Miyakogusa Predicted Gene

Lj5g3v1627950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1627950.1 tr|B6U636|B6U636_MAIZE Catalytic/ oxidoreductase,
acting on NADH or NADPH OS=Zea mays PE=4
SV=1,51.04,1e-17,Complex1_LYR,Complex 1 LYR protein;
coiled-coil,NULL,CUFF.55641.1
         (108 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G62810.1 | Symbols:  | complex 1 family protein / LVR family ...   131   9e-32

>AT3G62810.1 | Symbols:  | complex 1 family protein / LVR family
           protein | chr3:23227763-23228180 FORWARD LENGTH=106
          Length = 106

 Score =  131 bits (330), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 65/106 (61%), Positives = 84/106 (79%), Gaps = 1/106 (0%)

Query: 3   MARGEVLSAYRAVLKATRKTFAGDGVMLKGSAAEVRKKFEENRNVSSEEEIQKLLGEASE 62
           M  GE L AYRA+L+AT+K+FAGD  MLK SA+E+RKKFEENR V+S  +I +LL EA E
Sbjct: 1   MVTGEALIAYRALLRATKKSFAGDTEMLKASASEIRKKFEENRLVASNSDITRLLEEARE 60

Query: 63  ASHFITNMLVQAQLNSDAGSYVMKPGKEHAGATLEIPTEEIIRKSS 108
           A+ FI+ M+VQA+LN + G Y MK  +EHAGATLE+P+EE++RK S
Sbjct: 61  ATQFISTMIVQAKLN-ERGGYEMKASQEHAGATLELPSEEMLRKKS 105