Miyakogusa Predicted Gene

Lj5g3v1681410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1681410.1 Non Chatacterized Hit- tr|I1L7Z4|I1L7Z4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57715 PE,85.94,0,GTPASE
ACTIVATING PROTEIN,NULL; MKIAA1688 PROTEIN,NULL; RHOGAP,Rho
GTPase-activating protein domain;,CUFF.55691.1
         (447 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G03100.1 | Symbols:  | Rho GTPase activating protein with PAK...   484   e-137
AT5G22400.1 | Symbols:  | Rho GTPase activating protein with PAK...   393   e-109
AT2G46710.1 | Symbols:  | Rho GTPase activating protein with PAK...   385   e-107
AT3G11490.1 | Symbols:  | rac GTPase activating protein | chr3:3...   367   e-102
AT1G08340.1 | Symbols:  | Rho GTPase activating protein with PAK...   349   3e-96

>AT4G03100.1 | Symbols:  | Rho GTPase activating protein with
           PAK-box/P21-Rho-binding domain | chr4:1374361-1375913
           FORWARD LENGTH=430
          Length = 430

 Score =  484 bits (1247), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 235/302 (77%), Positives = 265/302 (87%), Gaps = 11/302 (3%)

Query: 45  RKSMVACRVD-RPDEA------ISTVHQMEIGWPTDVQHITHVTFDRFNGFLGLPVEFEV 97
           RKS+V+CRVD R D+        S VH MEIGWPT+V+HITHVTFDRF+GFLGLP E +V
Sbjct: 50  RKSVVSCRVDNRQDDGGVGGGISSAVHHMEIGWPTNVRHITHVTFDRFHGFLGLPHELQV 109

Query: 98  EIPGRVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPE 157
           EIP RVPSASVSVFGVSAESMQCSYD KGNSVPTILLLMQERLYSQ GLKAEGIFRINPE
Sbjct: 110 EIPCRVPSASVSVFGVSAESMQCSYDEKGNSVPTILLLMQERLYSQQGLKAEGIFRINPE 169

Query: 158 NSQEEHVRNQLNRGIVPDDIDVHCLAGLIKAWFRELPQGVLDGLSPEQVLQCNTEEESIE 217
           NSQEEHVR+QLNRGIVP++IDVHCLAGLIKAWFRELP GVLDGLSPE+VL CNTE+ES+E
Sbjct: 170 NSQEEHVRDQLNRGIVPENIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLNCNTEDESVE 229

Query: 218 LVKQLKPTETALLNWAIDLMADVVEDEECNKMNARNIAMVFAPNMTQMSDPLTALMHAVQ 277
           L+KQLKPTE+ALLNWA+DLMADVVE+EE NKMNARNIAMVFAPNMTQM+DPLTALMHAVQ
Sbjct: 230 LIKQLKPTESALLNWAVDLMADVVEEEESNKMNARNIAMVFAPNMTQMTDPLTALMHAVQ 289

Query: 278 VMNLLKTLIMKTLREREETATG--GYSPMSFHSSDRRSEAEYDSQREMDTSGELRGAKSD 335
           VMNLLKTLI KTL EREE ATG  GYSP   HSS+ +++++ D+ ++M+ S E +   S+
Sbjct: 290 VMNLLKTLITKTLAEREENATGSEGYSPS--HSSNSQTDSDSDNAQDMEVSCESQATDSE 347

Query: 336 CG 337
           CG
Sbjct: 348 CG 349


>AT5G22400.1 | Symbols:  | Rho GTPase activating protein with
           PAK-box/P21-Rho-binding domain | chr5:7423050-7425335
           REVERSE LENGTH=466
          Length = 466

 Score =  393 bits (1009), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/292 (65%), Positives = 230/292 (78%), Gaps = 22/292 (7%)

Query: 45  RKSMVACRVDRPDEAISTVHQMEIGWPTDVQHITHVTFDRFNGFLGLPVEFEVEIPGRVP 104
           R+S+++C+ +R +     +  MEIGWPT+V+H+ HVTFDRFNGFLGLPVEFE E+P R P
Sbjct: 99  RRSLISCKSNRRE-----LCSMEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRAP 153

Query: 105 SASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENSQEEHV 164
           SAS +VFGVS ESMQ SYDS+GN VPTILLLMQ  LYSQGGL+AEGIFR+  ENS+EE V
Sbjct: 154 SASATVFGVSTESMQLSYDSRGNCVPTILLLMQNCLYSQGGLQAEGIFRLTAENSEEEAV 213

Query: 165 RNQLNRGIVPDDIDVHCLAGLIKAWFRELPQGVLDGLSPEQVLQCNTEEESIELVKQLKP 224
           R QLNRG +P+ IDVHCLAGLIKAWFRELP  VLD LSPEQV+QC TEEE++ELV+ L P
Sbjct: 214 REQLNRGFIPERIDVHCLAGLIKAWFRELPTSVLDSLSPEQVMQCQTEEENVELVRLLPP 273

Query: 225 TETALLNWAIDLMADVVEDEECNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKT 284
           TE ALL+WAI+LMADVV+ E  NKMN+RNIAMVFAPNMTQM DPLTALM+AVQVMN LKT
Sbjct: 274 TEAALLDWAINLMADVVQYEHLNKMNSRNIAMVFAPNMTQMDDPLTALMYAVQVMNFLKT 333

Query: 285 LIMKTLREREETA--------------TGGYSP---MSFHSSDRRSEAEYDS 319
           LI KTLRER+++               +G  SP   ++F++S++  E + D+
Sbjct: 334 LIEKTLRERQDSVVEQAHAFPLEPSDESGHQSPSQSLAFNTSEQSEETQSDN 385


>AT2G46710.1 | Symbols:  | Rho GTPase activating protein with
           PAK-box/P21-Rho-binding domain | chr2:19192105-19194656
           FORWARD LENGTH=455
          Length = 455

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 182/251 (72%), Positives = 216/251 (86%), Gaps = 3/251 (1%)

Query: 45  RKSMV-ACRVDRPDEAISTVHQMEIGWPTDVQHITHVTFDRFNGFLGLPVEFEVEIPGRV 103
           RKS+V +C ++R ++ +  V  M+IGWPT+V+H++HVTFDRFNGFLGLP E E E+P R 
Sbjct: 83  RKSLVMSCAMERGEDDV--VASMDIGWPTEVKHVSHVTFDRFNGFLGLPSELEPEVPPRA 140

Query: 104 PSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENSQEEH 163
           PSASVSVFGVSA+SMQCSYD +GNSVPTILL MQ+RLY++GGLKAEGIFRINP+N +EEH
Sbjct: 141 PSASVSVFGVSAKSMQCSYDDRGNSVPTILLRMQKRLYTEGGLKAEGIFRINPDNGKEEH 200

Query: 164 VRNQLNRGIVPDDIDVHCLAGLIKAWFRELPQGVLDGLSPEQVLQCNTEEESIELVKQLK 223
           VR QLN G+VP  IDVHCLAGLIKAWFRELP GVLD L+PEQV++CNTEE+   LV  L 
Sbjct: 201 VRRQLNCGVVPRGIDVHCLAGLIKAWFRELPTGVLDVLTPEQVMRCNTEEDCSRLVILLP 260

Query: 224 PTETALLNWAIDLMADVVEDEECNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLK 283
           P E+A+L+WAI LMADVVE E+ NKMNARN+AMVFAPNMTQM+DPLTAL+HAVQVMN LK
Sbjct: 261 PVESAILDWAIGLMADVVEHEQFNKMNARNVAMVFAPNMTQMADPLTALIHAVQVMNFLK 320

Query: 284 TLIMKTLRERE 294
           TLI+  L+ERE
Sbjct: 321 TLILMNLKERE 331


>AT3G11490.1 | Symbols:  | rac GTPase activating protein |
           chr3:3617523-3619567 REVERSE LENGTH=435
          Length = 435

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 170/231 (73%), Positives = 202/231 (87%)

Query: 66  MEIGWPTDVQHITHVTFDRFNGFLGLPVEFEVEIPGRVPSASVSVFGVSAESMQCSYDSK 125
           MEIG PTDV+H+ HVTFDRF+GFLGLPVEFE E+P R PSAS +VFGVS ESMQ SYD++
Sbjct: 91  MEIGVPTDVRHVAHVTFDRFHGFLGLPVEFEPEVPRRAPSASATVFGVSTESMQLSYDTR 150

Query: 126 GNSVPTILLLMQERLYSQGGLKAEGIFRINPENSQEEHVRNQLNRGIVPDDIDVHCLAGL 185
           GN VPTILL+MQ  LYS+GGL+ EGIFRIN EN QEE++R +LN+GI+PD+IDVHCLA L
Sbjct: 151 GNIVPTILLMMQSHLYSRGGLRVEGIFRINGENGQEEYIREELNKGIIPDNIDVHCLASL 210

Query: 186 IKAWFRELPQGVLDGLSPEQVLQCNTEEESIELVKQLKPTETALLNWAIDLMADVVEDEE 245
           IKAWFRELP GVLD LSPEQV++  +E+E +ELV+ L  TE +LL+WAI+LMADVVE E+
Sbjct: 211 IKAWFRELPSGVLDSLSPEQVMESESEDECVELVRLLPSTEASLLDWAINLMADVVEMEQ 270

Query: 246 CNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREET 296
            NKMNARNIAMVFAPNMTQM DPLTALM+AVQVMN LKTLI+KTL++R+E+
Sbjct: 271 LNKMNARNIAMVFAPNMTQMLDPLTALMYAVQVMNFLKTLIVKTLKDRKES 321


>AT1G08340.1 | Symbols:  | Rho GTPase activating protein with
           PAK-box/P21-Rho-binding domain | chr1:2631308-2632669
           FORWARD LENGTH=331
          Length = 331

 Score =  349 bits (895), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 158/233 (67%), Positives = 199/233 (85%)

Query: 66  MEIGWPTDVQHITHVTFDRFNGFLGLPVEFEVEIPGRVPSASVSVFGVSAESMQCSYDSK 125
           M+IG PT+++H+ HVTFDRF+GFLGLP EFE ++P + PSAS +VFGVS ESMQ SYDS+
Sbjct: 1   MDIGGPTNIRHVAHVTFDRFDGFLGLPSEFEPDVPRKAPSASATVFGVSTESMQLSYDSR 60

Query: 126 GNSVPTILLLMQERLYSQGGLKAEGIFRINPENSQEEHVRNQLNRGIVPDDIDVHCLAGL 185
           GN VP ILLL+Q RLY QGGL+AEG+FRI  ENS+EE VR QLN+GI+PD IDVHCLAGL
Sbjct: 61  GNCVPVILLLLQSRLYDQGGLQAEGVFRITGENSEEEFVREQLNKGIIPDGIDVHCLAGL 120

Query: 186 IKAWFRELPQGVLDGLSPEQVLQCNTEEESIELVKQLKPTETALLNWAIDLMADVVEDEE 245
           IKAWFRELP+GVLD L  EQV+QC ++E+ +++V+ L  TE +LLNWAI+LMADV++ E 
Sbjct: 121 IKAWFRELPRGVLDPLPSEQVMQCESDEDFVKVVRLLPQTEASLLNWAINLMADVIQFEH 180

Query: 246 CNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETAT 298
            NKMN+RN+A+VFAPNM+QM+DPLTALM+AVQVM LLK+L  KT+RERE +++
Sbjct: 181 VNKMNSRNLALVFAPNMSQMADPLTALMYAVQVMKLLKSLTEKTVREREASSS 233