Miyakogusa Predicted Gene

Lj5g3v1667300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1667300.1 Non Chatacterized Hit- tr|I3S5R3|I3S5R3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.97,0,seg,NULL;
P-loop containing nucleoside triphosphate hydrolases,NULL;
Hypothetical protein YjiA, C-te,CUFF.55697.1
         (390 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26520.1 | Symbols:  | Cobalamin biosynthesis CobW-like prote...   515   e-146
AT1G15730.1 | Symbols:  | Cobalamin biosynthesis CobW-like prote...   245   5e-65
AT1G80480.1 | Symbols: PTAC17 | plastid transcriptionally active...   239   2e-63

>AT1G26520.1 | Symbols:  | Cobalamin biosynthesis CobW-like protein
           | chr1:9163448-9165594 REVERSE LENGTH=374
          Length = 374

 Score =  515 bits (1326), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 257/367 (70%), Positives = 295/367 (80%), Gaps = 9/367 (2%)

Query: 26  KMEHDEDEEAPLAVQIQ-----GLDESVSQQSSVGVTLITGYLGAGKSTLVNHILNSQHG 80
           KME D+DEE P+AVQI      G   S S   SVGV++ITGYLGAGKSTLVN+ILN +HG
Sbjct: 10  KME-DDDEEPPMAVQIHPDVSVGKVHSSSDTVSVGVSVITGYLGAGKSTLVNYILNGKHG 68

Query: 81  KRIAVILNEFGEEIGVERAMINEGDGGAMVEEWVELANGCICCTVKHSLVQALEQLVQRK 140
           KRIAVILNEFGEEIGVERAMINEG+ GA+VEEWVELANGC+CCTVKHSLVQALEQLVQRK
Sbjct: 69  KRIAVILNEFGEEIGVERAMINEGEEGAIVEEWVELANGCVCCTVKHSLVQALEQLVQRK 128

Query: 141 ERLDHILLETTGLANPAPLASVLWLDEQLESDVKLDSIVTVVDAKNVRLQIDQHRRSSSY 200
           +RLDHILLETTGLANPAPLAS+LWLD+QLES+VKLD IVTVVDAKN+R Q+++ R SSS+
Sbjct: 129 DRLDHILLETTGLANPAPLASILWLDDQLESEVKLDCIVTVVDAKNLRFQLNERRDSSSF 188

Query: 201 PEAYFQIAFADIIILNKVDLVSAEGSGALKELEEEIHNINSLVEIIHSVKCQVDLSKILN 260
           PEA+ QIAFAD II+NKVDL+S E S    ELE+EIH+INSL  +I SV+CQVDLS ILN
Sbjct: 189 PEAFNQIAFADTIIMNKVDLISQEES---DELEKEIHSINSLANVIRSVRCQVDLSNILN 245

Query: 261 RHAYDTARAPHXXXXXXXXXXXXXXXXHDSGVRTICISEQKTIDIDKTRIWLEEILWEKK 320
             AYD+                     HDSGVRT+CISE + I++DK R+WLEEILW+KK
Sbjct: 246 CQAYDSTHVSRLESLLEANKSLTTTDLHDSGVRTLCISEPQPINLDKVRLWLEEILWDKK 305

Query: 321 YDMDVYRCKGVLSVQNSDQLHTLQAVRELYEIVPARKWEREENRMNKIVFIGHNLKEDVL 380
            +MDVYRCK VLS+QNSDQ+H LQAVR++YEIVPARKW  EENR NKIVFIGH L E+VL
Sbjct: 306 SEMDVYRCKAVLSIQNSDQMHILQAVRDIYEIVPARKWSEEENRTNKIVFIGHKLDEEVL 365

Query: 381 IHSFRAC 387
               R C
Sbjct: 366 RSGLRDC 372


>AT1G15730.1 | Symbols:  | Cobalamin biosynthesis CobW-like protein
           | chr1:5407535-5409937 REVERSE LENGTH=448
          Length = 448

 Score =  245 bits (625), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 140/364 (38%), Positives = 207/364 (56%), Gaps = 37/364 (10%)

Query: 54  VGVTLITGYLGAGKSTLVNHILNSQHGKRIAVILNEFGEEIGVERAMINEGDGGAMVEEW 113
           +  T+ITG+LG+GK+TL+NHIL   HGKRIAVI NEFGE + ++ +++     GA  E+ 
Sbjct: 92  IPATIITGFLGSGKTTLLNHILTGDHGKRIAVIENEFGE-VDIDGSLVAAQTAGA--EDI 148

Query: 114 VELANGCICCTVKHSLVQALEQLVQ-RKERLDHILLETTGLANPAPLASVLWLDEQLESD 172
           + L NGC+CCTV+  LV+ + ++VQ +K R DHI++ETTGLANPAP+    + ++++ +D
Sbjct: 149 MMLNNGCLCCTVRGDLVRMISEMVQTKKGRFDHIVIETTGLANPAPIIQTFYAEDEIFND 208

Query: 173 VKLDSIVTVVDAKNVRLQIDQHRRSSSYPEAYFQIAFADIIILNKVDLVSAEGSGALKEL 232
           VKLD +VT+VDAK+ RL +D+ +      EA  QIA+AD II+NK DLV   G   L  +
Sbjct: 209 VKLDGVVTLVDAKHARLHLDEVKPEGYVNEAVEQIAYADRIIVNKTDLV---GEPELASV 265

Query: 233 EEEIHNINSLVEIIHSVKCQVDLSKILNRHAYDTAR------------------------ 268
            + I  INS+  +  +   +VDL  +L    +D  R                        
Sbjct: 266 MQRIKTINSMAHMKRTKYGKVDLDYVLGIGGFDLERIESSVNEEEKEDREGHDDHHHGHD 325

Query: 269 ----APHXXXXXXXXXXXXXXXXHDSGVRTICISEQKTIDIDKTRIWLEEILWEKKYDMD 324
                                  HD GV ++ I  +  +D++K  +WL  +L+++    D
Sbjct: 326 CHDHHNEHEHEHEHEHHHSHDHTHDPGVGSVSIVCEGDLDLEKANMWLGALLYQRSE--D 383

Query: 325 VYRCKGVLSVQNSDQLHTLQAVRELYEIVPARKWEREENRMNKIVFIGHNLKEDVLIHSF 384
           +YR KG+LSVQ+ D+    Q V E++E  P R W ++E R NKIVFIG NL  + L   F
Sbjct: 384 IYRMKGILSVQDMDERFVFQGVHEIFEGSPDRLWRKDETRTNKIVFIGKNLNREELEMGF 443

Query: 385 RACV 388
           RAC+
Sbjct: 444 RACL 447


>AT1G80480.1 | Symbols: PTAC17 | plastid transcriptionally active 17
           | chr1:30258272-30260570 REVERSE LENGTH=444
          Length = 444

 Score =  239 bits (611), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/369 (37%), Positives = 208/369 (56%), Gaps = 36/369 (9%)

Query: 48  VSQQSSVGVTLITGYLGAGKSTLVNHILNSQHGKRIAVILNEFGEEIGVERAMINEGDGG 107
           +   + +  T+ITG+LG+GK+TL+NHIL   HGKRIAVI NEFGE + ++ +++     G
Sbjct: 83  IPPDNRIPATIITGFLGSGKTTLLNHILTRDHGKRIAVIENEFGE-VDIDGSLVASKSIG 141

Query: 108 AMVEEWVELANGCICCTVKHSLVQALEQLVQ-RKERLDHILLETTGLANPAPLASVLWLD 166
           A  E+ V L NGC+CCTV+  LV+ + +LV  +K + DHI++ETTGLANPAP+    + +
Sbjct: 142 A--EDIVMLNNGCLCCTVRGDLVRMIGELVNTKKGKFDHIVIETTGLANPAPIIQTFYAE 199

Query: 167 EQLESDVKLDSIVTVVDAKNVRLQIDQHRRSSSYPEAYFQIAFADIIILNKVDLVSAEGS 226
           E++ +DVKLD +VT+VDAK+ RL +D+ +      EA  QIA+AD II+NK DLV   G 
Sbjct: 200 EEIFNDVKLDGVVTLVDAKHARLHLDEVKPEGVVNEAVEQIAYADRIIVNKTDLV---GE 256

Query: 227 GALKELEEEIHNINSLVEIIHSVKCQVDLSKILNRHAYDTAR------------------ 268
             L  + + I  INS+ ++  +    VDL  +L    +D  R                  
Sbjct: 257 AELGSVVQRIKTINSMAQMTRTKYGNVDLDYVLGIGGFDLERIESSVNEDDKGDHHDHDH 316

Query: 269 ---------APHXXXXXXXXXXXXXXXXHDSGVRTICISEQKTIDIDKTRIWLEEILWEK 319
                      H                HD GV ++ I  + ++D++K  +WL  +L E+
Sbjct: 317 DHHHDHNHDHDHHHHDGHDHHHHSHDHTHDPGVSSVSIVCEGSLDLEKANMWLGTLLMER 376

Query: 320 KYDMDVYRCKGVLSVQNSDQLHTLQAVRELYEIVPARKWEREENRMNKIVFIGHNLKEDV 379
               D+YR KG+LSV   ++    Q V ++++  P R W REE R+NKIVFIG NL  + 
Sbjct: 377 SE--DIYRMKGLLSVHTMEERFVFQGVHDIFQGSPDRLWGREEERVNKIVFIGKNLNREE 434

Query: 380 LIHSFRACV 388
           L   F+AC+
Sbjct: 435 LEKGFKACL 443