Miyakogusa Predicted Gene
- Lj5g3v1669330.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1669330.1 Non Chatacterized Hit- tr|I1JFG2|I1JFG2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.12,0,no
description,NULL; Leucine-rich repeat - CC
(cysteine-containin,Leucine-rich repeat, cysteine-cont,CUFF.55687.1
(556 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein... 882 0.0
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 ... 748 0.0
AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 | chr1:436... 645 0.0
AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 | chr3:986... 617 e-177
AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 | chr5:20334... 515 e-146
AT4G24390.1 | Symbols: | RNI-like superfamily protein | chr4:12... 496 e-140
AT4G24390.2 | Symbols: | RNI-like superfamily protein | chr4:12... 496 e-140
AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein | chr... 270 2e-72
AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 | chr1:17276... 72 8e-13
AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein | c... 65 1e-10
AT2G36370.1 | Symbols: | ubiquitin-protein ligases | chr2:15247... 61 2e-09
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-99... 55 2e-07
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei... 54 3e-07
AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein | ch... 53 6e-07
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily pr... 53 6e-07
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1... 50 3e-06
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr... 49 8e-06
>AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein |
chr3:23273479-23276181 REVERSE LENGTH=594
Length = 594
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/579 (74%), Positives = 502/579 (86%), Gaps = 27/579 (4%)
Query: 2 QRVSFSLPEEVLEHV--------------LVCRSWYEIERCCRRNVFVGNCYAVSPEMVV 47
+R++ S PEEVLEHV LVC+SWYEIER CRR VF+GNCYAVSP V+
Sbjct: 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVI 62
Query: 48 KRFPRVRSV-------------IPDGWGGYVSPWIKAMAAACPSLLEIRLKRMVVTDDCL 94
+RFP+VRSV +PDGWGGYV PWI+AM+++ L EIRLKRMVVTDDCL
Sbjct: 63 RRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCL 122
Query: 95 DLIAKSFKNFRVLVLISCEGFTTHGLAAIAANCRNLRELDLRESEVEDICGHWLSHFPDS 154
+LIAKSFKNF+VLVL SCEGF+T GLAAIAA CRNL+ELDLRES+V+D+ GHWLSHFPD+
Sbjct: 123 ELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182
Query: 155 YNSLESLNISCLSNEVNLPALERLVSRCPNLQTLRLNRAVPLDRLTNLLRGAPQLVELGT 214
Y SL SLNISCL++EV+ ALERLV+RCPNL++L+LNRAVPL++L LL+ APQL ELGT
Sbjct: 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGT 242
Query: 215 GAYTAEMRPEVLANLTEAFSGCKQLKGLSGFWDVLPSYLPAVYPVCSGLTSLNLSYATIQ 274
G YTAE+RP+V + L+ A SGCK+L+ LSGFWD +P+YLPAVY VCS LT+LNLSYAT+Q
Sbjct: 243 GGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQ 302
Query: 275 SPDHIKLVSQCGSLQRLWVLDYIEDAGLDVLAASCKDLRELRVFPSDPFGLEPNVALTEE 334
S D +KL+ QC LQRLWVLDYIEDAGL+VLA++CKDLRELRVFPS+PF +EPNVALTE+
Sbjct: 303 SYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQ 362
Query: 335 GLISVSEGCPKLQSVLYFCRQMSNAALNTIAQNRPNMTRFRLCIIEPRTPDYLTHQPLDA 394
GL+SVS GCPKL+SVLYFCRQM+NAAL TIA+NRPNMTRFRLCIIEP+ PDYLT +PLD
Sbjct: 363 GLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422
Query: 395 GFGAIVQHCKNLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDN 454
GFGAIV+HCK+L+RLSLSGLLTD+VFEYIGTYAKK+EMLSVAFAGDSDLG+HHVLSGCD+
Sbjct: 423 GFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDS 482
Query: 455 LRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERG 514
LRKLEIRDCPFGDKALLANA+KLETMRSLWMSSC VS+GACKLLGQKMP+LNVEVIDERG
Sbjct: 483 LRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542
Query: 515 PPDTRPESSPVEKLYIYRTISGPRVDMPGYVWTMEDDSA 553
PD+RPES PVE+++IYRT++GPR DMPG+VW M+ DS
Sbjct: 543 APDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQDST 581
>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 |
chr4:1405108-1407057 REVERSE LENGTH=585
Length = 585
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/571 (63%), Positives = 449/571 (78%), Gaps = 28/571 (4%)
Query: 8 LPEEVLEHVL--------------VCRSWYEIERCCRRNVFVGNCYAVSPEMVVKRFPRV 53
P +VLEH+L VC+SW+E ER R+ VFVGNCYAVSP V +RFP +
Sbjct: 5 FPPKVLEHILSFIDSNEDRNSVSLVCKSWFETERKTRKRVFVGNCYAVSPAAVTRRFPEM 64
Query: 54 RSV-------------IPDGWGGYVSPWIKAMAAACPSLLEIRLKRMVVTDDCLDLIAKS 100
RS+ +PDGWGGY PWI+AMAA SL EIR+KRMVVTD+CL+ IA S
Sbjct: 65 RSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAAKSSSLEEIRMKRMVVTDECLEKIAAS 124
Query: 101 FKNFRVLVLISCEGFTTHGLAAIAANCRNLRELDLRESEVEDICGHWLSHFPDSYNSLES 160
FK+F+VLVL SCEGF+T G+AAIAA CRNLR L+LRE VED+ G WLS+FP+S SL S
Sbjct: 125 FKDFKVLVLTSCEGFSTDGIAAIAATCRNLRVLELRECIVEDLGGDWLSYFPESSTSLVS 184
Query: 161 LNISCLSNEVNLPALERLVSRCPNLQTLRLNRAVPLDRLTNLLRGAPQLVELGTGAYTAE 220
L+ SCL +EV + LERLVSR PNL++L+LN AV LD L +LLR APQL ELGTG++ A+
Sbjct: 185 LDFSCLDSEVKISDLERLVSRSPNLKSLKLNPAVTLDGLVSLLRCAPQLTELGTGSFAAQ 244
Query: 221 MRPEVLANLTEAFSGCKQLKGLSGFWDVLPSYLPAVYPVCSGLTSLNLSYATIQSPDHIK 280
++PE + L+EAFS CKQL+ LSG WDVLP YLPA+Y VC GLTSLNLSYAT++ PD ++
Sbjct: 245 LKPEAFSKLSEAFSNCKQLQSLSGLWDVLPEYLPALYSVCPGLTSLNLSYATVRMPDLVE 304
Query: 281 LVSQCGSLQRLWVLDYIEDAGLDVLAASCKDLRELRVFPSDPFGLEPNVALTEEGLISVS 340
L+ +C LQ+LWV+D IED GL+ +A+ CK+LRELRVFPS+P N+ LTE+GL+ VS
Sbjct: 305 LLRRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRVFPSEPDLDATNIPLTEQGLVFVS 364
Query: 341 EGCPKLQSVLYFCRQMSNAALNTIAQNRPNMTRFRLCIIEPRTPDYLTHQPLDAGFGAIV 400
+GC KL+SVLYFC Q +NAAL TIA+ RPN+ FRLC+IEP PDY T++PLD GF AI
Sbjct: 365 KGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAIA 424
Query: 401 QHCKNLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEI 460
+ C++L+RLS+SGLL+D+ F+YIG +AKK+ MLS+AFAGDSDL LHH+LSGC++L+KLEI
Sbjct: 425 EGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLKKLEI 484
Query: 461 RDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERGPPDTRP 520
RDCPFGD ALL +AAKLETMRSLWMSSC VS+GACKLL QKMPRLNVEVIDE PP++RP
Sbjct: 485 RDCPFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVIDEH-PPESRP 543
Query: 521 ESSPVEKLYIYRTISGPRVDMPGYVWTMEDD 551
ESSPVE++YIYRT++GPR+D P +VWT+ +
Sbjct: 544 ESSPVERIYIYRTVAGPRMDTPEFVWTIHKN 574
>AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 |
chr1:4368879-4370780 REVERSE LENGTH=577
Length = 577
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/571 (56%), Positives = 411/571 (71%), Gaps = 33/571 (5%)
Query: 8 LPEEVLEHV--------------LVCRSWYEIERCCRRNVFVGNCYAVSPEMVVKRFPRV 53
P+EV+EHV LVC+SW++IER R+ VF+GNCYA++PE +++RFP +
Sbjct: 4 FPDEVIEHVFDFVASHKDRNSISLVCKSWHKIERFSRKEVFIGNCYAINPERLIRRFPCL 63
Query: 54 RSV-------------IPDGWGGYVSPWIKAMAAACPSLLEIRLKRMVVTDDCLDLIAKS 100
+S+ +P WGG+V PWI+A+A + L E+RLKRMVVTD+ LDL+++S
Sbjct: 64 KSLTLKGKPHFADFNLVPHEWGGFVHPWIEALARSRVGLEELRLKRMVVTDESLDLLSRS 123
Query: 101 FKNFRVLVLISCEGFTTHGLAAIAANCRNLRELDLRESEVEDICGHWLSHFPDSYNSLES 160
F NF+ LVL+SCEGFTT GLA+IAANCR+LRELDL+E+E++D G WL+ FPDS +L S
Sbjct: 124 FANFKSLVLVSCEGFTTDGLASIAANCRHLRELDLQENEIDDHRGQWLNCFPDSCTTLMS 183
Query: 161 LNISCLSNEVNLPALERLVSRCPNLQTLRLNRAVPLDRLTNLLRGAPQLVELGTGAYTAE 220
LN +CL E N+ ALERLV+R PNL++L+LNRAVPLD L L+ APQLV+LG G+Y E
Sbjct: 184 LNFACLKGETNVAALERLVARSPNLKSLKLNRAVPLDALARLMSCAPQLVDLGVGSYENE 243
Query: 221 MRPEVLANLTEAFSGCKQLKGLSGFWDVLPSYLPAVYPVCSGLTSLNLSYAT-IQSPDHI 279
PE A L A L+ LSGF +V P LPA YP+C L SLNLSYA IQ I
Sbjct: 244 PDPESFAKLMTAIKKYTSLRSLSGFLEVAPLCLPAFYPICQNLISLNLSYAAEIQGNHLI 303
Query: 280 KLVSQCGSLQRLWVLDYIEDAGLDVLAASCKDLRELRVFPSDPFGLEPNVA-LTEEGLIS 338
KL+ C LQRLW+LD I D GL V+AA+CK+L+ELRVFPSD G E N A +TE GL++
Sbjct: 304 KLIQLCKRLQRLWILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNASVTEVGLVA 363
Query: 339 VSEGCPKLQSVLYFCRQMSNAALNTIAQNRPNMTRFRLCIIEPRTPDYLTHQPLDAGFGA 398
+S GCPKL S+LYFC+QM+NAAL +A+N PN RFRLCI+EP PD++T Q LD GFGA
Sbjct: 364 ISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGA 423
Query: 399 IVQHCKNLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKL 458
IVQ CK L+RLS+SGLLTD+VF YIG YA++LEMLS+AFAGD+D G+ +VL+GC +RKL
Sbjct: 424 IVQACKGLRRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMRKL 483
Query: 459 EIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERG---- 514
EIRD PFG+ ALLA+ + ETMRSLWMSSC V+ G CK L Q PRLNVE+I+E
Sbjct: 484 EIRDSPFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENENNGM 543
Query: 515 PPDTRPESSPVEKLYIYRTISGPRVDMPGYV 545
+ E V+KLY+YRT+ G R D P YV
Sbjct: 544 EQNEEDEREKVDKLYLYRTVVGTRKDAPPYV 574
>AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 |
chr3:9868342-9870464 FORWARD LENGTH=575
Length = 575
Score = 617 bits (1592), Expect = e-177, Method: Compositional matrix adjust.
Identities = 317/573 (55%), Positives = 413/573 (72%), Gaps = 33/573 (5%)
Query: 8 LPEEVLEHV--------------LVCRSWYEIERCCRRNVFVGNCYAVSPEMVVKRFPRV 53
P+EV+EHV LVC+SWY+IER R+ VF+GNCYA++PE +++RFP +
Sbjct: 4 FPDEVIEHVFDFVTSHKDRNAISLVCKSWYKIERYSRQKVFIGNCYAINPERLLRRFPCL 63
Query: 54 RSV-------------IPDGWGGYVSPWIKAMAAACPSLLEIRLKRMVVTDDCLDLIAKS 100
+S+ +P WGG+V PWI+A+A + L E+RLKRMVVTD+ L+L+++S
Sbjct: 64 KSLTLKGKPHFADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLELLSRS 123
Query: 101 FKNFRVLVLISCEGFTTHGLAAIAANCRNLRELDLRESEVEDICGHWLSHFPDSYNSLES 160
F NF+ LVL+SCEGFTT GLA+IAANCR+LR+LDL+E+E++D G WLS FPD+ +L +
Sbjct: 124 FVNFKSLVLVSCEGFTTDGLASIAANCRHLRDLDLQENEIDDHRGQWLSCFPDTCTTLVT 183
Query: 161 LNISCLSNEVNLPALERLVSRCPNLQTLRLNRAVPLDRLTNLLRGAPQLVELGTGAYTAE 220
LN +CL E NL ALERLV+R PNL++L+LNRAVPLD L L+ APQ+V+LG G+Y +
Sbjct: 184 LNFACLEGETNLVALERLVARSPNLKSLKLNRAVPLDALARLMACAPQIVDLGVGSYEND 243
Query: 221 MRPEVLANLTEAFSGCKQLKGLSGFWDVLPSYLPAVYPVCSGLTSLNLSYAT-IQSPDHI 279
E L C L+ LSGF + P L A +P+C LTSLNLSYA I I
Sbjct: 244 PDSESYLKLMAVIKKCTSLRSLSGFLEAAPHCLSAFHPICHNLTSLNLSYAAEIHGSHLI 303
Query: 280 KLVSQCGSLQRLWVLDYIEDAGLDVLAASCKDLRELRVFPSDPFGLEPNVALTEEGLISV 339
KL+ C LQRLW+LD I D GL+V+A++CK+L+ELRVFPSD G N A+TEEGL+++
Sbjct: 304 KLIQHCKKLQRLWILDSIGDKGLEVVASTCKELQELRVFPSDLLG-GGNTAVTEEGLVAI 362
Query: 340 SEGCPKLQSVLYFCRQMSNAALNTIAQNRPNMTRFRLCIIEPRTPDYLTHQPLDAGFGAI 399
S GCPKL S+LYFC+QM+NAAL T+A+N PN RFRLCI+EP PD++T QPLD GFGAI
Sbjct: 363 SAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAI 422
Query: 400 VQHCKNLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLE 459
V+ CK+L+RLSLSGLLTD+VF YIG YA +LEMLS+AFAGD+D G+ +VL+GC ++KLE
Sbjct: 423 VKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKKLE 482
Query: 460 IRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDE----RGP 515
IRD PFGD ALLA+ +K ETMRSLWMSSC V+ CK L +K P LNVE+I+E R
Sbjct: 483 IRDSPFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDNNRME 542
Query: 516 PDTRPESSPVEKLYIYRTISGPRVDMPGYVWTM 548
+ V+KLY+YRT+ G R+D P +VW +
Sbjct: 543 ENGHEGRQKVDKLYLYRTVVGTRMDAPPFVWIL 575
>AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 |
chr5:20334420-20336531 REVERSE LENGTH=619
Length = 619
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/575 (48%), Positives = 364/575 (63%), Gaps = 39/575 (6%)
Query: 5 SFSLPEEVLEHVL------------------VCRSWYEIERCCRRNVFVGNCYAVSPEMV 46
S + P+ VLE+VL VC+SW+ +E R VF+GNCYA+SP +
Sbjct: 47 SQTFPDHVLENVLENVLQFLDSRCDRNAASLVCKSWWRVEALTRSEVFIGNCYALSPARL 106
Query: 47 VKRFPRVRSVI-------------PDGWGGYVSPWIKAMAAACPSLLEIRLKRMVVTDDC 93
+RF RVRS++ P WG +PW+ MA A P L ++ LKRM VTDD
Sbjct: 107 TQRFKRVRSLVLKGKPRFADFNLMPPDWGANFAPWVSTMAQAYPCLEKVDLKRMFVTDDD 166
Query: 94 LDLIAKSFKNFRVLVLISCEGFTTHGLAAIAANCRNLRELDLRESEVEDICGHWLSHFPD 153
L L+A SF F+ L+L+ CEGF T G++ +A CR L+ LDL ESEV D W+S FP+
Sbjct: 167 LALLADSFPGFKELILVCCEGFGTSGISIVANKCRKLKVLDLIESEVTDDEVDWISCFPE 226
Query: 154 SYNSLESLNISCLSNEVNLPALERLVSRCPNLQTLRLNRAVPLDRLTNLLRGAPQLVELG 213
LESL C+ +N ALE LV+R P L+ LRLNR V L L LL GAPQL LG
Sbjct: 227 DVTCLESLAFDCVEAPINFKALEGLVARSPFLKKLRLNRFVSLVELHRLLLGAPQLTSLG 286
Query: 214 TGAYTAEMRP--EVLANLTEAFSGCKQLKGLSGFWDVLPSYLPAVYPVCSGLTSLNLSYA 271
TG+++ + P E + AF CK + LSGF +++P YLPA++PVC+ LTSLN SYA
Sbjct: 287 TGSFSHDEEPQSEQEPDYAAAFRACKSVVCLSGFRELMPEYLPAIFPVCANLTSLNFSYA 346
Query: 272 TIQSPDHIK-LVSQCGSLQRLWVLDYIEDAGLDVLAASCKDLRELRVFPSDPFGLEPNVA 330
I SPD K ++ C LQ W LD I D GL +AA+CK+LRELR+FP DP +
Sbjct: 347 NI-SPDMFKPIILNCHKLQVFWALDSICDEGLQAVAATCKELRELRIFPFDPRE-DSEGP 404
Query: 331 LTEEGLISVSEGCPKLQSVLYFCRQMSNAALNTIAQNRPNMTRFRLCIIEPRTPDYLTHQ 390
++E GL ++SEGC KL+S+LYFC++M+NAA+ +++N P +T FRLCI+ PD++T +
Sbjct: 405 VSELGLQAISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGK 464
Query: 391 PLDAGFGAIVQHCKNLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLS 450
P+D GFGAIV++CK L RL++SGLLTD+ F Y+G Y K + LSVAFAGDSD+ L HVL
Sbjct: 465 PMDEGFGAIVKNCKKLTRLAVSGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLE 524
Query: 451 GCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVI 510
GC L+KLEIRD PFGD AL + + MR +WMS+C +S G CK + + MP L VEVI
Sbjct: 525 GCPRLQKLEIRDSPFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVI 584
Query: 511 DERGPPDTRPESSPVEKLYIYRTISGPRVDMPGYV 545
G D VE LY+YR++ GPR D P +V
Sbjct: 585 ---GSDDDDDNRDYVETLYMYRSLDGPRNDAPKFV 616
>AT4G24390.1 | Symbols: | RNI-like superfamily protein |
chr4:12613909-12615966 REVERSE LENGTH=623
Length = 623
Score = 496 bits (1277), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/546 (47%), Positives = 346/546 (63%), Gaps = 19/546 (3%)
Query: 17 LVCRSWYEIERCCRRNVFVGNCYAVSPEMVVKRFPRVRSVI-------------PDGWGG 63
LVCRSWY +E R VF+GNCY++SP ++ RF RVRS++ P WG
Sbjct: 77 LVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFKRVRSLVLKGKPRFADFNLMPPNWGA 136
Query: 64 YVSPWIKAMAAACPSLLEIRLKRMVVTDDCLDLIAKSFKNFRVLVLISCEGFTTHGLAAI 123
SPW+ A A A P L ++ LKRM VTDD L L+A+SF F+ L L+ CEGF T G+A +
Sbjct: 137 QFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLAESFPGFKELTLVCCEGFGTSGIAIV 196
Query: 124 AANCRNLRELDLRESEVEDICGHWLSHFPDSYNSLESLNISCLSNEVNLPALERLVSRCP 183
A CR L+ LDL ESEV D W+S FP+ LESL+ C+ + +N ALE LV R P
Sbjct: 197 ANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLSFDCVESPINFKALEELVVRSP 256
Query: 184 NLQTLRLNRAVPLDRLTNLLRGAPQLVELGTGAYTAEMRP--EVLANLTEAFSGCKQLKG 241
L+ LR NR V L+ L L+ APQL LGTG+++ + P E + AF CK +
Sbjct: 257 FLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDNVPQGEQQPDYAAAFRACKSIVC 316
Query: 242 LSGFWDVLPSYLPAVYPVCSGLTSLNLSYATIQSPDHIK-LVSQCGSLQRLWVLDYIEDA 300
LSGF + P YL A+ VC+ LTSLN SYA I SP +K ++S C +++ W LD I D
Sbjct: 317 LSGFREFRPEYLLAISSVCANLTSLNFSYANI-SPHMLKPIISNCHNIRVFWALDSIRDE 375
Query: 301 GLDVLAASCKDLRELRVFPSDPFGLEPNVALTEEGLISVSEGCPKLQSVLYFCRQMSNAA 360
GL +AA+CK+LRELR+FP DP + ++ GL ++SEGC KL+S+LYFC+ M+N A
Sbjct: 376 GLQAVAATCKELRELRIFPFDPRE-DSEGPVSGVGLQAISEGCRKLESILYFCQNMTNGA 434
Query: 361 LNTIAQNRPNMTRFRLCIIEPRTPDYLTHQPLDAGFGAIVQHCKNLQRLSLSGLLTDRVF 420
+ +++N P +T FRLCI+ PD++T +P+D GFGAIV++CK L RL++SGLLTD F
Sbjct: 435 VTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSGLLTDEAF 494
Query: 421 EYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETM 480
YIG Y K + LSVAFAG+SD L +VL GC L+KLEIRD PFGD L + + M
Sbjct: 495 SYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRDSPFGDVGLRSGMHRYSNM 554
Query: 481 RSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERGPPDTRPESSP-VEKLYIYRTISGPRV 539
R +W+SSCL+S G C+ + +P + VEV G D + VE LY+YR++ GPR
Sbjct: 555 RFVWLSSCLISRGGCRGVSHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYRSLDGPRK 614
Query: 540 DMPGYV 545
D P +V
Sbjct: 615 DAPKFV 620
>AT4G24390.2 | Symbols: | RNI-like superfamily protein |
chr4:12613909-12615966 REVERSE LENGTH=623
Length = 623
Score = 496 bits (1277), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/546 (47%), Positives = 346/546 (63%), Gaps = 19/546 (3%)
Query: 17 LVCRSWYEIERCCRRNVFVGNCYAVSPEMVVKRFPRVRSVI-------------PDGWGG 63
LVCRSWY +E R VF+GNCY++SP ++ RF RVRS++ P WG
Sbjct: 77 LVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFKRVRSLVLKGKPRFADFNLMPPNWGA 136
Query: 64 YVSPWIKAMAAACPSLLEIRLKRMVVTDDCLDLIAKSFKNFRVLVLISCEGFTTHGLAAI 123
SPW+ A A A P L ++ LKRM VTDD L L+A+SF F+ L L+ CEGF T G+A +
Sbjct: 137 QFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLAESFPGFKELTLVCCEGFGTSGIAIV 196
Query: 124 AANCRNLRELDLRESEVEDICGHWLSHFPDSYNSLESLNISCLSNEVNLPALERLVSRCP 183
A CR L+ LDL ESEV D W+S FP+ LESL+ C+ + +N ALE LV R P
Sbjct: 197 ANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLSFDCVESPINFKALEELVVRSP 256
Query: 184 NLQTLRLNRAVPLDRLTNLLRGAPQLVELGTGAYTAEMRP--EVLANLTEAFSGCKQLKG 241
L+ LR NR V L+ L L+ APQL LGTG+++ + P E + AF CK +
Sbjct: 257 FLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDNVPQGEQQPDYAAAFRACKSIVC 316
Query: 242 LSGFWDVLPSYLPAVYPVCSGLTSLNLSYATIQSPDHIK-LVSQCGSLQRLWVLDYIEDA 300
LSGF + P YL A+ VC+ LTSLN SYA I SP +K ++S C +++ W LD I D
Sbjct: 317 LSGFREFRPEYLLAISSVCANLTSLNFSYANI-SPHMLKPIISNCHNIRVFWALDSIRDE 375
Query: 301 GLDVLAASCKDLRELRVFPSDPFGLEPNVALTEEGLISVSEGCPKLQSVLYFCRQMSNAA 360
GL +AA+CK+LRELR+FP DP + ++ GL ++SEGC KL+S+LYFC+ M+N A
Sbjct: 376 GLQAVAATCKELRELRIFPFDPRE-DSEGPVSGVGLQAISEGCRKLESILYFCQNMTNGA 434
Query: 361 LNTIAQNRPNMTRFRLCIIEPRTPDYLTHQPLDAGFGAIVQHCKNLQRLSLSGLLTDRVF 420
+ +++N P +T FRLCI+ PD++T +P+D GFGAIV++CK L RL++SGLLTD F
Sbjct: 435 VTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSGLLTDEAF 494
Query: 421 EYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETM 480
YIG Y K + LSVAFAG+SD L +VL GC L+KLEIRD PFGD L + + M
Sbjct: 495 SYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRDSPFGDVGLRSGMHRYSNM 554
Query: 481 RSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERGPPDTRPESSP-VEKLYIYRTISGPRV 539
R +W+SSCL+S G C+ + +P + VEV G D + VE LY+YR++ GPR
Sbjct: 555 RFVWLSSCLISRGGCRGVSHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYRSLDGPRK 614
Query: 540 DMPGYV 545
D P +V
Sbjct: 615 DAPKFV 620
>AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein |
chr2:16672848-16675486 REVERSE LENGTH=592
Length = 592
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/560 (30%), Positives = 286/560 (51%), Gaps = 34/560 (6%)
Query: 17 LVCRSWYEIERCCRRNVFVGNCYAVSPEMVVKRFPRVRSV-------------IPDGWGG 63
LVCR W++I+ R +V + CY +P+ + +RFP +RS+ IP+ WGG
Sbjct: 39 LVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGG 98
Query: 64 YVSPWIKAMAAACPSLLEIRLKRMVVTDDCLDLIAKS-FKNFRVLVLISCEGFTTHGLAA 122
YV+PW+ ++ L + +RM+V+D LD +AK+ + L L C GFTT GL +
Sbjct: 99 YVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLS 158
Query: 123 IAANCRNLRELDLRESEVEDICGHWLSHFPDSYNSLESLNISCLS-NEVNLPALERLVSR 181
I +CR ++ L + ES + G WL SLE LN +++ LE +
Sbjct: 159 IVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218
Query: 182 CPNLQTLRLNRAVPLDRLTNLLRGAPQLVELGTGAYTAEM-RPEVLANLTEAFSGCKQLK 240
C +L ++++ L+ L + A L E G+ ++ PE NL C+
Sbjct: 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRL-- 275
Query: 241 GLSGFWDVLPSYLPAVYPVCSGLTSLNLSYATIQSPDHIKLVSQCGSLQRLWVLDYIEDA 300
GLS P+ +P ++P + + L+L YA +++ DH L+ +C +L+ L + I D
Sbjct: 276 GLSYMG---PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDR 332
Query: 301 GLDVLAASCKDLRELRV-FPSDPFGLEPNVAL-TEEGLISVSEGCPKLQSVLYFCRQMSN 358
GL+VLA CK L+ LR+ +D G+E L ++ GLI++++GC +L+ + + ++N
Sbjct: 333 GLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITN 392
Query: 359 AALNTIAQNRPNMTRFRLCIIEPRTPDYLTHQPLDAGFGAIVQHCKNLQRLSL---SGLL 415
+L +I N+ FRL +++ + +T PLD G +++ CK L+R + G L
Sbjct: 393 ESLESIGTYLKNLCDFRLVLLD--REERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGL 450
Query: 416 TDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAA 475
TD YIG Y+ + + + + G+SD GL GC NL+KLE+R C F ++A+ A
Sbjct: 451 TDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVT 510
Query: 476 KLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDERGPPDTRPESSPVE-----KLYI 530
KL ++R LW+ S L+ P N+E+I R P+ + E +
Sbjct: 511 KLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILA 570
Query: 531 YRTISGPRVDMPGYVWTMED 550
Y +++G R D P V +++
Sbjct: 571 YYSLAGQRTDCPTTVRVLKE 590
>AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 |
chr1:17276103-17277659 REVERSE LENGTH=518
Length = 518
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 79/381 (20%)
Query: 118 HGLAAIAANCRNLRELDLRE-SEVEDICGHWLSHFPDSYNSLESLNISCLSNEVNLPALE 176
L I+ CRNL+ L LR E+ D+ ++ F ++ L+ SC S + ++
Sbjct: 120 EALVKISLRCRNLKRLKLRACRELTDV---GMAAFAENCKDLKIF--SCGSCDFGAKGVK 174
Query: 177 RLVSRCPNLQTLRLNRAVPLDRLTNLLRGAPQLVELGTGAYTAEMRPEVLANLTEA---- 232
++ C NL+ L + R L T++ AP+++ G G + ++ L L
Sbjct: 175 AVLDHCSNLEELSIKR---LRGFTDI---APEMI--GPGVAASSLKSICLKELYNGQCFG 226
Query: 233 --FSGCKQLKGL-----SGFWDVLPSYLPAVYPVCSGLTSLNLSYATIQSPDHIKLVSQC 285
G K LK L SG WD+L L + G+ ++L + S + +S C
Sbjct: 227 PVIVGAKNLKSLKLFRCSGDWDLL---LQEMSGKDHGVVEIHLERMQV-SDVALSAISYC 282
Query: 286 GSLQRLWVLDYIE--DAGLDVLAASCKDLRELRVFPSDPFGLEPNVALTEEGLISVSEGC 343
SL+ L ++ E + GL +A CK LR+L + G + N+ + +EGL++V++ C
Sbjct: 283 SSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHID-----GWKANL-IGDEGLVAVAKFC 336
Query: 344 PKLQSVLYFCRQMSNAALNTIAQNRPNMTRFRLCIIEPRTPDYLTHQPLDAGFGAIVQHC 403
+LQ ++ + P G + C
Sbjct: 337 SQLQELVL-----------------------------------IGVNPTTLSLGMLAAKC 361
Query: 404 KNLQRLSLSGLLT--DRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIR 461
NL+RL+L G T D I L L + SD+G+ ++ +GC L K++I+
Sbjct: 362 LNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNCPISDVGIENLANGCPGLTKVKIK 421
Query: 462 DCPFGDKALLANAAK-LETMR 481
C K +L A L T+R
Sbjct: 422 KC----KGVLGGCADWLRTVR 438
>AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8845927-8848701 FORWARD LENGTH=610
Length = 610
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 113/532 (21%), Positives = 203/532 (38%), Gaps = 123/532 (23%)
Query: 3 RVSFSLPEEVLEHV--------------LVCRSWYEIERCCRRNVFVGNCYAVSPE---- 44
R++ LPEE++ + LVC+ W +ER R + +G + SP+
Sbjct: 6 RINNCLPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASF--SPDDFIS 63
Query: 45 MVVKRFPRVRSVIPD--------------------GWGGYVSPWIKAMAAACPSLLEIRL 84
++ +RF + S+ D S K + S E +
Sbjct: 64 LLSRRFLYITSIHVDERISVSLPSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAE-NV 122
Query: 85 KRMVVTDDCLDLIAKSFKNFRVLVLISCEGFTTHGLAAIAANCRNLRELDLRESEVEDIC 144
+ +TD L +A F L LI C ++ GL ++A C +L+ LDL+ V D
Sbjct: 123 ESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVGD-- 180
Query: 145 GHWLSHFPDSYNSLESLNISCLSNEVNLPALERLVSRCPNLQTLRLNRAVPLDRLTNLLR 204
L+ LE LN+ ++ ++ +V +L+++ + + + L+
Sbjct: 181 -QGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLS---- 235
Query: 205 GAPQLVELGTGAYTAEMRPEVLANLTEAFSGCKQLKGLSGFWD---VLPSYLPAVYPVCS 261
L S CK L+ L + D + L AV C
Sbjct: 236 ------------------------LEAVGSHCKLLEVL--YLDSEYIHDKGLIAVAQGCH 269
Query: 262 GLTSLNLSYATIQSPDHIKLVSQCGSLQRL--WVLDYIEDAGLDVLAASCKDLRELRVFP 319
L +L L ++ + C SL+RL + + D G+ + K L++L +
Sbjct: 270 RLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTL-- 327
Query: 320 SDPFGLEPNVALTEEGLISVSEGCPKLQSV-LYFCRQMSNAALNTIAQNRPNMTRFRLCI 378
SD + ++ +GL +++ GC +L+ V + C + + I ++ P + L
Sbjct: 328 SDCY------FVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELAL-- 379
Query: 379 IEPRTPDYLTHQPLDAGFGAIVQHCKNLQRLSLSGLLTDRVFEYIGTYAKKLEMLS-VAF 437
+C QR+ S L + IG K LE+L V
Sbjct: 380 ----------------------LYC---QRIGNSAL------QEIGKGCKSLEILHLVDC 408
Query: 438 AGDSDLGLHHVLSGCDNLRKLEIRDC-PFGDKALLANAAKLETMRSLWMSSC 488
+G D+ + + GC NL+KL IR C G+K +++ +++ L + C
Sbjct: 409 SGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFC 460
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 184/456 (40%), Gaps = 71/456 (15%)
Query: 50 FPRVRSVIPDGWGGYVSPWIKAMAAACPSLLEIRLKRMVVTDDCLDLIAKSFKNFRVLVL 109
FPR+ ++ S + ++A C SL + L+ V D L + K K L L
Sbjct: 139 FPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVGDQGLAAVGKFCKQLEELNL 198
Query: 110 ISCEGFTTHG---------------------------LAAIAANCRNLRELDLRESEVED 142
CEG T G L A+ ++C+ L L L + D
Sbjct: 199 RFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYLDSEYIHD 258
Query: 143 ICGHWLSHFPDSYNSLESLNISCLS-NEVNLPALERLVSRCPNLQTLRLN--RAVPLDRL 199
L + L++L + C+S +V A+ L C +L+ L L + +
Sbjct: 259 ---KGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGEL---CTSLERLALYSFQHFTDKGM 312
Query: 200 TNLLRGAPQLVELG-TGAYTAEMRP-EVLANLTEAFSGCKQLK--GLSGFWDVLPSYLPA 255
+ +G+ +L +L + Y + E +A+ GCK+L+ ++G ++ + A
Sbjct: 313 RAIGKGSKKLKDLTLSDCYFVSCKGLEAIAH------GCKELERVEINGCHNIGTRGIEA 366
Query: 256 VYPVCSGLTSLNLSYATIQSPDHIKLVSQ-CGSLQRLWVLDY--IEDAGLDVLAASCKDL 312
+ C L L L Y ++ + + C SL+ L ++D I D + +A C++L
Sbjct: 367 IGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNL 426
Query: 313 RELRVFPSDPFGLEPNVALTEEGLISVSEGCPKLQSV-LYFCRQMSNAALNTIAQNRPNM 371
++L + G +G+IS+ + C L + L FC ++ N AL I +
Sbjct: 427 KKLHIRRCYEIG--------NKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKG---- 474
Query: 372 TRFRLCIIEPRTPDYLTHQPLDAGFGAIVQHCKNLQRLSLSGL--LTDRVFEYIGTYAKK 429
C ++ +Q DAG AI + C L L +S L + D +G
Sbjct: 475 -----CSLQQLNVSG-CNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPM 528
Query: 430 LEMLSVAFAGD-SDLGLHHVLSGCDNLRKLEIRDCP 464
L+ L ++ +D GL+H++ C L + CP
Sbjct: 529 LKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCP 564
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 116/277 (41%), Gaps = 27/277 (9%)
Query: 31 RNVFVGNCYAVSP---EMVVKRFPRVRSVIPDGWGGYVSPWIKAMAAACPSLLEIRLKR- 86
+++ + +CY VS E + + V +G + I+A+ +CP L E+ L
Sbjct: 323 KDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYC 382
Query: 87 MVVTDDCLDLIAKSFKNFRVLVLISCEGFTTHGLAAIAANCRNLRELDLRESEVEDICGH 146
+ + L I K K+ +L L+ C G + +IA CRNL++L +R +I
Sbjct: 383 QRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIR--RCYEIGNK 440
Query: 147 WLSHFPDSYNSLESLNISCLSNEVNLPALERLVSRCPNLQTLRLN--RAVPLDRLTNLLR 204
+ SL L++ ++V AL + C +LQ L ++ + +T + R
Sbjct: 441 GIISIGKHCKSLTELSLR-FCDKVGNKALIAIGKGC-SLQQLNVSGCNQISDAGITAIAR 498
Query: 205 GAPQLVELGTGAYTAEMRPEVLAN-----LTEAFSGCKQLKG--LSGFWDVLPSYLPAVY 257
G PQL L VL N L E GC LK LS + + L +
Sbjct: 499 GCPQLTHLDI---------SVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLV 549
Query: 258 PVCSGLTSLNLSYA-TIQSPDHIKLVSQCGSLQRLWV 293
C L + ++ Y I S +VS C ++++ +
Sbjct: 550 QKCKLLETCHMVYCPGITSAGVATVVSSCPHIKKVLI 586
>AT2G36370.1 | Symbols: | ubiquitin-protein ligases |
chr2:15247894-15252800 FORWARD LENGTH=898
Length = 898
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 130/296 (43%), Gaps = 42/296 (14%)
Query: 89 VTDDCLDLIAKSFKNFRVLVLISCEGFTTHGLAAIAANCRNLRELDLRESEVEDICGHWL 148
+T++ +D I N + L + CEG + L + + + ++ L LR+++V D L
Sbjct: 492 MTNEHMD-INSVASNLQTLHMSKCEGISETSLLNLITHSQKMKSLCLRDTKVSD---SVL 547
Query: 149 SHFPDSYNSLESLNISCLSNEVNLPALERLVSRCPNLQTLRLNRAVPLDRLTNLLRGAPQ 208
FP S +LE+L+IS + ++ AL R++SR PNL+TL+ RG
Sbjct: 548 CEFPGS--TLEALDIS--NTTISWMALARVISRNPNLKTLK-------------ARGCKN 590
Query: 209 LVELGTGAYTAEMRPEVLANLTEAFSGCKQLKGLSGF---WDVLPSYLPAVYPVCSGLTS 265
L++L T P L + E F + GL W ++ P S L
Sbjct: 591 LLQLEVDGRTDNFSP--LVSGQEVFKCLSKGSGLEELEIGWGFSYFSFESLRPAASFLRV 648
Query: 266 LNLSYATIQSPDHIKLV-SQCGSLQRLWVLDY--IEDAGLDVLAASCKDLRELRVFPSDP 322
+++ D +KL+ S C L+ + VL + I D+ L + S K L+EL + S
Sbjct: 649 ISVGLGASLGEDVLKLLPSTCPLLESI-VLHFQEISDSALTSVLTSLKHLQELAL--SYC 705
Query: 323 FGLEPNVALTEEGLISVSEGCPKLQSVLY--FCRQMSNAALNTIAQNRPNMTRFRL 376
FG E L S P L+ + R M+N L + Q+ PN+T L
Sbjct: 706 FG--------EISLQSFKFSMPNLRKLRLERVTRWMTNDDLLVLTQSCPNLTELSL 753
>AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE LENGTH=642
Length = 642
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 190/464 (40%), Gaps = 79/464 (17%)
Query: 100 SFKNFRVLVLISCEGFTTHGLAAIAANCRNLRELDLRES-EVED--------ICG----- 145
S R L + C + GLA I C NL ++ L+ E+ D IC
Sbjct: 144 SATGLRELKMDKCLSLSDVGLARIVVGCSNLNKISLKWCMEISDLGIDLLCKICKGLKSL 203
Query: 146 --HWLSHFPDSYNSLESLNISCLSNEVNLP-----ALERLVSRCPNLQTLRLNRA--VPL 196
+L DS S+ L + + V+ P L+ L + P+LQ + + R V L
Sbjct: 204 DVSYLKITNDSIRSIALLVKLEVLDMVSCPLIDDGGLQFLENGSPSLQEVDVTRCDRVSL 263
Query: 197 DRLTNLLRGAPQLVELGTGAYTAEMRPEVLANLTEAFSGCKQLKGLSGFW----DVLPSY 252
L +++RG P + L +E+ L + K LK L W V S
Sbjct: 264 SGLISIVRGHPDIQLLKASHCVSEVSGSFLKYI-------KGLKHLKTIWIDGAHVSDSS 316
Query: 253 LPAVYPVCSGLTSLNLSYAT-IQSPDHIKLVSQCGSLQ--RLWVLDYIEDAGLDVLAASC 309
L ++ C L + LS + I L C +L+ L ++ D + +A SC
Sbjct: 317 LVSLSSSCRSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSC 376
Query: 310 KDLRELRVFPSDPFGLEPNVALTEEGLISVSEGCPKL---QSVLYFCRQMSNAALNTIAQ 366
++L L+ LE +TE+GL S+ GC + + L C +++ L I++
Sbjct: 377 RNLGTLK--------LESCHLITEKGLQSL--GCYSMLVQELDLTDCYGVNDRGLEYISK 426
Query: 367 NRPNMTRFRLCIIEPRTPDYLTH--------QPLD----AGFG-----AIVQHCKNLQRL 409
N+ R +L + + + H LD AGFG A+ + CK+L RL
Sbjct: 427 C-SNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCKSLNRL 485
Query: 410 SLSGL--LTDRVFEYIGTYAKKLEMLS----VAFAGDSDLGLHHVLSGCDNLRKLEIRDC 463
LS LTD E I ++LE+LS + +GL + SGC L L+++ C
Sbjct: 486 ILSYCCELTDTGVEQI----RQLELLSHLELRGLKNITGVGLAAIASGCKKLGYLDVKLC 541
Query: 464 P-FGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLN 506
D A A + +R + + +C VS A +L + R+
Sbjct: 542 ENIDDSGFWALAYFSKNLRQINLCNCSVSDTALCMLMSNLSRVQ 585
>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
chr1:7497479-7499386 FORWARD LENGTH=360
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 155 YNSLESLNISCLSNEVNLPALERLVSRCPNLQTLRLNRAVPL-DR-LTNLLRGAPQLVEL 212
+ L++LN+ ++ A+E + + C LQ L L++++ + DR L L G P L +L
Sbjct: 89 FVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKL 148
Query: 213 GTGAYTAEMRPEVLANLTEAFSGCKQLKGLSGFWDVLPSYLPAVYPVCSGLTSLNLSYAT 272
T+ +A LT K L V + L A+ C+ + SLNL +
Sbjct: 149 NLSGCTS-FSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWC- 206
Query: 273 IQSPDHIKLVSQCGSLQRLWVLDYIEDAGLDVLAASCKDLRELRVFPSDPFGLEPNVALT 332
+ I D G+ LA C DLR L D G V +T
Sbjct: 207 ----------------------ENISDDGVMSLAYGCPDLRTL-----DLCGC---VLIT 236
Query: 333 EEGLISVSEGCPKLQSV-LYFCRQMSNAALNTIAQ----NRP 369
+E ++++++ C L+S+ LY+CR +++ A+ ++AQ N+P
Sbjct: 237 DESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKP 278
>AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein |
chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 45/210 (21%)
Query: 174 ALERLVSRCPNLQTLRLNRAVPL--DRLTNLLRGAPQLVELGTGAYTAEMRPEVLANLTE 231
A+E + + C LQ L L+++ + L +L RG L +L T+ LA+LT
Sbjct: 108 AVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTS-FSDTALAHLTR 166
Query: 232 AFSGCKQLK--GLSGFWD-VLPSYLPAVYPVCSGLTSLNLSYATIQSPDHIKLVSQCGSL 288
C++LK L G + V + L A+ C+ L SLNL +
Sbjct: 167 F---CRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWC----------------- 206
Query: 289 QRLWVLDYIEDAGLDVLAASCKDLRELRVFPSDPFGLEPNVALTEEGLISVSEGCPKLQS 348
+ I D G+ LA C DLR L + V +T+E +++++ C L+S
Sbjct: 207 ------ENISDDGVMSLAYGCPDLRTLDLCSC--------VLITDESVVALANRCIHLRS 252
Query: 349 V-LYFCRQMSNAALNTIAQ----NRPNMTR 373
+ LY+CR +++ A+ ++AQ N+ M R
Sbjct: 253 LGLYYCRNITDRAMYSLAQSGVKNKHEMWR 282
>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily
protein | chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 45/210 (21%)
Query: 174 ALERLVSRCPNLQTLRLNRAVPL--DRLTNLLRGAPQLVELGTGAYTAEMRPEVLANLTE 231
A+E + + C LQ L L+++ + L +L RG L +L T+ LA+LT
Sbjct: 108 AVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTS-FSDTALAHLTR 166
Query: 232 AFSGCKQLK--GLSGFWD-VLPSYLPAVYPVCSGLTSLNLSYATIQSPDHIKLVSQCGSL 288
C++LK L G + V + L A+ C+ L SLNL +
Sbjct: 167 F---CRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWC----------------- 206
Query: 289 QRLWVLDYIEDAGLDVLAASCKDLRELRVFPSDPFGLEPNVALTEEGLISVSEGCPKLQS 348
+ I D G+ LA C DLR L + V +T+E +++++ C L+S
Sbjct: 207 ------ENISDDGVMSLAYGCPDLRTLDLCSC--------VLITDESVVALANRCIHLRS 252
Query: 349 V-LYFCRQMSNAALNTIAQ----NRPNMTR 373
+ LY+CR +++ A+ ++AQ N+ M R
Sbjct: 253 LGLYYCRNITDRAMYSLAQSGVKNKHEMWR 282
>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
chr2:10848018-10850275 REVERSE LENGTH=628
Length = 628
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 175/454 (38%), Gaps = 76/454 (16%)
Query: 69 IKAMAAACPSLLEIRLKRM-VVTDDCLDLIAKSFKNFRVLVLISCEGFTTHGLAAIAANC 127
++++ +CPSL + L + +TD+ L IA+ L L C T GL AIA +C
Sbjct: 169 LRSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSC 228
Query: 128 RNLRELDLRE-SEVEDICGHWLSHFPDSYNSLESLNISCLSNEVNLPALERLVSRCPNLQ 186
NL EL L S + D L S + L+S++I N P + R +
Sbjct: 229 PNLTELTLEACSRIGD---EGLLAIARSCSKLKSVSIK------NCPLV-----RDQGIA 274
Query: 187 TLRLNRAVPLDRLTNLLRGAPQLVELGTGAYTAEMRPEVLANLTEAFSGCKQLKGLSGFW 246
+L N L +L + + G Y + VLA L+ GFW
Sbjct: 275 SLLSNTTCSLAKLKLQMLNVTDVSLAVVGHYGLSITDLVLAGLSHVSE--------KGFW 326
Query: 247 DV-----LPSYLPAVYPVCSGLTSLNLSYATIQSPDHIKLVSQCGSLQRLWVLDYIEDAG 301
+ L C G+T + L P+ K + L + D G
Sbjct: 327 VMGNGVGLQKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPL--------LSDNG 378
Query: 302 LDVLAASCKDLREL------RVFPSDPFG--LEPNVALTEEGLIS------------VSE 341
L A + L L RV FG L L L++ S
Sbjct: 379 LVSFAKASLSLESLQLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTTGLPASS 438
Query: 342 GCPKLQSV-LYFCRQMSNAALNTIAQNRPNMTRFRLCIIEPRTPDYLTHQPLDAGFGAIV 400
C L+S+ + C +A L I + P + LC ++ T ++GF ++
Sbjct: 439 HCSALRSLSIRNCPGFGDANLAAIGKLCPQLEDIDLCGLKGIT---------ESGFLHLI 489
Query: 401 QHCKNLQRLSLSGL--LTDRVFEYIGTYAK-KLEMLSVAFAGD-SDLGLHHVLSGCDNLR 456
Q +L +++ SG LTDRV I LE+L++ + +D L + + C L
Sbjct: 490 QS--SLVKINFSGCSNLTDRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILS 547
Query: 457 KLEIRDCPFGDKAL--LANAAKLETMRSLWMSSC 488
L+I C D + LA++ KL+ ++ L ++ C
Sbjct: 548 DLDISKCAISDSGIQALASSDKLK-LQILSVAGC 580
>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
chr5:8794842-8796882 REVERSE LENGTH=623
Length = 623
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 38/225 (16%)
Query: 291 LWVLDYIEDAGLDVLAASCKDLRELRVFPSDPFGLEPNVALTEEGLISVSEGCPKLQSV- 349
LW L + D GL +A SC + +L L +T+ GL++++E C L +
Sbjct: 174 LWNLPAVSDLGLSEIARSCPMIEKLD--------LSRCPGITDSGLVAIAENCVNLSDLT 225
Query: 350 LYFCRQMSNAALNTIAQNRPNM--TRFRLCIIEPRTPD------------YLTHQPLDA- 394
+ C + N L IA+ N+ R C PR D YLT L
Sbjct: 226 IDSCSGVGNEGLRAIARRCVNLRSISIRSC---PRIGDQGVAFLLAQAGSYLTKVKLQML 282
Query: 395 -----GFGAIVQHCKNLQRLSLSGL--LTDRVFEYIGTYA--KKLEMLSV-AFAGDSDLG 444
I + + L L GL + ++ F +G KKL+ LSV + G +D+G
Sbjct: 283 NVSGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVG 342
Query: 445 LHHVLSGCDNLRKLEIRDCPF-GDKALLANAAKLETMRSLWMSSC 488
L V +GC +L+ + + C K L+A A ++ SL + C
Sbjct: 343 LEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEEC 387