Miyakogusa Predicted Gene

Lj5g3v1670370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1670370.1 tr|B6SR01|B6SR01_MAIZE Heme-binding protein 2
OS=Zea mays PE=2 SV=1,66.2,2e-19,HEME-BINDING PROTEIN-RELATED,NULL;
HEME-BINDING PROTEIN-RELATED,SOUL haem-binding protein; Probable
,CUFF.55688.1
         (95 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17100.1 | Symbols:  | SOUL heme-binding family protein | chr...    60   4e-10
AT1G78450.1 | Symbols:  | SOUL heme-binding family protein | chr...    56   5e-09
AT1G78460.1 | Symbols:  | SOUL heme-binding family protein | chr...    54   1e-08

>AT1G17100.1 | Symbols:  | SOUL heme-binding family protein |
           chr1:5844766-5845539 FORWARD LENGTH=232
          Length = 232

 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 42/70 (60%)

Query: 24  ETPSYTVVHSDSDFEIRLYRSSVWMSAPAVDIISFEKATWNGFHRLFQFTQGANLNFSRI 83
           E PSY +VHS + +EIR Y ++VW+S   +  IS   AT   F +LF + QG N    +I
Sbjct: 46  ECPSYELVHSGNGYEIRRYNNTVWVSTEPIPDISLVDATRTAFFQLFAYIQGKNEYHQKI 105

Query: 84  PMTIPILTTL 93
            MT P+++ +
Sbjct: 106 EMTAPVISQV 115


>AT1G78450.1 | Symbols:  | SOUL heme-binding family protein |
           chr1:29517147-29517910 REVERSE LENGTH=225
          Length = 225

 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 42/70 (60%)

Query: 24  ETPSYTVVHSDSDFEIRLYRSSVWMSAPAVDIISFEKATWNGFHRLFQFTQGANLNFSRI 83
           E PSY VVH+ + +EI  Y ++VW+S   +  IS  +A+ NG+++L  +  G N    RI
Sbjct: 35  ECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRI 94

Query: 84  PMTIPILTTL 93
            + +P +T +
Sbjct: 95  EIALPYITQV 104


>AT1G78460.1 | Symbols:  | SOUL heme-binding family protein |
           chr1:29518547-29519296 REVERSE LENGTH=219
          Length = 219

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 42/67 (62%)

Query: 24  ETPSYTVVHSDSDFEIRLYRSSVWMSAPAVDIISFEKATWNGFHRLFQFTQGANLNFSRI 83
           E P+Y +V +   FEIR+Y +++W+S   +  +S  +AT  GF RL ++ +G N +  ++
Sbjct: 44  ECPTYKLVEAGYGFEIRMYDAALWISTSPIPSLSMTQATKTGFRRLNRYIEGDNKSNVKM 103

Query: 84  PMTIPIL 90
            MT P++
Sbjct: 104 NMTAPVI 110