Miyakogusa Predicted Gene

Lj5g3v1602410.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1602410.1 tr|I3SBE6|I3SBE6_LOTJA Ribosomal protein L19
OS=Lotus japonicus PE=2 SV=1,99.52,0,coiled-coil,NULL;
RIBOSOMAL_L19E,Ribosomal protein L19/L19e conserved site;
Ribosomal_L19e,Ribosomal,CUFF.55714.1
         (210 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02780.1 | Symbols: emb2386 | Ribosomal protein L19e family p...   318   2e-87
AT3G16780.1 | Symbols:  | Ribosomal protein L19e family protein ...   313   4e-86
AT4G02230.1 | Symbols:  | Ribosomal protein L19e family protein ...   312   9e-86
AT4G16030.1 | Symbols:  | Ribosomal protein L19e family protein ...    66   1e-11

>AT1G02780.1 | Symbols: emb2386 | Ribosomal protein L19e family
           protein | chr1:608120-609391 REVERSE LENGTH=214
          Length = 214

 Score =  318 bits (814), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 158/186 (84%), Positives = 168/186 (90%)

Query: 1   MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRL+ASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+              KYRE KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG 186
           LA+GPG
Sbjct: 181 LAKGPG 186


>AT3G16780.1 | Symbols:  | Ribosomal protein L19e family protein |
           chr3:5708982-5710249 FORWARD LENGTH=209
          Length = 209

 Score =  313 bits (803), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 156/186 (83%), Positives = 165/186 (88%)

Query: 1   MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRL+ASV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKI              KYRE+KKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPG 186
           LAQGPG
Sbjct: 181 LAQGPG 186


>AT4G02230.1 | Symbols:  | Ribosomal protein L19e family protein |
           chr4:979391-980640 REVERSE LENGTH=208
          Length = 208

 Score =  312 bits (800), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 156/186 (83%), Positives = 167/186 (89%)

Query: 1   MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRL++SVLKCG+ KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+              KYRE KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK+ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG 186
           LA+GPG
Sbjct: 181 LAKGPG 186


>AT4G16030.1 | Symbols:  | Ribosomal protein L19e family protein |
           chr4:9083482-9084103 FORWARD LENGTH=114
          Length = 114

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 65/134 (48%), Gaps = 33/134 (24%)

Query: 57  IHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYREAKKID 116
            HSRSRARR      K RH+GYGK   T EA                    K+   KKID
Sbjct: 6   FHSRSRARR------KCRHTGYGK--DTMEALRRIMKRLTRRLKMLKRLLKKFCWNKKID 57

Query: 117 KHMY-HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKNA 175
           K +Y HDM+MKVKG V+KNK VLMES+HKS                       SRERK +
Sbjct: 58  KLVYYHDMFMKVKGKVYKNKCVLMESMHKS-----------------------SRERKFS 94

Query: 176 RREERLAQGP-GEK 188
             E RLA  P GEK
Sbjct: 95  GSEMRLALEPEGEK 108