RRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTF 579
Query: 315 KHHKSPVRDCSWHPFQTMLVSSSWDGDIVKW 345
+ H S V S+ T VS DG + W
Sbjct: 580 EGHTSSVLRASFITDGTQFVSCGADGLLKLW 610
>AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchless
protein, putative | chr5:21401423-21404203 FORWARD
LENGTH=473
Length = 473
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 86/220 (39%), Gaps = 50/220 (22%)
Query: 103 GYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHL 162
G++ + V FS DG++L +GS ++ ++DL H + V TV ++ + HL
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHL 166
Query: 163 IYSGSDDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSR-----GDGRYFISNGKDQT 217
+ SGS W+ + +G P L GH + IT I R F+++ KD
Sbjct: 167 V-SGSKSGEICCWNPKKGELEGSP---LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGD 222
Query: 218 IKLWDIRKMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCDQSVATYRGHSVLRTLVR 277
++WDI +S+ GH++ T V+
Sbjct: 223 ARIWDIT----------------------------------LKKSIICLSGHTLAVTCVK 248
Query: 278 CFFSPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHH 317
G IYTGS + + +++ G + LK H
Sbjct: 249 W-------GGDGIIYTGSQDCTIKMWETTQGKLIRELKGH 281
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 72 HIVNVGSSETESVANVTEI-HDGLDFSSNDDRGYSFGIFSVKFSTDGRELVAGSSGDSIY 130
H +N + TE V H G + N+++ + ++ LV+GS +++
Sbjct: 283 HWINSLALSTEYVLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPERLVSGSDDFTMF 342
Query: 131 VYDLEANKL-SLRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVWDRRCLVSKGKPAGV 189
+++ +K R+ H VN V F+ + I S S D S ++W+ G+ V
Sbjct: 343 LWEPSVSKQPKKRLTGHQQLVNHVYFSPD-GKWIASASFDKSVRLWNG----ITGQFVTV 397
Query: 190 LMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIR 224
GH+ + + D R +S KD T+K+W+IR
Sbjct: 398 FRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIR 432
>AT5G64730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:25873146-25875021 FORWARD LENGTH=299
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 103/242 (42%), Gaps = 15/242 (6%)
Query: 111 VKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDDS 170
V ++D + + +Y +D+ ++ + H +VN V F D +S ++ +G D
Sbjct: 66 VHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFD-R 124
Query: 171 SCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIR---KMS 227
S +VWD C +P ++ L+ T + I D T++ +D+R +MS
Sbjct: 125 SLRVWD--CRSHSVEPVQIIDTFLD--TVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMS 180
Query: 228 SN--ATCNPAHRSHEWDYRWMD-YPTQAKELNHPCDQSVATYRGHSVLRTLVRCFFSPAF 284
N N S++ + + + L+ + + Y+GH C
Sbjct: 181 DNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDC----CL 236
Query: 285 STGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHPFQTMLVSSSWDGDIVK 344
+ ++ GS + V+ +DLV ++ + H V S+HP + +++SS DG I
Sbjct: 237 TNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRV 296
Query: 345 WE 346
W+
Sbjct: 297 WK 298
>AT5G56130.1 | Symbols: TEX1, AtTEX1, THO3 | Transducin/WD40
repeat-like superfamily protein | chr5:22722755-22725065
REVERSE LENGTH=315
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 36/260 (13%)
Query: 98 SNDDRGYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLS----LRILAHMSDVNTV 153
S + +G+ + SV ++++G +L +GS + ++++E + S L + H V+ +
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 154 CFADETSHLIYSGSDDSSCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNG 213
C+ + S L+ + S D S ++WD R K L G IT+ + DG +
Sbjct: 73 CWDPKHSDLVATASGDKSVRLWDARS--GKCTQQVELSGENINITY---KPDGTHVAVGN 127
Query: 214 KDQTIKLWDIRKMSSNATCNPAHRSHEWDYRWMDYPTQAKELNHPCD----------QSV 263
+D + + D+RK P HR R +Y N P D V
Sbjct: 128 RDDELTILDVRKF------KPLHR------RKFNYEVNEIAWNMPGDFFFLTTGLGTVEV 175
Query: 264 ATYRGHSVLRTLVR----CFFSPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKS 319
+Y L TL C + A +Y GS ++ V ++D+ + T +
Sbjct: 176 LSYPSLKPLDTLTAHTAGC-YCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEW 234
Query: 320 PVRDCSWHPFQTMLVSSSWD 339
PVR S++ + S+S D
Sbjct: 235 PVRTISFNYSGEYIASASED 254
>AT5G54520.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:22146781-22149089 REVERSE LENGTH=457
Length = 457
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 33/258 (12%)
Query: 111 VKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDDS 170
VK+S G L++ + ++D+E + + V V F + ++ SG
Sbjct: 211 VKWSKQGLSLLSCGYDCTSRLFDVERG-VETQSFKEDEVVGVVKFHPDNCNVFLSGGSKG 269
Query: 171 SCKVWDRRCLVSKGKPAGVLMGHLEGITFIDSRGDGRYFIS-------NGKDQTIKLWDI 223
S ++WD R K + L I ++ G+ FIS N + + +WDI
Sbjct: 270 SLRLWDIRA----NKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDI 325
Query: 224 RK---MSSNA-----TCNPAHRSHEWDYRWM-----DYPTQAKELNHPCD-QSVATYRGH 269
+ +S+ TC P + H D ++ +Y T N P + GH
Sbjct: 326 SREVPLSNQVYVEAYTC-PCIKRHPQDPVFIAQSHGNY-TAIFSTNPPFKLNKYKRFEGH 383
Query: 270 SVLRTLVRCFFSPAFSTGQKYIYTGSHNACVYIYDLVTGAQVATLKHHKSPVRDCSWHPF 329
V ++C FSP T + +GS + VY+YD + A + LK ++ P + S+HP
Sbjct: 384 WVAGFPIKCNFSPDGET----LASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPV 439
Query: 330 QTMLVSS-SWDGDIVKWE 346
+V++ SW+G + +E
Sbjct: 440 LPNVVAACSWNGQVSVFE 457
>AT3G05090.2 | Symbols: LRS1 | Transducin/WD40 repeat-like
superfamily protein | chr3:1418573-1422723 REVERSE
LENGTH=753
Length = 753
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 69 PIVHIVNVGSSETESVANVTEIHDGLDFSSNDDRGYSFGIFSVKFSTDGRELVAGSSGDS 128
P+ + VGSS SV + + H ++ +G+ ++++ + G LV+G +
Sbjct: 181 PVTSLRTVGSSNNISVQS-SPSHG---YTPTIAKGHKESVYALAMNDTGTMLVSGGTEKV 236
Query: 129 IYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVWD---RRCLVSKGK 185
+ V+D S+++ H +V V D T SGS DS ++WD +RCL +
Sbjct: 237 LRVWDPRTGSKSMKLRGHTDNVR-VLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAV 295
Query: 186 PAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNATCNPAH 236
H + + + + S G+DQ + L D+ S C H
Sbjct: 296 -------HTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEH 339
>AT3G05090.1 | Symbols: LRS1 | Transducin/WD40 repeat-like
superfamily protein | chr3:1418573-1422723 REVERSE
LENGTH=753
Length = 753
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 69 PIVHIVNVGSSETESVANVTEIHDGLDFSSNDDRGYSFGIFSVKFSTDGRELVAGSSGDS 128
P+ + VGSS SV + + H ++ +G+ ++++ + G LV+G +
Sbjct: 181 PVTSLRTVGSSNNISVQS-SPSHG---YTPTIAKGHKESVYALAMNDTGTMLVSGGTEKV 236
Query: 129 IYVYDLEANKLSLRILAHMSDVNTVCFADETSHLIYSGSDDSSCKVWD---RRCLVSKGK 185
+ V+D S+++ H +V V D T SGS DS ++WD +RCL +
Sbjct: 237 LRVWDPRTGSKSMKLRGHTDNVR-VLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAV 295
Query: 186 PAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIKLWDIRKMSSNATCNPAH 236
H + + + + S G+DQ + L D+ S C H
Sbjct: 296 -------HTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEH 339
>AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protein /
small nuclear ribonucleoprotein Prp4p-related |
chr2:17304319-17306855 REVERSE LENGTH=554
Length = 554
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 102 RGYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHMSDVNTVCFADETSH 161
+G+ +FSV FS +G L +G + ++DL K I AH + V+ V + + +
Sbjct: 420 QGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGY 479
Query: 162 LIYSGSDDSSCKVWDRR--CLVSKGKPAGVLMGHLEGITFIDSRGDGRYFISNGKDQTIK 219
+ + S D +W R LV L GH + +D D + D+TIK
Sbjct: 480 FLATASYDMKVNIWSGRDFSLVKS------LAGHESKVASLDITADSSCIATVSHDRTIK 533
Query: 220 LW 221
LW
Sbjct: 534 LW 535