Miyakogusa Predicted Gene
- Lj5g3v1627970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1627970.1 tr|G7IF63|G7IF63_MEDTR Zinc finger CCCH
domain-containing protein OS=Medicago truncatula
GN=MTR_1g08,77.78,0,seg,NULL; ATP-DEPENDENT RNA HELICASE,NULL; no
description,NULL; helicase superfamily c-terminal doma,CUFF.55651.1
(927 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase famil... 1023 0.0
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 140 5e-33
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 134 2e-31
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 129 7e-30
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:214... 126 7e-29
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 120 5e-27
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 119 1e-26
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 119 1e-26
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 118 2e-26
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 117 3e-26
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 117 4e-26
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 115 1e-25
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 115 1e-25
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 115 2e-25
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 114 4e-25
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 109 1e-23
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 108 1e-23
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 105 2e-22
AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosph... 103 4e-22
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 100 3e-21
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu... 100 9e-21
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 97 4e-20
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204... 97 6e-20
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 90 7e-18
AT5G56930.1 | Symbols: emb1789 | CCCH-type zinc finger family pr... 50 7e-06
>AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase family
protein | chr2:19545828-19550871 REVERSE LENGTH=1015
Length = 1015
Score = 1023 bits (2644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/928 (57%), Positives = 655/928 (70%), Gaps = 15/928 (1%)
Query: 5 ARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDELQEKGMAALKYKAIILDEVHERS 64
+R LG E+GYHIGH K + SKI+FKTAGVLLDE+ +KG+ ALKYK IILDEVHERS
Sbjct: 91 SRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEMLDKGLNALKYKVIILDEVHERS 150
Query: 65 VESDLVLVCVKQFLLKN-DIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSNQKTV 123
VESDLVLVCVKQFL+KN D+RVVLMSATADI+RYRDYF++LGRGERVEV+AIPS +Q+T+
Sbjct: 151 VESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKELGRGERVEVVAIPSPDQRTI 210
Query: 124 FQRRVSYLEQVVESLGISSELMHSKDSHGLNPSTANARIKSELHTLIHALVLHIHVNEPD 183
FQRRV YLEQV LG+SS+L S G +PS+A+ IK EL LIH L+L+IH EPD
Sbjct: 211 FQRRVLYLEQVAGLLGVSSDL--SAYCPGPSPSSADTEIKPELQNLIHDLILYIHEKEPD 268
Query: 184 IEKSILVFLPTYNSLAQQWRLLKPLESTFEVHILHRSIDTEQALMAMKISKTHRKVILAT 243
IEKSILVFLPTY SL QQ+ L+P ++FEVHILHRSIDTEQAL AMKI ++ RKVILAT
Sbjct: 269 IEKSILVFLPTYYSLEQQYHQLEPFFASFEVHILHRSIDTEQALAAMKICRSRRKVILAT 328
Query: 244 NIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRGRTGRTCDGQV 303
NIAESSVTIPKVAYVIDSCRSLQV+WD SRK++A +LVWVS+SQAEQRRGRTGRTCDG+V
Sbjct: 329 NIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQRRGRTGRTCDGEV 388
Query: 304 YRLVTGSFFNSLEDHECPAILKLSLRLQVLSSCCAGSKAINDPKVLLQKALDPPDPQVVE 363
YRLV +FFN LE+HE P+ILKLSLR QVL CC S+AIND LL KA+DPPDP VV+
Sbjct: 389 YRLVPSAFFNKLEEHEPPSILKLSLRQQVLHICCTESRAINDANALLAKAMDPPDPDVVD 448
Query: 364 DALSMLVQMHALEKTTPRGRYEPTFYGRXXXXXXXXXXXXXXVLKFXXXXXXXXXXXXXX 423
DAL ML+ + AL K +PRGRYEPTFYGR V+KF
Sbjct: 449 DALRMLLSIQALRK-SPRGRYEPTFYGRLLASFPLSFDASILVVKFGEMGMLRQGILLGV 507
Query: 424 XMDTQPLPIIHPFGEDELFSRYIDCYY-DDKIILTGPKEMEFMGNFCAFEFWQHIFKDKY 482
MDT PLPI HPFG+D LF Y+D Y+ K I G +EM M NFCAF+FWQ +FKDK+
Sbjct: 508 LMDTLPLPIHHPFGDDSLFLEYVDHYFGGSKTISGGRREMVLMANFCAFQFWQRVFKDKH 567
Query: 483 RLENLKKILKTDNVYPATQSMRLEEEDWCSFHNLSQSSLHHVSEIYNDILHSVHRFRPNF 542
RLENLK++L + E++WC FHN++QSS +HVSE+Y D L S HRFRP F
Sbjct: 568 RLENLKQLLSKEKDKDLKLMFPEIEKEWCDFHNIAQSSFYHVSELYEDTLSSFHRFRPQF 627
Query: 543 LSSFHGLPPYYDPYEFKHTCLLKGQPNGHIDAVAADEDF---EPSSETKKCVAVPYVTSN 599
+SS P YY+PYEF HTC ++ QP+ D ED +P E +KCV+VP+V N
Sbjct: 628 ISSSDSQPTYYNPYEFDHTCYIECQPSE--DKYLHSEDVDNNQPPPEVRKCVSVPFVPPN 685
Query: 600 HFHSSDVAKMLATVIKELRAQYPEDASSHQPDGVDFDNFHVNGE--TCVYFIRGSCNRGN 657
F ++ +A+ +A++IKE+R Q S + ++ +++ GE CVYF+ G CNRG
Sbjct: 686 AFQANAIAENMASIIKEIRTQCTPSESDNGHGALEPEDYVEYGEAPVCVYFLNGYCNRGG 745
Query: 658 YCPFSHSLQAKRPQCKFFLSLQGCRNGESCLFSHVTGRSAPS-TSTNVCQPEDNDVNAAS 716
C F+H+LQ+ RP CKFF S QGCRNGESCLFSH R S C PE++ + +
Sbjct: 746 QCTFTHTLQSTRPACKFFASSQGCRNGESCLFSHAMRRRTTSYLPPPQCLPEEDGSSTSP 805
Query: 717 LLKWFPRSTNRSILILDDTDLHFTSCLARYYDPSKXXXXXXXXXXXXXXXXXPRARILWG 776
LL FP S+ IL+ DD+D+HFTS +A Y + RI WG
Sbjct: 806 LLDLFPTSSEGCILVFDDSDMHFTSSIANRYPSWRILSTSSSSETLFCDSSLADTRIFWG 865
Query: 777 LYHPYQTIIAKAG-QTLIPWNEVQCVLWFPSFDSYGDDLDGKKQLLQNFFEYLAIRILGD 835
L HPYQTII+KAG + IPWNEV+CVLWF + DSY D + +K +LQNFFE++AIR+LGD
Sbjct: 866 LNHPYQTIISKAGRENPIPWNEVKCVLWFLNPDSYADTPEKQKTILQNFFEHMAIRLLGD 925
Query: 836 DLHEVQVIITMNNIIFSQLQVEKLGRESFFILTESFAFDETSFGELH-VVTPRRPMLISR 894
L++++V++TMNN+ FS LQVEKL RESFF L ESF D SFG +T ++PML+SR
Sbjct: 926 KLYKIRVVLTMNNVRFSLLQVEKLARESFFFLGESFPHDSESFGAFQDTLTIQKPMLVSR 985
Query: 895 ATSYVFSLLPASDKHFGDYAATIKKQLH 922
SYVF+L P SD FG+Y + ++K LH
Sbjct: 986 PISYVFNLHPPSDIQFGNYTSLLRKSLH 1013
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 202/438 (46%), Gaps = 81/438 (18%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDEL-QEKGMAALKYKAIILDEV 60
++ R +GE VGY I E S ++++F T GVLL L ++ + + + +++DE+
Sbjct: 297 ISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSH--LLVDEI 354
Query: 61 HERSVESDLVLVCVKQFLLKN-DIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSN 119
HER + D +L+ ++ L + D+R++LMSAT + + YF + + IP
Sbjct: 355 HERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGN------SPTMHIPG-- 406
Query: 120 QKTVFQRRVSYLEQVVESLGISSELMHSKDSHGLNPSTANARIKSE-----LHTLIHALV 174
F +LE V+E S + S DS S+ R +SE L TL +
Sbjct: 407 --FTFPVAELFLEDVLEK---SRYNIKSSDSGNYQGSSRGRRRESESKKDDLTTLFEDID 461
Query: 175 LHIHVN-----------------------EPDIE--------KSILVFLPTYNSLAQQWR 203
++ H E IE +ILVFL ++ ++ +
Sbjct: 462 INSHYKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEIS---K 518
Query: 204 LLKPLE--------STFEVHILHRSIDT-EQALMAMKISKTHRKVILATNIAESSVTIPK 254
LL+ + S F V LH S+ T Q + + RK++LATNIAESS+TI
Sbjct: 519 LLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDD 578
Query: 255 VAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRGRTGRTCDGQVYRLVTGSFFNS 314
V YV+D ++ + +D K W+SK+ A QRRGR GR G YRL +++
Sbjct: 579 VVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDA 638
Query: 315 LEDHECPAILK-----LSLRLQVLSSCCAGSKAINDPKVLLQKALDPPDPQVVEDALSML 369
++ P I++ L L ++ L GS L KAL PPD VE+A+ +L
Sbjct: 639 FPQYQLPEIIRTPLQELCLHIKSLQVGSIGS--------FLAKALQPPDALAVENAIELL 690
Query: 370 VQMHAL---EKTTPRGRY 384
+ AL E+ TP GR+
Sbjct: 691 KTIGALNDVEELTPLGRH 708
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 203/435 (46%), Gaps = 72/435 (16%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDELQ-EKGMAALKYKAIILDEV 60
VA R QLGE VGY + E ++++F T G+LL L ++ + + + +I+DE+
Sbjct: 289 VAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVTH--VIVDEI 346
Query: 61 HERSVESDLVLVCVKQFL-LKNDIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSN 119
HER + D +L+ +K L +++++++LMSAT D + YF G V+ IP
Sbjct: 347 HERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAG------VIYIPG-- 398
Query: 120 QKTVFQRRVSYLEQVVESLGISSELMHSKDSHG------LNPSTANARIKSEL------- 166
+ R +LE ++E + D +G +N R KS++
Sbjct: 399 --FTYPVRSHFLEDILEMTRYRLTPYNQIDDYGQERTWKMNKQIPKKR-KSQITFVVEDA 455
Query: 167 --------------------------HTLIHALVLHIHVNEPDIEKSILVFLPTYNSLAQ 200
LI L+ +I NE IL+FL ++ ++
Sbjct: 456 LRAADFKEFSPETRESLSCWYPDCIGFNLIEFLLCNICENEG--PGGILIFLTGWDDISS 513
Query: 201 QWRLLK--PLESTFEVHIL---HRSIDT-EQALMAMKISKTHRKVILATNIAESSVTIPK 254
L+ P+ ++ +L H S++T EQ L+ + + RK++LATNIAE+S+TI
Sbjct: 514 LKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITIND 573
Query: 255 VAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRGRTGRTCDGQVYRLVTGSFFNS 314
VA+VID ++ + +D W+SK A+QRRGR GR GQ Y L +++
Sbjct: 574 VAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDA 633
Query: 315 LEDHECPAILKLSLRLQVLSSCCAGSKAINDPKV--LLQKALDPPDPQVVEDALSMLVQM 372
+++ P IL+ L S C K++N + L +AL P+ V+ A++ L +
Sbjct: 634 FAEYQLPEILRTPLH-----SLCLQIKSLNLGSISEFLSRALQSPELLAVQKAIAFLKII 688
Query: 373 HAL---EKTTPRGRY 384
AL E T GRY
Sbjct: 689 GALDENEDLTTLGRY 703
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 129 bits (325), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 189/389 (48%), Gaps = 62/389 (15%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDE-LQEKGMAALKYKAIILDEV 60
VA+ C+LGEEVGY I E + I + T G+LL E L ++ ++ +Y I+LDE
Sbjct: 580 VAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS--QYSVIMLDEA 637
Query: 61 HERSVESDLVLVCVKQFLLKN-DIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSN 119
HER++ +D++ +K+ + + D+R+++ SAT D ++ YF + + IP
Sbjct: 638 HERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFN------CNIFTIPGRT 691
Query: 120 QKTVFQRRVSYLEQVVESLGISSELMHSKDSHGLNPSTANARIKSELHTLIHAL--VLHI 177
E++++K + E L AL VL I
Sbjct: 692 --------------------FPVEILYTK--------------QPETDYLDAALITVLQI 717
Query: 178 HVNEPDIEKSILVFLPTY-------NSLAQQWRLLKPLESTFEVHILHRSIDTE-QALMA 229
H+ EP E ILVFL SL ++ + L + ++ ++ +E Q+ +
Sbjct: 718 HLTEP--EGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF 775
Query: 230 MKISKTHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAE 289
RKV++ATNIAE+S+TI + YV+D + Q ++ + E+ + +S++ A+
Sbjct: 776 DPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAK 835
Query: 290 QRRGRTGRTCDGQVYRLVTGSFF-NSLEDHECPAILKLSLRLQVLSSCCAGSKAINDPKV 348
QR GR GRT G+ YRL T S + N + P I +++L + L+ G IND +
Sbjct: 836 QRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMG---IND--L 890
Query: 349 LLQKALDPPDPQVVEDALSMLVQMHALEK 377
L +DPP PQ + A+ L + AL++
Sbjct: 891 LSFDFMDPPQPQALISAMEQLYSLGALDE 919
>AT1G58050.1 | Symbols: | RNA helicase family protein |
chr1:21478590-21487839 REVERSE LENGTH=1417
Length = 1417
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 196/418 (46%), Gaps = 55/418 (13%)
Query: 14 VGYHIGHEKNFSASSKIVFKTAGVLLDELQEKGMAALK-YKAIILDEVHERSVESDLVLV 72
V Y + H+ S ++++F T G+LL +L G LK II+DEVHERS+ D +L+
Sbjct: 679 VAYQVRHQNARSDKTRLLFCTTGILLRKLV--GDTTLKDVTHIIVDEVHERSLMGDFLLI 736
Query: 73 CVKQFLLKND-------IRVVLMSATADISRYRDYFRDL------GRGERVEVLAIPSSN 119
+K + K ++V+LMSAT D ++ YF GR V +
Sbjct: 737 ILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIY 796
Query: 120 QKTVF------QRRVSYLEQVVESLGI------SSELMHSK--DSHGLNPSTANARIKSE 165
++T + +S + + LG LM + DS+ ++ + N S
Sbjct: 797 ERTKYLLASDSPAALSSDTSITDKLGSVNVPRGKKNLMLAGWGDSYLVSEDSLNTSYDS- 855
Query: 166 LHTLIHALV-------LHIHVNEPDIEKSILVFLPTY-------NSLAQQWRLLKPLEST 211
+ + A+V L H+++ E +ILVFLP N LA +R S
Sbjct: 856 IKYIASAVVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGA--SG 913
Query: 212 FEVHILHRSI-DTEQALMAMKISKTHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWD 270
+ LH SI TEQ + ++ K RKVI+ATNIAE+S+TI V YVIDS + + ++
Sbjct: 914 DWLLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYN 973
Query: 271 KSRKKEASKLVWVSKSQAEQRRGRTGRTCDGQVYRLVTGSFFNSL-EDHECPAILKLSLR 329
+K + WVSK+ A QR GR GR G + L T F L ++ P +L++ L
Sbjct: 974 PHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLV 1033
Query: 330 LQVLSSCCAGSKAINDPKVLLQKALDPPDPQVVEDALSMLVQMHAL---EKTTPRGRY 384
L G I K L KAL+PP + A+ +L ++ AL E+ TP G +
Sbjct: 1034 ELCLHIKLLGLGQI---KPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHH 1088
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 181/400 (45%), Gaps = 79/400 (19%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDELQEKGMAALKYKAIILDEVH 61
VA+ +GEEVGY I E S + + + T G+LL E + +YK IILDE H
Sbjct: 132 VAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLE-RYKVIILDEAH 190
Query: 62 ERSVESDLVLVCVKQFLLKN--DIRVVLMSATADISRYRDYFRDL------GRGERVEVL 113
ER++ +D++ +K+ +LKN D+++V+MSAT + +++DYF GR VE+
Sbjct: 191 ERTLATDVLFGLLKE-VLKNRPDLKLVVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIF 249
Query: 114 AIPSSNQKTVFQRRVSYLEQVVESLGISSELMHSKDSHGLNPSTANARIKSELHTLIHAL 173
+ YLE + +
Sbjct: 250 YTQEPER--------DYLEAAIRT------------------------------------ 265
Query: 174 VLHIHVNEPDIEKSILVFLPTYNSLAQQWRLLK----------------PLESTFEVHIL 217
V+ IH+ EP ILVFL + R + PL ST +
Sbjct: 266 VVQIHMCEP--PGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQ 323
Query: 218 HRSIDTEQALMAMKISKTHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEA 277
+ D + + RK++++TNIAE+S+TI + YVID + Q ++ + E+
Sbjct: 324 QKIFDPAPEPVT-EGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVES 382
Query: 278 SKLVWVSKSQAEQRRGRTGRTCDGQVYRLVT-GSFFNSLEDHECPAILKLSLRLQVLSSC 336
+ +SK+ A QR GR GRT G+ +RL T SF N L+ P IL+ +L VL+
Sbjct: 383 LLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLK 442
Query: 337 CAGSKAINDPKVLLQKALDPPDPQVVEDALSMLVQMHALE 376
G I+D ++ +DPP P+ + AL +L + AL+
Sbjct: 443 KLG---IDD--LVHFDFMDPPAPETLMRALEVLNYLGALD 477
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 179/399 (44%), Gaps = 77/399 (19%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDELQEKGMAALKYKAIILDEVH 61
VA +GEEVGY I E S+ + + + T G+LL E + +YK IILDE H
Sbjct: 136 VADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLE-RYKVIILDEAH 194
Query: 62 ERSVESDLVLVCVKQFLL-KNDIRVVLMSATADISRYRDYFRDL------GRGERVEVLA 114
ER++ +D++ +K+ L + D+++V+MSAT + ++++YF GR VE+
Sbjct: 195 ERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFY 254
Query: 115 IPSSNQKTVFQRRVSYLEQVVESLGISSELMHSKDSHGLNPSTANARIKSELHTLIHALV 174
+ YLE + + V
Sbjct: 255 TQEPER--------DYLEAAIRT------------------------------------V 270
Query: 175 LHIHVNEPDIEKSILVFLPTYNSLAQQWRLLK----------------PLESTFEVHILH 218
+ IH+ EP ILVFL + R + PL ST +
Sbjct: 271 VQIHMCEP--PGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQ 328
Query: 219 RSIDTEQALMAMKISKTHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEAS 278
+ D + + RK++++TNIAE+S+TI + YVID + Q ++ + E+
Sbjct: 329 KIFDPAPVPLT-EGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESL 387
Query: 279 KLVWVSKSQAEQRRGRTGRTCDGQVYRLVT-GSFFNSLEDHECPAILKLSLRLQVLSSCC 337
+ +SK+ A QR GR GRT G+ +RL T SF N L+ P IL+ +L VL+
Sbjct: 388 LVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKK 447
Query: 338 AGSKAINDPKVLLQKALDPPDPQVVEDALSMLVQMHALE 376
G I+D ++ +DPP P+ + AL +L + AL+
Sbjct: 448 LG---IDD--LVHFDFMDPPAPETLMRALEVLNYLGALD 481
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 183/385 (47%), Gaps = 58/385 (15%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDEL-QEKGMAALKYKAIILDEV 60
VAQ +LG EVGY I E S + + + T G+LL EL E + + Y II+DE
Sbjct: 469 VAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGS--YSVIIVDEA 526
Query: 61 HERSVESDLVLVCVKQFL-LKNDIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSN 119
HER++ +D++ VK + D+++++ SAT D ++ D+F ++ + P
Sbjct: 527 HERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFF------DQAPIFRFPG-- 578
Query: 120 QKTVFQRRVSYLEQVVESLGISSELMHSKDSHGLNPSTANARIKSELHTLIHALVLHIHV 179
RR Y + + ++ M +A I + VL IHV
Sbjct: 579 ------RR--YPVDICFTTAPEADYM-------------DAAITT---------VLTIHV 608
Query: 180 NEPDIEKSILVFLP-------TYNSLAQQWRLLKPLESTFEVHILHRSIDTE-QALMAMK 231
EP +LVFLP +L + R L + ++ ++ +E QA +
Sbjct: 609 KEP--LGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEP 666
Query: 232 ISKTHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQR 291
+ RKV+LATNIAE+S+TI + YV+D S ++ E+ + +SK+ A QR
Sbjct: 667 TPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQR 726
Query: 292 RGRTGRTCDGQVYRLVTG-SFFNSLEDHECPAILKLSLRLQVLSSCCAGSKAINDPKVLL 350
GR GRT G+ YRL T +++N LED+ P I + +L VLS K++ +L
Sbjct: 727 TGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLS-----LKSLGIHNLLN 781
Query: 351 QKALDPPDPQVVEDALSMLVQMHAL 375
+DPP + + +L +L + AL
Sbjct: 782 FDFMDPPPSEALIKSLELLFALGAL 806
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 184/399 (46%), Gaps = 50/399 (12%)
Query: 2 VAQARKCQLGEEVGYHIGHEK-NFSASSKIVFKTAGVLLDELQEKGMAALKYKAIILDEV 60
VA+ LGEEVGY I E S + + F T GVL+ E+ E + KY I++DE
Sbjct: 114 VAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLT-KYSVIMIDEA 172
Query: 61 HERSVESDLVLVCVKQFLLKN-DIRVVLMSATADISRYRDYFRDLGR---------GERV 110
HERS+ +D++L +K+ + ++R+++ SAT + ++F + G ++
Sbjct: 173 HERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRHAPEGSTPGPKL 232
Query: 111 EVLAIPSSNQKTVFQRRVSYLEQVVESL--GISSELMHSKDSHGLNPSTANARIKSELHT 168
E + S + F ++ Y+E+ V + S ++ + + ++ T
Sbjct: 233 EPAIL--SVEGRGFSVKIHYVEEPVSDYIRSVVSTILLINEREPPGDVLVFLTGQEDIET 290
Query: 169 LIHALVLHIHVNEPDIEKSILVFLPTYNSLAQQWRLLKPLESTFEVHILHRSIDTEQALM 228
I L H N+ + S L+ LP Y+ L++ +EQ L+
Sbjct: 291 AIKLLEEEAHSNQKN--SSGLLPLPLYSGLSR----------------------SEQELI 326
Query: 229 AMKISKTHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQA 288
+ RKVIL+TNIAE+S+T+ V YVIDS S Q +++ E+ + +SK+ A
Sbjct: 327 FTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASA 386
Query: 289 EQRRGRTGRTCDGQVYRLVTGSFF-NSLEDHECPAILKLSLRLQVLSSCCAGSKAINDPK 347
QR GR GR G+ YRL T +F N + P + + +L V+ KA+
Sbjct: 387 RQRSGRAGRVRPGKCYRLYTEDYFLNQMPGEGIPEMQRSNLVSTVIQ-----LKALGIDN 441
Query: 348 VLLQKALDPPDPQVVEDALSMLVQMHALEK----TTPRG 382
+L PP + + AL +L + L+ T+P G
Sbjct: 442 ILGFDWPAPPSSEAMIRALEVLYSLQILDDDAKLTSPTG 480
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 172/358 (48%), Gaps = 56/358 (15%)
Query: 27 SSKIVFKTAGVLLDE-LQEKGMAALKYKAIILDEVHERSVESDLVLVCVKQFLLKN-DIR 84
SSK+V+ T LL ++++ ++ + +I+DE HERS+ +DL+L +++ L + D+R
Sbjct: 394 SSKVVYMTDNCLLQHYMKDRSLSGIS--CVIIDEAHERSLNTDLLLALLRKLLSRRIDLR 451
Query: 85 VVLMSATADISRYRDYFRDLG------RGERVEVLAIPSSNQK-TVFQRRVSYLEQVVES 137
+V+MSATAD ++ Y D G R VE++ PS ++ +V R SY VV+
Sbjct: 452 LVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVK- 510
Query: 138 LGISSELMHSKDSHGLNPSTANARIKSELHTLIHALVLHIHVNEPDIEKSILVFLPTYNS 197
+ + IH E E +IL FL +
Sbjct: 511 -----------------------------------MAVEIHKTEK--EGTILAFLTSQAE 533
Query: 198 LAQQWRLLKPLESTFEVHILHRSIDTEQALMAMKISKTHRKVILATNIAESSVTIPKVAY 257
+ +W + + + LH + E+ M + RKVI ATNIAE+S+TIP V Y
Sbjct: 534 V--EWACERFVAPSAIALPLHGKLSFEEQFMVFQNYPGRRKVIFATNIAETSLTIPGVKY 591
Query: 258 VIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRGRTGRTCDGQVYRLVTGSFFNSLED 317
VIDS + ++ K+ VS+S A QR GR GRT G+ YRL + + F+S+
Sbjct: 592 VIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNL 651
Query: 318 HECPAILKLSLRLQVLSSCCAGSKAINDPKVLLQKALDPPDPQVVEDALSMLVQMHAL 375
++ P I ++ L + +L G I + +D P P+ + A+ LVQ+ A+
Sbjct: 652 NQEPEIRRVHLGVALLRMLALGIDNIAAFEF-----VDAPVPEAIAMAIQNLVQLGAV 704
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 181/388 (46%), Gaps = 56/388 (14%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDELQEKGMAALKYKAIILDEVH 61
VAQ LGE+VGY I E ++ ++I + T GVLL E M Y IILDE H
Sbjct: 69 VAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLD-DYSVIILDEAH 127
Query: 62 ERSVESDLVLVCVKQF--LLKNDIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSN 119
ERS+ +D++L VK+ + ++ +V++ SAT D + ++F VL +P
Sbjct: 128 ERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSG------CPVLNVPGKL 181
Query: 120 QKTVFQRRVSYLEQVVESLGISSELMHSKDSHGLNPSTANARIKSELHTLIHALVLHIHV 179
E+++SK+ + I+S L I IHV
Sbjct: 182 YPV--------------------EILYSKER-------PVSYIESSLKVAI-----DIHV 209
Query: 180 NEPDIEKSILVFLPTYNSLAQQW-RLLKPLESTFE-------VHILHRSIDTEQALMAMK 231
EP E IL+F+ + + + RL + + S E ++ LH S+ E +
Sbjct: 210 REP--EGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFS 267
Query: 232 ISKTH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQ 290
+ R+ I++TNIAE+S+T+ V YVIDS Q ++ S + ++ +SK QA Q
Sbjct: 268 PPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQ 327
Query: 291 RRGRTGRTCDGQVYRLVTGSFF-NSLEDHECPAILKLSLRLQVLSSCCAGSKAINDPKVL 349
R GR GRT G+ YRL + + + D P I + SL VL S + D +L
Sbjct: 328 RAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVL---YLKSLDLPDIDIL 384
Query: 350 LQKALDPPDPQVVEDALSMLVQMHALEK 377
LD P + +EDAL L + A+++
Sbjct: 385 KFDFLDAPSSESLEDALKQLYFIDAIDE 412
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein
| chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 178/389 (45%), Gaps = 62/389 (15%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDEL-QEKGMAALKYKAIILDEV 60
VAQ +LG EVGY I E S + + + T G+LL EL E +A+ Y +I+DE
Sbjct: 469 VAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLAS--YSVVIVDEA 526
Query: 61 HERSVESDLVLVCVKQFL-LKNDIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSN 119
HER++ +D++ VK + D+++++ SAT D ++ DYF + + + P
Sbjct: 527 HERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYF------DTAPIFSFPG-- 578
Query: 120 QKTVFQRRVSYLEQVVESLGISSELMHSKDSHGLNPSTANARIKSELHTLIHALV--LHI 177
RR P N E + A+V L I
Sbjct: 579 ------RRY--------------------------PVEINYTSAPEADYMDAAIVTILTI 606
Query: 178 HVNEPDIEKSILVFLPTYNSLAQQWRLLKPLESTFEVHI-------LHRSIDTE-QALMA 229
HV EP ILVF + +LK I ++ ++ +E QA +
Sbjct: 607 HVREP--LGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIF 664
Query: 230 MKISKTHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAE 289
+ RKV+LATNIAE+S+TI + YV+D S ++ E+ + +SK+ A
Sbjct: 665 EPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASAT 724
Query: 290 QRRGRTGRTCDGQVYRLVTG-SFFNSLEDHECPAILKLSLRLQVLSSCCAGSKAINDPKV 348
QR GR GRT G+ YRL T ++ N LE++ P + + +L VL+ G I+D +
Sbjct: 725 QRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLG---IHD--L 779
Query: 349 LLQKALDPPDPQVVEDALSMLVQMHALEK 377
+ +DPP + + +L +L + AL K
Sbjct: 780 INFDFMDPPPAEALVKSLELLFALGALNK 808
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 178/389 (45%), Gaps = 62/389 (15%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDEL-QEKGMAALKYKAIILDEV 60
VAQ +LG EVGY I E S + + + T G+LL EL E +A+ Y +I+DE
Sbjct: 459 VAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLAS--YSVVIVDEA 516
Query: 61 HERSVESDLVLVCVKQFL-LKNDIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSN 119
HER++ +D++ VK + D+++++ SAT D ++ DYF + + + P
Sbjct: 517 HERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYF------DTAPIFSFPG-- 568
Query: 120 QKTVFQRRVSYLEQVVESLGISSELMHSKDSHGLNPSTANARIKSELHTLIHALV--LHI 177
RR P N E + A+V L I
Sbjct: 569 ------RRY--------------------------PVEINYTSAPEADYMDAAIVTILTI 596
Query: 178 HVNEPDIEKSILVFLPTYNSLAQQWRLLKPLESTFEVHI-------LHRSIDTE-QALMA 229
HV EP ILVF + +LK I ++ ++ +E QA +
Sbjct: 597 HVREP--LGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIF 654
Query: 230 MKISKTHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAE 289
+ RKV+LATNIAE+S+TI + YV+D S ++ E+ + +SK+ A
Sbjct: 655 EPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASAT 714
Query: 290 QRRGRTGRTCDGQVYRLVTG-SFFNSLEDHECPAILKLSLRLQVLSSCCAGSKAINDPKV 348
QR GR GRT G+ YRL T ++ N LE++ P + + +L VL+ G I+D +
Sbjct: 715 QRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLG---IHD--L 769
Query: 349 LLQKALDPPDPQVVEDALSMLVQMHALEK 377
+ +DPP + + +L +L + AL K
Sbjct: 770 INFDFMDPPPAEALVKSLELLFALGALNK 798
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 197/436 (45%), Gaps = 78/436 (17%)
Query: 14 VGYHIGHEKNFSASSKIVFKTAGVLLDELQ-EKGMAALKYKAIILDEVHERSVESDLVLV 72
VGY + E S ++++F T G+LL +L ++ + + + II+DEVHERS+ D +L+
Sbjct: 699 VGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTH--IIVDEVHERSLLGDFLLI 756
Query: 73 CVKQFLLKND-------IRVVLMSATADISRYRDYF------RDLGRG------------ 107
+K + K ++V+LMSAT D + YF GR
Sbjct: 757 ILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIY 816
Query: 108 ERVEVLAIPSS------------NQKTVFQRRVS-----------YL--EQVVESLGISS 142
E + L P S +V RR YL E + +SS
Sbjct: 817 ESINYLLAPDSPAALRSDTSIKDKLGSVNDRRGKKNLVLAGWGDDYLLSEDCLNPFYVSS 876
Query: 143 ELMHSKDSHGLNPSTANA-RIKSELHTLIHALVLHIHVNEPDIEKSILVFLPTYNSLAQQ 201
D N N RI EL + L+ HI ++ E +IL+FLP +A+
Sbjct: 877 NYNSYSDQTQQNLKRLNEDRIDYEL---LEELICHI--DDTCEEGAILIFLP---GVAEI 928
Query: 202 WRLLKPLESTFEVH--------ILHRSI-DTEQALMAMKISKTHRKVILATNIAESSVTI 252
+ LL L +++ LH SI +EQ + ++ K RKVI ATNIAE+S+TI
Sbjct: 929 YMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITI 988
Query: 253 PKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRGRTGRTCDGQVYRLVTGSFF 312
V YVIDS + + ++ +K + W+S++ A QR GR GR G + L T F
Sbjct: 989 DDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRF 1048
Query: 313 NSL-EDHECPAILKLSLRLQVLSSCCAGSKAINDPKVLLQKALDPPDPQVVEDALSMLVQ 371
L ++ P +L++ L L G I K L +AL+PP + A+S+L +
Sbjct: 1049 EKLMRPYQVPEMLRMPLVELCLQIKLLGLGHI---KPFLSRALEPPSEGAMTSAISLLHE 1105
Query: 372 MHAL---EKTTPRGRY 384
+ A+ E+ TP G +
Sbjct: 1106 VGAVEGDEELTPLGHH 1121
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 170/358 (47%), Gaps = 56/358 (15%)
Query: 27 SSKIVFKTAGVLLDE-LQEKGMAALKYKAIILDEVHERSVESDLVLVCVKQFLLKN-DIR 84
SSK+V+ T LL ++++ ++ + +I+DE HERS+ +DL+L +K+ L + D+R
Sbjct: 397 SSKVVYMTDNCLLQHYMKDRSLSGIS--CVIIDEAHERSLNTDLLLALLKKLLSRRIDLR 454
Query: 85 VVLMSATADISRYRDYFRDLG------RGERVEVLAIPS-SNQKTVFQRRVSYLEQVVES 137
+V+MSATAD + YF G R VE++ PS + + +V SY+ VV+
Sbjct: 455 LVIMSATADAKQLSQYFFSCGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVK- 513
Query: 138 LGISSELMHSKDSHGLNPSTANARIKSELHTLIHALVLHIHVNEPDIEKSILVFLPTYNS 197
+ + IH E E +IL FL +
Sbjct: 514 -----------------------------------MAVEIHKTEK--EGTILAFLTSQAE 536
Query: 198 LAQQWRLLKPLESTFEVHILHRSIDTEQALMAMKISKTHRKVILATNIAESSVTIPKVAY 257
+ +W + + + LH + E+ + RKVI ATNIAE+S+TIP V Y
Sbjct: 537 V--EWACERFITPSAIALPLHGKLSFEEQFRVFQNHPGRRKVIFATNIAETSLTIPGVKY 594
Query: 258 VIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRGRTGRTCDGQVYRLVTGSFFNSLED 317
VIDS + ++ K+ VS+S A QR GR GRT G+ YRL + + F+S+
Sbjct: 595 VIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMNL 654
Query: 318 HECPAILKLSLRLQVLSSCCAGSKAINDPKVLLQKALDPPDPQVVEDALSMLVQMHAL 375
++ P I ++ L + +L G I + +D P P+ + A+ LVQ+ A+
Sbjct: 655 NQEPEIRRVHLGVALLRMLALGVNNIAEFNF-----VDAPVPEAIAMAVQNLVQLGAV 707
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 201/430 (46%), Gaps = 63/430 (14%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDELQ-EKGMAALKYKAIILDEV 60
VA R Q+GE VGY + E ++++F T GVLL L ++ + + + +++DE+
Sbjct: 368 VAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTH--VVVDEI 425
Query: 61 HERSVESDLVLVCVKQFLLKN-DIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSN 119
HER + D +L+ +K L + D++++LMSAT + + YF + IP
Sbjct: 426 HERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGG------APAMHIPG-- 477
Query: 120 QKTVFQRRVSYLEQVVESLG--------------------------------ISS---EL 144
+ R +LE +E+ G ISS +
Sbjct: 478 --FTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKRKSLISSAVEDA 535
Query: 145 MHSKDSHGLNPSTANARIKSELHTLIHALVLHI--HVNEPDIEKSILVFLPTY---NSLA 199
+ + D G N T ++ ++ L+ ++ H+ + + ++LVF+ + NSL
Sbjct: 536 LEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLK 595
Query: 200 QQWRLLKPLESTFEVHIL--HRSI-DTEQALMAMKISKTHRKVILATNIAESSVTIPKVA 256
Q L +V +L H S+ +EQ L+ + + RK++LATN+AE+S+TI V
Sbjct: 596 NQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVV 655
Query: 257 YVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRGRTGRTCDGQVYRLVTGSFFNSLE 316
YVID ++ + +D W+SK+ A QRRGR GR G+ Y L + +
Sbjct: 656 YVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFA 715
Query: 317 DHECPAILKLSLRLQVLSSCCAGSKAINDPKVLLQKALDPPDPQVVEDALSMLVQMHAL- 375
D++ P +L+ L+ L G +I++ L +AL PP+ V++A+ L + AL
Sbjct: 716 DYQQPELLRTPLQSLCLQIKSLGLGSISE---FLSRALQPPEALSVQNAVEYLKIIGALD 772
Query: 376 --EKTTPRGR 383
E TP G+
Sbjct: 773 DDENLTPLGK 782
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 201/430 (46%), Gaps = 63/430 (14%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDELQ-EKGMAALKYKAIILDEV 60
VA R Q+GE VGY + E ++++F T GVLL L ++ + + + +++DE+
Sbjct: 368 VAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTH--VVVDEI 425
Query: 61 HERSVESDLVLVCVKQFLLKN-DIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSN 119
HER + D +L+ +K L + D++++LMSAT + + YF + IP
Sbjct: 426 HERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGG------APAMHIPG-- 477
Query: 120 QKTVFQRRVSYLEQVVESLG--------------------------------ISSEL--- 144
+ R +LE +E+ G ISS +
Sbjct: 478 --FTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKRKSLISSAVEDA 535
Query: 145 MHSKDSHGLNPSTANARIKSELHTLIHALVLHI--HVNEPDIEKSILVFLPTY---NSLA 199
+ + D G N T ++ ++ L+ ++ H+ + + ++LVF+ + NSL
Sbjct: 536 LEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLK 595
Query: 200 QQWRLLKPLESTFEVHIL--HRSI-DTEQALMAMKISKTHRKVILATNIAESSVTIPKVA 256
Q L +V +L H S+ +EQ L+ + + RK++LATN+AE+S+TI V
Sbjct: 596 NQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVV 655
Query: 257 YVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRGRTGRTCDGQVYRLVTGSFFNSLE 316
YVID ++ + +D W+SK+ A QRRGR GR G+ Y L + +
Sbjct: 656 YVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFA 715
Query: 317 DHECPAILKLSLRLQVLSSCCAGSKAINDPKVLLQKALDPPDPQVVEDALSMLVQMHAL- 375
D++ P +L+ L+ L G +I++ L +AL PP+ V++A+ L + AL
Sbjct: 716 DYQQPELLRTPLQSLCLQIKSLGLGSISE---FLSRALQPPEALSVQNAVEYLKIIGALD 772
Query: 376 --EKTTPRGR 383
E TP G+
Sbjct: 773 DDENLTPLGK 782
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 187/409 (45%), Gaps = 40/409 (9%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDE-LQEKGMAALKYKAIILDEV 60
VA+ + QLG++VGY I + S S+++ + T G+LL E L + ++ +Y II+DE
Sbjct: 107 VAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLS--RYSVIIVDEA 164
Query: 61 HERSVESDLVLVCVKQFLLKNDIRVVLMSATADI-SRYRDYFRDLGRGERVEVLAIPSSN 119
H+RSV +D++L +K+ V + ++ S+ + RD ++ VL
Sbjct: 165 HDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQQNGVL------ 218
Query: 120 QKTVFQRRVSYLEQVVESLGISSELMHSKDSHGLNPSTANARIKSELHTLIH-------- 171
K R++S L+ ++ S + + + + ++ +H
Sbjct: 219 -KGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDA 277
Query: 172 --ALVLHIHVNEPDIEKSILVFLPTYNSLAQQWRLLKP-LESTFEVH------ILHRSID 222
+ IH E ILVFL + + RL++ L++ E + ++
Sbjct: 278 TLVTIFQIHFEEKP--GDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALP 335
Query: 223 TEQALMAMKISKTH-RKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLV 281
+EQ + + T RKVILATNIAE+S+TIP + YVID +D S+ E+ +V
Sbjct: 336 SEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVV 395
Query: 282 WVSKSQAEQRRGRTGRTCDGQVYRLVTGSFFNSLEDHECPAILKLSLRLQVLSSCCAGSK 341
SK+Q QR GR GR G+ +RL F LED P I + + LS+ K
Sbjct: 396 PASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCN-----LSNIILQLK 450
Query: 342 AINDPKVLLQKALDPPDPQVVEDALSMLVQMHALEKTTPRGRYE-PTFY 389
A+ ++ +D P + AL+ ++H+L G+ E P Y
Sbjct: 451 ALGIDDIVGFDFIDKPSRGAIIKALA---ELHSLGALADDGKLENPVGY 496
>AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:9388613-9390774
REVERSE LENGTH=656
Length = 656
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 178/384 (46%), Gaps = 56/384 (14%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDELQ-EKGMAALKYKAIILDEV 60
VAQ +LG EVGY I E S + I + T G+LL EL E + + Y II+DE
Sbjct: 280 VAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDS--YSVIIIDEA 337
Query: 61 HERSVESDLVLVCVKQFL-LKNDIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSN 119
HER++ +D++ VK ++ D+R+++ SAT + ++ +YF + + IP
Sbjct: 338 HERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYF------DSARIYLIPGRR 391
Query: 120 Q--KTVFQR--RVSYLEQVVESLGISSELMHSKDSHG--LNPSTANARIKSELHTLIHAL 173
+ +F++ YLE V+ ++ +H ++ G L T I++ + T +
Sbjct: 392 YPVEKLFRKCPEPDYLETVIRTV----VQIHQTEAIGDILVFLTGQEEIET-VETNLKRR 446
Query: 174 VLHIHVNEPDIEKSILVFLPTYNSLAQQWRLLKPLESTFEVHILHRSIDTEQALMAMKIS 233
++ + +I + P Y++L PL QA +
Sbjct: 447 MMDLGTKGSEI-----IICPIYSNLPT------PL----------------QAKVFEPAP 479
Query: 234 KTHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRG 293
K RKV+LATNIAE+S+TI V YVID ++ E+ + +SK+ A QR G
Sbjct: 480 KGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTPISKASAAQRAG 539
Query: 294 RTGRTCDGQVYRLVTGSFFNSLEDHECPAILKLSLRLQVLSSCCAGSKAINDPKVLLQKA 353
R+GRT G+ +RL LE P I + +L VL+ G I D V
Sbjct: 540 RSGRTGPGKCFRLYN---IKDLEPTTIPEIQRANLASVVLTLKSLG---IQD--VFNFDF 591
Query: 354 LDPPDPQVVEDALSMLVQMHALEK 377
+DPP + AL +L + AL++
Sbjct: 592 MDPPPENALLKALELLYALGALDE 615
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 195/425 (45%), Gaps = 68/425 (16%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDEL-QEKGMAALKYKAIILDEV 60
V+ R LGE VG+ + E ++ ++F T+G+LL L ++ + + + + +DE+
Sbjct: 329 VSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNGVTH--VFVDEI 386
Query: 61 HERSVESDLVLVCVKQFLLKN-DIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSN 119
HER + D +++ +K+ L + D+R+VLMSAT + + +Y+ + IP
Sbjct: 387 HERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGG------APTIHIPGFT 440
Query: 120 QKTVFQRRVSYLEQVVESLGISSELMHSKDSHGL-------------------------- 153
+ +LE V+E G + D +G
Sbjct: 441 HPV----KAHFLEDVLEITGYKLTSFNQVDDYGQEKTWKTQKQLMPRKRKNQITTLVEEA 496
Query: 154 ----NPSTANARIKSELHT---------LIHALVLHIHVNEPDIEKSILVFLPTYN---S 197
N + N+R + L + LI A++ HI E ++LVFL ++ S
Sbjct: 497 LSKSNFESYNSRTRDSLSSWMPDCIGFNLIEAVLCHICRKER--PGAVLVFLTGWDDIRS 554
Query: 198 LAQQWRLLKPLESTFEVHIL--HRSIDT-EQALMAMKISKTHRKVILATNIAESSVTIPK 254
L+ Q + L V +L H S+ T EQ L+ + RK++LATN+AE+S+TI
Sbjct: 555 LSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITIND 614
Query: 255 VAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRGRTGRTCDGQVYRLVTGSFFNS 314
V +V+D ++ + +D W+S++ A QRRGR GR G+ Y L +++
Sbjct: 615 VVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDA 674
Query: 315 LEDHECPAILKLSLRLQVLSSCCAGSKAINDPKV--LLQKALDPPDPQVVEDALSMLVQM 372
+++ P +L+ L+S C K++ + L AL P+ V++A+ L +
Sbjct: 675 FAEYQLPELLRTP-----LNSLCLQIKSLQVESIAEFLSAALQAPESLAVQNAIGFLKMI 729
Query: 373 HALEK 377
AL++
Sbjct: 730 GALDE 734
>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
Length = 1299
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 116/219 (52%), Gaps = 20/219 (9%)
Query: 168 TLIHALVLHIHVNEPDIEKSILVFLPTYNSLAQ-QWRLLK-PL---ESTFEVHILHRSID 222
+LI L+ I + D +ILVFLP ++ + + + RLL+ P + F++ LH +
Sbjct: 536 SLIQQLMRKICGDSED--GAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVP 593
Query: 223 T-EQALMAMKISKTHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLV 281
EQ + + RK++LATNIAES+VTI V YVIDS R + +D +
Sbjct: 594 AGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 653
Query: 282 WVSKSQAEQRRGRTGRTCDGQVYRLVTGSFFNSLEDHECPAILK-----LSLRLQVLSSC 336
WVSK+ A+QR+GR GR G Y L + S+ D + P I + L L++++L
Sbjct: 654 WVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILDPN 713
Query: 337 CAGSKAINDPKVLLQKALDPPDPQVVEDALSMLVQMHAL 375
C ND LQK LDPP Q + +ALS+L + AL
Sbjct: 714 C----KTND---FLQKLLDPPVDQSIANALSILQDIGAL 745
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSAS----SKIVFKTAGVLLDELQEKG--MAALKYKAI 55
V++ C+ GE +G +IG++ + S +VF T G+LL L KG + I
Sbjct: 251 VSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSVSDITHI 310
Query: 56 ILDEVHERSVESDLVLVCVKQFLLKND-IRVVLMSATADISRYRDYF 101
I+DE+HER SD +L ++ L N +R++LMSAT D R+ YF
Sbjct: 311 IVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYF 357
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 176/379 (46%), Gaps = 45/379 (11%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDE-LQEKGMAALKYKAIILDEV 60
V++ + +LG+++GY I E ++ I + T GVLL E L++ + KY+ +++DE
Sbjct: 623 VSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLD--KYRVVVMDEA 680
Query: 61 HERSVESDLVLVCVKQFLL-KNDIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSN 119
HERS+ +D++ +K+ + + D ++++ SAT + ++ ++F V + IP
Sbjct: 681 HERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGS------VPIFNIPGRT 734
Query: 120 QKTVFQRRVSYLEQVVESLGISSELMHSKDSHG--LNPSTANARIKSELHTLIHALVLHI 177
+ E VE+ + +H G L T I++ +L + +
Sbjct: 735 FPVNILYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERMEQLV 794
Query: 178 HVNEPDIEKSILVFLPTYNSLAQQWRLLKPLESTFEVHILHRSIDTEQALMAMKISKTHR 237
+ +I + L+ LP Y+ L QA + K R
Sbjct: 795 SSSSREI--TNLLILPIYSQLPADL----------------------QAKIFQKPEDGAR 830
Query: 238 KVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRGRTGR 297
K I+ATNIAE+S+T+ + YVID+ ++ +A ++ +S++ ++QR GR GR
Sbjct: 831 KCIVATNIAETSLTVDGIYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGR 890
Query: 298 TCDGQVYRLVTGS-FFNSLEDHECPAILKLSLRLQVLSSCCAGSKAINDPKVLLQKALDP 356
T G YRL T S + N + P I + +L VL K++ +L +DP
Sbjct: 891 TGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLL-----LKSLKIDNLLDFDFMDP 945
Query: 357 PDPQVVEDALSMLVQMHAL 375
P PQ E+ L+ + Q+ L
Sbjct: 946 P-PQ--ENILNSMYQLWVL 961
>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
chr1:2040567-2047333 FORWARD LENGTH=1576
Length = 1576
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 22/204 (10%)
Query: 185 EKSILVFLPTYNSLAQQWRLLKPLESTFEVH-------ILHRSIDTE-QALMAMKISKTH 236
+ +ILVFLP + +++ L L+ F H LH + E Q + + +
Sbjct: 575 DGAILVFLPGWEEISKTKEKL--LDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGC 632
Query: 237 RKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRGRTG 296
RK++LATNIAES+VTI V YVIDS R + +D + WVSK+ A+QR GR G
Sbjct: 633 RKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAG 692
Query: 297 RTCDGQVYRLVTGSFFNSLEDHECPAILK-----LSLRLQVLSSCCAGSKAINDPKVLLQ 351
R G Y L + SL ++ P +++ L L++++L C +ND LQ
Sbjct: 693 RCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNC----NVND---FLQ 745
Query: 352 KALDPPDPQVVEDALSMLVQMHAL 375
K +DPP Q +E+AL +L + AL
Sbjct: 746 KLMDPPVAQSIENALIILKDIGAL 769
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 2 VAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDELQEKGM--AALKYKAIILDE 59
++ R +G VGY + + S +VF T G+LL L KG+ + II+DE
Sbjct: 285 ISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVNSSVPDITHIIVDE 344
Query: 60 VHERSVESDLVLVCVKQFLLKND-IRVVLMSATADISRYRDYF 101
+HER SD +L+ ++ L N +R++LMSAT D R+ +YF
Sbjct: 345 IHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYF 387
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 231 KISKTHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQ 290
++ K R V++ATN+AE+S+TIP + YV+D+ R +D E+ ++ W+S++ A Q
Sbjct: 667 EVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQ 726
Query: 291 RRGRTGRTCDGQVYRLVTGSFF-NSLEDHECPAILKLSLRLQVLSSCCAGSKAINDPKVL 349
R GR GRT G YRL + + F N E+ P I+K+ + +L K++N PKV
Sbjct: 727 RAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPVDGVILL-----MKSMNIPKVE 781
Query: 350 LQKALDPPDPQVVEDALSMLVQMHALEKT---TPRGR 383
PP+P + +A L + AL+ TP G+
Sbjct: 782 NFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGK 818
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 9 QLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDELQEKGMAALKYKAIILDEVHERSVESD 68
+LG+EVG+ + ++K +S I F T G+LL E+Q + +Y IILDE HERS+ +D
Sbjct: 319 RLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFLLR-RYSVIILDEAHERSLNTD 377
Query: 69 LVL 71
+++
Sbjct: 378 ILI 380
>AT5G56930.1 | Symbols: emb1789 | CCCH-type zinc finger family
protein | chr5:23027949-23030565 REVERSE LENGTH=675
Length = 675
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 645 CVYFIRGSCNRGNYCPFSHSLQAKRPQCKFFLSLQGCRNGESCLFSHV-TGRSAPST-ST 702
C YF SC +G+ CPF H L +K P C F++ C G+SCLFSH T +SA T S
Sbjct: 385 CCYFATQSCMKGDDCPFDHDL-SKYP-CNNFITKGFCYRGDSCLFSHKGTPQSASDTPSA 442
Query: 703 NV 704
NV
Sbjct: 443 NV 444