Miyakogusa Predicted Gene

Lj5g3v1615820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1615820.1 Non Chatacterized Hit- tr|I1L7U6|I1L7U6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2511
PE=,82.88,0,seg,NULL; FAD_binding_7,DNA photolyase,
FAD-binding/Cryptochrome, C-terminal; CRYPTOCHROME,NULL; no
,CUFF.55637.1
         (222 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G47590.1 | Symbols: PHR2 | photolyase/blue-light receptor 2 |...   295   2e-80
AT5G24850.1 | Symbols: CRY3 | cryptochrome 3 | chr5:8535399-8538...   103   1e-22

>AT2G47590.1 | Symbols: PHR2 | photolyase/blue-light receptor 2 |
           chr2:19521888-19523732 FORWARD LENGTH=447
          Length = 447

 Score =  295 bits (755), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 146/222 (65%), Positives = 171/222 (77%), Gaps = 8/222 (3%)

Query: 1   MKEENVEVKYFWGSTLYHVEDLPFQLEDMPSNYGGFRDRVQKLQIRNTIEALDQLKGLPK 60
           MKEE VEVKYFWGSTLYH++DLPF++ED+PSNYG F+D+VQKL+IR TI ALDQLK LP 
Sbjct: 234 MKEEGVEVKYFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQKLEIRKTIAALDQLKSLPS 293

Query: 61  RGDVEPGDIPSLMDLGLNSPAAMSQDGKPAASSTMVGGETEALQRLKRFAAELEAQPHKG 120
           RGDVE GDIPSL+DLG++     SQ+GKP    TMVGGETEAL RLK FAA+ +A+  KG
Sbjct: 294 RGDVELGDIPSLLDLGISPTPRTSQEGKP----TMVGGETEALTRLKSFAADCQARLSKG 349

Query: 121 SKNGTQDSIYGANFSCKISPWLAMGCLSPRTMFDELKKTTSRAIXXXXXXXXXXXXXXXX 180
           ++ G  +S++GANFSCKISPWLAMG +SPR+MFDELKKT S +                 
Sbjct: 350 NQKGGNNSVFGANFSCKISPWLAMGSISPRSMFDELKKTISAS----TTSTTPRNGPGDT 405

Query: 181 XXXWLMFELLWRDFFRFITKKYSSAKKQLEAAPVTACTGALA 222
              WLM+ELLWRDFFRFITKKYSSAK Q+EA P TACTGA A
Sbjct: 406 GLNWLMYELLWRDFFRFITKKYSSAKTQVEAGPATACTGAFA 447


>AT5G24850.1 | Symbols: CRY3 | cryptochrome 3 | chr5:8535399-8538016
           REVERSE LENGTH=526
          Length = 526

 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 107/199 (53%), Gaps = 28/199 (14%)

Query: 5   NVEVKYFWGSTLYHVEDLPFQLEDMPSNYGGFRDRVQ-KLQIRNTIEALDQLKGLPKRGD 63
           + +++  WGST+YH +DLPF + D+P  Y  FR  V+ K  IR++      L   P   D
Sbjct: 167 STKLELIWGSTMYHKDDLPFDVFDLPDVYTQFRKSVEAKCSIRSSTRIPLSLGPTPSVDD 226

Query: 64  VEPGDIPSLMDLGLNSPAAMSQDGKPAASSTMVGGETEALQRL-KRFAAELEAQPHKGSK 122
              GD+P+L  LG+  P  +++  +       VGGE+  + R+ + F  +   + +K ++
Sbjct: 227 W--GDVPTLEKLGV-EPQEVTRGMR------FVGGESAGVGRVFEYFWKKDLLKVYKETR 277

Query: 123 NGTQDSIYGANFSCKISPWLAMGCLSPRTMFDELKKTTSRAIXXXXXXXXXXXXXXXXXX 182
           NG    + G ++S K SPWLA GC+SPR +++E+++     +                  
Sbjct: 278 NG----MLGPDYSTKFSPWLAFGCISPRFIYEEVQRYEKERV-------------ANNST 320

Query: 183 XWLMFELLWRDFFRFITKK 201
            W++FEL+WRD+FRF++ K
Sbjct: 321 YWVLFELIWRDYFRFLSIK 339