Miyakogusa Predicted Gene

Lj5g3v1671380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1671380.1 tr|A9T2K5|A9T2K5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_167707,69.32,5e-19,zf-U1,Zinc finger, U1-C type;
ZF_MATRIN,Zinc finger, C2H2-type matrin; seg,NULL; C2H2 and C2HC zinc
,CUFF.55692.1
         (210 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G03120.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...   123   7e-29

>AT4G03120.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
          protein | chr4:1385747-1387331 FORWARD LENGTH=207
          Length = 207

 Score =  123 bits (309), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 56/58 (96%), Positives = 57/58 (98%)

Query: 1  MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHL 58
          MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR YYQQFEEQQTQSLIDQRIKEHL
Sbjct: 1  MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHL 58